Header list of 1hbw.pdb file
Complete list - g 9 2 Bytes
HEADER TRANSCRIPTIONAL ACTIVATOR 20-APR-01 1HBW
TITLE SOLUTION NMR STRUCTURE OF THE DIMERIZATION DOMAIN OF THE YEAST
TITLE 2 TRANSCRIPTIONAL ACTIVATOR GAL4 (RESIDUES 50-106)
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: REGULATORY PROTEIN GAL4;
COMPND 3 CHAIN: A, B;
COMPND 4 FRAGMENT: DIMERIZATION DOMAIN RESIDUES 50-106;
COMPND 5 ENGINEERED: YES;
COMPND 6 MUTATION: YES
SOURCE MOL_ID: 1;
SOURCE 2 SYNTHETIC: YES;
SOURCE 3 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE;
SOURCE 4 ORGANISM_COMMON: YEAST;
SOURCE 5 ORGANISM_TAXID: 4932
KEYWDS TRANSCRIPTIONAL ACTIVATOR, GALACTOSE AND MELIBIOSE METABOLISM,
KEYWDS 2 DIMERIZATION DOMAIN, COILED-COIL DIMERIC
EXPDTA SOLUTION NMR
NUMMDL 17
AUTHOR P.HIDALGO,A.Z.ANSARI,P.SCHMIDT,B.HARE,N.SIMKOVIC,S.FARRELL,E.J.SHIN,
AUTHOR 2 M.PTASHNE,G.WAGNER
REVDAT 4 14-JUN-23 1HBW 1 REMARK
REVDAT 3 15-JAN-20 1HBW 1 REMARK ATOM
REVDAT 2 24-FEB-09 1HBW 1 VERSN
REVDAT 1 10-MAY-01 1HBW 0
JRNL AUTH P.HIDALGO,A.Z.ANSARI,P.SCHMIDT,B.HARE,N.SIMKOVICH,S.FARRELL,
JRNL AUTH 2 E.J.SHIN,M.PTASHNE,G.WAGNER
JRNL TITL RECRUITMENT OF THE TRANSCRIPTIONAL MACHINERY THROUGH GAL11P:
JRNL TITL 2 STRUCTURE AND INTERACTIONS OF THE GAL4 DIMERIZATION DOMAIN
JRNL REF GENES DEV. V. 15 1007 2001
JRNL REFN ISSN 0890-9369
JRNL PMID 11316794
JRNL DOI 10.1101/GAD.873901
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : CNS
REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS, GROSSE-
REMARK 3 KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU,READ, RICE,
REMARK 3 SIMONSON,WARREN
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: C2 SYMMETRY WAS ENFORCED IN THE
REMARK 3 STRUCTURE CALCULATIONS.
REMARK 4
REMARK 4 1HBW COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-APR-01.
REMARK 100 THE DEPOSITION ID IS D_1290005904.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 308
REMARK 210 PH : 7.4
REMARK 210 IONIC STRENGTH : 50 MM SODIUM PHOSPHATE
REMARK 210 PRESSURE : NULL
REMARK 210 SAMPLE CONTENTS : NULL
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : NOESY (1H; 13C; 15N); HNHA;
REMARK 210 HNHB; HNCA; HN(CO)CA
REMARK 210 SPECTROMETER FIELD STRENGTH : 750 MHZ; 600 MHZ; 500 MHZ; 400
REMARK 210 MHZ
REMARK 210 SPECTROMETER MODEL : UP 750; UP 400; AMX; INOVA
REMARK 210 SPECTROMETER MANUFACTURER : VARIAN; BRUKER
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : CNS
REMARK 210 METHOD USED : SIMULATED ANNEALING PROTOCOL
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 300
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 17
REMARK 210 CONFORMERS, SELECTION CRITERIA : LOWEST ENERGY AND MINIMAL NOE
REMARK 210 DERIVED DISTANCE RESTRAINTS
REMARK 210 VIOLATIONS
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1
REMARK 210
REMARK 210 REMARK: NULL
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 400
REMARK 400 COMPOUND
REMARK 400 CHAIN A, B ENGINEERED MUTATION GLN87ARG, LYS90GLU
REMARK 400 GAL4 IS A POSITIVE REGULATOR FOR THE GALACTOSE-INDUCED GENES
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 1 ALA A 52 -162.61 -176.84
REMARK 500 1 HIS A 53 153.51 65.23
REMARK 500 1 LEU A 54 -137.52 64.26
REMARK 500 1 THR A 55 -84.94 27.94
REMARK 500 1 ARG A 60 -73.85 -73.04
REMARK 500 1 PHE A 68 175.65 63.76
REMARK 500 1 LEU A 69 -66.90 -129.71
REMARK 500 1 ILE A 71 -58.05 -128.18
REMARK 500 1 ARG A 74 -53.06 -177.57
REMARK 500 1 GLU A 75 118.22 -175.99
REMARK 500 1 ASP A 76 -63.91 -159.08
REMARK 500 1 ASP A 78 -34.04 -130.94
REMARK 500 1 PHE A 97 75.84 38.78
REMARK 500 1 VAL A 102 -45.57 -148.42
REMARK 500 1 ASN A 103 -175.75 64.85
REMARK 500 1 ASP A 105 113.37 61.28
REMARK 500 1 ARG B 51 36.96 -157.61
REMARK 500 1 ALA B 52 -162.67 -176.73
REMARK 500 1 HIS B 53 153.66 65.38
REMARK 500 1 LEU B 54 -137.50 64.13
REMARK 500 1 THR B 55 -84.83 27.88
REMARK 500 1 ARG B 60 -73.66 -73.24
REMARK 500 1 PHE B 68 175.64 63.81
REMARK 500 1 LEU B 69 -67.57 -129.59
REMARK 500 1 ILE B 71 -58.12 -128.27
REMARK 500 1 ARG B 74 -54.68 -177.66
REMARK 500 1 ASP B 76 114.46 68.93
REMARK 500 1 LEU B 77 47.62 -101.64
REMARK 500 1 PHE B 97 75.79 38.80
REMARK 500 1 VAL B 102 -45.71 -148.49
REMARK 500 1 ASN B 103 -175.70 64.90
REMARK 500 1 ASP B 105 113.41 61.35
REMARK 500 2 ARG A 51 -41.42 -170.33
REMARK 500 2 LEU A 54 -80.95 64.47
REMARK 500 2 THR A 55 -90.50 6.54
REMARK 500 2 GLU A 56 -70.05 -44.46
REMARK 500 2 ARG A 60 -74.03 -73.38
REMARK 500 2 PHE A 68 -165.57 72.34
REMARK 500 2 LEU A 69 -33.05 86.88
REMARK 500 2 LEU A 77 -80.05 -103.13
REMARK 500 2 ASP A 78 -57.58 71.85
REMARK 500 2 LEU A 86 -41.72 -169.76
REMARK 500 2 PHE A 97 139.56 -36.69
REMARK 500 2 ASN A 103 92.18 42.92
REMARK 500 2 ASP A 105 33.40 -96.58
REMARK 500 2 ARG B 51 -78.53 -123.23
REMARK 500 2 LEU B 54 -80.85 64.32
REMARK 500 2 THR B 55 -90.47 6.39
REMARK 500 2 GLU B 56 -70.17 -44.35
REMARK 500 2 ARG B 60 -74.00 -73.46
REMARK 500
REMARK 500 THIS ENTRY HAS 465 RAMACHANDRAN OUTLIERS.
REMARK 500
REMARK 500 REMARK: NULL
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 1AW6 RELATED DB: PDB
REMARK 900 GAL4 (CD), NMR, 24 STRUCTURES
REMARK 900 RELATED ID: 1D66 RELATED DB: PDB
REMARK 900 GAL4 (RESIDUES 1 - 65) COMPLEX WITH 19MER DEOXYRIBONUCLEIC ACID
REMARK 900 RELATED ID: 5180 RELATED DB: BMRB
DBREF 1HBW A 50 106 UNP P04386 GAL4_YEAST 50 106
DBREF 1HBW B 50 106 UNP P04386 GAL4_YEAST 50 106
SEQADV 1HBW ARG A 87 UNP P04386 GLN 87 ENGINEERED MUTATION
SEQADV 1HBW ARG B 87 UNP P04386 GLN 87 ENGINEERED MUTATION
SEQADV 1HBW GLU A 90 UNP P04386 LYS 90 ENGINEERED MUTATION
SEQADV 1HBW GLU B 90 UNP P04386 LYS 90 ENGINEERED MUTATION
SEQRES 1 A 57 THR ARG ALA HIS LEU THR GLU VAL GLU SER ARG LEU GLU
SEQRES 2 A 57 ARG LEU GLU GLN LEU PHE LEU LEU ILE PHE PRO ARG GLU
SEQRES 3 A 57 ASP LEU ASP MET ILE LEU LYS MET ASP SER LEU ARG ASP
SEQRES 4 A 57 ILE GLU ALA LEU LEU THR GLY LEU PHE VAL GLN ASP ASN
SEQRES 5 A 57 VAL ASN LYS ASP ALA
SEQRES 1 B 57 THR ARG ALA HIS LEU THR GLU VAL GLU SER ARG LEU GLU
SEQRES 2 B 57 ARG LEU GLU GLN LEU PHE LEU LEU ILE PHE PRO ARG GLU
SEQRES 3 B 57 ASP LEU ASP MET ILE LEU LYS MET ASP SER LEU ARG ASP
SEQRES 4 B 57 ILE GLU ALA LEU LEU THR GLY LEU PHE VAL GLN ASP ASN
SEQRES 5 B 57 VAL ASN LYS ASP ALA
HELIX 1 1 THR A 55 GLN A 66 1 12
HELIX 2 2 ASP A 78 ASP A 84 1 7
HELIX 3 3 ARG A 87 PHE A 97 1 11
HELIX 4 4 THR B 55 GLN B 66 1 12
HELIX 5 5 ASP B 78 ASP B 84 1 7
HELIX 6 6 ARG B 87 PHE B 97 1 11
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - g 9 2 Bytes