Header list of 1h9f.pdb file
Complete list - 13 20 Bytes
HEADER MEMBRANE PROTEIN 09-MAR-01 1H9F
TITLE LEM DOMAIN OF HUMAN INNER NUCLEAR MEMBRANE PROTEIN LAP2
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: LAMINA-ASSOCIATED POLYPEPTIDE 2, ISOFORM ALPHA;
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: LEM DOMAIN (103-159);
COMPND 5 SYNONYM: THYMOPOIETIN ISOFORM ALPHA,TP ALPHA,THYMOPOIETIN-RELATED
COMPND 6 PEPTIDE ISOFORM ALPHA,TPRP ISOFORM ALPHA;
COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 SYNTHETIC: YES;
SOURCE 3 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 4 ORGANISM_COMMON: HUMAN;
SOURCE 5 ORGANISM_TAXID: 9606
KEYWDS MEMBRANE PROTEIN, INNER NUCLEAR MEMBRANE PROTEIN, LAMINA-ASSOCIATED
KEYWDS 2 POLYPEPTIDE, EMERIN, LEM DOMAIN
EXPDTA SOLUTION NMR
NUMMDL 10
AUTHOR C.LAGURI,B.GILQUIN,N.WOLFF,R.ROMI-LEBRUN,K.COURCHAY,I.CALLEBAUT,
AUTHOR 2 H.J.WORMAN,S.ZINN-JUSTIN
REVDAT 4 13-JUN-18 1H9F 1 COMPND SOURCE DBREF
REVDAT 3 14-JUN-17 1H9F 1 REMARK
REVDAT 2 24-FEB-09 1H9F 1 VERSN
REVDAT 1 17-JUN-01 1H9F 0
JRNL AUTH C.LAGURI,B.GILQUIN,N.WOLFF,R.ROMI-LEBRUN,K.COURCHAY,
JRNL AUTH 2 I.CALLEBAUT,H.J.WORMAN,S.ZINN-JUSTIN
JRNL TITL STRUCTURAL CHARACTERIZATION OF THE LEM MOTIF COMMON TO THREE
JRNL TITL 2 HUMAN INNER NUCLEAR MEMBRANE PROTEINS
JRNL REF STRUCTURE V. 9 503 2001
JRNL REFN ISSN 0969-2126
JRNL PMID 11435115
JRNL DOI 10.1016/S0969-2126(01)00611-6
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : X-PLOR 3.1
REMARK 3 AUTHORS : BRUNGER
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 1H9F COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 09-MAR-01.
REMARK 100 THE DEPOSITION ID IS D_1290005983.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 298
REMARK 210 PH : 6.3
REMARK 210 IONIC STRENGTH : 20
REMARK 210 PRESSURE : 1 ATM
REMARK 210 SAMPLE CONTENTS : NULL
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : COSY; TOCSY; NOESY; ROESY
REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 600 MHZ
REMARK 210 SPECTROMETER MODEL : DRX
REMARK 210 SPECTROMETER MANUFACTURER : BRUKER
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : X-PLOR
REMARK 210 METHOD USED : SIMULATED ANNEALING
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 200
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10
REMARK 210 CONFORMERS, SELECTION CRITERIA : LOWER ENERGY
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 2
REMARK 210
REMARK 210 REMARK: NULL
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 1 GLU A 3 101.56 50.22
REMARK 500 1 ASP A 4 139.46 60.11
REMARK 500 1 ASP A 9 89.78 -54.61
REMARK 500 1 LEU A 13 160.24 -34.48
REMARK 500 1 ILE A 32 53.69 -96.55
REMARK 500 1 VAL A 33 177.63 -48.67
REMARK 500 1 ARG A 48 13.42 -141.08
REMARK 500 1 THR A 52 -55.14 -171.39
REMARK 500 1 GLU A 53 -132.09 -116.14
REMARK 500 2 GLN A 2 -39.01 -133.07
REMARK 500 2 ASP A 4 -169.31 45.39
REMARK 500 2 LYS A 5 -59.14 -127.85
REMARK 500 2 ASP A 6 41.34 -83.03
REMARK 500 2 LEU A 8 -175.86 -50.12
REMARK 500 2 LEU A 13 154.49 -33.83
REMARK 500 2 LEU A 22 -63.53 -92.83
REMARK 500 2 VAL A 23 -18.68 -44.33
REMARK 500 2 VAL A 33 175.82 -49.57
REMARK 500 2 SER A 54 52.42 76.54
REMARK 500 2 ARG A 55 76.90 -103.36
REMARK 500 3 ASP A 4 -39.77 -36.89
REMARK 500 3 LYS A 5 -66.94 81.17
REMARK 500 3 ASP A 6 39.14 -81.04
REMARK 500 3 THR A 11 -59.24 -128.99
REMARK 500 3 LEU A 13 164.59 -42.05
REMARK 500 3 LEU A 22 -60.96 -91.06
REMARK 500 3 VAL A 23 -13.33 -49.00
REMARK 500 3 PRO A 31 44.95 -80.11
REMARK 500 3 LYS A 38 -30.71 -36.40
REMARK 500 3 GLN A 50 129.24 -14.48
REMARK 500 3 THR A 52 -78.79 -117.12
REMARK 500 3 SER A 54 -43.07 83.33
REMARK 500 3 ARG A 55 -151.79 33.11
REMARK 500 3 SER A 56 27.46 43.73
REMARK 500 4 GLU A 3 112.68 58.80
REMARK 500 4 ASP A 6 42.82 -84.93
REMARK 500 4 VAL A 10 -12.09 66.57
REMARK 500 4 LEU A 13 125.65 -27.81
REMARK 500 4 VAL A 33 175.98 -47.12
REMARK 500 4 GLN A 50 -154.40 41.73
REMARK 500 4 SER A 54 -141.17 47.46
REMARK 500 4 ARG A 55 74.99 60.46
REMARK 500 5 GLN A 2 -169.68 43.44
REMARK 500 5 GLU A 3 -90.67 -151.92
REMARK 500 5 ASP A 4 -33.72 -177.21
REMARK 500 5 LYS A 5 -65.89 81.84
REMARK 500 5 VAL A 10 17.21 42.01
REMARK 500 5 THR A 11 -56.33 -136.37
REMARK 500 5 LEU A 13 161.15 -37.42
REMARK 500 5 ILE A 32 64.15 -102.68
REMARK 500
REMARK 500 THIS ENTRY HAS 111 RAMACHANDRAN OUTLIERS.
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: PLANAR GROUPS
REMARK 500
REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL
REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE
REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN
REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS
REMARK 500 AN RMSD GREATER THAN THIS VALUE
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 M RES CSSEQI RMS TYPE
REMARK 500 1 ARG A 1 0.16 SIDE CHAIN
REMARK 500 1 ARG A 37 0.17 SIDE CHAIN
REMARK 500 1 ARG A 48 0.31 SIDE CHAIN
REMARK 500 1 ARG A 55 0.11 SIDE CHAIN
REMARK 500 2 ARG A 1 0.24 SIDE CHAIN
REMARK 500 2 ARG A 37 0.17 SIDE CHAIN
REMARK 500 2 ARG A 55 0.21 SIDE CHAIN
REMARK 500 3 ARG A 1 0.18 SIDE CHAIN
REMARK 500 3 ARG A 37 0.31 SIDE CHAIN
REMARK 500 3 ARG A 55 0.27 SIDE CHAIN
REMARK 500 4 ARG A 1 0.24 SIDE CHAIN
REMARK 500 4 ARG A 37 0.18 SIDE CHAIN
REMARK 500 4 ARG A 48 0.15 SIDE CHAIN
REMARK 500 4 ARG A 55 0.24 SIDE CHAIN
REMARK 500 5 ARG A 1 0.20 SIDE CHAIN
REMARK 500 5 ARG A 37 0.16 SIDE CHAIN
REMARK 500 5 ARG A 48 0.11 SIDE CHAIN
REMARK 500 5 ARG A 55 0.15 SIDE CHAIN
REMARK 500 6 ARG A 1 0.32 SIDE CHAIN
REMARK 500 6 ARG A 37 0.18 SIDE CHAIN
REMARK 500 6 ARG A 48 0.31 SIDE CHAIN
REMARK 500 6 ARG A 55 0.10 SIDE CHAIN
REMARK 500 7 ARG A 1 0.28 SIDE CHAIN
REMARK 500 7 ARG A 37 0.17 SIDE CHAIN
REMARK 500 7 ARG A 48 0.11 SIDE CHAIN
REMARK 500 7 ARG A 55 0.14 SIDE CHAIN
REMARK 500 8 ARG A 1 0.21 SIDE CHAIN
REMARK 500 8 ARG A 37 0.16 SIDE CHAIN
REMARK 500 8 ARG A 48 0.29 SIDE CHAIN
REMARK 500 8 ARG A 55 0.32 SIDE CHAIN
REMARK 500 9 ARG A 1 0.30 SIDE CHAIN
REMARK 500 9 ARG A 37 0.17 SIDE CHAIN
REMARK 500 9 ARG A 48 0.28 SIDE CHAIN
REMARK 500 9 ARG A 55 0.31 SIDE CHAIN
REMARK 500 10 ARG A 1 0.15 SIDE CHAIN
REMARK 500 10 ARG A 37 0.17 SIDE CHAIN
REMARK 500 10 ARG A 48 0.08 SIDE CHAIN
REMARK 500 10 ARG A 55 0.26 SIDE CHAIN
REMARK 500
REMARK 500 REMARK: NULL
REMARK 650
REMARK 650 HELIX
REMARK 650 DETERMINATION METHOD: RAMACHANDRAN
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 1H9E RELATED DB: PDB
REMARK 900 LEM-LIKE DOMAIN OF HUMAN INNER NUCLEAR MEMBRANE PROTEIN LAP2
REMARK 900 RELATED ID: 5043 RELATED DB: BMRB
DBREF 1H9F A 1 57 UNP P42166 LAP2A_HUMAN 103 159
SEQRES 1 A 57 ARG GLN GLU ASP LYS ASP ASP LEU ASP VAL THR GLU LEU
SEQRES 2 A 57 THR ASN GLU ASP LEU LEU ASP GLN LEU VAL LYS TYR GLY
SEQRES 3 A 57 VAL ASN PRO GLY PRO ILE VAL GLY THR THR ARG LYS LEU
SEQRES 4 A 57 TYR GLU LYS LYS LEU LEU LYS LEU ARG GLU GLN GLY THR
SEQRES 5 A 57 GLU SER ARG SER SER
HELIX 1 H1 ASP A 9 GLU A 12 1 4
HELIX 2 H2 ASN A 15 TYR A 25 1 11
HELIX 3 H3 GLY A 34 LEU A 47 1 14
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - 13 20 Bytes