Header list of 1go0.pdb file
Complete list - n 15 2 Bytes
HEADER RIBOSOMAL PROTEIN 15-OCT-01 1GO0
TITLE NMR STRUCTURE OF RIBOSOMAL PROTEIN L30E FROM THERMOCOCCUS CELER
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: 50S RIBOSOMAL PROTEIN L30E;
COMPND 3 CHAIN: A;
COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: THERMOCOCCUS CELER;
SOURCE 3 ORGANISM_TAXID: 2264;
SOURCE 4 ATCC: 35543;
SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3);
SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008;
SOURCE 7 EXPRESSION_SYSTEM_VARIANT: C41;
SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PRSET-A
KEYWDS RIBOSOMAL PROTEIN, RNA-BINDING, RIBOSOME, THERMOPHILIC
EXPDTA SOLUTION NMR
NUMMDL 10
AUTHOR S.-H.CHAN,M.BYCROFT,S.M.V.FREUND,K.-B.WONG
REVDAT 5 15-JAN-20 1GO0 1 REMARK
REVDAT 4 24-JAN-18 1GO0 1 SOURCE
REVDAT 3 24-FEB-09 1GO0 1 VERSN
REVDAT 2 04-JUL-03 1GO0 1 JRNL
REVDAT 1 12-JUN-03 1GO0 0
JRNL AUTH K.-B.WONG,C.-F.LEE,S.-H.CHAN,T.-Y.LEUNG,Y.W.CHEN,M.BYCROFT
JRNL TITL SOLUTION STRUCTURE AND THERMAL STABILITY OF RIBOSOMAL
JRNL TITL 2 PROTEIN L30E FROM HYPERTHERMOPHILIC ARCHAEON THERMOCOCCUS
JRNL TITL 3 CELER
JRNL REF PROTEIN SCI. V. 12 1483 2003
JRNL REFN ISSN 0961-8368
JRNL PMID 12824494
JRNL DOI 10.1110/PS.0302303
REMARK 1
REMARK 1 REFERENCE 1
REMARK 1 AUTH N.BAN,P.NISSEN,J.HANSEN,P.B.MOORE,T.A.STEITZ
REMARK 1 TITL THE COMPLETE ATOMIC STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT
REMARK 1 TITL 2 AT 2.4 A RESOLUTION
REMARK 1 REF SCIENCE V. 289 905 2000
REMARK 1 REFN ISSN 0036-8075
REMARK 1 PMID 10937989
REMARK 1 DOI 10.1126/SCIENCE.289.5481.905
REMARK 1 REFERENCE 2
REMARK 1 AUTH H.MAO,J.R.WILLAMSON
REMARK 1 TITL LOCAL FOLDING COUPLED TO RNA BINDING IN THE YEAST RIBOSOMAL
REMARK 1 TITL 2 PROTEIN L30
REMARK 1 REF J.MOL.BIOL. V. 292 345 1999
REMARK 1 REFN ISSN 0022-2836
REMARK 1 PMID 10493880
REMARK 1 DOI 10.1006/JMBI.1999.3044
REMARK 1 REFERENCE 3
REMARK 1 AUTH H.MAO,S.A.WHITE,J.R.WILLAMSON
REMARK 1 TITL A NOVEL LOOP-LOOP RECOGNITION MOTIF IN THE YEAST RIBOSOMAL
REMARK 1 TITL 2 PROTEIN L30 AUTOREGULATORY RNA COMPLEX
REMARK 1 REF NAT.STRUCT.BIOL. V. 6 1139 1999
REMARK 1 REFN ISSN 1072-8368
REMARK 1 PMID 10581556
REMARK 1 DOI 10.1038/70081
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : CNS 1.1
REMARK 3 AUTHORS : BRUNGER ET AL., LINGE ET AL.
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 1GO0 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-OCT-01.
REMARK 100 THE DEPOSITION ID IS D_1290008700.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 310
REMARK 210 PH : 5.6
REMARK 210 IONIC STRENGTH : NULL
REMARK 210 PRESSURE : AMBIENT
REMARK 210 SAMPLE CONTENTS : 20MM SODIUM ACETATE, 0.5M NA2SO4
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : NOESY; TOCSY; 15N-NOESY-HSQC;
REMARK 210 13C-NOESY-HSQC; 13C-HSQC-NOESY-
REMARK 210 HSQC; HNCA; HN(CO)CA; HNCACB;
REMARK 210 CBCA(CO)NH; HCCH-TOCSY
REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 600 MHZ
REMARK 210 SPECTROMETER MODEL : AMX; DRX
REMARK 210 SPECTROMETER MANUFACTURER : BRUKER
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : NMRPIPE, NMRVIEW, CNS, ARIA
REMARK 210 METHOD USED : SIMULATED ANNEALING USING
REMARK 210 AMBIGUOUS NOES
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 400
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10
REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST
REMARK 210 ENERGY
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1
REMARK 210
REMARK 210 REMARK: THE STRUCTUER WAS DETERMINED USING TRIPLE-RESONANCE NMR
REMARK 210 EXPERIMENTS ON 13C/15N LABELLED SAMPLE
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 400
REMARK 400 COMPOUND
REMARK 400 MEMBER OF THE L30E FAMILY OF RIBOSOMAL PROTEINS.
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 1 ALA A 20 -61.54 -164.82
REMARK 500 1 MET A 29 24.06 -147.53
REMARK 500 1 ASN A 40 35.21 -88.81
REMARK 500 1 PRO A 77 43.20 -76.54
REMARK 500 1 HIS A 78 34.44 -144.79
REMARK 500 1 THR A 79 73.16 47.88
REMARK 500 2 PHE A 3 -50.99 72.66
REMARK 500 2 ASN A 40 31.68 -88.56
REMARK 500 2 PRO A 77 42.16 -75.00
REMARK 500 2 ASP A 87 75.32 -118.64
REMARK 500 2 PRO A 88 47.93 -92.46
REMARK 500 2 ARG A 92 32.31 -87.27
REMARK 500 3 SER A -1 39.28 -81.47
REMARK 500 3 PHE A 3 -51.17 73.75
REMARK 500 3 ALA A 20 -57.96 -160.81
REMARK 500 3 ASN A 40 42.86 -80.53
REMARK 500 3 HIS A 78 46.72 -83.16
REMARK 500 3 THR A 79 170.01 55.24
REMARK 500 3 PRO A 88 41.09 -96.15
REMARK 500 3 ARG A 92 33.30 -98.72
REMARK 500 3 LYS A 99 -51.83 69.50
REMARK 500 4 PHE A 3 42.06 -73.41
REMARK 500 4 PRO A 77 42.25 -78.75
REMARK 500 4 PRO A 88 48.63 -86.23
REMARK 500 4 ARG A 92 41.10 -97.29
REMARK 500 5 SER A -1 47.86 -79.17
REMARK 500 5 VAL A 1 -120.41 54.05
REMARK 500 5 PRO A 77 38.48 -69.87
REMARK 500 5 HIS A 78 140.34 -172.57
REMARK 500 5 ARG A 92 44.85 -104.03
REMARK 500 6 PHE A 3 -54.37 71.67
REMARK 500 6 ALA A 20 -112.60 59.79
REMARK 500 6 ASN A 40 33.32 -84.76
REMARK 500 6 GLU A 64 49.65 -77.22
REMARK 500 6 PRO A 77 47.95 -76.48
REMARK 500 6 ARG A 92 49.69 -100.39
REMARK 500 7 VAL A 1 -147.25 41.08
REMARK 500 7 ASP A 2 129.46 -171.31
REMARK 500 7 PHE A 3 26.91 -166.85
REMARK 500 7 GLU A 64 48.65 -75.68
REMARK 500 7 PRO A 77 41.33 -73.37
REMARK 500 7 ARG A 92 36.09 -87.73
REMARK 500 8 ASP A 2 -44.61 -149.88
REMARK 500 8 ALA A 20 -59.71 -165.09
REMARK 500 8 ASN A 40 40.74 -92.78
REMARK 500 8 SER A 56 -140.08 -83.41
REMARK 500 8 PRO A 77 45.26 -77.68
REMARK 500 8 THR A 79 89.12 -67.79
REMARK 500 8 ARG A 92 45.71 -77.79
REMARK 500 8 LYS A 99 117.71 -173.60
REMARK 500
REMARK 500 THIS ENTRY HAS 61 RAMACHANDRAN OUTLIERS.
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: PLANAR GROUPS
REMARK 500
REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL
REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE
REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN
REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS
REMARK 500 AN RMSD GREATER THAN THIS VALUE
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 M RES CSSEQI RMS TYPE
REMARK 500 7 TYR A 52 0.06 SIDE CHAIN
REMARK 500 8 TYR A 52 0.06 SIDE CHAIN
REMARK 500
REMARK 500 REMARK: NULL
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 1GO1 RELATED DB: PDB
REMARK 900 NMR STRUCTURE OF RIBOSOMAL PROTEIN L30E FROM THERMOCOCCUS CELER.
REMARK 900 RELATED ID: 1H7M RELATED DB: PDB
REMARK 900 CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN L30E FROM THERMOCOCCUS CELER.
REMARK 900 RELATED ID: 5485 RELATED DB: BMRB
DBREF 1GO0 A -2 -1 PDB 1GO0 1GO0 -2 -1
DBREF 1GO0 A 1 100 UNP P29160 RL3E_THECE 2 101
SEQRES 1 A 102 GLY SER VAL ASP PHE ALA PHE GLU LEU ARG LYS ALA GLN
SEQRES 2 A 102 ASP THR GLY LYS ILE VAL MET GLY ALA ARG LYS SER ILE
SEQRES 3 A 102 GLN TYR ALA LYS MET GLY GLY ALA LYS LEU ILE ILE VAL
SEQRES 4 A 102 ALA ARG ASN ALA ARG PRO ASP ILE LYS GLU ASP ILE GLU
SEQRES 5 A 102 TYR TYR ALA ARG LEU SER GLY ILE PRO VAL TYR GLU PHE
SEQRES 6 A 102 GLU GLY THR SER VAL GLU LEU GLY THR LEU LEU GLY ARG
SEQRES 7 A 102 PRO HIS THR VAL SER ALA LEU ALA VAL VAL ASP PRO GLY
SEQRES 8 A 102 GLU SER ARG ILE LEU ALA LEU GLY GLY LYS GLU
HELIX 1 1 ASP A 2 THR A 13 1 12
HELIX 2 2 ALA A 20 GLY A 30 1 11
HELIX 3 3 ARG A 42 GLY A 57 1 16
HELIX 4 4 THR A 66 GLY A 75 1 10
HELIX 5 5 ARG A 92 LEU A 96 5 5
SHEET 1 AA 4 LYS A 15 GLY A 19 0
SHEET 2 AA 4 ALA A 82 ASP A 87 -1 O ALA A 82 N GLY A 19
SHEET 3 AA 4 LEU A 34 ALA A 38 -1 O LEU A 34 N VAL A 85
SHEET 4 AA 4 VAL A 60 PHE A 63 1 O TYR A 61 N VAL A 37
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - n 15 2 Bytes