Header list of 1etf.pdb file
Complete list - 16 20 Bytes
HEADER VIRAL PROTEIN/RNA 28-AUG-96 1ETF TITLE REV RESPONSE ELEMENT (RRE) RNA COMPLEXED WITH REV PEPTIDE, NMR, TITLE 2 MINIMIZED AVERAGE STRUCTURE COMPND MOL_ID: 1; COMPND 2 MOLECULE: REV RESPONSE ELEMENT RNA; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: REV PEPTIDE; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 MOL_ID: 2; SOURCE 4 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS 1; SOURCE 5 ORGANISM_TAXID: 11676; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS COMPLEX (RNA-PEPTIDE), EXPORT REGULATOR, MRNA SPLICING, TRANSCRIPTION KEYWDS 2 REGULATION, VIRAL PROTEIN-RNA COMPLEX EXPDTA SOLUTION NMR AUTHOR J.L.BATTISTE,H.MAO,N.S.RAO,R.TAN,D.R.MUHANDIRAM,L.E.KAY,A.D.FRANKEL, AUTHOR 2 J.R.WILLAMSON REVDAT 3 16-FEB-22 1ETF 1 REMARK SEQADV REVDAT 2 24-FEB-09 1ETF 1 VERSN REVDAT 1 12-MAR-97 1ETF 0 JRNL AUTH J.L.BATTISTE,H.MAO,N.S.RAO,R.TAN,D.R.MUHANDIRAM,L.E.KAY, JRNL AUTH 2 A.D.FRANKEL,J.R.WILLIAMSON JRNL TITL ALPHA HELIX-RNA MAJOR GROOVE RECOGNITION IN AN HIV-1 REV JRNL TITL 2 PEPTIDE-RRE RNA COMPLEX. JRNL REF SCIENCE V. 273 1547 1996 JRNL REFN ISSN 0036-8075 JRNL PMID 8703216 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.L.BATTISTE,R.TAN,A.D.FRANKEL,J.R.WILLIAMSON REMARK 1 TITL ASSIGNMENT AND MODELING OF THE REV RESPONSE ELEMENT RNA REMARK 1 TITL 2 BOUND TO A REV PEPTIDE USING 13C-HETERONUCLEAR NMR REMARK 1 REF J.BIOMOL.NMR V. 6 375 1995 REMARK 1 REFN ISSN 0925-2738 REMARK 1 REFERENCE 2 REMARK 1 AUTH J.L.BATTISTE,R.TAN,A.D.FRANKEL,J.R.WILLIAMSON REMARK 1 TITL BINDING OF AN HIV REV PEPTIDE TO REV RESPONSIVE ELEMENT RNA REMARK 1 TITL 2 INDUCES FORMATION OF PURINE-PURINE BASE PAIRS REMARK 1 REF BIOCHEMISTRY V. 33 2741 1994 REMARK 1 REFN ISSN 0006-2960 REMARK 1 REFERENCE 3 REMARK 1 AUTH R.TAN,L.CHEN,J.A.BUETTNER,D.HUDSON,A.D.FRANKEL REMARK 1 TITL RNA RECOGNITION BY AN ISOLATED ALPHA HELIX REMARK 1 REF CELL(CAMBRIDGE,MASS.) V. 73 1031 1993 REMARK 1 REFN ISSN 0092-8674 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : INSIGHT/DISCOVER REMARK 3 AUTHORS : BIOSYM REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1ETF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000173160. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : NULL REMARK 210 PH : NULL REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : NULL REMARK 210 SPECTROMETER MODEL : NULL REMARK 210 SPECTROMETER MANUFACTURER : NULL REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 1 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HO2' G A 50 H5' C A 51 1.16 REMARK 500 HO2' G A 77 H5' C A 78 1.19 REMARK 500 O2' A A 58 H5' G A 64 1.28 REMARK 500 H3' G A 70 H2' G A 71 1.31 REMARK 500 N7 G A 47 HB3 GLN B 36 1.33 REMARK 500 HO2' C A 56 H8 A A 57 1.33 REMARK 500 HO2' U A 43 H5' C A 44 1.34 REMARK 500 O4 U A 45 HH21 ARG B 44 1.38 REMARK 500 O GLN B 36 H ASN B 40 1.46 REMARK 500 O ARG B 38 H ARG B 42 1.48 REMARK 500 N7 G A 47 HD22 ASN B 40 1.51 REMARK 500 O GLU B 47 HB3 ARG B 50 1.52 REMARK 500 O ARG B 44 H ARG B 48 1.53 REMARK 500 O ALA B 51 H ARG B 55 1.54 REMARK 500 O GLN B 49 H ALA B 53 1.56 REMARK 500 O ARG B 35 HG2 ARG B 39 1.59 REMARK 500 O4 U A 45 NH2 ARG B 44 1.71 REMARK 500 O6 G A 47 OD1 ASN B 40 2.00 REMARK 500 OP2 U A 72 NH2 ARG B 46 2.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU B 47 CD GLU B 47 OE2 0.113 REMARK 500 ARG B 55 C ARG B 55 OXT 0.135 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 C A 56 O4' - C1' - N1 ANGL. DEV. = 5.0 DEGREES REMARK 500 ARG B 46 CB - CG - CD ANGL. DEV. = 18.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 A A 68 0.05 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1ETG RELATED DB: PDB REMARK 900 ENSEMBLE OF 19 STRUCTURES DBREF 1ETF B 33 55 UNP P05866 REV_HV1W2 7 29 DBREF 1ETF A 41 79 PDB 1ETF 1ETF 41 79 SEQADV 1ETF ASP B 33 UNP P05866 GLY 7 CONFLICT SEQADV 1ETF ALA B 51 UNP P05866 GLN 25 CONFLICT SEQADV 1ETF ALA B 52 UNP P05866 ILE 26 CONFLICT SEQADV 1ETF ALA B 53 UNP P05866 ARG 27 CONFLICT SEQADV 1ETF ALA B 54 UNP P05866 SER 28 CONFLICT SEQADV 1ETF ARG B 55 UNP P05866 ILE 29 CONFLICT SEQRES 1 A 34 G G U C U G G G C G C A G SEQRES 2 A 34 C G C A A G C U G A C G G SEQRES 3 A 34 U A C A G G C C SEQRES 1 B 23 ASP THR ARG GLN ALA ARG ARG ASN ARG ARG ARG ARG TRP SEQRES 2 B 23 ARG GLU ARG GLN ARG ALA ALA ALA ALA ARG HELIX 1 1 ARG B 35 ALA B 53 1 19 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000
Complete list - 16 20 Bytes