Header list of 1emz.pdb file
Complete list - 16 202 Bytes
HEADER VIRAL PROTEIN 20-MAR-00 1EMZ
TITLE SOLUTION STRUCTURE OF FRAGMENT (350-370) OF THE TRANSMEMBRANE DOMAIN
TITLE 2 OF HEPATITIS C ENVELOPE GLYCOPROTEIN E1
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: ENVELOPE GLYCOPROTEIN E1;
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: TRANSMEMBRANE DOMAIN (RESIDUES 350-370);
COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 SYNTHETIC: YES;
SOURCE 3 OTHER_DETAILS: THIS PEPTIDE WAS CHEMICALLY SYNTHESIZED. THE SEQUENCE
SOURCE 4 OF THIS PEPTIDE IS NATURALLY FOUND IN HEPATITIS C VIRUS.
KEYWDS TRANSMEMBRANE DOMAIN, ENVELOPE PROTEIN E1, HEPATITIS C VIRUS, VIRAL
KEYWDS 2 PROTEIN
EXPDTA SOLUTION NMR
AUTHOR A.OP DE BEECK,R.MONTSERRET,S.DUVET,L.COCQUEREL,R.CACAN,B.BARBEROT,
AUTHOR 2 M.LE MAIRE,F.PENIN,J.DUBUISSON
REVDAT 4 16-FEB-22 1EMZ 1 REMARK
REVDAT 3 24-FEB-09 1EMZ 1 VERSN
REVDAT 2 29-NOV-00 1EMZ 1 JRNL
REVDAT 1 05-APR-00 1EMZ 0
JRNL AUTH A.OP DE BEECK,R.MONTSERRET,S.DUVET,L.COCQUEREL,R.CACAN,
JRNL AUTH 2 B.BARBEROT,M.LE MAIRE,F.PENIN,J.DUBUISSON
JRNL TITL THE TRANSMEMBRANE DOMAINS OF HEPATITIS C VIRUS ENVELOPE
JRNL TITL 2 GLYCOPROTEINS E1 AND E2 PLAY A MAJOR ROLE IN
JRNL TITL 3 HETERODIMERIZATION.
JRNL REF J.BIOL.CHEM. V. 275 31428 2000
JRNL REFN ISSN 0021-9258
JRNL PMID 10807921
JRNL DOI 10.1074/JBC.M003003200
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : VNMR 6.1, X-PLOR 3.1
REMARK 3 AUTHORS : VARIAN INC. (VNMR), BRUNGER A.T. (X-PLOR)
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURE IS BASED ON 337 NOE
REMARK 3 DERIVED DISTANCE CONSTRAINTS
REMARK 4
REMARK 4 1EMZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-MAR-00.
REMARK 100 THE DEPOSITION ID IS D_1000010735.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 293
REMARK 210 PH : 5.7
REMARK 210 IONIC STRENGTH : NULL
REMARK 210 PRESSURE : AMBIENT
REMARK 210 SAMPLE CONTENTS : 4 MM E1(350-370), 50% H2O, 50%
REMARK 210 D2 TRIFLUOROETHANOL (V/V)
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : DQF-COSY; TOCSY; 2D NOESY
REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ
REMARK 210 SPECTROMETER MODEL : UNITYPLUS
REMARK 210 SPECTROMETER MANUFACTURER : VARIAN
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : X-PLOR 3.1
REMARK 210 METHOD USED : DISTANCE GEOMETRY, SIMULATED
REMARK 210 ANNEALING, MOLECULAR DYNAMIC,
REMARK 210 ENERGY MINIMIZATION
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 50
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 1
REMARK 210 CONFORMERS, SELECTION CRITERIA : BACK CALCULATED DATA AGREE WITH
REMARK 210 EXPERIMENTAL NOESY SPECTRUM,
REMARK 210 STRUCTURES WITH THE LEAST
REMARK 210 RESTRAINT VIOLATIONS,STRUCTURES
REMARK 210 WITH THE LOWEST ENERGY
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1
REMARK 210
REMARK 210 REMARK: SODIUM 2,2 DIMETHYL-2-SILAPENTANE-5-SULFONATE (DSS) IN THE
REMARK 210 INTERNAL NMR REFERENCE
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
DBREF 1EMZ A 1 21 UNP Q9Q3N3 Q9Q3N3_9HEPC 350 370
SEQRES 1 A 21 GLY ALA HIS TRP GLY VAL LEU ALA GLY ILE ALA TYR PHE
SEQRES 2 A 21 SER MET VAL GLY ASN TRP ALA LYS
HELIX 1 1 HIS A 3 LYS A 21 1 19
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
Complete list - 16 202 Bytes