Header list of 1e75.pdb file
Complete list - 9 20 Bytes
HEADER PEPTIDE TOXIN 24-AUG-00 1E75
TITLE NMR SOLUTION STRUCTURE OF ALPHA-CONOTOXIN IM1 POINT MUTATION VARIANT
TITLE 2 R7L
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: ALPHA-CONOTOXIN IM1(R7L);
COMPND 3 CHAIN: A;
COMPND 4 ENGINEERED: YES;
COMPND 5 MUTATION: YES
SOURCE MOL_ID: 1;
SOURCE 2 SYNTHETIC: YES;
SOURCE 3 ORGANISM_SCIENTIFIC: CONUS IMPERIALIS;
SOURCE 4 ORGANISM_TAXID: 35631;
SOURCE 5 OTHER_DETAILS: SYNTHESIZED USING STANDARD FMOC CHEMISTRY. IM1
SOURCE 6 SEQUENCE FOUND NATURALLY IN CONUS IMPERIALIS VENOM
KEYWDS PEPTIDE TOXIN, NEUROTOXIN, NEURONAL NICOTINIC ACETYLCHOLINE RECEPTOR
KEYWDS 2 ANTAGONIST, ALPHA-CONOTOXIN, NMR SOLUTION STRUCTURE
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR J.P.ROGERS,P.LUGINBUHL,K.PEMBERTON,P.HARTY,D.E.WEMMER,R.C.STEVENS
REVDAT 5 14-JUN-23 1E75 1 REMARK
REVDAT 4 15-JAN-20 1E75 1 LINK
REVDAT 3 14-JUN-17 1E75 1 REMARK
REVDAT 2 24-FEB-09 1E75 1 VERSN
REVDAT 1 27-DEC-00 1E75 0
JRNL AUTH J.P.ROGERS,P.LUGINBUHL,K.PEMBERTON,P.HARTY,D.E.WEMMER,
JRNL AUTH 2 R.C.STEVENS
JRNL TITL STRUCTURE-ACTIVITY RELATIONSHIPS IN A PEPTIDIC ALPHA7
JRNL TITL 2 NICOTINIC ACETYLCHOLINE RECEPTOR ANTAGONIST
JRNL REF J.MOL.BIOL. V. 304 911 2000
JRNL REFN ISSN 0022-2836
JRNL PMID 11124036
JRNL DOI 10.1006/JMBI.2000.4247
REMARK 1
REMARK 1 REFERENCE 1
REMARK 1 AUTH J.P.ROGERS,P.LUGINBUHL,G.S.SHEN,R.T.MCCABE,R.C.STEVENS,
REMARK 1 AUTH 2 D.E.WEMMER
REMARK 1 TITL NMR SOLUTION STRUCTURE OF ALPHA-CONOTOXIN IMI AND COMPARISON
REMARK 1 TITL 2 TO OTHER CONOTOXINS SPECIFIC FOR NEURONAL NICOTINIC
REMARK 1 TITL 3 ACETYLCHOLINE RECEPTORS
REMARK 1 REF BIOCHEMISTRY V. 38 3874 1999
REMARK 1 REFN ISSN 0006-2960
REMARK 1 PMID 10194298
REMARK 1 DOI 10.1021/BI9826254
REMARK 1 REFERENCE 2
REMARK 1 AUTH D.S.JOHNSON,J.MARTINEZ,A.B.ELGOYHEN,S.F.HEINEMANN,
REMARK 1 AUTH 2 J.M.MCINTOSH
REMARK 1 TITL ALPHA-CONOTOXIN IMI EXHIBITS SUBTYPE-SPECIFIC NICOTINIC
REMARK 1 TITL 2 ACETYLCHOLINE RECEPTOR BLOCKADE: PREFERENTIAL INHIBITION OF
REMARK 1 TITL 3 HOMOMERIC ALPHA7 AND ALPHA9 RECEPTORS
REMARK 1 REF MOL.PHARMACOL. V. 48 194 1995
REMARK 1 REFN ISSN 0026-895X
REMARK 1 PMID 7651351
REMARK 1 REFERENCE 3
REMARK 1 AUTH J.M.MCINTOSH,D.YOSHIKAMI,E.MAHE,D.B.NIELSEN,J.E.RIVIER,
REMARK 1 AUTH 2 W.R.GRAY,B.M.OLIVERA
REMARK 1 TITL A NICOTINIC ACETYLCHOLINE RECEPTOR LIGAND OF UNIQUE
REMARK 1 TITL 2 SPECIFICITY, ALPHA-CONOTOXIN IMI
REMARK 1 REF J.BIOL.CHEM. V. 269 16733 1994
REMARK 1 REFN ISSN 0021-9258
REMARK 1 PMID 8206995
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : OPAL
REMARK 3 AUTHORS : LUGINBUHL,GUNTERT,BILLETER,WUTHRICH
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: FOR THE PRESENT STRUCTURES THE NMR
REMARK 3 DISTANCE CONSTRAINTS WERE WEIGHTED SUCH THAT A VIOLATION OF AN
REMARK 3 UPPER DISTANCE LIMIT OF 0.1 ANGSTROM CORRESPONDS TO AN ENERGY OF
REMARK 3 KT/2. THE CONSTRAINTS ON DIHEDRAL ANGLES RESULTING FROM
REMARK 3 MEASUREMENTS OF VICINAL COUPLING CONSTANTS WERE WEIGHTED SUCH
REMARK 3 THAT A VIOLATION OF 2.5 DEGREES CORRESPONDS TO AN ENERGY OF KT/2.
REMARK 4
REMARK 4 1E75 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-AUG-00.
REMARK 100 THE DEPOSITION ID IS D_1290005314.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 298
REMARK 210 PH : 3.7
REMARK 210 IONIC STRENGTH : NULL
REMARK 210 PRESSURE : NULL
REMARK 210 SAMPLE CONTENTS : NULL
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : TOCSY; ROESY; DQF-COSY
REMARK 210 SPECTROMETER FIELD STRENGTH : 400 MHZ
REMARK 210 SPECTROMETER MODEL : DRX
REMARK 210 SPECTROMETER MANUFACTURER : BRUKER
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : DYANA, OPAL
REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS,
REMARK 210 RESTRAINED ENERGY MINIMISATION
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 40
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20
REMARK 210 CONFORMERS, SELECTION CRITERIA : LOWEST RESIDUAL TARGET FUNCTION
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 12
REMARK 210
REMARK 210 REMARK: DATA CONSIST OF 64 UPPER LIMITS ON DISTANCES OBTAINED FROM
REMARK 210 NOE MEASUREMENTS AND 30 ANGLE CONSTRAINTS OBTAINED FROM NOE
REMARK 210 MEASUREMENTS AND COUPLING CONSTANT MEASUREMENTS. THESE INPUT
REMARK 210 DATA ARE ALSO AVAILABLE FROM THE PROTEIN DATA BANK. THREE
REMARK 210 STEREOSPECIFIC RESONANCE ASSIGNMENTS HAVE BEEN MADE. TORSION
REMARK 210 ANGLE DYNAMICS CALCULATIONS WERE PERFORMED WITH THE PROGRAM
REMARK 210 DYANA (P. GUNTERT, C. MUMENTHALER, K. WUTHRICH, J. MOL. BIOL.
REMARK 210 (1997) VOL. 273, 283-298). FOR THE RESTRAINED ENERGY
REMARK 210 MINIMIZATION THE PROGRAM OPAL (P. LUGINBUHL, P. GUNTERT, M.
REMARK 210 BILLETER, K. WUTHRICH, J. BIOMOL. NMR (1996) VOL. 8, 136-146)
REMARK 210 WAS USED. DEPOSITED COORDINATES ARE THOSE OF CONFORMERS 1-20 IN
REMARK 210 THE PAPER CITED ON *JRNL* RECORDS ABOVE. NO VIOLATIONS OF
REMARK 210 DISTANCE CONSTRAINTS FROM NOES EXCEED 0.10 ANGSTROMS, AND NO
REMARK 210 VIOLATIONS OF ANGLE CONSTRAINTS EXCEED 2.0 DEGREES.
REMARK 210 REPRESENTATIVE CONFORMER HAS THE SMALLEST RMSD TO THE MEAN
REMARK 210 STRUCTURE UPON SUPERPOSITION OF THE BACKBONE ATOMS N, CA, AND C'
REMARK 210 OF RESIDUES 2-11.
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 1 CYS A 3 13.50 -66.40
REMARK 500 1 SER A 4 -69.95 -96.18
REMARK 500 1 ARG A 11 66.83 -163.71
REMARK 500 2 CYS A 2 -47.68 -145.70
REMARK 500 2 PRO A 6 3.63 -67.55
REMARK 500 3 TRP A 10 -13.16 -44.32
REMARK 500 3 ARG A 11 18.06 -163.44
REMARK 500 4 CYS A 8 -1.52 -147.79
REMARK 500 5 LEU A 7 -16.91 77.78
REMARK 500 5 ARG A 11 84.21 -164.07
REMARK 500 6 CYS A 8 20.88 -154.05
REMARK 500 6 ALA A 9 30.92 -73.72
REMARK 500 6 TRP A 10 3.41 -60.94
REMARK 500 6 ARG A 11 62.70 73.48
REMARK 500 7 CYS A 2 -52.47 -151.21
REMARK 500 7 CYS A 3 7.13 -66.61
REMARK 500 7 SER A 4 -119.79 -87.15
REMARK 500 7 ASP A 5 152.09 -48.06
REMARK 500 7 LEU A 7 -13.89 85.61
REMARK 500 8 CYS A 8 -30.02 -135.40
REMARK 500 8 TRP A 10 -9.31 -58.54
REMARK 500 8 ARG A 11 30.25 -163.33
REMARK 500 9 LEU A 7 -44.50 89.74
REMARK 500 10 LEU A 7 -2.17 96.00
REMARK 500 10 ARG A 11 32.01 -163.49
REMARK 500 11 LEU A 7 -9.18 75.33
REMARK 500 11 ARG A 11 50.34 -163.28
REMARK 500 12 LEU A 7 -14.93 72.53
REMARK 500 12 ARG A 11 34.20 -163.17
REMARK 500 13 SER A 4 -63.87 -96.43
REMARK 500 13 ARG A 11 52.70 -163.81
REMARK 500 14 LEU A 7 -40.28 96.96
REMARK 500 15 LEU A 7 -22.26 74.44
REMARK 500 16 CYS A 2 -35.45 -147.22
REMARK 500 16 SER A 4 -71.53 -74.16
REMARK 500 16 LEU A 7 -21.93 89.91
REMARK 500 17 LEU A 7 -16.23 93.51
REMARK 500 18 PRO A 6 33.48 -88.02
REMARK 500 18 LEU A 7 15.80 -143.60
REMARK 500 18 CYS A 8 -9.68 -155.81
REMARK 500 18 ARG A 11 35.34 -163.27
REMARK 500 19 LEU A 7 -16.45 80.60
REMARK 500 20 PRO A 6 31.59 -77.25
REMARK 500 20 LEU A 7 10.47 -143.19
REMARK 500 20 ARG A 11 69.88 -163.85
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS
REMARK 500
REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH
REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED
REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND
REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES.
REMARK 500 MODEL OMEGA
REMARK 500 GLY A 1 CYS A 2 16 147.38
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: PLANAR GROUPS
REMARK 500
REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL
REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE
REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN
REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS
REMARK 500 AN RMSD GREATER THAN THIS VALUE
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 M RES CSSEQI RMS TYPE
REMARK 500 8 ARG A 11 0.10 SIDE CHAIN
REMARK 500 11 ARG A 11 0.08 SIDE CHAIN
REMARK 500
REMARK 500 REMARK: NULL
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 1E74 RELATED DB: PDB
REMARK 900 NMR SOLUTION STRUCTURE OF ALPHA-CONOTOXIN IM1 POINT MUTATION
REMARK 900 VARIANT R11E (20 STRUCTURES)
REMARK 900 RELATED ID: 1E76 RELATED DB: PDB
REMARK 900 NMR SOLUTION STRUCTURE OF ALPHA-CONOTOXIN IM1 POINT MUTATION
REMARK 900 VARIANT D5N (20 STRUCTURES)
REMARK 900 RELATED ID: 1IM1 RELATED DB: PDB
REMARK 900 NMR SOLUTION STRUCTURE OF ALPHA-CONOTOXIN IM1, (20 STRUCTURES)
REMARK 900 RELATED ID: 1IMI RELATED DB: PDB
REMARK 900 SOLUTION STRUCTURE OF ALPHA-CONOTOXIN IM1
REMARK 900 RELATED ID: 1CNL RELATED DB: PDB
REMARK 900 ALPHA-CONOTOXIN IMI (10 STRUCTURES)
REMARK 900 RELATED ID: 4846 RELATED DB: BMRB
DBREF 1E75 A 1 12 UNP P50983 CXA1_CONIM 1 12
SEQADV 1E75 LEU A 7 UNP P50983 ARG 7 ENGINEERED MUTATION
SEQRES 1 A 13 GLY CYS CYS SER ASP PRO LEU CYS ALA TRP ARG CYS NH2
HET NH2 A 13 3
HETNAM NH2 AMINO GROUP
FORMUL 1 NH2 H2 N
HELIX 1 1 CYS A 8 CYS A 12 5 5
SSBOND 1 CYS A 2 CYS A 8 1555 1555 2.03
SSBOND 2 CYS A 3 CYS A 12 1555 1555 2.04
LINK C CYS A 12 N NH2 A 13 1555 1555 1.32
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - 9 20 Bytes