Header list of 1cx1.pdb file
Complete list - b 1 2 Bytes
HEADER HYDROLASE 27-AUG-99 1CX1
TITLE SECOND N-TERMINAL CELLULOSE-BINDING DOMAIN FROM CELLULOMONAS FIMI
TITLE 2 BETA-1,4-GLUCANASE C, NMR, 22 STRUCTURES
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: ENDOGLUCANASE C;
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: RESIDUES 176-328;
COMPND 5 EC: 3.2.1.4;
COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: CELLULOMONAS FIMI;
SOURCE 3 ORGANISM_TAXID: 1708;
SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562;
SOURCE 6 EXPRESSION_SYSTEM_VECTOR: PTUG
KEYWDS CELLULOSE-BINDING DOMAIN, CELLOOLIGOSACHARIDES, CELLULASE, PROTEIN-
KEYWDS 2 CARBOHYDRATE INTERACTION, HYDROLASE
EXPDTA SOLUTION NMR
NUMMDL 22
MDLTYP MINIMIZED AVERAGE
AUTHOR E.BRUN,P.E.JOHNSON,L.A.CREAGH,C.A.HAYNES,P.TOMME,P.WEBSTER,
AUTHOR 2 D.G.KILBURN,L.P.MCINTOSH
REVDAT 3 01-FEB-17 1CX1 1 AUTHOR VERSN
REVDAT 2 24-FEB-09 1CX1 1 VERSN
REVDAT 1 02-APR-00 1CX1 0
JRNL AUTH E.BRUN,P.E.JOHNSON,A.L.CREAGH,P.TOMME,P.WEBSTER,C.A.HAYNES,
JRNL AUTH 2 L.P.MCINTOSH
JRNL TITL STRUCTURE AND BINDING SPECIFICITY OF THE SECOND N-TERMINAL
JRNL TITL 2 CELLULOSE-BINDING DOMAIN FROM CELLULOMONAS FIMI
JRNL TITL 3 ENDOGLUCANASE C.
JRNL REF BIOCHEMISTRY V. 39 2445 2000
JRNL REFN ISSN 0006-2960
JRNL PMID 10704194
JRNL DOI 10.1021/BI992079U
REMARK 1
REMARK 1 REFERENCE 1
REMARK 1 AUTH E.BRUN,P.E.JOHNSON,L.MACKENZIE,S.G.WITHERS,L.P.MCINTOSH
REMARK 1 TITL THE CELLULOSE-BINDING DOMAINS FROM CELLULOMONAS FIMI BETA-1,
REMARK 1 TITL 2 4-GLUCANASE CENC BIND NITROXIDE SPIN-LABELED
REMARK 1 TITL 3 CELLOOLIGOSACCHARIDES IN MULTIPLE ORIENTATIONS
REMARK 1 REF J.MOL.BIOL. V. 287 609 1999
REMARK 1 REFN ISSN 0022-2836
REMARK 1 DOI 10.1006/JMBI.1999.2627
REMARK 1 REFERENCE 2
REMARK 1 AUTH P.E.JOHNSON,M.D.JOSHI,P.TOMME,D.G.KILBURN,L.P.MCINTOSH
REMARK 1 TITL STRUCTURE OF THE N-TERMINAL CELLULOSE-BINDING DOMAIN OF
REMARK 1 TITL 2 CELLULOMONAS FIMI CENC DETERMINED BY NUCELAR MAGNETIC
REMARK 1 TITL 3 RESONANCE SPECTROSCOPY
REMARK 1 REF BIOCHEMISTRY V. 35 14381 1997
REMARK 1 REFN ISSN 0006-2960
REMARK 1 DOI 10.1021/BI961612S
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : X-PLOR 3.8
REMARK 3 AUTHORS : BRUNGER, A. ET AL.
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: A TOTAL OF 1510 NOE DERIVED DISTANCE
REMARK 3 RESTRAINTS THAT COMPRISE 700 INTRARESIDUE, 332 SEQUENTIAL, 83
REMARK 3 SHORT RANGE (1<|I-J|<=4), 394 LONG RANGE (|I-J|>4) WERE
REMARK 3 INCLUDED.. 1 DISULPHIDE BOND DISTANCE RESTRAINT, 86 HYDROGEN BOND
REMARK 3 RESTRAINTS, 53 PHI ANGLE RESTRAINTS, 70 PSI ANGLE RESTRAINTS, AND
REMARK 3 48 CHI1 RESTRAINTS WERE ALSO INCLUDED.
REMARK 4
REMARK 4 1CX1 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-SEP-99.
REMARK 100 THE RCSB ID CODE IS RCSB009598.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 35
REMARK 210 PH : 6
REMARK 210 IONIC STRENGTH : 50MMNACL
REMARK 210 PRESSURE : 1ATM
REMARK 210 SAMPLE CONTENTS : 1.5 TO 2 MM CBDN2 U-15N, 13C; UP
REMARK 210 TO 22-FOLD MOLAR EXCESS OF
REMARK 210 CELLOPENTAOSE; IN 50 MM NACL, 50
REMARK 210 MM PHOSPHATE BUFFER K AT PH* 6.5,
REMARK 210 ; 1.5 TO 2 MM CBDN2 U-15N; UP TO
REMARK 210 22-FOLD MOLAR EXCESS OF
REMARK 210 CELLOPENTAOSE; IN 50 MM NACL, 50
REMARK 210 MM PHOSPHATE BUFFER K AT PH* 6.5,
REMARK 210 ; 1.5 TO 2 MM CBDN2 UNLABELED; UP
REMARK 210 TO 22-FOLD MOLAR EXCESS OF
REMARK 210 CELLOPENTAOSE; IN 50 MM NACL, 50
REMARK 210 MM PHOSPHATE BUFFER K AT PH* 6.5,
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N-
REMARK 210 SEPARATED_NOESY; 2D NOESY; 4D_
REMARK 210 13C/15N-SEPARATED_NOESY; HNHA
REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ
REMARK 210 SPECTROMETER MODEL : UNITY
REMARK 210 SPECTROMETER MANUFACTURER : VARIAN
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : VNMR 6.1A, FELIX 230, X-PLOR 3.8
REMARK 210 METHOD USED : ALL CALCULATIONS WERE PERFORMED
REMARK 210 USING X-PLOR V3.8 WITH SCRIPTS
REMARK 210 FROM THE X-PLOR 3.1 MANUAL A. A.
REMARK 210 BRUNGER (1992), NEW HAVEN: YALE
REMARK 210 UNIVERSITY PRESS ACCORDING TO THE
REMARK 210 METHOD DESCRIBED BY M. NILGES, G.
REMARK 210 M. CLORE & A. M. GRONENBORN
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 60
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 22
REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH ACCEPTABLE
REMARK 210 COVALENT GEOMETRY,STRUCTURES WITH
REMARK 210 THE LEAST RESTRAINT VIOLATIONS,
REMARK 210 STRUCTURES WITH THE LOWEST ENERGY
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 22
REMARK 210
REMARK 210 REMARK: CBDN2 WAS STUDIED IN THE PRESENCE OF SATURATING
REMARK 210 CONCENTRATIONS OF CELLOPENTAOSE. HOWEVER, DUE TO SPECTRAL
REMARK 210 OVERLAP, THE OLIGOSACCHARIDE WAS NOT INCLUDED IN THE STRUCTURE
REMARK 210 CALCULATIONS
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 HG1 THR A 149 H THR A 150 1.20
REMARK 500 HG1 THR A 27 H SER A 28 1.21
REMARK 500 OG1 THR A 27 H SER A 28 1.29
REMARK 500 O LYS A 135 H ALA A 138 1.30
REMARK 500 O PRO A 48 H ASP A 50 1.36
REMARK 500 O ALA A 90 H ARG A 92 1.37
REMARK 500 O THR A 103 H GLU A 105 1.40
REMARK 500 OG SER A 28 H ASP A 40 1.43
REMARK 500 HG1 THR A 71 O GLN A 145 1.52
REMARK 500 H SER A 23 O VAL A 54 1.53
REMARK 500 H MET A 37 O ILE A 143 1.59
REMARK 500 OG1 THR A 149 H THR A 150 1.60
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 1 SER A 2 -139.85 -72.63
REMARK 500 1 ASP A 4 115.64 -35.99
REMARK 500 1 SER A 5 101.42 59.09
REMARK 500 1 GLU A 6 168.11 -40.71
REMARK 500 1 VAL A 7 54.06 -106.87
REMARK 500 1 GLU A 8 119.37 -35.85
REMARK 500 1 PRO A 11 59.36 -67.33
REMARK 500 1 THR A 13 70.50 -170.37
REMARK 500 1 SER A 14 82.09 -161.33
REMARK 500 1 LEU A 24 123.06 -178.46
REMARK 500 1 THR A 27 -142.20 -109.90
REMARK 500 1 GLU A 29 101.75 -36.83
REMARK 500 1 PRO A 30 159.06 -48.16
REMARK 500 1 ALA A 33 -140.27 -56.26
REMARK 500 1 ASP A 34 -70.40 -35.65
REMARK 500 1 ASN A 47 96.34 -166.87
REMARK 500 1 TRP A 49 50.19 -62.95
REMARK 500 1 ASP A 50 -57.52 -133.16
REMARK 500 1 TYR A 55 148.91 -177.75
REMARK 500 1 VAL A 58 59.76 -163.21
REMARK 500 1 GLU A 62 117.40 -38.46
REMARK 500 1 PRO A 76 -141.72 -63.87
REMARK 500 1 MET A 78 163.50 166.25
REMARK 500 1 VAL A 80 -166.84 -128.50
REMARK 500 1 GLU A 86 -158.78 -90.07
REMARK 500 1 TYR A 91 -37.26 60.70
REMARK 500 1 PHE A 95 34.52 -90.97
REMARK 500 1 SER A 99 60.84 -112.33
REMARK 500 1 ALA A 107 -175.76 173.96
REMARK 500 1 ASP A 124 22.11 37.92
REMARK 500 1 ALA A 125 72.07 -151.77
REMARK 500 1 PRO A 126 -159.17 -74.22
REMARK 500 1 VAL A 129 112.98 -161.53
REMARK 500 1 LYS A 135 129.96 179.54
REMARK 500 1 ALA A 138 -145.86 -51.82
REMARK 500 1 TYR A 139 -112.11 171.89
REMARK 500 1 THR A 149 -157.92 -133.57
REMARK 500 1 THR A 150 -41.17 -139.64
REMARK 500 1 SER A 151 104.69 71.38
REMARK 500 2 SER A 2 -112.89 -91.72
REMARK 500 2 LEU A 3 -156.37 -168.10
REMARK 500 2 GLU A 6 94.91 35.89
REMARK 500 2 VAL A 7 162.77 -45.73
REMARK 500 2 PRO A 11 36.56 -53.02
REMARK 500 2 HIS A 12 138.99 -170.34
REMARK 500 2 THR A 13 70.30 -170.35
REMARK 500 2 SER A 14 77.10 -169.84
REMARK 500 2 TRP A 22 -167.62 -53.05
REMARK 500 2 THR A 27 -142.70 -109.90
REMARK 500 2 PRO A 30 154.76 -44.21
REMARK 500
REMARK 500 THIS ENTRY HAS 861 RAMACHANDRAN OUTLIERS.
REMARK 500
REMARK 500 REMARK: NULL
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 1ULO RELATED DB: PDB
REMARK 900 N-TERMINAL CELLULOSE-BINDING DOMAIN OF ENDOGLUCANASE C FROM
REMARK 900 CELLULOMONAS FIMI NMR, MINIMIZED AVERAGE STRUCTURE
REMARK 900 RELATED ID: 1ULP RELATED DB: PDB
REMARK 900 N-TERMINAL CELLULOSE-BINDING DOMAIN OF ENDOGLUCANASE C FROM
REMARK 900 CELLULOMONAS FIMI NMR ENSEMBLE 25 STRUCTURES
DBREF 1CX1 A 1 153 UNP P14090 GUNC_CELFI 176 328
SEQADV 1CX1 ALA A 1 UNP P14090 VAL 176 CLONING ARTIFACT
SEQADV 1CX1 SER A 2 UNP P14090 ALA 177 CLONING ARTIFACT
SEQRES 1 A 153 ALA SER LEU ASP SER GLU VAL GLU LEU LEU PRO HIS THR
SEQRES 2 A 153 SER PHE ALA GLU SER LEU GLY PRO TRP SER LEU TYR GLY
SEQRES 3 A 153 THR SER GLU PRO VAL PHE ALA ASP GLY ARG MET CYS VAL
SEQRES 4 A 153 ASP LEU PRO GLY GLY GLN GLY ASN PRO TRP ASP ALA GLY
SEQRES 5 A 153 LEU VAL TYR ASN GLY VAL PRO VAL GLY GLU GLY GLU SER
SEQRES 6 A 153 TYR VAL LEU SER PHE THR ALA SER ALA THR PRO ASP MET
SEQRES 7 A 153 PRO VAL ARG VAL LEU VAL GLY GLU GLY GLY GLY ALA TYR
SEQRES 8 A 153 ARG THR ALA PHE GLU GLN GLY SER ALA PRO LEU THR GLY
SEQRES 9 A 153 GLU PRO ALA THR ARG GLU TYR ALA PHE THR SER ASN LEU
SEQRES 10 A 153 THR PHE PRO PRO ASP GLY ASP ALA PRO GLY GLN VAL ALA
SEQRES 11 A 153 PHE HIS LEU GLY LYS ALA GLY ALA TYR GLU PHE CYS ILE
SEQRES 12 A 153 SER GLN VAL SER LEU THR THR SER ALA THR
SHEET 1 A 5 SER A 23 TYR A 25 0
SHEET 2 A 5 GLY A 52 TYR A 55 -1 N GLY A 52 O TYR A 25
SHEET 3 A 5 GLN A 128 HIS A 132 -1 O VAL A 129 N TYR A 55
SHEET 4 A 5 MET A 78 GLY A 85 -1 N ARG A 81 O HIS A 132
SHEET 5 A 5 GLN A 97 LEU A 102 -1 N GLN A 97 O VAL A 82
SHEET 1 B 5 VAL A 31 PHE A 32 0
SHEET 2 B 5 MET A 37 ASP A 40 -1 N CYS A 38 O VAL A 31
SHEET 3 B 5 GLU A 140 THR A 149 -1 N PHE A 141 O VAL A 39
SHEET 4 B 5 SER A 65 ALA A 74 -1 O VAL A 67 N THR A 149
SHEET 5 B 5 ALA A 107 THR A 114 -1 O ALA A 107 N ALA A 72
SSBOND 1 CYS A 38 CYS A 142 1555 1555 2.02
CISPEP 1 THR A 75 PRO A 76 1 -0.78
CISPEP 2 THR A 75 PRO A 76 2 -0.27
CISPEP 3 THR A 75 PRO A 76 3 -0.86
CISPEP 4 THR A 75 PRO A 76 4 -0.72
CISPEP 5 THR A 75 PRO A 76 5 -0.16
CISPEP 6 THR A 75 PRO A 76 6 -0.12
CISPEP 7 THR A 75 PRO A 76 7 -0.61
CISPEP 8 THR A 75 PRO A 76 8 0.07
CISPEP 9 THR A 75 PRO A 76 9 -0.04
CISPEP 10 THR A 75 PRO A 76 10 -0.60
CISPEP 11 THR A 75 PRO A 76 11 -0.41
CISPEP 12 THR A 75 PRO A 76 12 -0.23
CISPEP 13 THR A 75 PRO A 76 13 0.48
CISPEP 14 THR A 75 PRO A 76 14 -0.34
CISPEP 15 THR A 75 PRO A 76 15 -0.24
CISPEP 16 THR A 75 PRO A 76 16 -0.32
CISPEP 17 THR A 75 PRO A 76 17 -0.19
CISPEP 18 THR A 75 PRO A 76 18 -0.95
CISPEP 19 THR A 75 PRO A 76 19 -0.98
CISPEP 20 THR A 75 PRO A 76 20 -0.26
CISPEP 21 THR A 75 PRO A 76 21 0.04
CISPEP 22 THR A 75 PRO A 76 22 -0.26
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - b 1 2 Bytes