Header list of 1cix.pdb file
Complete list - b 16 2 Bytes
HEADER ANTIMICROBIAL PEPTIDE 06-APR-99 1CIX
TITLE THREE-DIMENSIONAL STRUCTURE OF ANTIMICROBIAL PEPTIDE TACHYSTATIN A
TITLE 2 ISOLATED FROM HORSESHOE CRAB
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: PROTEIN (TACHYSTATIN A);
COMPND 3 CHAIN: A
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: TACHYPLEUS TRIDENTATUS;
SOURCE 3 ORGANISM_TAXID: 6853;
SOURCE 4 OTHER_DETAILS: HEMOLYMPH OF HORSESHOE CRAB
KEYWDS ANTIMICROBIAL PEPTIDE, CHITIN-BINDING PEPTIDE
EXPDTA SOLUTION NMR
NUMMDL 24
AUTHOR N.FUJITANI,S.KAWABATA,T.OSAKI,Y.KUMAKI,M.DEMURA,K.NITTA,K.KAWANO
REVDAT 4 16-FEB-22 1CIX 1 REMARK
REVDAT 3 24-FEB-09 1CIX 1 VERSN
REVDAT 2 24-JUL-02 1CIX 1 JRNL
REVDAT 1 01-MAY-02 1CIX 0
JRNL AUTH N.FUJITANI,S.KAWABATA,T.OSAKI,Y.KUMAKI,M.DEMURA,K.NITTA,
JRNL AUTH 2 K.KAWANO
JRNL TITL STRUCTURE OF THE ANTIMICROBIAL PEPTIDE TACHYSTATIN A.
JRNL REF J.BIOL.CHEM. V. 277 23651 2002
JRNL REFN ISSN 0021-9258
JRNL PMID 11959852
JRNL DOI 10.1074/JBC.M111120200
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : X-PLOR3.1
REMARK 3 AUTHORS : BRUNGER
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 1CIX COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-APR-99.
REMARK 100 THE DEPOSITION ID IS D_1000000800.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 293
REMARK 210 PH : 3.5
REMARK 210 IONIC STRENGTH : NULL
REMARK 210 PRESSURE : 1 ATM
REMARK 210 SAMPLE CONTENTS : 90% H2O/10% D2O
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : DQF-COSY; TOCSY; NOESY
REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ
REMARK 210 SPECTROMETER MODEL : ALPHA 500
REMARK 210 SPECTROMETER MANUFACTURER : JEOL
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : X-PLOR3.1
REMARK 210 METHOD USED : DISTANCE GEOMETRY AND SIMMULATED
REMARK 210 ANNEALING
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 50
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 24
REMARK 210 CONFORMERS, SELECTION CRITERIA : LEAST RESTRAINT VIOLATION
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL
REMARK 210
REMARK 210 REMARK:
REMARK 210 THE STRUCTURE WAS DETERMINED USING TWO-DIMENSIONAL PROTON NMR
REMARK 210 SPECTRA, DQF-
REMARK 210 COSY, TOCSY AND NOESY.
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 1 GLN A 5 -168.31 -63.69
REMARK 500 1 PHE A 9 -166.88 -107.87
REMARK 500 1 SER A 15 90.37 -58.07
REMARK 500 1 CYS A 23 161.47 -47.58
REMARK 500 1 PHE A 33 167.69 168.61
REMARK 500 1 SER A 36 -167.38 -123.96
REMARK 500 1 THR A 37 25.65 -142.03
REMARK 500 1 ARG A 43 43.74 -86.03
REMARK 500 2 GLN A 5 -166.87 -61.78
REMARK 500 2 ARG A 14 -84.27 -90.47
REMARK 500 2 SER A 15 106.59 62.65
REMARK 500 2 LEU A 18 60.90 61.65
REMARK 500 2 PRO A 22 -167.48 -78.64
REMARK 500 2 PHE A 33 -55.81 172.06
REMARK 500 2 THR A 37 -41.20 -166.08
REMARK 500 2 ARG A 43 61.74 -100.11
REMARK 500 3 SER A 2 75.18 -152.20
REMARK 500 3 ARG A 3 71.34 -102.92
REMARK 500 3 SER A 15 58.79 -95.62
REMARK 500 3 TYR A 16 72.67 -102.38
REMARK 500 3 CYS A 24 161.38 -43.65
REMARK 500 3 PHE A 33 -54.35 165.00
REMARK 500 3 SER A 36 102.90 -48.00
REMARK 500 3 THR A 37 -52.27 -148.41
REMARK 500 3 GLN A 42 -162.01 -160.23
REMARK 500 3 ARG A 43 59.59 -102.11
REMARK 500 4 GLN A 5 -164.42 -61.39
REMARK 500 4 ARG A 14 58.31 -101.13
REMARK 500 4 PRO A 22 -161.51 -77.72
REMARK 500 4 CYS A 23 -168.23 -70.95
REMARK 500 4 ARG A 43 38.67 -88.22
REMARK 500 5 GLN A 5 -167.66 -66.38
REMARK 500 5 ARG A 25 151.29 -46.01
REMARK 500 5 TYR A 32 -72.65 -58.30
REMARK 500 5 PHE A 33 -54.81 168.74
REMARK 500 5 THR A 37 -81.48 -160.29
REMARK 500 5 ARG A 43 47.18 -103.87
REMARK 500 6 SER A 2 76.14 54.20
REMARK 500 6 GLN A 5 -169.25 -54.56
REMARK 500 6 PHE A 9 -164.19 -125.09
REMARK 500 6 CYS A 24 161.10 -49.21
REMARK 500 6 SER A 36 -162.29 -101.70
REMARK 500 6 THR A 37 -58.58 -135.68
REMARK 500 7 SER A 2 101.01 -167.63
REMARK 500 7 PHE A 9 -149.17 -120.59
REMARK 500 7 CYS A 24 -178.87 -59.18
REMARK 500 7 SER A 31 160.28 -44.04
REMARK 500 7 PHE A 33 -53.78 168.20
REMARK 500 7 ARG A 43 58.13 -90.85
REMARK 500 8 SER A 2 56.36 176.52
REMARK 500
REMARK 500 THIS ENTRY HAS 168 RAMACHANDRAN OUTLIERS.
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: PLANAR GROUPS
REMARK 500
REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL
REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE
REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN
REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS
REMARK 500 AN RMSD GREATER THAN THIS VALUE
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 M RES CSSEQI RMS TYPE
REMARK 500 1 ARG A 3 0.31 SIDE CHAIN
REMARK 500 1 ARG A 14 0.27 SIDE CHAIN
REMARK 500 1 ARG A 25 0.31 SIDE CHAIN
REMARK 500 1 ARG A 30 0.24 SIDE CHAIN
REMARK 500 1 ARG A 43 0.30 SIDE CHAIN
REMARK 500 2 ARG A 3 0.30 SIDE CHAIN
REMARK 500 2 ARG A 14 0.26 SIDE CHAIN
REMARK 500 2 ARG A 25 0.32 SIDE CHAIN
REMARK 500 2 ARG A 30 0.15 SIDE CHAIN
REMARK 500 2 ARG A 40 0.20 SIDE CHAIN
REMARK 500 2 ARG A 43 0.30 SIDE CHAIN
REMARK 500 3 ARG A 3 0.20 SIDE CHAIN
REMARK 500 3 ARG A 14 0.27 SIDE CHAIN
REMARK 500 3 ARG A 25 0.18 SIDE CHAIN
REMARK 500 3 ARG A 30 0.27 SIDE CHAIN
REMARK 500 3 ARG A 40 0.23 SIDE CHAIN
REMARK 500 3 ARG A 43 0.09 SIDE CHAIN
REMARK 500 4 ARG A 3 0.29 SIDE CHAIN
REMARK 500 4 ARG A 14 0.31 SIDE CHAIN
REMARK 500 4 ARG A 25 0.32 SIDE CHAIN
REMARK 500 4 ARG A 30 0.29 SIDE CHAIN
REMARK 500 4 ARG A 40 0.31 SIDE CHAIN
REMARK 500 4 ARG A 43 0.21 SIDE CHAIN
REMARK 500 5 ARG A 3 0.16 SIDE CHAIN
REMARK 500 5 ARG A 14 0.29 SIDE CHAIN
REMARK 500 5 ARG A 25 0.28 SIDE CHAIN
REMARK 500 5 ARG A 30 0.29 SIDE CHAIN
REMARK 500 5 ARG A 40 0.29 SIDE CHAIN
REMARK 500 5 ARG A 43 0.30 SIDE CHAIN
REMARK 500 6 ARG A 3 0.29 SIDE CHAIN
REMARK 500 6 ARG A 14 0.17 SIDE CHAIN
REMARK 500 6 ARG A 25 0.31 SIDE CHAIN
REMARK 500 6 ARG A 30 0.28 SIDE CHAIN
REMARK 500 6 ARG A 40 0.30 SIDE CHAIN
REMARK 500 6 ARG A 43 0.30 SIDE CHAIN
REMARK 500 7 ARG A 14 0.19 SIDE CHAIN
REMARK 500 7 ARG A 25 0.16 SIDE CHAIN
REMARK 500 7 ARG A 30 0.30 SIDE CHAIN
REMARK 500 7 ARG A 40 0.28 SIDE CHAIN
REMARK 500 7 ARG A 43 0.20 SIDE CHAIN
REMARK 500 8 ARG A 3 0.27 SIDE CHAIN
REMARK 500 8 ARG A 14 0.30 SIDE CHAIN
REMARK 500 8 ARG A 25 0.25 SIDE CHAIN
REMARK 500 8 ARG A 30 0.25 SIDE CHAIN
REMARK 500 8 ARG A 40 0.22 SIDE CHAIN
REMARK 500 8 ARG A 43 0.23 SIDE CHAIN
REMARK 500 9 ARG A 3 0.27 SIDE CHAIN
REMARK 500 9 ARG A 14 0.27 SIDE CHAIN
REMARK 500 9 ARG A 25 0.09 SIDE CHAIN
REMARK 500 9 ARG A 30 0.30 SIDE CHAIN
REMARK 500
REMARK 500 THIS ENTRY HAS 139 PLANE DEVIATIONS.
REMARK 500
REMARK 500 REMARK: NULL
DBREF 1CIX A 1 44 UNP Q9U8X3 Q9U8X3_TACTR 24 67
SEQRES 1 A 44 TYR SER ARG CYS GLN LEU GLN GLY PHE ASN CYS VAL VAL
SEQRES 2 A 44 ARG SER TYR GLY LEU PRO THR ILE PRO CYS CYS ARG GLY
SEQRES 3 A 44 LEU THR CYS ARG SER TYR PHE PRO GLY SER THR TYR GLY
SEQRES 4 A 44 ARG CYS GLN ARG TYR
SHEET 1 A 3 PHE A 9 CYS A 11 0
SHEET 2 A 3 GLY A 39 GLN A 42 -1 N CYS A 41 O PHE A 9
SHEET 3 A 3 THR A 28 SER A 31 -1 N ARG A 30 O ARG A 40
SSBOND 1 CYS A 4 CYS A 24 1555 1555 2.02
SSBOND 2 CYS A 11 CYS A 29 1555 1555 2.02
SSBOND 3 CYS A 23 CYS A 41 1555 1555 2.02
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - b 16 2 Bytes