Header list of 1bxd.pdb file
Complete list - b 16 2 Bytes
HEADER TRANSFERASE 02-OCT-98 1BXD
TITLE NMR STRUCTURE OF THE HISTIDINE KINASE DOMAIN OF THE E. COLI OSMOSENSOR
TITLE 2 ENVZ
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: PROTEIN (OSMOLARITY SENSOR PROTEIN (ENVZ));
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: RESIDUES 290-450;
COMPND 5 SYNONYM: ENVZ(290-450);
COMPND 6 EC: 2.7.3.-;
COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI BL21(DE3);
SOURCE 3 ORGANISM_TAXID: 469008;
SOURCE 4 STRAIN: BL21-DE3;
SOURCE 5 CELLULAR_LOCATION: CYTOPLASM;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3);
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008;
SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-DE3;
SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET11A
KEYWDS HISTIDINE KINASE, OSMOSENSOR, HIS-ASP PHOSPHORELAY SYSTEM, SIGNAL
KEYWDS 2 TRANSDUCTION, TRANSFERASE
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR T.TANAKA,S.K.SAHA,C.TOMOMORI,R.ISHIMA,D.LIU,K.I.TONG,H.PARK,R.DUTTA,
AUTHOR 2 L.QIN,M.B.SWINDELLS,T.YAMAZAKI,A.M.ONO,M.KAINOSHO,M.INOUYE,M.IKURA
REVDAT 3 16-FEB-22 1BXD 1 REMARK
REVDAT 2 24-FEB-09 1BXD 1 VERSN
REVDAT 1 02-OCT-99 1BXD 0
JRNL AUTH T.TANAKA,S.K.SAHA,C.TOMOMORI,R.ISHIMA,D.LIU,K.I.TONG,H.PARK,
JRNL AUTH 2 R.DUTTA,L.QIN,M.B.SWINDELLS,T.YAMAZAKI,A.M.ONO,M.KAINOSHO,
JRNL AUTH 3 M.INOUYE,M.IKURA
JRNL TITL NMR STRUCTURE OF THE HISTIDINE KINASE DOMAIN OF THE E. COLI
JRNL TITL 2 OSMOSENSOR ENVZ.
JRNL REF NATURE V. 396 88 1998
JRNL REFN ISSN 0028-0836
JRNL PMID 9817206
JRNL DOI 10.1038/23968
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : X-PLOR 3.8.5.1
REMARK 3 AUTHORS : BRUNGER
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 1BXD COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-JUL-99.
REMARK 100 THE DEPOSITION ID IS D_1000007021.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 298
REMARK 210 PH : 7.0
REMARK 210 IONIC STRENGTH : NULL
REMARK 210 PRESSURE : NULL
REMARK 210 SAMPLE CONTENTS : NULL
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : 15N-1H HSQC; 1H-13C CT-HSQC; 1H
REMARK 210 -15N HMQC-J; 1H NOESY; 1H TOCSY;
REMARK 210 (HB)CBCA(CO)NNH; HNCACB; (HB)
REMARK 210 CBCACO(CA)HA; HNCO; HCCH-TOCSY;
REMARK 210 15N-EDITED TOCSY-HMQC; 15N-
REMARK 210 EDITED NOESY-HSQC; 13C-EDITED
REMARK 210 NOESY-HMQC; SIMULTANEOUS 13C/
REMARK 210 15N-EDITED NOESY-HMQC; 13C-
REMARK 210 FILTERED TOCSY; [13C/ F1]-EDITED
REMARK 210 [13C/F2]-FILTERED NOESY
REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 600 MHZ; 750 MHZ
REMARK 210 SPECTROMETER MODEL : UNITY-PLUS 500; UNITY-600;
REMARK 210 DMX750
REMARK 210 SPECTROMETER MANUFACTURER : VARIAN; BRUKER
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : NULL
REMARK 210 METHOD USED : NULL
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20
REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL
REMARK 210
REMARK 210 REMARK: NULL
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 1 GLN A 292 166.63 54.86
REMARK 500 1 GLU A 293 40.88 -165.19
REMARK 500 1 MET A 296 89.39 23.68
REMARK 500 1 GLU A 297 -159.51 -144.42
REMARK 500 1 SER A 313 66.36 -115.67
REMARK 500 1 TYR A 315 74.43 -155.26
REMARK 500 1 GLU A 316 12.80 91.50
REMARK 500 1 GLU A 318 73.14 -65.74
REMARK 500 1 ALA A 322 77.73 -150.73
REMARK 500 1 SER A 327 107.97 171.35
REMARK 500 1 GLU A 329 103.95 -173.98
REMARK 500 1 LEU A 335 -73.92 -76.30
REMARK 500 1 ASN A 343 -19.28 -47.52
REMARK 500 1 ARG A 350 -72.56 -63.95
REMARK 500 1 ASN A 353 29.81 -171.68
REMARK 500 1 TRP A 355 129.39 178.46
REMARK 500 1 ASN A 365 34.02 80.49
REMARK 500 1 ARG A 366 105.50 172.50
REMARK 500 1 HIS A 385 68.95 -117.47
REMARK 500 1 LEU A 386 71.74 -109.50
REMARK 500 1 PHE A 390 128.95 61.04
REMARK 500 1 SER A 400 -175.76 -171.23
REMARK 500 1 ALA A 407 44.29 -90.73
REMARK 500 1 ILE A 408 164.40 -43.50
REMARK 500 1 VAL A 409 -59.30 80.52
REMARK 500 1 ILE A 412 -70.73 -67.29
REMARK 500 1 ASN A 417 42.91 81.43
REMARK 500 1 VAL A 440 143.30 -39.26
REMARK 500 2 GLN A 292 105.97 -161.91
REMARK 500 2 GLU A 293 38.72 -174.25
REMARK 500 2 GLU A 297 -156.33 -134.53
REMARK 500 2 ARG A 317 -82.79 -71.66
REMARK 500 2 GLU A 318 55.90 -147.14
REMARK 500 2 SER A 327 100.12 55.29
REMARK 500 2 GLU A 329 110.96 -171.45
REMARK 500 2 LYS A 331 98.25 -68.69
REMARK 500 2 ALA A 349 -81.68 -56.65
REMARK 500 2 ASN A 353 28.64 -159.21
REMARK 500 2 TRP A 355 132.12 -176.15
REMARK 500 2 ARG A 366 116.73 171.64
REMARK 500 2 TRP A 368 143.93 -170.55
REMARK 500 2 LYS A 384 -18.57 -44.03
REMARK 500 2 LEU A 386 104.08 -169.08
REMARK 500 2 PHE A 387 78.30 62.61
REMARK 500 2 GLN A 388 69.46 -172.80
REMARK 500 2 PHE A 390 62.65 -178.66
REMARK 500 2 VAL A 391 64.29 -151.37
REMARK 500 2 ALA A 396 112.93 60.57
REMARK 500 2 THR A 398 -170.09 43.93
REMARK 500 2 THR A 402 -51.90 -133.33
REMARK 500
REMARK 500 THIS ENTRY HAS 556 RAMACHANDRAN OUTLIERS.
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: PLANAR GROUPS
REMARK 500
REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL
REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE
REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN
REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS
REMARK 500 AN RMSD GREATER THAN THIS VALUE
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 M RES CSSEQI RMS TYPE
REMARK 500 1 ARG A 317 0.17 SIDE CHAIN
REMARK 500 1 ARG A 339 0.25 SIDE CHAIN
REMARK 500 1 ARG A 350 0.29 SIDE CHAIN
REMARK 500 1 ARG A 366 0.32 SIDE CHAIN
REMARK 500 1 ARG A 383 0.25 SIDE CHAIN
REMARK 500 1 ARG A 392 0.21 SIDE CHAIN
REMARK 500 1 ARG A 397 0.25 SIDE CHAIN
REMARK 500 1 ARG A 411 0.32 SIDE CHAIN
REMARK 500 1 ARG A 427 0.31 SIDE CHAIN
REMARK 500 1 ARG A 433 0.29 SIDE CHAIN
REMARK 500 1 ARG A 442 0.31 SIDE CHAIN
REMARK 500 2 ARG A 317 0.32 SIDE CHAIN
REMARK 500 2 ARG A 339 0.29 SIDE CHAIN
REMARK 500 2 ARG A 350 0.13 SIDE CHAIN
REMARK 500 2 ARG A 366 0.09 SIDE CHAIN
REMARK 500 2 ARG A 383 0.27 SIDE CHAIN
REMARK 500 2 ARG A 392 0.31 SIDE CHAIN
REMARK 500 2 ARG A 397 0.12 SIDE CHAIN
REMARK 500 2 ARG A 411 0.18 SIDE CHAIN
REMARK 500 2 ARG A 427 0.20 SIDE CHAIN
REMARK 500 2 ARG A 433 0.16 SIDE CHAIN
REMARK 500 2 ARG A 442 0.27 SIDE CHAIN
REMARK 500 3 ARG A 317 0.20 SIDE CHAIN
REMARK 500 3 ARG A 339 0.30 SIDE CHAIN
REMARK 500 3 ARG A 350 0.32 SIDE CHAIN
REMARK 500 3 ARG A 366 0.26 SIDE CHAIN
REMARK 500 3 ARG A 383 0.25 SIDE CHAIN
REMARK 500 3 ARG A 392 0.30 SIDE CHAIN
REMARK 500 3 ARG A 397 0.21 SIDE CHAIN
REMARK 500 3 ARG A 411 0.14 SIDE CHAIN
REMARK 500 3 ARG A 427 0.31 SIDE CHAIN
REMARK 500 3 ARG A 433 0.25 SIDE CHAIN
REMARK 500 3 ARG A 442 0.30 SIDE CHAIN
REMARK 500 4 ARG A 317 0.31 SIDE CHAIN
REMARK 500 4 ARG A 339 0.29 SIDE CHAIN
REMARK 500 4 ARG A 350 0.25 SIDE CHAIN
REMARK 500 4 ARG A 366 0.29 SIDE CHAIN
REMARK 500 4 ARG A 383 0.29 SIDE CHAIN
REMARK 500 4 ARG A 392 0.32 SIDE CHAIN
REMARK 500 4 ARG A 397 0.31 SIDE CHAIN
REMARK 500 4 ARG A 411 0.28 SIDE CHAIN
REMARK 500 4 ARG A 427 0.23 SIDE CHAIN
REMARK 500 4 ARG A 433 0.31 SIDE CHAIN
REMARK 500 4 ARG A 442 0.16 SIDE CHAIN
REMARK 500 5 ARG A 317 0.29 SIDE CHAIN
REMARK 500 5 ARG A 339 0.22 SIDE CHAIN
REMARK 500 5 ARG A 350 0.24 SIDE CHAIN
REMARK 500 5 ARG A 366 0.26 SIDE CHAIN
REMARK 500 5 ARG A 383 0.31 SIDE CHAIN
REMARK 500 5 ARG A 392 0.32 SIDE CHAIN
REMARK 500
REMARK 500 THIS ENTRY HAS 211 PLANE DEVIATIONS.
REMARK 500
REMARK 500 REMARK: NULL
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ANP A 451
DBREF 1BXD A 290 450 UNP P02933 ENVZ_ECOLI 290 450
SEQRES 1 A 161 THR GLY GLN GLU MET PRO MET GLU MET ALA ASP LEU ASN
SEQRES 2 A 161 ALA VAL LEU GLY GLU VAL ILE ALA ALA GLU SER GLY TYR
SEQRES 3 A 161 GLU ARG GLU ILE GLU THR ALA LEU TYR PRO GLY SER ILE
SEQRES 4 A 161 GLU VAL LYS MET HIS PRO LEU SER ILE LYS ARG ALA VAL
SEQRES 5 A 161 ALA ASN MET VAL VAL ASN ALA ALA ARG TYR GLY ASN GLY
SEQRES 6 A 161 TRP ILE LYS VAL SER SER GLY THR GLU PRO ASN ARG ALA
SEQRES 7 A 161 TRP PHE GLN VAL GLU ASP ASP GLY PRO GLY ILE ALA PRO
SEQRES 8 A 161 GLU GLN ARG LYS HIS LEU PHE GLN PRO PHE VAL ARG GLY
SEQRES 9 A 161 ASP SER ALA ARG THR ILE SER GLY THR GLY LEU GLY LEU
SEQRES 10 A 161 ALA ILE VAL GLN ARG ILE VAL ASP ASN HIS ASN GLY MET
SEQRES 11 A 161 LEU GLU LEU GLY THR SER GLU ARG GLY GLY LEU SER ILE
SEQRES 12 A 161 ARG ALA TRP LEU PRO VAL PRO VAL THR ARG ALA GLN GLY
SEQRES 13 A 161 THR THR LYS GLU GLY
HET ANP A 451 45
HETNAM ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
FORMUL 2 ANP C10 H17 N6 O12 P3
HELIX 1 1 LEU A 301 ALA A 311 1 11
HELIX 2 2 PRO A 334 ASN A 343 1 10
HELIX 3 3 PRO A 380 LYS A 384 1 5
HELIX 4 4 GLN A 410 ASP A 414 1 5
SHEET 1 1 1 GLU A 297 ALA A 299 0
SHEET 1 2 1 VAL A 330 MET A 332 0
SHEET 1 3 1 ILE A 319 LEU A 323 0
SHEET 1 4 1 ILE A 356 THR A 362 0
SHEET 1 5 1 ALA A 367 ASP A 373 0
SHEET 1 6 1 SER A 431 LEU A 436 0
SHEET 1 7 1 LEU A 420 GLY A 423 0
SITE 1 AC1 8 ASP A 373 ILE A 378 GLN A 382 LEU A 386
SITE 2 AC1 8 PHE A 387 LEU A 422 LEU A 430 ILE A 432
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - b 16 2 Bytes