Header list of 1b75.pdb file
Complete list - r 23 2 Bytes
HEADER RNA BINDING PROTEIN 27-JAN-99 1B75
TITLE SOLUTION STRUCTURE OF RIBOSOMAL PROTEIN L25 FROM ESCHERICHIA COLI
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: PROTEIN (50S RIBOSOMAL PROTEIN L25);
COMPND 3 CHAIN: A
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI;
SOURCE 3 ORGANISM_TAXID: 562;
SOURCE 4 STRAIN: MRE 600
KEYWDS RIBOSOMAL PROTEIN, RNA-BINDING PROTEIN, RNA BINDING PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 10
AUTHOR M.STOLDT,J.WOEHNERT,M.GOERLACH,L.R.BROWN
REVDAT 5 23-MAR-22 1B75 1 REMARK
REVDAT 4 24-FEB-09 1B75 1 VERSN
REVDAT 3 01-APR-03 1B75 1 JRNL
REVDAT 2 26-SEP-01 1B75 3 ATOM
REVDAT 1 26-JAN-00 1B75 0
JRNL AUTH M.STOLDT,J.WOHNERT,M.GORLACH,L.R.BROWN
JRNL TITL THE NMR STRUCTURE OF ESCHERICHIA COLI RIBOSOMAL PROTEIN L25
JRNL TITL 2 SHOWS HOMOLOGY TO GENERAL STRESS PROTEINS AND
JRNL TITL 3 GLUTAMINYL-TRNA SYNTHETASES.
JRNL REF EMBO J. V. 17 6377 1998
JRNL REFN ISSN 0261-4189
JRNL PMID 9799245
JRNL DOI 10.1093/EMBOJ/17.21.6377
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : DYANA
REMARK 3 AUTHORS : GUNTERT,WUTHRICH
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: REFINEMENT DETAILS CAN BE FOUND IN THE
REMARK 3 JRNL CITATION ABOVE.
REMARK 4
REMARK 4 1B75 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-JAN-99.
REMARK 100 THE DEPOSITION ID IS D_1000000392.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 298
REMARK 210 PH : 7.0
REMARK 210 IONIC STRENGTH : 100 MM KCL
REMARK 210 PRESSURE : 1 ATM
REMARK 210 SAMPLE CONTENTS : NULL
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D/4D HETERONUCLEAR EXPERIMENTS
REMARK 210 SPECTROMETER FIELD STRENGTH : 750 MHZ
REMARK 210 SPECTROMETER MODEL : UNITY INOVA
REMARK 210 SPECTROMETER MANUFACTURER : VARIAN
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : DYANA
REMARK 210 METHOD USED : DISTANCE GEOMETRY/SIMULAT
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 100
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10
REMARK 210 CONFORMERS, SELECTION CRITERIA : LOWEST TARGET FUNCTION
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL
REMARK 210
REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR
REMARK 210 SPECTROSCOPY ON 13C, 15N LABELED L25.
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 1 GLN A 12 96.20 -67.12
REMARK 500 1 ARG A 19 -46.01 -163.86
REMARK 500 1 ARG A 21 45.86 -85.79
REMARK 500 1 ALA A 22 -48.25 -173.46
REMARK 500 1 ALA A 23 -118.58 -78.71
REMARK 500 1 ASN A 24 67.54 -158.12
REMARK 500 1 LYS A 34 -68.50 -167.89
REMARK 500 1 HIS A 44 -62.20 -102.17
REMARK 500 1 ALA A 52 -74.49 61.61
REMARK 500 1 LYS A 53 -112.32 -152.34
REMARK 500 1 VAL A 60 155.42 71.06
REMARK 500 1 ALA A 74 155.62 79.22
REMARK 500 1 GLN A 75 -79.36 -127.55
REMARK 500 1 TYR A 82 -67.92 73.98
REMARK 500 1 LYS A 85 -61.03 -140.36
REMARK 500 2 GLU A 11 -69.91 69.37
REMARK 500 2 GLN A 12 68.19 -150.23
REMARK 500 2 ARG A 19 -50.79 -164.35
REMARK 500 2 ALA A 22 -62.44 -166.44
REMARK 500 2 ALA A 23 -44.47 -169.12
REMARK 500 2 ASN A 24 90.71 -67.65
REMARK 500 2 LYS A 25 163.36 69.79
REMARK 500 2 LYS A 34 -50.36 -160.25
REMARK 500 2 ASP A 45 -71.40 -162.48
REMARK 500 2 ALA A 52 -74.84 62.75
REMARK 500 2 LYS A 53 -102.64 -144.40
REMARK 500 2 VAL A 60 151.27 75.54
REMARK 500 2 ASP A 66 83.69 58.06
REMARK 500 2 ALA A 74 140.84 73.13
REMARK 500 2 GLN A 75 -76.79 -136.88
REMARK 500 2 TYR A 82 -68.86 73.42
REMARK 500 2 LYS A 85 71.78 -155.32
REMARK 500 3 PHE A 2 168.20 63.20
REMARK 500 3 THR A 3 88.94 -153.86
REMARK 500 3 ARG A 9 96.02 -68.73
REMARK 500 3 LYS A 10 83.99 -158.33
REMARK 500 3 ARG A 18 -126.19 51.69
REMARK 500 3 LEU A 20 -67.13 -153.38
REMARK 500 3 ARG A 21 -72.07 -5.49
REMARK 500 3 ALA A 22 54.20 -147.34
REMARK 500 3 ALA A 23 -106.76 -151.29
REMARK 500 3 LYS A 25 76.44 70.59
REMARK 500 3 LYS A 34 144.85 178.08
REMARK 500 3 GLU A 35 156.51 74.09
REMARK 500 3 ASP A 45 -64.43 -161.57
REMARK 500 3 GLN A 51 -80.60 -59.47
REMARK 500 3 ALA A 52 -28.09 67.97
REMARK 500 3 LYS A 53 152.09 75.71
REMARK 500 3 ALA A 54 -70.48 68.24
REMARK 500 3 SER A 58 -63.87 -140.91
REMARK 500
REMARK 500 THIS ENTRY HAS 163 RAMACHANDRAN OUTLIERS.
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: PLANAR GROUPS
REMARK 500
REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL
REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE
REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN
REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS
REMARK 500 AN RMSD GREATER THAN THIS VALUE
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 M RES CSSEQI RMS TYPE
REMARK 500 2 PHE A 56 0.10 SIDE CHAIN
REMARK 500 4 TYR A 57 0.07 SIDE CHAIN
REMARK 500 6 PHE A 56 0.10 SIDE CHAIN
REMARK 500 7 PHE A 56 0.09 SIDE CHAIN
REMARK 500 7 TYR A 57 0.07 SIDE CHAIN
REMARK 500 8 PHE A 56 0.08 SIDE CHAIN
REMARK 500 10 PHE A 26 0.08 SIDE CHAIN
REMARK 500
REMARK 500 REMARK: NULL
DBREF 1B75 A 1 94 UNP P68919 RL25_ECOLI 1 94
SEQRES 1 A 94 MET PHE THR ILE ASN ALA GLU VAL ARG LYS GLU GLN GLY
SEQRES 2 A 94 LYS GLY ALA SER ARG ARG LEU ARG ALA ALA ASN LYS PHE
SEQRES 3 A 94 PRO ALA ILE ILE TYR GLY GLY LYS GLU ALA PRO LEU ALA
SEQRES 4 A 94 ILE GLU LEU ASP HIS ASP LYS VAL MET ASN MET GLN ALA
SEQRES 5 A 94 LYS ALA GLU PHE TYR SER GLU VAL LEU THR ILE VAL VAL
SEQRES 6 A 94 ASP GLY LYS GLU ILE LYS VAL LYS ALA GLN ASP VAL GLN
SEQRES 7 A 94 ARG HIS PRO TYR LYS PRO LYS LEU GLN HIS ILE ASP PHE
SEQRES 8 A 94 VAL ARG ALA
HELIX 1 A ASP A 45 GLN A 51 1 7
HELIX 2 B GLU A 55 SER A 58 1 4
SHEET 1 I 6 THR A 3 VAL A 8 0
SHEET 2 I 6 LEU A 61 VAL A 65 1 N ILE A 4 O THR A 62
SHEET 3 I 6 GLU A 69 GLN A 78 -1 N VAL A 72 O LEU A 61
SHEET 4 I 6 HIS A 88 VAL A 92 -1 N VAL A 92 O LYS A 73
SHEET 5 I 6 PHE A 26 GLY A 32 1 N ILE A 29 O ILE A 89
SHEET 6 I 6 PRO A 37 ASP A 43 -1 N ILE A 40 O ALA A 28
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - r 23 2 Bytes