Header list of 1b2t.pdb file
Complete list - b 16 2 Bytes
HEADER CHEMOKINE 01-DEC-98 1B2T
TITLE SOLUTION STRUCTURE OF THE CX3C CHEMOKINE DOMAIN OF FRACTALKINE
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: PROTEIN (FRACTALKINE);
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: CHEMOKINE DOMAIN;
COMPND 5 ENGINEERED: YES;
COMPND 6 OTHER_DETAILS: DISULFIDE BETWEEN 8 AND 34 AND 12 AND 50
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562;
SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21;
SOURCE 8 EXPRESSION_SYSTEM_VARIANT: PLYSS;
SOURCE 9 EXPRESSION_SYSTEM_CELLULAR_LOCATION: CYTOPLASM
KEYWDS CHEMOKINE
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR T.M.HANDEL,L.S.MIZOUE,J.F.BAZAN,E.C.JOHNSON
REVDAT 5 16-FEB-22 1B2T 1 REMARK SEQADV
REVDAT 4 24-FEB-09 1B2T 1 VERSN
REVDAT 3 18-APR-01 1B2T 1 REVDAT SOURCE REMARK
REVDAT 2 08-APR-99 1B2T 3 ATOM
REVDAT 1 08-APR-99 1B2T 0
JRNL AUTH L.S.MIZOUE,J.F.BAZAN,E.C.JOHNSON,T.M.HANDEL
JRNL TITL SOLUTION STRUCTURE AND DYNAMICS OF THE CX3C CHEMOKINE DOMAIN
JRNL TITL 2 OF FRACTALKINE AND ITS INTERACTION WITH AN N-TERMINAL
JRNL TITL 3 FRAGMENT OF CX3CR1.
JRNL REF BIOCHEMISTRY V. 38 1402 1999
JRNL REFN ISSN 0006-2960
JRNL PMID 9931005
JRNL DOI 10.1021/BI9820614
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : X-PLOR
REMARK 3 AUTHORS : BRUNGER
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: REFINEMENT DETAILS CAN BE FOUND IN THE
REMARK 3 JOURNAL CITATION ABOVE
REMARK 4
REMARK 4 1B2T COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-DEC-98.
REMARK 100 THE DEPOSITION ID IS D_1000000185.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 295.5
REMARK 210 PH : 5.0
REMARK 210 IONIC STRENGTH : NULL
REMARK 210 PRESSURE : 1 ATM
REMARK 210 SAMPLE CONTENTS : NULL
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D 15N-EDITED; 3D 13C-EDITED; 4D
REMARK 210 13C/13C-EDITED NOESY
REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ
REMARK 210 SPECTROMETER MODEL : DMX600
REMARK 210 SPECTROMETER MANUFACTURER : BRUKER
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : X-PLOR
REMARK 210 METHOD USED : RESTRAINED MOLECULAR DYNAMICS
REMARK 210 -SIMULATED ANNEALING COUPLED
REMARK 210 WITH THE AMBIGUOUS RESTRAINTS
REMARK 210 FOR ITERATIVE ASSIGNMENT (ARIA)
REMARK 210 EXTENSION OF NILGES (M.NILGES,
REMARK 210 J. MOL. BIOL. 245, 645-660, 1995)
REMARK 210 .
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : 70
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20
REMARK 210 CONFORMERS, SELECTION CRITERIA : LOWEST ENERGY
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 20
REMARK 210
REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR
REMARK 210 SPECTROSCOPY ON 13C, 15N-LABELED PROTEIN.
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 1 HIS A 2 -53.63 -157.83
REMARK 500 1 VAL A 5 52.50 -117.62
REMARK 500 1 THR A 6 -163.59 -121.65
REMARK 500 1 LYS A 7 101.90 170.90
REMARK 500 1 CYS A 8 131.82 63.81
REMARK 500 1 GLN A 28 -169.12 -101.10
REMARK 500 1 CYS A 34 -79.85 -109.58
REMARK 500 1 ARG A 37 88.91 -64.18
REMARK 500 1 ALA A 38 -152.61 -126.94
REMARK 500 1 ALA A 71 169.57 -48.43
REMARK 500 1 LEU A 72 -77.33 58.49
REMARK 500 1 ARG A 74 47.69 -86.93
REMARK 500 2 GLN A 1 40.90 36.22
REMARK 500 2 HIS A 2 -63.39 -145.42
REMARK 500 2 HIS A 3 56.16 179.73
REMARK 500 2 VAL A 5 53.09 -113.53
REMARK 500 2 THR A 6 -162.40 -124.06
REMARK 500 2 LYS A 7 45.34 176.96
REMARK 500 2 THR A 16 -168.75 -110.95
REMARK 500 2 ALA A 32 81.67 -55.58
REMARK 500 2 SER A 33 -41.11 176.30
REMARK 500 2 ARG A 37 85.71 -66.23
REMARK 500 2 ALA A 38 -157.19 -124.23
REMARK 500 2 HIS A 46 35.96 86.21
REMARK 500 2 GLN A 68 -80.28 -162.52
REMARK 500 2 LEU A 72 -78.06 -113.49
REMARK 500 3 GLN A 1 -157.08 57.87
REMARK 500 3 HIS A 2 95.55 -43.68
REMARK 500 3 HIS A 3 -46.89 173.34
REMARK 500 3 ASN A 9 -34.26 -34.38
REMARK 500 3 GLN A 28 -166.61 -120.62
REMARK 500 3 ALA A 32 84.91 -67.15
REMARK 500 3 SER A 33 -35.08 -173.51
REMARK 500 3 ARG A 37 85.38 -69.83
REMARK 500 3 ALA A 38 -166.06 -114.20
REMARK 500 3 GLN A 68 -69.91 -127.13
REMARK 500 3 ALA A 71 -176.64 -48.48
REMARK 500 3 LEU A 72 -83.60 54.00
REMARK 500 3 ARG A 74 -90.26 -36.36
REMARK 500 4 VAL A 5 78.27 -109.87
REMARK 500 4 LYS A 7 91.69 67.60
REMARK 500 4 CYS A 8 110.96 72.24
REMARK 500 4 ASN A 9 -34.96 -34.24
REMARK 500 4 SER A 13 88.44 -59.22
REMARK 500 4 LYS A 14 150.35 85.70
REMARK 500 4 THR A 16 -168.06 -75.78
REMARK 500 4 ALA A 32 82.99 -65.45
REMARK 500 4 SER A 33 -24.77 163.64
REMARK 500 4 ALA A 38 -167.17 -113.24
REMARK 500 4 ARG A 67 46.15 -87.67
REMARK 500
REMARK 500 THIS ENTRY HAS 202 RAMACHANDRAN OUTLIERS.
REMARK 500
REMARK 500 REMARK: NULL
DBREF 1B2T A 1 76 UNP P78423 X3CL1_HUMAN 25 100
SEQADV 1B2T MET A 0 UNP P78423 CLONING ARTIFACT
SEQRES 1 A 77 MET GLN HIS HIS GLY VAL THR LYS CYS ASN ILE THR CYS
SEQRES 2 A 77 SER LYS MET THR SER LYS ILE PRO VAL ALA LEU LEU ILE
SEQRES 3 A 77 HIS TYR GLN GLN ASN GLN ALA SER CYS GLY LYS ARG ALA
SEQRES 4 A 77 ILE ILE LEU GLU THR ARG GLN HIS ARG LEU PHE CYS ALA
SEQRES 5 A 77 ASP PRO LYS GLU GLN TRP VAL LYS ASP ALA MET GLN HIS
SEQRES 6 A 77 LEU ASP ARG GLN ALA ALA ALA LEU THR ARG ASN GLY
HELIX 1 H1 PRO A 20 LEU A 23 51 TURN OF 3/10 4
HELIX 2 H2 GLN A 56 ARG A 67 1 12
SHEET 1 S1 1 LEU A 24 GLN A 29 0
SHEET 1 S2 1 ILE A 39 THR A 43 0
SHEET 1 S3 1 LEU A 48 ALA A 51 0
SSBOND 1 CYS A 8 CYS A 34 1555 1555 2.03
SSBOND 2 CYS A 12 CYS A 50 1555 1555 2.03
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000
MODEL 1
Complete list - b 16 2 Bytes