Complet list of 2hg7 hssp file
Complete list of 2hg7.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 2HG7
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-19
HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 26-JUN-06 2HG7
COMPND MOL_ID: 1; MOLECULE: PHAGE-LIKE ELEMENT PBSX PROTEIN XKDW; CHAIN: A; E
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; ORGANISM_TAXID: 142
AUTHOR G.LIU,D.PARISH,D.XU,H.ATREYA,D.SUKUMARAN,C.K.HO,M.JIANG, K.CUNNINGHAM,
DBREF 2HG7 A 1 102 UNP P54342 XKDW_BACSU 1 103
SEQLENGTH 60
NCHAIN 1 chain(s) in 2HG7 data set
NALIGN 42
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : E8VIP1_BACST 1.00 1.00 1 60 1 60 60 0 0 109 E8VIP1 Uncharacterized protein OS=Bacillus subtilis (strain BSn5) GN=BSn5_18395 PE=4 SV=1
2 : G4EXE5_BACIU 1.00 1.00 1 60 1 60 60 0 0 109 G4EXE5 Uncharacterized protein OS=Bacillus subtilis subsp. subtilis str. SC-8 GN=BSSC8_30250 PE=4 SV=1
3 : J7JR23_BACIU 1.00 1.00 1 60 1 60 60 0 0 109 J7JR23 XkdW OS=Bacillus subtilis QB928 GN=B657_12760 PE=4 SV=1
4 : L8AF39_BACIU 1.00 1.00 1 60 1 60 60 0 0 109 L8AF39 Uncharacterized protein OS=Bacillus subtilis BEST7613 GN=xkdW PE=4 SV=1
5 : M1U7B3_BACIU 1.00 1.00 1 60 1 60 60 0 0 109 M1U7B3 PBSX prophage protein XkdW OS=Bacillus subtilis subsp. subtilis 6051-HGW GN=xkdW PE=4 SV=1
6 : M2UBD9_BACIU 1.00 1.00 1 60 1 60 60 0 0 109 M2UBD9 Phage-like element PBSX protein xkdW OS=Bacillus subtilis MB73/2 GN=xkdW PE=4 SV=1
7 : N0DAC3_BACIU 1.00 1.00 1 60 1 60 60 0 0 109 N0DAC3 Uncharacterized protein OS=Bacillus subtilis BEST7003 GN=xkdW PE=4 SV=1
8 : V5MQ36_BACIU 1.00 1.00 1 60 1 60 60 0 0 109 V5MQ36 Phage-like element PBSX protein xkdW OS=Bacillus subtilis PY79 GN=U712_06650 PE=4 SV=1
9 : W9TE71_BACIU 1.00 1.00 1 60 1 60 60 0 0 109 W9TE71 Phage portal protein OS=Bacillus subtilis QH-1 GN=Y647_13425 PE=4 SV=1
10 : XKDW_BACSU 2HG7 1.00 1.00 1 60 1 60 60 0 0 109 P54342 Phage-like element PBSX protein XkdW OS=Bacillus subtilis (strain 168) GN=xkdW PE=1 SV=1
11 : G4P2L2_BACIU 0.98 1.00 1 60 1 60 60 0 0 109 G4P2L2 Uncharacterized protein OS=Bacillus subtilis subsp. subtilis str. RO-NN-1 GN=I33_1436 PE=4 SV=1
12 : D4FVJ3_BACNB 0.92 0.98 1 60 1 60 60 0 0 109 D4FVJ3 Putative uncharacterized protein xkdW OS=Bacillus subtilis subsp. natto (strain BEST195) GN=xkdW PE=4 SV=1
13 : U1ZE10_9BACI 0.92 0.98 1 60 1 60 60 0 0 109 U1ZE10 Phage portal protein OS=Bacillus sp. EGD-AK10 GN=N880_02790 PE=4 SV=1
14 : G4NTK3_BACPT 0.85 0.95 1 60 1 60 60 0 0 109 G4NTK3 Uncharacterized protein OS=Bacillus subtilis subsp. spizizenii (strain TU-B-10) GN=GYO_0248 PE=4 SV=1
15 : F4E6B2_BACAM 0.73 0.90 1 60 1 60 60 0 0 108 F4E6B2 Uncharacterized protein OS=Bacillus amyloliquefaciens TA208 GN=yomQ1 PE=4 SV=1
16 : F4ES31_BACAM 0.73 0.90 1 60 1 60 60 0 0 108 F4ES31 Uncharacterized protein OS=Bacillus amyloliquefaciens LL3 GN=LL3_01376 PE=4 SV=1
17 : G0INM8_BACAM 0.73 0.90 1 60 1 60 60 0 0 108 G0INM8 Uncharacterized protein OS=Bacillus amyloliquefaciens XH7 GN=xkdW PE=4 SV=1
18 : W7R6N2_BACLI 0.73 0.88 1 59 1 59 59 0 0 109 W7R6N2 Phage portal protein OS=Bacillus licheniformis S 16 GN=M769_0123480 PE=4 SV=1
19 : D5MVD8_BACPN 0.71 0.88 2 60 1 59 59 0 0 108 D5MVD8 Uncharacterized protein OS=Bacillus subtilis subsp. spizizenii ATCC 6633 GN=BSU6633_00739 PE=4 SV=1
20 : E0U1U2_BACPZ 0.71 0.88 2 60 1 59 59 0 0 108 E0U1U2 Uncharacterized protein OS=Bacillus subtilis subsp. spizizenii (strain ATCC 23059 / NRRL B-14472 / W23) GN=zkdW PE=4 SV=1
21 : G4NS18_BACPT 0.71 0.88 2 60 1 59 59 0 0 108 G4NS18 Uncharacterized protein OS=Bacillus subtilis subsp. spizizenii (strain TU-B-10) GN=GYO_1592 PE=4 SV=1
22 : I0F378_9BACI 0.71 0.88 2 60 1 59 59 0 0 108 I0F378 ZkdW OS=Bacillus sp. JS GN=MY9_1397 PE=4 SV=1
23 : L0CYI6_BACIU 0.70 0.88 1 60 1 60 60 0 0 109 L0CYI6 Phage-like element PBSX protein XkdW OS=Bacillus subtilis subsp. subtilis str. BSP1 GN=A7A1_1419 PE=4 SV=1
24 : M4XA74_BACIU 0.68 0.88 1 59 1 59 59 0 0 109 M4XA74 Uncharacterized protein OS=Bacillus subtilis subsp. subtilis str. BAB-1 GN=I653_06535 PE=4 SV=1
25 : M4KXJ7_BACIU 0.67 0.88 2 59 1 58 58 0 0 108 M4KXJ7 Uncharacterized protein OS=Bacillus subtilis XF-1 GN=xkdW PE=4 SV=1
26 : I4VDJ3_9BACI 0.65 0.78 1 60 1 60 60 0 0 109 I4VDJ3 Uncharacterized protein OS=Bacillus sp. M 2-6 GN=BAME_14810 PE=4 SV=1
27 : R4JQB6_BACPU 0.65 0.78 1 60 1 60 60 0 0 109 R4JQB6 Uncharacterized protein OS=Bacillus pumilus GN=PBP180_0031 PE=4 SV=1
28 : A8FGN6_BACP2 0.63 0.82 1 60 1 60 60 0 0 109 A8FGN6 Hypothetical bacteriophage protein OS=Bacillus pumilus (strain SAFR-032) GN=BPUM_2747 PE=4 SV=1
29 : B4AHI3_BACPU 0.63 0.78 1 60 1 60 60 0 0 109 B4AHI3 Uncharacterized protein OS=Bacillus pumilus ATCC 7061 GN=BAT_0183 PE=4 SV=1
30 : E3DX15_BACA1 0.63 0.85 1 60 1 60 60 0 0 109 E3DX15 Uncharacterized protein OS=Bacillus atrophaeus (strain 1942) GN=BATR1942_04055 PE=4 SV=1
31 : I4XFN5_BACAT 0.63 0.85 1 60 1 60 60 0 0 109 I4XFN5 Uncharacterized protein OS=Bacillus atrophaeus C89 GN=UY9_12549 PE=4 SV=1
32 : K2NG98_9BACI 0.63 0.77 1 60 1 60 60 0 0 109 K2NG98 Uncharacterized protein OS=Bacillus sp. HYC-10 GN=BA1_17490 PE=4 SV=1
33 : W8QQY5_BACPU 0.62 0.75 1 60 1 60 60 0 0 109 W8QQY5 Phage portal protein OS=Bacillus pumilus GN=BW16_14920 PE=4 SV=1
34 : E8VDV2_BACST 0.56 0.79 1 60 1 62 62 1 2 111 E8VDV2 Uncharacterized protein OS=Bacillus subtilis (strain BSn5) GN=BSn5_03595 PE=4 SV=1
35 : M1U4L2_BACIU 0.56 0.79 1 60 1 62 62 1 2 111 M1U4L2 Skin element YqcD OS=Bacillus subtilis subsp. subtilis 6051-HGW GN=yqcD PE=4 SV=1
36 : N0DDP7_BACIU 0.56 0.79 1 60 1 62 62 1 2 111 N0DDP7 Uncharacterized protein OS=Bacillus subtilis BEST7003 GN=yqcD PE=4 SV=1
37 : W9U4V5_BACIU 0.56 0.79 1 60 1 62 62 1 2 111 W9U4V5 Phage portal protein OS=Bacillus subtilis QH-1 GN=Y647_08105 PE=4 SV=1
38 : YQCD_BACSU 0.56 0.79 1 60 1 62 62 1 2 111 P45939 Uncharacterized protein YqcD OS=Bacillus subtilis (strain 168) GN=yqcD PE=4 SV=1
39 : W8IT81_BACAM 0.55 0.87 1 60 1 62 62 1 2 112 W8IT81 Phage portal protein OS=Bacillus amyloliquefaciens subsp. plantarum TrigoCor1448 GN=AJ82_01045 PE=4 SV=1
40 : U2AN52_9BACI 0.53 0.79 1 60 1 62 62 1 2 111 U2AN52 Phage portal protein OS=Bacillus sp. EGD-AK10 GN=N880_06555 PE=4 SV=1
41 : Q65KF0_BACLD 0.42 0.63 1 57 1 59 59 1 2 98 Q65KF0 Phage related protein OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=xkdW PE=4 SV=1
42 : N0AKY1_9BACI 0.40 0.63 1 57 1 57 57 0 0 90 N0AKY1 Uncharacterized protein OS=Bacillus sp. 1NLA3E GN=B1NLA3E_01275 PE=4 SV=1
## ALIGNMENTS 1 - 42
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A M 0 0 90 38 0 MMMMMMMMMMMMMMMMMM MM MMMMMMMMMMMMMMMMM
2 2 A I > - 0 0 60 43 70 IIIIIIIIIIIIIIVVVIMMMMMMMIIIIIIIINNNNNNNNN
3 3 A L H > S+ 0 0 17 43 27 LLLLLLLLLLLLLLLLLLIIIIIIILLLLIILLIIIIIIILL
4 4 A Y H > S+ 0 0 92 43 81 YYYYYYYYYYYYYYFFFYAAAAAAAYYYYYYYYGGGGGGGAF
5 5 A D H > S+ 0 0 57 43 34 DDDDDDDDDDDDDDDDDDEEEEEEEEEEEDDEEEEEEEEELK
6 6 A A H X S+ 0 0 2 43 19 AAAAAAAAAAAAAAVVVAAAAAAAAAAAAAAAAAAAAAAAAC
7 7 A I H X S+ 0 0 2 43 2 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIVI
8 8 A M H < S+ 0 0 55 43 49 MMMMMMMMMMMMMMLLLMMMMLMMMKKKKKKKKLLLLLLLKI
9 9 A Y H < S+ 0 0 84 43 4 YYYYYYYYYYYYYYYYYYYYYYFFFYYYYWWYYFFFFFYFYY
10 10 A K H < S+ 0 0 104 43 23 KKKKKKKKKKKKKKKKKKKKKKKKKKKQKKKKKKKKKKKKLL
11 11 A Y >< + 0 0 63 43 7 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYFH
12 12 A P T 3 S+ 0 0 95 43 9 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPKKPPPPPPPPPPP
13 13 A N T 3 S+ 0 0 157 43 61 NNNNNNNNNNNDDNDDDENNNSSSSDDDDDDDATTTTTDTDS
14 14 A A < - 0 0 13 43 18 AAAAAAAAAAAAAAAAAATTTAAAAAAAAAAAAAAAAAAAAL
15 15 A V >>> - 0 0 72 43 72 VVVVVVVVVVVVVVVVVIDDDDDDDDDDDDDDDDDDDDDDIE
16 16 A S B 345S+a 20 0A 15 43 43 SSSSSSSSSSSPPPPPPPPPPPPPPPPPPPPPPPPPPPPPIA
17 17 A R T 345S+ 0 0 206 43 88 RRRRRRRRRRRRRRLLLKTTTTTTTQQQQTTQQTTTTTTTGN
18 18 A K T <45S+ 0 0 142 43 15 KKKKKKKKKKKKKNKKKKKKKKRRRKKKKKKKKKKKKKKKEK
19 19 A D T <5S+ 0 0 45 43 0 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
20 20 A F E - 0 0 78 43 13 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTSN
43 43 A Q H > S+ 0 0 116 43 60 QQQQQQQQQQQQQQKKKKQQQQQQQVVEAKKATEEEEEEEEE
44 44 A A H > S+ 0 0 62 43 62 AAAAAAAAAAAKKEEEEEKKKKKKKEEKKEEEEAAAAAAAKA
45 45 A E H > S+ 0 0 80 43 12 EEEEEEEEEEEEEEQQQEEEEEEEEEEEEDDEEEEEEEDEEE
46 46 A L H X S+ 0 0 26 43 4 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLI
47 47 A E H X S+ 0 0 95 43 57 EEEEEEEEEEEEEQEEEQEEEEEEEKKKKQQKKKKKKKQKQI
48 48 A T H X S+ 0 0 54 43 69 TTTTTTTTTTSTTAAAALSSSSTSSEKAEAAEKTTTTTASEQ
49 49 A W H X S+ 0 0 13 43 25 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWAA
50 50 A W H X S+ 0 0 75 43 0 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
51 51 A E H X S+ 0 0 114 43 3 EEEEEEEEEEEEEEEEEEEEEEEEEEEEDEEEEEEEEEDEEE
52 52 A E H X S+ 0 0 93 43 13 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAEEEEEEEENQ
53 53 A L H < S+ 0 0 19 43 56 LLLLLLLLLLLLLSLLLSLLLLLLLCSSSLLSSLLLLLLLYI
54 54 A Q H < S+ 0 0 100 43 27 QQQQQQQQQQQQQKQQQKQQQQQQQQQQQQQQKQQQQQKQLK
55 55 A K H < S+ 0 0 190 43 69 KKKKKKKKKKKKKSKKKKKKKKKKKIASIQQIASSSSSQSED
56 56 A N S < S- 0 0 97 43 39 NNNNNNNNNNNNNNNNNSNNNNNNNNNNNNNNNTTTTTNINI
57 57 A P - 0 0 99 43 25 PPPPPPPPPPPPPPPPPQPPPPPPPPPPPPPPPSSSSSPSPP
58 58 A P - 0 0 72 41 54 PPPPPPPPPPPPPAPPPLPPPPPPPRRRRPPRRAAAAAPA
59 59 A Y 0 0 240 41 0 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYFY
60 60 A E 0 0 214 38 21 EEEEEEEEEEEEEEDDD EEEEE QEQQEEQQEEEEEEE
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38 0 0 0.000 0 1.00
2 2 A 7 0 56 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 43 0 0 1.134 37 0.30
3 3 A 0 63 37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.660 22 0.72
4 4 A 0 0 0 0 9 0 56 16 19 0 0 0 0 0 0 0 0 0 0 0 43 0 0 1.155 38 0.19
5 5 A 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 47 0 49 43 0 0 0.881 29 0.65
6 6 A 7 0 0 0 0 0 0 0 91 0 0 0 2 0 0 0 0 0 0 0 43 0 0 0.362 12 0.80
7 7 A 2 0 98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.110 3 0.98
8 8 A 0 26 2 51 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 43 0 0 1.106 36 0.50
9 9 A 0 0 0 0 21 5 74 0 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.690 23 0.95
10 10 A 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 93 2 0 0 0 43 0 0 0.297 9 0.77
11 11 A 0 0 0 0 2 0 95 0 0 0 0 0 0 2 0 0 0 0 0 0 43 0 0 0.220 7 0.93
12 12 A 0 0 0 0 0 0 0 0 0 95 0 0 0 0 0 5 0 0 0 0 43 0 0 0.188 6 0.91
13 13 A 0 0 0 0 0 0 0 0 2 0 12 14 0 0 0 0 0 2 37 33 43 0 0 1.433 47 0.38
14 14 A 0 2 0 0 0 0 0 0 91 0 0 7 0 0 0 0 0 0 0 0 43 0 0 0.362 12 0.82
15 15 A 42 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 51 43 0 0 0.938 31 0.27
16 16 A 0 0 2 0 0 0 0 0 2 67 28 0 0 0 0 0 0 0 0 0 43 0 0 0.797 26 0.57
17 17 A 0 7 0 0 0 0 0 2 0 0 0 37 0 0 35 2 14 0 2 0 43 0 0 1.458 48 0.11
18 18 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 88 0 2 2 0 43 0 0 0.470 15 0.84
19 19 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 43 0 0 0.000 0 1.00
20 20 A 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.000 0 1.00
21 21 A 9 0 42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49 0 0 43 0 0 0.935 31 0.28
22 22 A 30 60 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.887 29 0.70
23 23 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60 2 37 0 0 0 43 0 0 0.760 25 0.54
24 24 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 95 5 43 0 0 0.188 6 0.91
25 25 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 84 43 0 0 0.444 14 0.81
26 26 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.000 0 1.00
27 27 A 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 14 47 37 43 0 0 1.086 36 0.57
28 28 A 0 0 0 0 0 0 0 93 0 0 0 0 0 0 0 0 0 7 0 0 43 0 8 0.253 8 0.90
29 29 A 0 0 0 0 0 0 0 0 0 2 95 0 0 0 0 0 2 0 0 0 43 0 0 0.220 7 0.85
30 30 A 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.000 0 1.00
31 31 A 0 2 98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.110 3 0.98
32 32 A 0 2 0 0 0 0 0 0 37 0 0 0 0 0 0 0 0 47 14 0 43 0 0 1.086 36 0.34
33 33 A 0 0 0 0 0 0 0 0 0 0 0 2 0 0 2 42 0 53 0 0 43 0 0 0.874 29 0.47
34 34 A 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.000 0 1.00
35 35 A 0 0 0 0 0 0 0 0 0 0 0 0 0 14 2 0 0 0 84 0 43 0 0 0.511 17 0.73
36 36 A 0 74 23 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.647 21 0.70
37 37 A 0 0 0 0 0 0 0 0 0 0 2 0 0 0 74 0 0 0 7 16 43 0 0 0.789 26 0.48
38 38 A 14 2 0 0 0 0 0 2 77 0 5 0 0 0 0 0 0 0 0 0 43 0 0 0.796 26 0.60
39 39 A 0 0 0 0 0 0 0 0 0 98 0 0 0 0 0 2 0 0 0 0 43 0 0 0.110 3 0.95
40 40 A 0 30 53 0 0 0 0 0 0 0 0 0 0 0 0 12 2 2 0 0 43 0 0 1.121 37 0.41
41 41 A 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 43 0 0 0.000 0 1.00
42 42 A 0 0 0 0 0 0 0 0 0 0 2 95 0 0 0 0 0 0 2 0 43 0 0 0.220 7 0.86
43 43 A 5 0 0 0 0 0 0 0 5 0 0 2 0 0 0 14 51 23 0 0 43 0 0 1.330 44 0.40
44 44 A 0 0 0 0 0 0 0 0 47 0 0 0 0 0 0 28 0 26 0 0 43 0 0 1.061 35 0.38
45 45 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 86 0 7 43 0 0 0.501 16 0.87
46 46 A 0 98 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.110 3 0.96
47 47 A 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 28 14 56 0 0 43 0 0 1.044 34 0.43
48 48 A 0 2 0 0 0 0 0 0 19 0 19 44 0 0 0 5 2 9 0 0 43 0 0 1.525 50 0.30
49 49 A 0 0 0 0 0 95 0 0 5 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.188 6 0.75
50 50 A 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.000 0 1.00
51 51 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 95 0 5 43 0 0 0.188 6 0.96
52 52 A 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 2 93 2 0 43 0 0 0.330 11 0.86
53 53 A 0 77 2 0 0 0 2 0 0 0 16 0 2 0 0 0 0 0 0 0 43 0 0 0.761 25 0.44
54 54 A 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 12 86 0 0 0 43 0 0 0.467 15 0.73
55 55 A 0 0 7 0 0 0 0 0 5 0 19 0 0 0 0 58 7 2 0 2 43 0 0 1.317 43 0.30
56 56 A 0 0 5 0 0 0 0 0 0 0 2 12 0 0 0 0 0 0 81 0 43 0 0 0.648 21 0.60
57 57 A 0 0 0 0 0 0 0 0 0 84 14 0 0 0 0 0 2 0 0 0 43 0 0 0.511 17 0.74
58 58 A 0 2 0 0 0 0 0 0 17 66 0 0 0 0 15 0 0 0 0 0 41 0 0 0.949 31 0.46
59 59 A 0 0 0 0 2 0 98 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.115 3 1.00
60 60 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 79 0 8 38 0 0 0.654 21 0.79
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
34 29 29 2 gTPs
35 29 29 2 gTPs
36 29 29 2 gTPs
37 29 29 2 gTPs
38 29 29 2 gTPs
39 29 29 2 gTPs
40 29 29 2 gTPs
41 29 29 2 gRGq
//