Complet list of 2h8b hssp file
Complete list of 2h8b.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 2H8B
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-20
HEADER HORMONE/GROWTH FACTOR 07-JUN-06 2H8B
COMPND MOL_ID: 1; MOLECULE: INSULIN-LIKE 3; CHAIN: B; FRAGMENT: INSULIN-LIKE
SOURCE MOL_ID: 1; SYNTHETIC: YES; OTHER_DETAILS: FOR THIS STUDY THE PEPTIDE H
AUTHOR K.J.ROSENGREN,D.J.CRAIK,N.L.DALY
DBREF 2H8B A 1 26 UNP P51460 INSL3_HUMAN 106 131
DBREF 2H8B B 1 31 UNP P51460 INSL3_HUMAN 25 55
SEQLENGTH 57
NCHAIN 2 chain(s) in 2H8B data set
NALIGN 75
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : H2QFR9_PANTR 1.00 1.00 1 31 25 55 31 0 0 131 H2QFR9 Insulin-like 3 OS=Pan troglodytes GN=INSL3 PE=3 SV=1
2 : H2QFR9_PANTR 1.00 1.00 33 58 106 131 26 0 0 131 H2QFR9 Insulin-like 3 OS=Pan troglodytes GN=INSL3 PE=3 SV=1
3 : INSL3_HUMAN 2K6U 1.00 1.00 1 31 25 55 31 0 0 131 P51460 Insulin-like 3 OS=Homo sapiens GN=INSL3 PE=1 SV=2
4 : INSL3_HUMAN 2K6U 1.00 1.00 33 58 106 131 26 0 0 131 P51460 Insulin-like 3 OS=Homo sapiens GN=INSL3 PE=1 SV=2
5 : INSL3_PANTR 1.00 1.00 1 31 25 55 31 0 0 131 Q5CZK3 Insulin-like 3 OS=Pan troglodytes GN=INSL3 PE=3 SV=1
6 : INSL3_PANTR 1.00 1.00 33 58 106 131 26 0 0 131 Q5CZK3 Insulin-like 3 OS=Pan troglodytes GN=INSL3 PE=3 SV=1
7 : M0QXQ3_HUMAN 1.00 1.00 1 31 25 55 31 0 0 71 M0QXQ3 Insulin-like 3 (Fragment) OS=Homo sapiens GN=INSL3 PE=4 SV=1
8 : F6WHM7_CALJA 0.97 0.97 1 31 25 55 31 0 0 161 F6WHM7 Insulin-like 3 OS=Callithrix jacchus GN=INSL3 PE=4 SV=1
9 : INSL3_CALJA 0.97 0.97 1 31 25 55 31 0 0 131 O97937 Insulin-like 3 OS=Callithrix jacchus GN=INSL3 PE=2 SV=1
10 : D7RNQ7_MACMU 0.96 1.00 33 58 106 131 26 0 0 131 D7RNQ7 Insulin-like 3 OS=Macaca mulatta PE=2 SV=1
11 : G1R1N0_NOMLE 0.94 0.97 1 31 25 55 31 0 0 157 G1R1N0 Uncharacterized protein OS=Nomascus leucogenys GN=JAK3 PE=4 SV=1
12 : INSL3_CALJA 0.92 1.00 33 57 107 131 25 0 0 131 O97937 Insulin-like 3 OS=Callithrix jacchus GN=INSL3 PE=2 SV=1
13 : INSL3_PIG 0.92 0.96 33 57 106 130 25 0 0 131 P51461 Insulin-like 3 OS=Sus scrofa GN=INSL3 PE=2 SV=1
14 : L5LCI6_MYODS 0.90 0.90 1 31 25 55 31 0 0 134 L5LCI6 Insulin-like 3 OS=Myotis davidii GN=MDA_GLEAN10002975 PE=3 SV=1
15 : H0XJ08_OTOGA 0.89 0.93 4 31 28 55 28 0 0 131 H0XJ08 Uncharacterized protein OS=Otolemur garnettii GN=INSL3 PE=3 SV=1
16 : H0XJR6_OTOGA 0.89 0.93 4 31 28 55 28 0 0 154 H0XJR6 Uncharacterized protein OS=Otolemur garnettii GN=INSL3 PE=4 SV=1
17 : Q9GK47_OTOCR 0.89 0.93 4 31 28 55 28 0 0 131 Q9GK47 Relaxin-like protein OS=Otolemur crassicaudatus PE=2 SV=1
18 : G1QG64_MYOLU 0.88 0.92 33 57 110 134 25 0 0 135 G1QG64 Uncharacterized protein OS=Myotis lucifugus GN=INSL3 PE=3 SV=1
19 : G3U3G3_LOXAF 0.88 0.88 6 31 31 56 26 0 0 133 G3U3G3 Uncharacterized protein OS=Loxodonta africana GN=INSL3 PE=3 SV=1
20 : INSL3_CANFA 0.88 1.00 33 57 107 131 25 0 0 132 Q6X7V3 Insulin-like 3 OS=Canis familiaris GN=INSL3 PE=2 SV=1
21 : L5L6A2_PTEAL 0.88 0.92 33 57 106 130 25 0 0 131 L5L6A2 Insulin-like 3 OS=Pteropus alecto GN=PAL_GLEAN10006665 PE=3 SV=1
22 : L5LCI6_MYODS 0.88 0.92 33 57 109 133 25 0 0 134 L5LCI6 Insulin-like 3 OS=Myotis davidii GN=MDA_GLEAN10002975 PE=3 SV=1
23 : S9YWR6_9CETA 0.88 0.96 33 57 1060 1084 25 0 0 1085 S9YWR6 Tyrosine-protein kinase JAK3-like protein OS=Camelus ferus GN=CB1_000172051 PE=4 SV=1
24 : G1QG64_MYOLU 0.87 0.90 1 31 25 55 31 0 0 135 G1QG64 Uncharacterized protein OS=Myotis lucifugus GN=INSL3 PE=3 SV=1
25 : INSL3_CANFA 0.87 0.93 1 30 27 56 30 0 0 132 Q6X7V3 Insulin-like 3 OS=Canis familiaris GN=INSL3 PE=2 SV=1
26 : J9P762_CANFA 0.87 0.93 1 30 27 56 30 0 0 127 J9P762 Insulin-like 3 OS=Canis familiaris GN=INSL3 PE=4 SV=1
27 : M3YWI2_MUSPF 0.87 0.97 1 30 25 54 30 0 0 130 M3YWI2 Uncharacterized protein OS=Mustela putorius furo GN=INSL3 PE=3 SV=1
28 : S7N5R5_MYOBR 0.87 0.90 1 31 25 55 31 0 0 134 S7N5R5 Insulin-like 3 OS=Myotis brandtii GN=D623_10018627 PE=4 SV=1
29 : Q4KMB3_RAT 0.86 0.90 3 31 22 50 29 0 0 71 Q4KMB3 Insl3 protein OS=Rattus norvegicus GN=Insl3 PE=4 SV=1
30 : H0XJ08_OTOGA 0.85 0.96 33 58 106 131 26 0 0 131 H0XJ08 Uncharacterized protein OS=Otolemur garnettii GN=INSL3 PE=3 SV=1
31 : D7RNQ7_MACMU 0.84 0.94 1 31 25 55 31 0 0 131 D7RNQ7 Insulin-like 3 OS=Macaca mulatta PE=2 SV=1
32 : F7DUE3_HORSE 0.84 0.96 33 57 74 98 25 0 0 99 F7DUE3 Uncharacterized protein (Fragment) OS=Equus caballus GN=INSL3 PE=4 SV=1
33 : INSL3_BOVIN 0.84 0.92 33 57 107 131 25 0 0 132 O77801 Insulin-like 3 OS=Bos taurus GN=INSL3 PE=1 SV=1
34 : L8IED0_9CETA 0.84 0.92 33 57 107 131 25 0 0 132 L8IED0 Insulin-like 3 OS=Bos mutus GN=M91_16402 PE=3 SV=1
35 : M3YWI2_MUSPF 0.84 0.92 33 57 105 129 25 0 0 130 M3YWI2 Uncharacterized protein OS=Mustela putorius furo GN=INSL3 PE=3 SV=1
36 : Q4TUB8_SHEEP 0.84 0.92 33 57 106 130 25 0 0 131 Q4TUB8 Insulin-like 3 OS=Ovis aries GN=INSL3 PE=3 SV=1
37 : Q9GK47_OTOCR 0.84 0.96 33 57 106 130 25 0 0 131 Q9GK47 Relaxin-like protein OS=Otolemur crassicaudatus PE=2 SV=1
38 : Q9N0T8_DAMDA 0.84 0.92 33 57 106 130 25 0 0 131 Q9N0T8 Relaxin-like protein OS=Dama dama PE=2 SV=1
39 : Q9N0Z8_CAPHI 0.84 0.92 33 57 106 130 25 0 0 131 Q9N0Z8 RLF OS=Capra hircus PE=2 SV=1
40 : V5M3I9_SHEEP 0.84 0.92 33 57 42 66 25 0 0 67 V5M3I9 INSL3 protein (Fragment) OS=Ovis aries PE=4 SV=1
41 : G1LW90_AILME 0.83 0.90 1 29 25 53 29 0 0 128 G1LW90 Uncharacterized protein OS=Ailuropoda melanoleuca GN=INSL3 PE=3 SV=1
42 : G3H4C7_CRIGR 0.83 0.97 2 31 25 54 30 0 0 126 G3H4C7 Insulin-like 3 OS=Cricetulus griseus GN=I79_005128 PE=3 SV=1
43 : INSL3_RAT 0.83 0.87 2 31 21 50 30 0 0 128 Q9WUK0 Insulin-like 3 OS=Rattus norvegicus GN=Insl3 PE=2 SV=2
44 : M3WY35_FELCA 0.83 0.93 1 30 26 55 30 0 0 131 M3WY35 Uncharacterized protein OS=Felis catus GN=INSL3 PE=3 SV=1
45 : L5L6A2_PTEAL 0.81 0.90 1 31 25 55 31 0 0 131 L5L6A2 Insulin-like 3 OS=Pteropus alecto GN=PAL_GLEAN10006665 PE=3 SV=1
46 : G1LW90_AILME 0.80 0.96 33 57 103 127 25 0 0 128 G1LW90 Uncharacterized protein OS=Ailuropoda melanoleuca GN=INSL3 PE=3 SV=1
47 : G3U3G3_LOXAF 0.80 0.92 33 57 108 132 25 0 0 133 G3U3G3 Uncharacterized protein OS=Loxodonta africana GN=INSL3 PE=3 SV=1
48 : INSL3_MOUSE 0.80 0.87 2 31 21 50 30 0 0 122 O09107 Insulin-like 3 OS=Mus musculus GN=Insl3 PE=2 SV=2
49 : M3WY35_FELCA 0.80 1.00 33 57 106 130 25 0 0 131 M3WY35 Uncharacterized protein OS=Felis catus GN=INSL3 PE=3 SV=1
50 : Q5RL10_MOUSE 0.80 0.87 2 31 21 50 30 0 0 122 Q5RL10 Insulin-like 3 OS=Mus musculus GN=Insl3 PE=2 SV=1
51 : Q6U6J4_CAPCA 0.80 0.88 33 57 106 130 25 0 0 131 Q6U6J4 Relaxin-like peptide hormone INSL3 OS=Capreolus capreolus PE=2 SV=1
52 : F7DUE3_HORSE 0.79 0.83 7 30 1 23 24 1 1 99 F7DUE3 Uncharacterized protein (Fragment) OS=Equus caballus GN=INSL3 PE=4 SV=1
53 : D2GV16_AILME 0.77 0.94 1 31 25 55 31 0 0 159 D2GV16 Putative uncharacterized protein (Fragment) OS=Ailuropoda melanoleuca GN=PANDA_000533 PE=4 SV=1
54 : INSL3_PIG 0.77 0.84 1 31 25 55 31 0 0 131 P51461 Insulin-like 3 OS=Sus scrofa GN=INSL3 PE=2 SV=1
55 : INSL3_BOVIN 0.74 0.87 1 31 25 55 31 0 0 132 O77801 Insulin-like 3 OS=Bos taurus GN=INSL3 PE=1 SV=1
56 : L8IED0_9CETA 0.74 0.87 1 31 25 55 31 0 0 132 L8IED0 Insulin-like 3 OS=Bos mutus GN=M91_16402 PE=3 SV=1
57 : Q4TUB8_SHEEP 0.74 0.87 1 31 25 55 31 0 0 131 Q4TUB8 Insulin-like 3 OS=Ovis aries GN=INSL3 PE=3 SV=1
58 : Q6U6J4_CAPCA 0.74 0.87 1 31 25 55 31 0 0 131 Q6U6J4 Relaxin-like peptide hormone INSL3 OS=Capreolus capreolus PE=2 SV=1
59 : Q9N0T8_DAMDA 0.74 0.90 1 31 25 55 31 0 0 131 Q9N0T8 Relaxin-like protein OS=Dama dama PE=2 SV=1
60 : H0W449_CAVPO 0.73 0.93 2 31 26 55 30 0 0 132 H0W449 Uncharacterized protein OS=Cavia porcellus GN=INSL3 PE=3 SV=1
61 : L9KWU1_TUPCH 0.73 0.83 2 31 26 55 30 0 0 124 L9KWU1 Insulin-like 3 OS=Tupaia chinensis GN=TREES_T100014730 PE=4 SV=1
62 : G3H4C7_CRIGR 0.72 0.88 33 57 101 125 25 0 0 126 G3H4C7 Insulin-like 3 OS=Cricetulus griseus GN=I79_005128 PE=3 SV=1
63 : INSL3_MOUSE 0.72 0.88 33 57 97 121 25 0 0 122 O09107 Insulin-like 3 OS=Mus musculus GN=Insl3 PE=2 SV=2
64 : Q5RL10_MOUSE 0.72 0.88 33 57 97 121 25 0 0 122 Q5RL10 Insulin-like 3 OS=Mus musculus GN=Insl3 PE=2 SV=1
65 : Q9N0Z8_CAPHI 0.71 0.87 1 31 25 55 31 0 0 131 Q9N0Z8 RLF OS=Capra hircus PE=2 SV=1
66 : F7BJS2_MONDO 0.69 0.88 4 29 33 58 26 0 0 144 F7BJS2 Uncharacterized protein (Fragment) OS=Monodelphis domestica GN=INSL3 PE=3 SV=1
67 : H0W449_CAVPO 0.68 0.88 33 57 107 131 25 0 0 132 H0W449 Uncharacterized protein OS=Cavia porcellus GN=INSL3 PE=3 SV=1
68 : INSL3_RAT 0.68 0.84 33 57 103 127 25 0 0 128 Q9WUK0 Insulin-like 3 OS=Rattus norvegicus GN=Insl3 PE=2 SV=2
69 : L9KWU1_TUPCH 0.68 0.88 33 57 99 123 25 0 0 124 L9KWU1 Insulin-like 3 OS=Tupaia chinensis GN=TREES_T100014730 PE=4 SV=1
70 : G3VPC0_SARHA 0.63 0.85 2 28 24 50 27 0 0 141 G3VPC0 Uncharacterized protein (Fragment) OS=Sarcophilus harrisii GN=INSL3 PE=4 SV=1
71 : Q6X7V2_CANFA 0.63 0.73 1 30 27 54 30 1 2 105 Q6X7V2 Insulin-like factor 3 OS=Canis familiaris GN=INSL3 PE=4 SV=1
72 : G3VPC0_SARHA 0.61 0.87 35 57 118 140 23 0 0 141 G3VPC0 Uncharacterized protein (Fragment) OS=Sarcophilus harrisii GN=INSL3 PE=4 SV=1
73 : F7BJS2_MONDO 0.58 0.92 34 57 120 143 24 0 0 144 F7BJS2 Uncharacterized protein (Fragment) OS=Monodelphis domestica GN=INSL3 PE=3 SV=1
74 : B2XQX7_ANGJA 0.50 0.73 2 31 21 50 30 0 0 150 B2XQX7 Relaxin 3b OS=Anguilla japonica GN=Rln3b PE=2 SV=1
75 : E1CJL7_ANGJA 0.50 0.73 2 31 21 50 30 0 0 150 E1CJL7 Relaxin 3b OS=Anguilla japonica GN=RLN3b PE=3 SV=1
## ALIGNMENTS 1 - 70
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 B P 0 0 88 27 34 P P P PPP P P PPPPP P P PS PPAAAAA A
2 2 B T - 0 0 102 36 51 T T T TTT T T TAAAT S ASPAA P P AAAAAAAAT A S
3 3 B P S S+ 0 0 140 37 33 P P P PPP P P PPPPPP P PPPPP P P PQQQQQQPP Q R
4 4 B E - 0 0 53 41 11 E E E EEE E EEEE EGGEEE D EEEEE E E EEEEEEEEE EE E
5 5 B M - 0 0 176 41 75 M M M MMM M GTTT GAAAGA M AAAAA A A AAAAAAVTA AE E
6 6 B R - 0 0 91 42 57 R R R RRR R PRRR P PRRRPR P RRRPP R R RPPPPPPRP PP P
7 7 B E B -A 47 0A 50 43 44 E E E EEE E EEEE E EEEEEA D EDAEE A A EEEEEEEEDE EQ Q
8 8 B K - 0 0 111 43 12 K K K KKK K KKKK K KKKKKK K KKKKK K K MKKKKKKKQQ KK K
9 9 B L > + 0 0 0 43 0 L L L LLL L LLLL L LLLLLL L LLLLL L L LLLLLLLLLL LL L
10 10 B a T > 5 - 0 0 52 43 4 C C C CCC C CCCC C CCCCCC V CCCCC C C CCCCCCCCCC CC C
11 11 B G T >>5S+ 0 0 62 43 10 G G G GGG G GGGG G GGGGGG G GGGGG G G VGGGGGGGGG GA A
12 12 B H H 3>5S+ 0 0 130 43 20 H H H HHH H HHHH A HHHHHH H HHHHH H H HHHHHHHHRH HH H
13 13 B H H <>5S+ 0 0 84 43 30 H H H HHH R HHHH H HHHHHH H HHHHH H H HHHHHHHHHY HR N
14 14 B F H <>S+ 0 0 26 43 9 L L L LLL L LLLL L LLLLLL L LLLLL L L LLLLLLLLLL LL L
19 19 B V H X5S+ 0 0 35 43 5 V V V VVV V VVVV V VVVVVV V VVVVV V V VVVVVVVVVV VV V
20 20 B R H <5S+ 0 0 141 43 37 R R R RRR R RRRR R RRRRRR R RRRRR R R RRRRRRRRRR RQ R
21 21 B V H <5S+ 0 0 24 43 52 V V V VVV V VLLL V VVVLVV V LVVVV V V MLLLLLLLVA LV A
22 22 B b H <5S- 0 0 35 43 0 C C C CCC C CCCC C CCCCCC C CCCCC C C CCCCCCCCCC CC C
23 23 B G X< - 0 0 20 43 4 G G G GGG G GGGG G GGGGGG G GGGGG G G GGGGGGGGGG GG G
24 24 B G T >4 S+ 0 0 43 43 0 G G G GGG G GGGG G GGGGGG G GGGGG G G GGGGGGGGGG GG G
25 25 B P T 34 S+ 0 0 136 42 15 P P P PPP P PPPP P PPPPPP P PPPPP P P PPPPPPPPPP PP P
26 26 B R T 34 S+ 0 0 106 42 11 R R R RLL R RRRR R RRRRRR R RRRRR R R RRRRRRRRRR RR R
27 27 B W << + 0 0 26 43 0 W W W WWW W WWWW W WWWWWW W WWWWW W W WWWWWWWWWW WW W
28 28 B S S S- 0 0 115 43 39 S S S SSS S SSSS S SSSSSS S DSSSS S S SNSSSSSSSA SS A
29 29 B T S S+ 0 0 114 42 74 T T T TTT M PPPP P PSSSPP T GSPSL P P PVPSSSSSRP SP
30 30 B E 0 0 58 40 24 E E E EEE E EEEE E EEEEEE E EEEE E E EHEEEEEEEE E
31 31 B A 0 0 84 34 45 A A A AAA A AAAA A T TA A AA G A A SDEEDDDAG S
32 ! ! 0 0 0 0 0
33 1 A A 0 0 97 32 27 A A A A AA A AAAA A AAAAAAAAA AA A A SSS ASA
34 2 A A + 0 0 98 33 43 A A A A AA T AATA A ATTATATTT AA A T AAA QVA
35 3 A A - 0 0 36 34 22 A A A A AA A AAAA T AAAAATAAA AA A A AAA AAP
36 4 A T S S+ 0 0 159 34 66 T T T T ST T TVTT T AIITVTIIV AN A I TTT PTA
37 5 A N > - 0 0 76 34 26 N N N N NN N NNNN N NNNNNNNNN NN N N SNN SNN
38 6 A P H > S+ 0 0 67 34 17 P P P P PP P PPPP P PPPPPPPPP PP P P PAA PAP
39 7 A A H > S+ 0 0 41 34 28 A A A A AA A AAAA A AAAAAAAAA AA A A VVV AVA
40 8 A R H > S+ 0 0 129 34 48 R R R H RR R HRRR H HRRHRHRRR HQ H R HHH QHR
41 9 A Y H X>S+ 0 0 72 34 61 Y Y Y Y YH H YHHH R HHHHHRHHH HR F H QRR HRR
42 10 A c H <5S+ 0 0 4 34 0 C C C C CC C CCCC C CCCCCCCCC CC C C CCC CCC
43 11 A a H <5S+ 0 0 21 34 0 C C C C CC C CCCC C CCCCCCCCC CC C C CCC CCC
44 12 A L H <5S+ 0 0 86 34 17 L L L L LL L LLLL L LLLLLLLLL LL L L LLL LLL
45 13 A S T <5S- 0 0 31 34 54 S S S S SS S SSSS S SSSSSSSSS SS S I TTT STF
46 14 A G < - 0 0 0 34 0 G G G G GG G GGGG G GGGGGGGGG GG G G GGG GGG
47 15 A c B -A 7 0A 6 34 0 C C C C CC C CCCC C CCCCCCCCC CC C C CCC CCC
48 16 A T > - 0 0 18 34 18 T T T T ST T STTT T TTTTTTTTT ST T T TTT STT
49 17 A Q H > S+ 0 0 92 34 53 Q Q Q Q QR W RRWR R RRRRRRRRR RH R R QQQ HQQ
50 18 A Q H > S+ 0 0 77 34 11 Q Q Q Q QQ Q QQQQ Q QQQGQQQQQ QQ Q Q QQQ QQR
51 19 A D H 4 S+ 0 0 35 34 7 D D D D DD D DDDD D DDDDDDDDD DN H D DDD DDD
52 20 A L H >< S+ 0 0 4 34 0 L L L L LL L LLLL L LLLLLLLLL LL L L LLL LLL
53 21 A L H >< S+ 0 0 82 34 12 L L L L LL L LLLL L LLLLLLLLL LL L L LLL LLR
54 22 A T T 3< S+ 0 0 102 34 50 T T T T TT T TTTA T TTTTTTTTT TT T T HGG SGA
55 23 A L T < S+ 0 0 97 34 8 L L L L LL L LLLL L LLLLLLLLL LL L L LLL LLI
56 24 A b < - 0 0 32 34 0 C C C C CC C CCCC C CCCCCCCCC CC C C CCC CCC
57 25 A P 0 0 77 34 0 P P P P PP P PPPP P PPPPPPPPP PP P P PPP PPP
58 26 A Y 0 0 236 6 0 Y Y Y Y Y
## ALIGNMENTS 71 - 75
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....8....:....9....:....0....:....1....:....2....:....3....:....4
1 1 B P 0 0 88 27 34 P
2 2 B T - 0 0 102 36 51 A AA
3 3 B P S S+ 0 0 140 37 33 P PP
4 4 B E - 0 0 53 41 11 G EE
5 5 B M - 0 0 176 41 75 A FF
6 6 B R - 0 0 91 42 57 R GG
7 7 B E B -A 47 0A 50 43 44 E VV
8 8 B K - 0 0 111 43 12 K KK
9 9 B L > + 0 0 0 43 0 L LL
10 10 B a T > 5 - 0 0 52 43 4 C CC
11 11 B G T >>5S+ 0 0 62 43 10 G GG
12 12 B H H 3>5S+ 0 0 130 43 20 H RR
13 13 B H H <>5S+ 0 0 84 43 30 H EE
14 14 B F H <>S+ 0 0 26 43 9 L VV
19 19 B V H X5S+ 0 0 35 43 5 V II
20 20 B R H <5S+ 0 0 141 43 37 S FF
21 21 B V H <5S+ 0 0 24 43 52 C TT
22 22 B b H <5S- 0 0 35 43 0 C CC
23 23 B G X< - 0 0 20 43 4 S GG
24 24 B G T >4 S+ 0 0 43 43 0 G GG
25 25 B P T 34 S+ 0 0 136 42 15 . SS
26 26 B R T 34 S+ 0 0 106 42 11 . RR
27 27 B W << + 0 0 26 43 0 W WW
28 28 B S S S- 0 0 115 43 39 K RR
29 29 B T S S+ 0 0 114 42 74 D RR
30 30 B E 0 0 58 40 24 D AA
31 31 B A 0 0 84 34 45 AA
32 ! ! 0 0 0 0 0
33 1 A A 0 0 97 32 27
34 2 A A + 0 0 98 33 43 A
35 3 A A - 0 0 36 34 22 AN
36 4 A T S S+ 0 0 159 34 66 PS
37 5 A N > - 0 0 76 34 26 SS
38 6 A P H > S+ 0 0 67 34 17 PP
39 7 A A H > S+ 0 0 41 34 28 AA
40 8 A R H > S+ 0 0 129 34 48 KQ
41 9 A Y H X>S+ 0 0 72 34 61 HH
42 10 A c H <5S+ 0 0 4 34 0 CC
43 11 A a H <5S+ 0 0 21 34 0 CC
44 12 A L H <5S+ 0 0 86 34 17 SI
45 13 A S T <5S- 0 0 31 34 54 NN
46 14 A G < - 0 0 0 34 0 GG
47 15 A c B -A 7 0A 6 34 0 CC
48 16 A T > - 0 0 18 34 18 TT
49 17 A Q H > S+ 0 0 92 34 53 KK
50 18 A Q H > S+ 0 0 77 34 11 QQ
51 19 A D H 4 S+ 0 0 35 34 7 DD
52 20 A L H >< S+ 0 0 4 34 0 LL
53 21 A L H >< S+ 0 0 82 34 12 LL
54 22 A T T 3< S+ 0 0 102 34 50 AA
55 23 A L T < S+ 0 0 97 34 8 FF
56 24 A b < - 0 0 32 34 0 CC
57 25 A P 0 0 77 34 0 PP
58 26 A Y 0 0 236 6 0
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 B 0 0 0 0 0 0 0 0 22 74 4 0 0 0 0 0 0 0 0 0 27 0 0 0.679 22 0.65
2 2 B 0 0 0 0 0 0 0 0 50 8 8 33 0 0 0 0 0 0 0 0 36 0 0 1.127 37 0.48
3 3 B 0 0 0 0 0 0 0 0 0 78 0 0 0 0 3 0 19 0 0 0 37 0 0 0.604 20 0.67
4 4 B 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 90 0 2 41 0 0 0.375 12 0.89
5 5 B 2 0 0 22 5 0 0 7 49 0 0 10 0 0 0 0 0 5 0 0 41 0 0 1.487 49 0.24
6 6 B 0 0 0 0 0 0 0 5 0 40 0 0 0 0 55 0 0 0 0 0 42 0 0 0.841 28 0.43
7 7 B 5 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 5 74 0 7 43 0 0 0.912 30 0.55
8 8 B 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 93 5 0 0 0 43 0 0 0.297 9 0.88
9 9 B 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.000 0 1.00
10 10 B 2 0 0 0 0 0 0 0 0 0 0 0 98 0 0 0 0 0 0 0 43 0 0 0.110 3 0.95
11 11 B 2 0 0 0 0 0 0 93 5 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.297 9 0.89
12 12 B 0 0 0 0 0 0 0 0 2 0 0 0 0 91 7 0 0 0 0 0 43 0 0 0.362 12 0.80
13 13 B 0 0 0 0 0 0 2 0 0 0 0 0 0 86 5 0 0 5 2 0 43 0 0 0.590 19 0.70
14 14 B 0 16 0 0 81 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 43 0 0 0.551 18 0.88
15 15 B 88 2 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.418 13 0.89
16 16 B 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 43 1 0 0.000 0 1.00
17 17 B 0 0 0 0 0 0 0 0 95 0 0 5 0 0 0 0 0 0 0 0 42 0 0 0.191 6 0.93
18 18 B 5 95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.188 6 0.91
19 19 B 95 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.188 6 0.95
20 20 B 0 0 0 0 5 0 0 0 0 0 2 0 0 0 91 0 2 0 0 0 43 0 0 0.406 13 0.63
21 21 B 56 30 0 2 0 0 0 0 5 0 0 5 2 0 0 0 0 0 0 0 43 0 0 1.147 38 0.47
22 22 B 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 43 0 0 0.000 0 1.00
23 23 B 0 0 0 0 0 0 0 98 0 0 2 0 0 0 0 0 0 0 0 0 43 0 0 0.110 3 0.96
24 24 B 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 43 1 0 0.000 0 1.00
25 25 B 0 0 0 0 0 0 0 0 0 95 5 0 0 0 0 0 0 0 0 0 42 0 0 0.191 6 0.85
26 26 B 0 5 0 0 0 0 0 0 0 0 0 0 0 0 95 0 0 0 0 0 42 0 0 0.191 6 0.89
27 27 B 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.000 0 1.00
28 28 B 0 0 0 0 0 0 0 0 5 0 84 0 0 0 5 2 0 0 2 2 43 0 0 0.697 23 0.61
29 29 B 2 2 0 2 0 0 0 2 0 36 26 19 0 0 7 0 0 0 0 2 42 0 0 1.668 55 0.25
30 30 B 0 0 0 0 0 0 0 0 5 0 0 0 0 3 0 0 0 90 0 3 40 0 0 0.429 14 0.76
31 31 B 0 0 0 0 0 0 0 6 65 0 6 6 0 0 0 0 0 6 0 12 34 0 0 1.200 40 0.55
32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000 0 1.00
33 1 A 0 0 0 0 0 0 0 0 88 0 13 0 0 0 0 0 0 0 0 0 32 0 0 0.377 12 0.72
34 2 A 3 0 0 0 0 0 0 0 67 0 0 27 0 0 0 0 3 0 0 0 33 0 0 0.837 27 0.57
35 3 A 0 0 0 0 0 0 0 0 88 3 0 6 0 0 0 0 0 0 3 0 34 0 0 0.485 16 0.78
36 4 A 9 0 15 0 0 0 0 0 12 6 6 50 0 0 0 0 0 0 3 0 34 0 0 1.531 51 0.34
37 5 A 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 88 0 34 0 0 0.362 12 0.73
38 6 A 0 0 0 0 0 0 0 0 9 91 0 0 0 0 0 0 0 0 0 0 34 0 0 0.298 9 0.83
39 7 A 12 0 0 0 0 0 0 0 88 0 0 0 0 0 0 0 0 0 0 0 34 0 0 0.362 12 0.71
40 8 A 0 0 0 0 0 0 0 0 0 0 0 0 0 35 53 3 9 0 0 0 34 0 0 1.022 34 0.52
41 9 A 0 0 0 0 3 0 21 0 0 0 0 0 0 53 21 0 3 0 0 0 34 0 0 1.195 39 0.38
42 10 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 34 0 0 0.000 0 1.00
43 11 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 34 0 0 0.000 0 1.00
44 12 A 0 94 3 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 34 0 0 0.264 8 0.83
45 13 A 0 0 3 0 3 0 0 0 0 0 76 12 0 0 0 0 0 0 6 0 34 0 0 0.831 27 0.46
46 14 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 34 0 0 0.000 0 1.00
47 15 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 34 0 0 0.000 0 1.00
48 16 A 0 0 0 0 0 0 0 0 0 0 12 88 0 0 0 0 0 0 0 0 34 0 0 0.362 12 0.82
49 17 A 0 0 0 0 0 6 0 0 0 0 0 0 0 6 50 6 32 0 0 0 34 0 0 1.212 40 0.47
50 18 A 0 0 0 0 0 0 0 3 0 0 0 0 0 0 3 0 94 0 0 0 34 0 0 0.264 8 0.88
51 19 A 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 3 94 34 0 0 0.264 8 0.92
52 20 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34 0 0 0.000 0 1.00
53 21 A 0 97 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 34 0 0 0.133 4 0.87
54 22 A 0 0 0 0 0 0 0 9 12 0 3 74 0 3 0 0 0 0 0 0 34 0 0 0.900 30 0.50
55 23 A 0 91 3 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34 0 0 0.355 11 0.91
56 24 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 34 0 0 0.000 0 1.00
57 25 A 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 34 0 0 0.000 0 1.00
58 26 A 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0.000 0 1.00
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
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