Complet list of 2fft hssp file
Complete list of 2fft.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 2FFT
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-18
HEADER PLANT PROTEIN 20-DEC-05 2FFT
COMPND MOL_ID: 1; MOLECULE: THYLAKOID SOLUBLE PHOSPHOPROTEIN; CHAIN: A; ENGIN
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: SPINACIA OLERACEA; ORGANISM_COMMON: SP
AUTHOR J.SONG,I.CARLBERG,M.S.LEE,J.L.MARKLEY,CENTER FOR EUKARYOTIC STRUCTURAL
DBREF 2FFT A 2 84 GB 27529048 CAD45559 21 103
SEQLENGTH 84
NCHAIN 1 chain(s) in 2FFT data set
NALIGN 34
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : Q8GT36_SPIOL2FFT 0.99 1.00 1 84 20 103 84 0 0 103 Q8GT36 Thylakoid soluble phosphoprotein (Precursor) OS=Spinacia oleracea GN=tsp9 PE=1 SV=1
2 : B9SHY8_RICCO 0.64 0.81 1 83 19 94 83 1 7 94 B9SHY8 Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0611510 PE=4 SV=1
3 : B9HP64_POPTR 0.51 0.72 2 84 17 90 83 2 9 90 B9HP64 Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s04820g PE=4 SV=1
4 : I6Y9K3_LINUS 0.49 0.73 1 83 18 103 88 2 7 103 I6Y9K3 Thylakoid soluble phosphoprotein OS=Linum usitatissimum GN=TSP9 PE=4 SV=1
5 : V4RUC9_9ROSI 0.46 0.70 1 83 20 98 83 1 4 98 V4RUC9 Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029657mg PE=4 SV=1
6 : W1PIC5_AMBTC 0.42 0.60 1 83 18 89 83 1 11 89 W1PIC5 Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00029p00225070 PE=4 SV=1
7 : I3SG71_MEDTR 0.41 0.65 1 82 23 95 82 1 9 95 I3SG71 Uncharacterized protein OS=Medicago truncatula PE=4 SV=1
8 : K4AJJ7_SETIT 0.41 0.64 1 84 37 121 87 3 5 121 K4AJJ7 Uncharacterized protein OS=Setaria italica GN=Si039067m.g PE=4 SV=1
9 : M4CEI6_BRARP 0.41 0.63 2 83 23 101 82 1 3 101 M4CEI6 Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=BRA002617 PE=4 SV=1
10 : A9PGC5_POPTR 0.40 0.70 1 84 19 92 84 1 10 92 A9PGC5 Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s25670g PE=4 SV=1
11 : I1N020_SOYBN 0.40 0.64 1 83 19 92 83 1 9 92 I1N020 Uncharacterized protein OS=Glycine max PE=4 SV=1
12 : V4LRM1_THESL 0.40 0.65 1 83 23 102 83 1 3 102 V4LRM1 Uncharacterized protein OS=Thellungiella salsuginea GN=EUTSA_v10015099mg PE=4 SV=1
13 : V7BQ66_PHAVU 0.40 0.66 1 83 19 91 83 1 10 91 V7BQ66 Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G065100g PE=4 SV=1
14 : K4CA37_SOLLC 0.38 0.64 1 84 28 106 87 2 11 106 K4CA37 Uncharacterized protein OS=Solanum lycopersicum GN=Solyc06g076790.1 PE=4 SV=1
15 : Q94CB6_ARATH 0.38 0.61 1 82 20 100 85 3 7 100 Q94CB6 Putative uncharacterized protein At3g47070 OS=Arabidopsis thaliana GN=At3g47070 PE=2 SV=1
16 : Q9SD66_ARATH 0.38 0.61 1 82 20 100 85 3 7 100 Q9SD66 Putative uncharacterized protein At3g47070 OS=Arabidopsis thaliana GN=F13I12.120 PE=1 SV=1
17 : A5B3D6_VITVI 0.37 0.58 1 83 217 287 83 2 12 287 A5B3D6 Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_028924 PE=4 SV=1
18 : A9NY03_PICSI 0.37 0.67 1 83 17 99 84 2 2 99 A9NY03 Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1
19 : F6GUT9_VITVI 0.37 0.58 1 83 18 88 83 1 12 88 F6GUT9 Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g06170 PE=4 SV=1
20 : G7K6C4_MEDTR 0.37 0.63 2 83 24 106 83 1 1 106 G7K6C4 Putative uncharacterized protein OS=Medicago truncatula GN=MTR_5g069990 PE=1 SV=1
21 : M0U7B2_MUSAM 0.37 0.65 1 83 22 103 86 2 7 103 M0U7B2 Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1
22 : M4DSK1_BRARP 0.37 0.64 1 83 20 103 86 2 5 103 M4DSK1 Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=BRA019494 PE=4 SV=1
23 : M5WDM9_PRUPE 0.37 0.64 1 84 22 93 84 1 12 93 M5WDM9 Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013971mg PE=4 SV=1
24 : R0HPM0_9BRAS 0.37 0.62 1 83 20 106 87 2 4 106 R0HPM0 Uncharacterized protein OS=Capsella rubella GN=CARUB_v10019272mg PE=4 SV=1
25 : W9RP83_9ROSA 0.37 0.64 1 83 20 89 83 1 13 89 W9RP83 Uncharacterized protein OS=Morus notabilis GN=L484_022051 PE=4 SV=1
26 : B8LM75_PICSI 0.35 0.63 1 83 17 99 84 2 2 99 B8LM75 Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1
27 : K7LQS7_SOYBN 0.35 0.59 1 83 18 92 83 1 8 92 K7LQS7 Uncharacterized protein OS=Glycine max PE=4 SV=1
28 : M0ZYE5_SOLTU 0.34 0.60 1 83 25 100 86 2 13 100 M0ZYE5 Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400004165 PE=4 SV=1
29 : M4DNT1_BRARP 0.33 0.60 1 83 19 104 86 1 3 104 M4DNT1 Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=BRA018169 PE=4 SV=1
30 : V4L6A3_THESL 0.33 0.58 1 83 20 117 98 3 15 117 V4L6A3 Uncharacterized protein OS=Thellungiella salsuginea GN=EUTSA_v10010831mg PE=4 SV=1
31 : M1CZN7_SOLTU 0.32 0.60 1 84 28 104 87 3 13 104 M1CZN7 Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400030440 PE=4 SV=1
32 : D7LNA1_ARALL 0.31 0.55 1 82 20 100 85 2 7 100 D7LNA1 Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_905937 PE=4 SV=1
33 : J3LUC6_ORYBR 0.31 0.58 1 84 80 160 86 3 7 160 J3LUC6 Uncharacterized protein OS=Oryza brachyantha GN=OB03G46520 PE=4 SV=1
34 : A9NL89_PICSI 0.30 0.60 1 83 15 90 83 1 7 90 A9NL89 Putative uncharacterized protein OS=Picea sitchensis PE=1 SV=1
## ALIGNMENTS 1 - 34
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A S 0 0 185 32 50 AT TTTTA TTGTTSSATA ATAGTTATTTTGAP
2 2 A A - 0 0 100 35 51 AAAAAAKTGAATAATTTSTGEAAAASTSTAATTA
3 3 A A - 0 0 92 35 69 AAAAAAGRTAASASKKANATAKTKANATKKSKRA
4 4 A K + 0 0 214 35 73 KKTKKSTGTKKSKKGGEVETKGAGKVAKGGKGGA
5 5 A G - 0 0 65 35 64 GGAGEKTSNGGNGSGGKAKGGAAAGAKSTASAKK
6 6 A T + 0 0 120 35 63 TASSASSPTAASASSSSKSGASKSTKGFSSSSPA
7 7 A A + 0 0 95 35 35 AGGGGSAATGGTGGGGSGSGGGGGGGAGGGGGAT
8 8 A E + 0 0 187 35 50 EGGGGSPPTGGAGGGGGSGSSGGAGSGVGGGGPN
9 9 A T + 0 0 90 35 58 TSSSSGIATGSTSSQPGSGSSASASSGSAASAAA
10 10 A K + 0 0 164 35 51 KKKKKGKKKKKKKTKKSESKGKKKKESSKKTKDG
11 11 A Q + 0 0 153 35 33 QEEEEEEEEEEEEEEEGKGQEEEEEKKEEEEEEK
12 12 A E + 0 0 103 35 16 EEEEEEEEEEEEEEEEEKEEEEEEEKEEEEEEEK
13 13 A K + 0 0 201 35 0 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
14 14 A S S >> S- 0 0 76 35 45 SGGGSGGSSGGSGSNNGGGGGSGNGGGSNNSNSG
15 15 A F H >> S+ 0 0 151 35 61 FFLPLLFLILLIFLPPIFIFLPLPLFLIPPLPLL
16 16 A V H 3> S+ 0 0 64 35 36 VLLWLFLVILLILLIILLLWLLLLLLLLLLLIAI
17 17 A D H <4 S+ 0 0 74 35 2 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDE
18 18 A W H X S+ 0 0 96 35 23 LVIIIIIIVIIVIIVVILIIIVIVILIVVVIVIL
20 20 A L H >X S+ 0 0 95 35 41 LLLVLTLFLILLLLLLLGLVLLLLLGILLLLLFT
21 21 A G H 34 S+ 0 0 4 34 16 GGGGGAGSGGGGGGGGGEGGGGGGG.GGGGGGGD
22 22 A K H << S+ 0 0 113 35 87 KNSTGKGSSSGSGAFFGRGGGYGFGEGAYYAFAG
23 23 A I H << S+ 0 0 129 35 25 ILLLMLMILLLLLLMMLLLLLLLMLRLLLLLMIF
24 24 A T S < S- 0 0 90 35 74 TTQIQQQFTQQTQQTTQQQTQTATQLQQTTQTFQ
25 25 A K - 0 0 131 35 8 KKKKKKKKKKKKKKKKKRKKKKKKKQKKKKKKKK
26 26 A E + 0 0 95 35 46 EEEEQEEKQEEQEQQQEEEEEQEQDREEQQRQKP
27 27 A D - 0 0 97 34 5 DDDDDDDDDDDDDDDDD.DDDDDDNEDDDDDDDD
28 28 A Q - 0 0 131 35 0 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
29 29 A F S S+ 0 0 169 35 14 FFFFFFFLFFLFLLFFMLMFLFLFLLLLFFLFLF
30 30 A Y + 0 0 148 35 45 YYYYYYFVYYLYLLYYLLLYLYLYLLVLYYLYVF
31 31 A E + 0 0 185 35 0 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
32 32 A T S S- 0 0 87 35 0 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
33 33 A D - 0 0 95 35 11 DDDDDDDDDDDNDDNNDDDDDDDDDDDDDDDNDD
34 34 A P + 0 0 87 35 0 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
35 35 A I S S- 0 0 95 35 18 IIIIIIILLIILILLLIIIIIIIIIIIIIILILI
36 36 A L S S- 0 0 151 35 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLMLLLLLL
37 37 A R S S- 0 0 234 35 31 RKKNKKKNKKKKKKKKKRKKKKKKKRKKKKNKNQ
38 38 A G - 0 0 23 35 13 GKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
39 39 A G S S+ 0 0 43 35 32 GVVTVVVVVVVVVVVVVGVVVVVVVGVVVVVVVD
40 40 A D + 0 0 119 34 27 DE.EEEEDDEEDEEDDENEEGEEEENEEEEEEDQ
41 41 A V - 0 0 146 34 46 VE.EDEEGDGEEEDEEEGEEEKDEEGEGEEDEGQ
42 42 A K - 0 0 160 34 28 KK.KKKKAKKKKKKKKKEKKKEKKKEKKKKKKAK
43 43 A S - 0 0 114 34 64 SS.SSNSPENNENSEENGNNNQNENGNSGESEPD
44 44 A S - 0 0 112 34 51 SS.GPGAAGNGGGVGGGNGNGGGAGNGGGGVGAE
45 45 A G S S+ 0 0 80 34 53 GG.GPVGATGGGGSTTGGGSGTAAGGGTTSSTSN
46 46 A S + 0 0 109 33 66 S..GSGTATGTTTTTTSNSRGTTRGNTTRRTTGG
47 47 A T + 0 0 147 34 63 T.ETGKTSGTTGTTTTNANGSGNSGATTSSTGSR
48 48 A S - 0 0 101 34 69 S.ETRKSRGASGTSGGGRGTRGGSGRTSGGTSTP
49 49 A G - 0 0 56 34 73 G.KSGNNANSNNSSGGGPGTSRGGRPTFTGTRAN
50 50 A K - 0 0 189 34 74 K.NGTSGKGGTGNGRRRPRSTGRTKPTNTTGGSP
51 51 A K - 0 0 193 34 75 K.SRTVRPGRGGGRGGKSKRATKTNSTKGKRTRK
52 52 A G + 0 0 71 34 77 G.GgNTKrRKRRRKTTNgNgTFGgSgGKGsKVKK
53 53 A G S S+ 0 0 78 12 71 GGGg...g.........v.t...r.v..Rg....
54 54 A T - 0 0 127 13 53 TTTT...T.........A.S...G.A..GG..T.
55 55 A T S S+ 0 0 144 16 61 TTTT...T......VV.A.G.R.T.A..TT..V.
56 56 A S + 0 0 89 19 75 SSSS...SK..K..RR.G.K.G.V.G..VNN.S.
57 57 A G S S+ 0 0 56 23 61 GGGGG..GT..T..GGSK.GGG.R.K..RgSRS.
58 58 A K + 0 0 170 17 84 KRRRR...V..V.....K.TSG.G.K..Gg.G..
59 59 A K - 0 0 122 17 72 KKRKK...S..S.....G.TRK.G.G..GG.G..
60 60 A G S S+ 0 0 40 21 61 GNNGN..GG..G..GG.G.SKS.K.G..KK.K.K
61 61 A T S S+ 0 0 111 23 67 TSSTS..KG..G.NKK.S.GSA.S.SR.SN.N.G
62 62 A V S S+ 0 0 103 26 79 VVVTA.NKK.NK.SNN.A.GSA.S.AN.SS.SKT
63 63 A S S S+ 0 0 57 29 77 SSATS.TPNNKNKVSS.S.KTP.A.FKSAT.AKG
64 64 A I S S- 0 0 77 30 78 IIVVVIVASSNSNAAA.S.NSV.P.SNVPP.PPS
65 65 A P - 0 0 91 32 72 PPP.PPVSLVSVSVPP.SSSVPTT.SSSVVVTAQ
66 66 A S S S+ 0 0 89 34 77 SQQ.QSVSAAVAVPTTVSVVSVVPVSVIPPAPAQ
67 67 A K S S- 0 0 194 35 78 KKKSPPPSVVAVAPPPVEVVVAEVAEASVVVVGQ
68 68 A K - 0 0 170 35 79 KKKVQKPDPPVPVKVVVDVVPPIAVDVPAPPPAQ
69 69 A K S S+ 0 0 207 35 61 KKKPKKQDQQPQPKPPPKPPSKPPPKPPPPPPDQ
70 70 A N + 0 0 145 35 55 NNKQKEKGKKQKQNKKPKPQKKQKPKQQKKKKEK
71 71 A G + 0 0 66 34 49 GG.KKGKGKKKKKSKKKSKKKNKKKSKKKKKKEK
72 72 A N S S+ 0 0 176 34 65 NG.KGGKSNKKNKNSSKGKKKDKNKGKDNSDSGK
73 73 A G + 0 0 54 35 75 GFNKGFGGGSKGKGEEKGKKSGKEKGKYDDGEGS
74 74 A G - 0 0 53 35 16 GGGGFGGGGGGGGGGGGGGGGGGGGGGNGGGGGE
75 75 A V S S+ 0 0 129 35 21 VGGGGGGGGGGGGGGGGPGGGGGGGPGGGGGGGG
76 76 A F S S- 0 0 168 35 2 FFFFLFFFFFFFFFFFFFFFFLFFFFFFFFFFFF
77 77 A G S S+ 0 0 42 35 14 GGGGGGGnGGGGGaggGGGGggGgGGGgagggsG
78 78 A G S S+ 0 0 66 35 12 GGGGDGGgGGGGGgssGGGGggGgGGGsgggggG
79 79 A L S S+ 0 0 129 35 4 LLLLLLLLLLLLLLLLLLLFLLLFLLLLFFLLLL
80 80 A F S S+ 0 0 155 35 0 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
81 81 A A - 0 0 66 35 50 AAAAAAAAAAAAANKKAGANANVSAGAANNNKAA
82 82 A K + 0 0 190 35 0 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
83 83 A K 0 0 193 31 26 KKKNKK KKNNKNK KKKDKKKKNKNKKKK KK
84 84 A D 0 0 194 9 19 D D D D D D E G
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 9 25 3 9 53 0 0 0 0 0 0 0 0 32 0 0 1.235 41 0.50
2 2 A 0 0 0 0 0 0 0 6 51 0 9 29 0 0 0 3 0 3 0 0 35 0 0 1.277 42 0.49
3 3 A 0 0 0 0 0 0 0 3 46 0 9 11 0 0 6 20 0 0 6 0 35 0 0 1.567 52 0.30
4 4 A 6 0 0 0 0 0 0 26 9 0 6 11 0 0 0 37 0 6 0 0 35 0 0 1.666 55 0.27
5 5 A 0 0 0 0 0 0 0 34 23 0 11 6 0 0 0 17 0 3 6 0 35 0 0 1.683 56 0.36
6 6 A 0 0 0 0 3 0 0 6 20 6 46 11 0 0 0 9 0 0 0 0 35 0 0 1.567 52 0.37
7 7 A 0 0 0 0 0 0 0 66 17 0 9 9 0 0 0 0 0 0 0 0 35 0 0 0.999 33 0.64
8 8 A 3 0 0 0 0 0 0 57 6 9 14 3 0 0 0 0 0 6 3 0 35 0 0 1.440 48 0.49
9 9 A 0 0 3 0 0 0 0 14 23 3 43 11 0 0 0 0 3 0 0 0 35 0 0 1.531 51 0.42
10 10 A 0 0 0 0 0 0 0 9 0 0 11 6 0 0 0 66 0 6 0 3 35 0 0 1.163 38 0.49
11 11 A 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 11 9 74 0 0 35 0 0 0.843 28 0.66
12 12 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 91 0 0 35 0 0 0.293 9 0.83
13 13 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 35 0 0 0.000 0 1.00
14 14 A 0 0 0 0 0 0 0 51 0 0 31 0 0 0 0 0 0 0 17 0 35 0 0 1.008 33 0.55
15 15 A 0 40 14 0 23 0 0 0 0 23 0 0 0 0 0 0 0 0 0 0 35 0 0 1.319 44 0.38
16 16 A 9 63 17 0 3 6 0 0 3 0 0 0 0 0 0 0 0 0 0 0 35 0 0 1.171 39 0.63
17 17 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 97 35 0 0 0.130 4 0.98
18 18 A 0 0 0 0 40 60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.673 22 0.93
19 19 A 31 14 54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.973 32 0.76
20 20 A 6 71 6 0 6 0 0 6 0 0 0 6 0 0 0 0 0 0 0 0 35 1 0 1.058 35 0.59
21 21 A 0 0 0 0 0 0 0 88 3 0 3 0 0 0 0 0 0 3 0 3 34 0 0 0.525 17 0.84
22 22 A 0 0 0 0 11 0 9 34 11 0 14 3 0 0 3 9 0 3 3 0 35 0 0 1.968 65 0.12
23 23 A 0 66 11 17 3 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 35 0 0 1.029 34 0.75
24 24 A 0 3 3 0 6 0 0 0 3 0 0 37 0 0 0 0 49 0 0 0 35 0 0 1.187 39 0.25
25 25 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 94 3 0 0 0 35 0 0 0.259 8 0.91
26 26 A 0 0 0 0 0 0 0 0 0 3 0 0 0 0 6 6 31 51 0 3 35 1 0 1.236 41 0.54
27 27 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 94 34 0 0 0.264 8 0.95
28 28 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 35 0 0 0.000 0 1.00
29 29 A 0 37 0 6 57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.851 28 0.86
30 30 A 9 34 0 0 6 0 51 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 1.083 36 0.54
31 31 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 35 0 0 0.000 0 1.00
32 32 A 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 35 0 0 0.000 0 1.00
33 33 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 89 35 0 0 0.355 11 0.88
34 34 A 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 35 0 0 0.000 0 1.00
35 35 A 0 23 77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.538 17 0.82
36 36 A 0 97 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.130 4 0.99
37 37 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 74 3 0 11 0 35 0 0 0.818 27 0.68
38 38 A 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 94 0 0 0 0 35 0 0 0.219 7 0.87
39 39 A 83 0 0 0 0 0 0 11 0 0 0 3 0 0 0 0 0 0 0 3 35 1 0 0.607 20 0.68
40 40 A 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 3 65 6 24 34 0 0 0.996 33 0.73
41 41 A 6 0 0 0 0 0 0 18 0 0 0 0 0 0 0 3 3 56 0 15 34 0 0 1.287 42 0.54
42 42 A 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 85 0 9 0 0 34 0 0 0.517 17 0.72
43 43 A 0 0 0 0 0 0 0 9 0 6 26 0 0 0 0 0 3 21 32 3 34 0 0 1.631 54 0.36
44 44 A 6 0 0 0 0 0 0 56 12 3 9 0 0 0 0 0 0 3 12 0 34 0 0 1.417 47 0.49
45 45 A 3 0 0 0 0 0 0 47 9 3 15 21 0 0 0 0 0 0 3 0 34 1 0 1.487 49 0.46
46 46 A 0 0 0 0 0 0 0 21 3 0 15 42 0 0 12 0 0 0 6 0 33 0 0 1.510 50 0.34
47 47 A 0 0 0 0 0 0 0 21 6 0 18 38 0 0 3 3 0 3 9 0 34 0 0 1.691 56 0.36
48 48 A 0 0 0 0 0 0 0 32 3 3 24 18 0 0 15 3 0 3 0 0 34 0 0 1.708 57 0.30
49 49 A 0 0 0 0 3 0 0 29 6 6 15 12 0 0 9 3 0 0 18 0 34 0 0 1.955 65 0.26
50 50 A 0 0 0 0 0 0 0 26 0 9 9 21 0 0 15 12 0 0 9 0 34 0 0 1.854 61 0.25
51 51 A 3 0 0 0 0 0 0 21 3 3 9 15 0 0 21 24 0 0 3 0 34 0 0 1.902 63 0.24
52 52 A 3 0 0 0 3 0 0 32 0 0 6 12 0 0 15 21 0 0 9 0 34 23 7 1.812 60 0.23
53 53 A 17 0 0 0 0 0 0 58 0 0 0 8 0 0 17 0 0 0 0 0 12 0 0 1.119 37 0.28
54 54 A 0 0 0 0 0 0 0 23 15 0 8 54 0 0 0 0 0 0 0 0 13 0 0 1.157 38 0.46
55 55 A 19 0 0 0 0 0 0 6 13 0 0 56 0 0 6 0 0 0 0 0 16 0 0 1.244 41 0.39
56 56 A 11 0 0 0 0 0 0 16 0 0 37 0 0 0 11 16 0 0 11 0 19 0 0 1.662 55 0.25
57 57 A 0 0 0 0 0 0 0 57 0 0 13 9 0 0 13 9 0 0 0 0 23 6 1 1.279 42 0.39
58 58 A 12 0 0 0 0 0 0 29 0 0 6 6 0 0 24 24 0 0 0 0 17 0 0 1.626 54 0.15
59 59 A 0 0 0 0 0 0 0 35 0 0 12 6 0 0 12 35 0 0 0 0 17 0 0 1.405 46 0.28
60 60 A 0 0 0 0 0 0 0 48 0 0 10 0 0 0 0 29 0 0 14 0 21 0 0 1.213 40 0.38
61 61 A 0 0 0 0 0 0 0 17 4 0 35 13 0 0 4 13 0 0 13 0 23 0 0 1.741 58 0.32
62 62 A 15 0 0 0 0 0 0 4 15 0 23 8 0 0 0 15 0 0 19 0 26 0 0 1.842 61 0.21
63 63 A 3 0 0 0 3 0 0 3 14 7 28 14 0 0 0 17 0 0 10 0 29 0 0 1.972 65 0.23
64 64 A 20 0 13 0 0 0 0 0 13 17 23 0 0 0 0 0 0 0 13 0 30 1 0 1.766 58 0.21
65 65 A 25 3 0 0 0 0 0 0 3 28 28 9 0 0 0 0 3 0 0 0 32 0 0 1.607 53 0.27
66 66 A 29 0 3 0 0 0 0 0 15 15 21 6 0 0 0 0 12 0 0 0 34 0 0 1.771 59 0.22
67 67 A 34 0 0 0 0 0 0 3 14 17 9 0 0 0 0 11 3 9 0 0 35 0 0 1.820 60 0.21
68 68 A 29 0 3 0 0 0 0 0 9 29 0 0 0 0 0 17 6 0 0 9 35 0 0 1.704 56 0.21
69 69 A 0 0 0 0 0 0 0 0 0 49 3 0 0 0 0 29 14 0 0 6 35 0 0 1.252 41 0.38
70 70 A 0 0 0 0 0 0 0 3 0 9 0 0 0 0 0 51 20 6 11 0 35 1 0 1.387 46 0.44
71 71 A 0 0 0 0 0 0 0 15 0 0 9 0 0 0 0 71 0 3 3 0 34 0 0 0.949 31 0.51
72 72 A 0 0 0 0 0 0 0 18 0 0 15 0 0 0 0 38 0 0 21 9 34 0 0 1.495 49 0.35
73 73 A 0 0 0 0 6 0 3 37 0 0 9 0 0 0 0 26 0 11 3 6 35 0 0 1.706 56 0.25
74 74 A 0 0 0 0 3 0 0 91 0 0 0 0 0 0 0 0 0 3 3 0 35 0 0 0.387 12 0.83
75 75 A 6 0 0 0 0 0 0 89 0 6 0 0 0 0 0 0 0 0 0 0 35 0 0 0.435 14 0.78
76 76 A 0 6 0 0 94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.219 7 0.98
77 77 A 0 0 0 0 0 0 0 89 6 0 3 0 0 0 0 0 0 0 3 0 35 0 13 0.474 15 0.85
78 78 A 0 0 0 0 0 0 0 89 0 0 9 0 0 0 0 0 0 0 0 3 35 0 0 0.420 14 0.87
79 79 A 0 89 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.355 11 0.96
80 80 A 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.000 0 1.00
81 81 A 3 0 0 0 0 0 0 6 63 0 3 0 0 0 0 9 0 0 17 0 35 0 0 1.171 39 0.49
82 82 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 35 0 0 0.000 0 1.00
83 83 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 77 0 0 19 3 31 0 0 0.627 20 0.73
84 84 A 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 11 0 78 9 0 0 0.684 22 0.80
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
4 53 70 5 gTTSGRg
8 53 89 1 rGg
8 76 113 2 nLGg
14 70 97 3 aGFGg
15 74 93 3 gGLGs
16 74 93 3 gGLGs
18 52 68 1 gRv
20 52 75 1 gTt
21 74 95 3 gGLGg
22 76 95 3 gGLAg
24 53 72 1 gGr
24 78 98 3 gGLGg
26 52 68 1 gRv
28 68 92 3 gGFGs
29 78 96 3 aGLGg
30 53 72 5 sGGTKSg
30 58 82 7 gGRGTVRGg
30 78 109 3 gGLGg
31 68 95 3 gGFGg
32 74 93 3 gGLGg
33 73 152 2 sLGg
//