Complet list of 2da4 hssp file
Complete list of 2da4.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 2DA4
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-17
HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 13-DEC-05 2DA4
COMPND MOL_ID: 1; MOLECULE: HYPOTHETICAL PROTEIN DKFZP686K21156; CHAIN: A; FR
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: HOMO SAPIENS; ORGANISM_COMMON: HUMAN;
AUTHOR S.OHNISHI,T.KIGAWA,K.SAITO,S.KOSHIBA,M.INOUE,S.YOKOYAMA, RIKEN STRUCTU
DBREF 2DA4 A 8 74 GB 75517232 AAI01723 435 501
SEQLENGTH 80
NCHAIN 1 chain(s) in 2DA4 data set
NALIGN 68
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : F6Q6Z8_HORSE 0.95 0.97 8 80 439 511 73 0 0 694 F6Q6Z8 Uncharacterized protein OS=Equus caballus GN=HDX PE=3 SV=1
2 : F7D8D4_MACMU 0.95 0.97 8 80 435 507 73 0 0 689 F7D8D4 Uncharacterized protein OS=Macaca mulatta PE=3 SV=1
3 : F7EA18_CALJA 0.95 0.97 8 80 435 507 73 0 0 690 F7EA18 Uncharacterized protein OS=Callithrix jacchus GN=HDX PE=3 SV=1
4 : G1QQF6_NOMLE 0.95 0.97 8 80 435 507 73 0 0 689 G1QQF6 Uncharacterized protein OS=Nomascus leucogenys GN=HDX PE=3 SV=1
5 : G1SEB0_RABIT 0.95 0.97 8 80 438 510 73 0 0 693 G1SEB0 Uncharacterized protein OS=Oryctolagus cuniculus GN=HDX PE=3 SV=1
6 : G3QS18_GORGO 0.95 0.97 8 80 435 507 73 0 0 690 G3QS18 Uncharacterized protein OS=Gorilla gorilla gorilla GN=101130541 PE=3 SV=1
7 : G3UEF7_LOXAF 0.95 0.97 8 80 439 511 73 0 0 694 G3UEF7 Uncharacterized protein OS=Loxodonta africana GN=HDX PE=3 SV=1
8 : G7NSD5_MACMU 0.95 0.97 8 80 435 507 73 0 0 690 G7NSD5 Highly divergent homeobox OS=Macaca mulatta GN=EGK_20694 PE=3 SV=1
9 : G7Q357_MACFA 0.95 0.97 8 80 435 507 73 0 0 690 G7Q357 Highly divergent homeobox OS=Macaca fascicularis GN=EGM_18954 PE=3 SV=1
10 : H2PW54_PONAB 0.95 0.97 8 80 435 507 73 0 0 690 H2PW54 Uncharacterized protein OS=Pongo abelii GN=HDX PE=3 SV=1
11 : H2QYU9_PANTR 0.95 0.97 8 80 435 507 73 0 0 690 H2QYU9 Highly divergent homeobox OS=Pan troglodytes GN=HDX PE=2 SV=1
12 : HDX_HUMAN 2DA4 0.95 0.97 8 80 435 507 73 0 0 690 Q7Z353 Highly divergent homeobox OS=Homo sapiens GN=HDX PE=1 SV=1
13 : J9PB89_CANFA 0.95 0.97 8 80 438 510 73 0 0 586 J9PB89 Uncharacterized protein OS=Canis familiaris GN=HDX PE=3 SV=1
14 : M3W4P7_FELCA 0.95 0.97 8 80 438 510 73 0 0 692 M3W4P7 Uncharacterized protein OS=Felis catus GN=HDX PE=3 SV=1
15 : M3ZAF6_NOMLE 0.95 0.97 8 80 435 507 73 0 0 614 M3ZAF6 Uncharacterized protein OS=Nomascus leucogenys GN=HDX PE=3 SV=1
16 : H0XMX5_OTOGA 0.94 0.97 9 80 439 510 72 0 0 693 H0XMX5 Uncharacterized protein OS=Otolemur garnettii GN=HDX PE=3 SV=1
17 : E2RLF6_CANFA 0.93 0.96 8 80 438 511 74 1 1 693 E2RLF6 Uncharacterized protein OS=Canis familiaris GN=HDX PE=4 SV=1
18 : F6W4D6_MONDO 0.93 0.97 8 80 439 511 73 0 0 694 F6W4D6 Uncharacterized protein OS=Monodelphis domestica GN=HDX PE=3 SV=1
19 : G1MZR6_MELGA 0.93 0.97 8 80 441 513 73 0 0 696 G1MZR6 Uncharacterized protein OS=Meleagris gallopavo GN=HDX PE=3 SV=1
20 : G1PYY2_MYOLU 0.93 0.97 9 80 2 73 72 0 0 256 G1PYY2 Uncharacterized protein (Fragment) OS=Myotis lucifugus PE=3 SV=1
21 : G3WN97_SARHA 0.93 0.97 8 80 438 510 73 0 0 693 G3WN97 Uncharacterized protein OS=Sarcophilus harrisii GN=HDX PE=3 SV=1
22 : H0YWA3_TAEGU 0.93 0.97 8 80 440 512 73 0 0 695 H0YWA3 Uncharacterized protein OS=Taeniopygia guttata GN=HDX PE=3 SV=1
23 : HDX_CHICK 0.93 0.97 8 80 440 512 73 0 0 695 Q5ZKW8 Highly divergent homeobox OS=Gallus gallus GN=HDX PE=2 SV=1
24 : HDX_MOUSE 0.93 0.96 8 80 437 509 73 0 0 692 Q14B70 Highly divergent homeobox OS=Mus musculus GN=Hdx PE=2 SV=1
25 : K7F631_PELSI 0.93 0.97 8 80 442 514 73 0 0 697 K7F631 Uncharacterized protein OS=Pelodiscus sinensis GN=HDX PE=3 SV=1
26 : K7F632_PELSI 0.93 0.97 8 80 442 514 73 0 0 698 K7F632 Uncharacterized protein OS=Pelodiscus sinensis GN=HDX PE=3 SV=1
27 : M3Y4L0_MUSPF 0.93 0.97 8 80 439 511 73 0 0 693 M3Y4L0 Uncharacterized protein OS=Mustela putorius furo GN=HDX PE=3 SV=1
28 : M7BDR3_CHEMY 0.93 0.97 8 80 442 514 73 0 0 696 M7BDR3 Highly divergent homeobox (Fragment) OS=Chelonia mydas GN=UY3_06712 PE=3 SV=1
29 : R0KBH0_ANAPL 0.93 0.97 8 80 442 514 73 0 0 697 R0KBH0 Highly divergent homeobox (Fragment) OS=Anas platyrhynchos GN=Anapl_05803 PE=3 SV=1
30 : R7VMJ9_COLLI 0.93 0.97 8 80 443 515 73 0 0 698 R7VMJ9 Highly divergent homeobox OS=Columba livia GN=A306_16033 PE=3 SV=1
31 : U3IK34_ANAPL 0.93 0.97 8 80 442 514 73 0 0 698 U3IK34 Uncharacterized protein OS=Anas platyrhynchos GN=HDX PE=3 SV=1
32 : U6CYY6_NEOVI 0.93 0.97 8 80 25 97 73 0 0 279 U6CYY6 Highly divergent homeobox (Fragment) OS=Neovison vison GN=HDX PE=2 SV=1
33 : F6ZWI7_ORNAN 0.92 0.96 9 80 53 124 72 0 0 302 F6ZWI7 Uncharacterized protein OS=Ornithorhynchus anatinus GN=LOC100076138 PE=3 SV=2
34 : S7N7H6_MYOBR 0.92 0.97 8 80 63 135 73 0 0 317 S7N7H6 Highly divergent homeobox OS=Myotis brandtii GN=D623_10020373 PE=3 SV=1
35 : W5NUS8_SHEEP 0.92 0.97 8 80 440 512 73 0 0 695 W5NUS8 Uncharacterized protein OS=Ovis aries GN=HDX PE=3 SV=1
36 : B1WAR2_XENTR 0.90 0.96 9 80 376 447 72 0 0 627 B1WAR2 Hdx protein (Fragment) OS=Xenopus tropicalis GN=hdx PE=2 SV=1
37 : F6SRA3_XENTR 0.90 0.96 9 80 437 508 72 0 0 688 F6SRA3 Uncharacterized protein OS=Xenopus tropicalis GN=hdx PE=3 SV=1
38 : F7BCU7_XENTR 0.90 0.96 9 80 376 447 72 0 0 627 F7BCU7 Uncharacterized protein (Fragment) OS=Xenopus tropicalis GN=hdx PE=3 SV=1
39 : H0VR69_CAVPO 0.90 0.96 8 80 438 510 73 0 0 693 H0VR69 Uncharacterized protein OS=Cavia porcellus GN=HDX PE=3 SV=1
40 : D4A457_RAT 0.87 0.92 2 80 513 591 79 0 0 772 D4A457 Protein Hdx OS=Rattus norvegicus GN=RGD1563666 PE=3 SV=2
41 : U3JN65_FICAL 0.86 0.92 2 80 480 558 79 0 0 741 U3JN65 Uncharacterized protein OS=Ficedula albicollis GN=HDX PE=3 SV=1
42 : H9GKQ0_ANOCA 0.85 0.92 2 80 471 549 79 0 0 732 H9GKQ0 Uncharacterized protein OS=Anolis carolinensis GN=HDX PE=3 SV=2
43 : H2ZWG8_LATCH 0.81 0.91 2 80 430 508 79 0 0 679 H2ZWG8 Uncharacterized protein OS=Latimeria chalumnae PE=3 SV=1
44 : Q4RTB3_TETNG 0.78 0.86 9 80 1 72 72 0 0 273 Q4RTB3 Chromosome 1 SCAF14998, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00029332001 PE=4 SV=1
45 : W5ND10_LEPOC 0.77 0.92 2 80 428 506 79 0 0 701 W5ND10 Uncharacterized protein OS=Lepisosteus oculatus GN=HDX PE=3 SV=1
46 : M4ABS6_XIPMA 0.76 0.86 9 80 452 523 72 0 0 691 M4ABS6 Uncharacterized protein OS=Xiphophorus maculatus GN=HDX PE=3 SV=1
47 : V8NUG4_OPHHA 0.75 0.82 2 69 434 499 68 1 2 571 V8NUG4 Highly divergent homeobox (Fragment) OS=Ophiophagus hannah GN=HDX PE=3 SV=1
48 : E7F5L7_DANRE 0.72 0.87 2 80 382 460 79 0 0 649 E7F5L7 Uncharacterized protein OS=Danio rerio PE=3 SV=1
49 : H3DEA8_TETNG 0.72 0.84 2 80 386 464 79 0 0 614 H3DEA8 Uncharacterized protein OS=Tetraodon nigroviridis PE=3 SV=1
50 : H3DEA9_TETNG 0.72 0.84 2 80 381 459 79 0 0 603 H3DEA9 Uncharacterized protein OS=Tetraodon nigroviridis PE=3 SV=1
51 : W5UER6_ICTPU 0.72 0.86 2 80 440 518 79 0 0 711 W5UER6 Highly divergent homeobox OS=Ictalurus punctatus GN=HDX PE=2 SV=1
52 : G3Q3Q8_GASAC 0.71 0.85 2 80 390 468 79 0 0 659 G3Q3Q8 Uncharacterized protein OS=Gasterosteus aculeatus GN=HDX PE=3 SV=1
53 : I3KMC5_ORENI 0.71 0.84 2 80 410 488 79 0 0 651 I3KMC5 Uncharacterized protein OS=Oreochromis niloticus GN=HDX PE=3 SV=1
54 : I3KMC6_ORENI 0.71 0.84 2 80 396 474 79 0 0 666 I3KMC6 Uncharacterized protein OS=Oreochromis niloticus GN=HDX PE=3 SV=1
55 : I3KMC7_ORENI 0.71 0.84 2 80 400 478 79 0 0 660 I3KMC7 Uncharacterized protein OS=Oreochromis niloticus GN=HDX PE=3 SV=1
56 : V9KJY5_CALMI 0.71 0.87 2 80 389 467 79 0 0 648 V9KJY5 Highly divergent homeobox-like protein OS=Callorhynchus milii PE=2 SV=1
57 : V9KLX4_CALMI 0.71 0.87 2 80 438 516 79 0 0 649 V9KLX4 Highly divergent homeobox-like protein (Fragment) OS=Callorhynchus milii PE=2 SV=1
58 : H2LWY5_ORYLA 0.70 0.84 2 80 417 495 79 0 0 663 H2LWY5 Uncharacterized protein OS=Oryzias latipes PE=3 SV=1
59 : H2T6T2_TAKRU 0.68 0.82 2 80 393 471 79 0 0 664 H2T6T2 Uncharacterized protein OS=Takifugu rubripes PE=3 SV=1
60 : H2T6T3_TAKRU 0.68 0.82 2 80 388 466 79 0 0 654 H2T6T3 Uncharacterized protein OS=Takifugu rubripes PE=3 SV=1
61 : H2T6T4_TAKRU 0.68 0.82 2 80 394 472 79 0 0 625 H2T6T4 Uncharacterized protein OS=Takifugu rubripes PE=3 SV=1
62 : S4RHR1_PETMA 0.68 0.83 9 80 445 516 72 0 0 520 S4RHR1 Uncharacterized protein OS=Petromyzon marinus GN=HDX PE=3 SV=1
63 : W5L1X9_ASTMX 0.55 0.69 2 79 430 497 78 1 10 693 W5L1X9 Uncharacterized protein OS=Astyanax mexicanus GN=HDX PE=3 SV=1
64 : C3XTG7_BRAFL 0.49 0.69 9 69 16 76 61 0 0 737 C3XTG7 Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_122173 PE=3 SV=1
65 : W4Y8V3_STRPU 0.36 0.61 5 73 273 341 69 0 0 776 W4Y8V3 Uncharacterized protein OS=Strongylocentrotus purpuratus GN=Sp-Hypp_671 PE=3 SV=1
66 : I3MPR4_SPETR 0.34 0.61 9 79 1 71 71 0 0 438 I3MPR4 Uncharacterized protein OS=Spermophilus tridecemlineatus GN=HDX PE=4 SV=1
67 : D2I2X1_AILME 0.33 0.62 9 80 1 72 72 0 0 422 D2I2X1 Uncharacterized protein (Fragment) OS=Ailuropoda melanoleuca GN=PANDA_019790 PE=4 SV=1
68 : H9EZX1_MACMU 0.33 0.61 9 80 1 72 72 0 0 100 H9EZX1 Highly divergent homeobox isoform 1 (Fragment) OS=Macaca mulatta GN=HDX PE=2 SV=1
## ALIGNMENTS 1 - 68
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A G 0 0 144 1 0
2 2 A S - 0 0 119 22 52 GGGG S GSNNSSSSSGGSTTT S
3 3 A S - 0 0 73 22 73 CCCC N CNSSNNNNNTTNNNN N
4 4 A G - 0 0 41 22 7 SSSS S SSSSSSSSSSSSSSS S
5 5 A S + 0 0 107 23 10 RRRR R RRRRRRRRRRRRRRR R W
6 6 A S + 0 0 101 23 28 KKKK K KKKKKKKKKKKKKKK K S
7 7 A G - 0 0 79 23 12 RRRR R RRRRRRRRRRRRRRR R R
8 8 A A - 0 0 104 56 62 AAAAAAAAAAAAAAA AAA AAAAAAAAAAAA TA AAAAT T ATTTTTTTTTTTTTT T M
9 9 A L + 0 0 177 69 10 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLMLFIMMM
10 10 A Q - 0 0 129 69 29 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPNNN
11 11 A D S S+ 0 0 169 69 52 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDEMLLL
12 12 A R S S- 0 0 209 69 0 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
13 13 A T + 0 0 109 69 41 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTQHSSS
14 14 A Q - 0 0 165 69 49 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQATVVV
15 15 A F - 0 0 66 69 0 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
16 16 A S > - 0 0 68 69 30 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTTTT
17 17 A D H > S+ 0 0 147 69 55 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDEEDDDDPDNLVVV
18 18 A R H > S+ 0 0 206 69 83 RRRRRRRRRRRRRRRRRRRRRRRRRRQRRRRQRRQHHHQRRRQGRGRRGGDAGGGNNGGGGRGKEEEE
19 19 A D H > S+ 0 0 57 69 24 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDQQQQQ
20 20 A L H X>S+ 0 0 63 69 42 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLKQQQ
21 21 A A H X5S+ 0 0 50 69 93 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAIAVAYIIYIIIIAAVIIIVYERRRR
22 22 A T H X5S+ 0 0 38 69 75 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTITTMMMMTTTTQTQTTQQTQQQQVVQQQQMATTIII
23 23 A L H >X5S+ 0 0 0 69 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
24 24 A K H 3X5S+ 0 0 107 69 29 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKMQQQ
25 25 A K H ><S+ 0 0 63 69 0 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYFYYYYYFYYYYYYYYYYYYYYYYYYYYYYY
27 27 A W H ><5S+ 0 0 36 69 10 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWYFYYY
28 28 A D T <<5S+ 0 0 121 69 19 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDGGDDDDDDEEEEE
29 29 A N T < 5S- 0 0 130 69 43 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNKNRNRKNRRNRRRRNNRRRRNNNQNNN
30 30 A G T X 5 + 0 0 39 69 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
31 31 A M T 3 < + 0 0 3 69 0 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMM
32 32 A T T 3 + 0 0 26 69 15 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNVTTT
33 33 A S < - 0 0 52 69 29 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSGNNN
34 34 A L + 0 0 53 69 48 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLQQQQQ
35 35 A G S >> S- 0 0 41 69 32 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGRSSSS
36 36 A S H 3> S+ 0 0 86 69 50 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSLLKKK
37 37 A V H 34 S+ 0 0 103 69 51 VVVVVVVVVVVVVVVVVVVIVVVVVVVVVVVVVIVVVVVVVVVVIVVLVVVVVVVIIVVVVVVAMNNN
38 38 A C H X> S+ 0 0 12 69 12 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNYCCC
39 39 A R H 3X S+ 0 0 119 69 47 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRKRRRRRRRRRRRRRRRRQFFF
40 40 A E H 3< S+ 0 0 132 69 17 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDDEEEEEEEEQQQ
41 41 A K H X> S+ 0 0 116 69 35 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKLLL
42 42 A I H 3X S+ 0 0 1 69 4 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIMIIII
43 43 A E H 3X S+ 0 0 121 69 80 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEENTAEANNANSSSEEANNNESLQLLL
44 44 A A H <> S+ 0 0 32 69 38 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAVAAAAAAAAAAAAAAAAAASAAQQQQ
45 45 A V H X S+ 0 0 0 69 69 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVAVAVAAAAAAAAVVAAAAVACCCCC
46 46 A A H X>S+ 0 0 7 69 5 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAASSAAAAAAAAAAA
47 47 A T H <5S+ 0 0 80 69 79 TTTTTTTTTTTTTTTTTAATAAAIAATAAAATATTSSSTTASSTANAITTTNNNNMMNNNNNTTQQQQ
48 48 A E H <5S+ 0 0 125 69 24 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEQEQEQQQKQQQQEEQQQQEEEEEEE
49 49 A L H <5S- 0 0 37 69 48 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLTATTT
50 50 A N T <5 + 0 0 90 69 51 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSGSNNNGGSNNNNNNNGGGNNGAKKK
51 51 A V < - 0 0 41 69 22 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVIVLLLLL
52 52 A D >> - 0 0 77 69 5 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDEEDDD
53 53 A C H >> S+ 0 0 70 69 83 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTCTCTTTSTTTTCCTTTTFSFFFFF
54 54 A E H 3> S+ 0 0 133 69 31 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDDSSS
55 55 A I H <> S+ 0 0 79 69 17 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIITVVVV
56 56 A V H XX S+ 0 0 0 69 2 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVIVVIVVIVVVVVVVVVVVVVVVVV
57 57 A R H 3X S+ 0 0 97 69 19 RRRRRRRRRRRRRRRRrRRRRRRRRRRRRRRRRRRRRRRRRRRRKKRKRRKKKKKKKKRRRKKRRRRR
58 58 A T H 3X S+ 0 0 66 67 20 TTTTTTTTTTTTTTTTtTTTTTTTTTTTTTTTTTTTTTTTTTTTTT.TTTTTTTTTTTTTTN.NNTTT
59 59 A W H X S+ 0 0 97 68 3 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNNNNNNNNNNNNNNN.NNNNN
63 63 A R H 3X S+ 0 0 51 68 39 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRLRRRRRRRRRRRRRRQ.YQKKK
64 64 A R H 3X S+ 0 0 102 68 4 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRLRRRRRRRRRRRRRRR.RRRRR
65 65 A R H X>S+ 0 0 71 68 56 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYTYYYYYYYYYYYFFFC.LRMMM
68 68 A R H ><5S+ 0 0 178 69 33 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRSRRRRRRRRRRRRRRRSRRSSS
69 69 A L H 3<5S+ 0 0 135 69 49 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLQQLLLLQMLLSSS
70 70 A M H <<5S- 0 0 151 67 44 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMM MMMMMMMMMMMMMMQL EKKK
71 71 A G T <<5 + 0 0 62 67 30 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG GGGGGGGGGGGGGGGG ENNN
72 72 A I < - 0 0 76 67 42 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII IIIIIIIIIIIIIIML VSSS
73 73 A E + 0 0 185 67 17 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEQEEEEEEEEEEE EEEDEEEEDDDEEEEM QEEE
74 74 A V + 0 0 46 66 61 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVIII IIIIIIIILLIIIIPS SSS
75 75 A S - 0 0 103 66 34 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP PPPPPPPPPPPPPPPR GGG
76 76 A G S S+ 0 0 52 66 38 PPPPPPPPPPPPPPPPPPPPPPPPPPTPPPPPPPPPPPPPPPPPPP PPPPPPPPPPPPPPQV GAT
77 77 A P - 0 0 120 66 35 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP PPPPPPPPTTPPPPPS TAA
78 78 A S - 0 0 133 66 56 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRKKK KKKKRKKKRRKKKKRR TTT
79 79 A S 0 0 122 66 24 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG GGGGGGGGSSGGGGGA GAT
80 80 A G 0 0 126 64 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG GGGGGGGGGGGGGGG GG
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
2 2 A 0 0 0 0 0 0 0 32 0 0 45 14 0 0 0 0 0 0 9 0 22 0 0 1.212 40 0.48
3 3 A 0 0 0 0 0 0 0 0 0 0 14 9 23 0 0 0 0 0 55 0 22 0 0 1.157 38 0.26
4 4 A 0 0 0 0 0 0 0 5 0 0 95 0 0 0 0 0 0 0 0 0 22 0 0 0.185 6 0.93
5 5 A 0 0 0 0 0 4 0 0 0 0 4 0 0 0 91 0 0 0 0 0 23 0 0 0.356 11 0.89
6 6 A 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 91 0 0 0 0 23 0 0 0.295 9 0.72
7 7 A 0 0 0 0 0 0 0 4 0 0 0 0 0 0 96 0 0 0 0 0 23 0 0 0.179 5 0.88
8 8 A 0 0 0 2 0 0 0 0 66 0 0 32 0 0 0 0 0 0 0 0 56 0 0 0.711 23 0.37
9 9 A 0 91 1 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 69 0 0 0.371 12 0.89
10 10 A 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 94 0 4 0 69 0 0 0.254 8 0.71
11 11 A 0 4 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 93 69 0 0 0.329 10 0.47
12 12 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 69 0 0 0.000 0 1.00
13 13 A 0 0 0 0 0 0 0 0 0 0 4 93 0 1 0 0 1 0 0 0 69 0 0 0.329 10 0.58
14 14 A 4 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 93 0 0 0 69 0 0 0.329 10 0.50
15 15 A 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 69 0 0 0.000 0 1.00
16 16 A 0 0 0 0 0 0 0 0 0 0 94 6 0 0 0 0 0 0 0 0 69 0 0 0.221 7 0.69
17 17 A 4 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 3 1 88 69 0 0 0.532 17 0.45
18 18 A 0 0 0 0 0 0 0 17 1 0 0 0 0 4 58 1 7 6 3 1 69 0 0 1.399 46 0.16
19 19 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 93 69 0 0 0.260 8 0.76
20 20 A 0 94 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 69 0 0 0.254 8 0.58
21 21 A 4 0 14 0 0 0 4 0 70 0 0 0 0 0 6 0 0 1 0 0 69 0 0 1.031 34 0.07
22 22 A 3 0 6 7 0 0 0 0 1 0 0 65 0 0 0 0 17 0 0 0 69 0 0 1.102 36 0.25
23 23 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 69 0 0 0.000 0 1.00
24 24 A 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 94 4 0 0 0 69 0 0 0.254 8 0.70
25 25 A 0 0 0 0 0 0 0 0 0 0 0 0 0 9 20 71 0 0 0 0 69 0 0 0.779 26 0.58
26 26 A 0 0 0 0 3 0 97 0 0 0 0 0 0 0 0 0 0 0 0 0 69 0 0 0.131 4 1.00
27 27 A 0 0 0 0 1 93 6 0 0 0 0 0 0 0 0 0 0 0 0 0 69 0 0 0.296 9 0.89
28 28 A 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 7 0 90 69 0 0 0.389 12 0.81
29 29 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 3 1 0 78 0 69 0 0 0.660 22 0.56
30 30 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 69 0 0 0.000 0 1.00
31 31 A 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 69 0 0 0.000 0 1.00
32 32 A 1 0 0 0 0 0 0 0 0 0 0 97 0 0 0 0 0 0 1 0 69 0 0 0.151 5 0.85
33 33 A 0 0 0 0 0 0 0 1 0 0 94 0 0 0 0 0 0 0 4 0 69 0 0 0.254 8 0.71
34 34 A 0 93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 69 0 0 0.260 8 0.52
35 35 A 0 0 0 0 0 0 0 93 0 0 6 0 0 0 1 0 0 0 0 0 69 0 0 0.296 9 0.68
36 36 A 0 3 0 0 0 0 0 0 0 0 91 1 0 0 0 4 0 0 0 0 69 0 0 0.383 12 0.50
37 37 A 84 1 7 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 4 0 69 0 0 0.657 21 0.49
38 38 A 0 0 0 0 0 0 1 0 0 0 0 0 97 0 0 0 0 0 1 0 69 0 0 0.151 5 0.87
39 39 A 0 0 0 0 4 0 0 0 0 0 0 0 0 0 93 1 1 0 0 0 69 0 0 0.329 10 0.53
40 40 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 93 0 3 69 0 0 0.309 10 0.82
41 41 A 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 96 0 0 0 0 69 0 0 0.179 5 0.65
42 42 A 0 0 99 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 69 0 0 0.076 2 0.95
43 43 A 0 6 0 0 0 0 0 0 6 0 6 1 0 0 0 0 1 70 10 0 69 0 0 1.103 36 0.20
44 44 A 1 0 0 0 0 0 0 0 91 0 1 0 0 0 0 0 6 0 0 0 69 0 0 0.371 12 0.62
45 45 A 71 0 0 0 0 0 0 0 22 0 0 0 7 0 0 0 0 0 0 0 69 0 0 0.765 25 0.30
46 46 A 0 0 0 0 0 0 0 0 97 0 3 0 0 0 0 0 0 0 0 0 69 0 0 0.131 4 0.94
47 47 A 0 0 3 3 0 0 0 0 22 0 7 45 0 0 0 0 6 0 14 0 69 0 0 1.532 51 0.21
48 48 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 19 80 0 0 69 0 0 0.557 18 0.75
49 49 A 0 93 0 0 0 0 0 0 1 0 0 6 0 0 0 0 0 0 0 0 69 0 0 0.296 9 0.51
50 50 A 0 0 0 0 0 0 0 10 1 0 4 0 0 0 0 4 0 0 80 0 69 0 0 0.747 24 0.49
51 51 A 91 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 69 0 0 0.335 11 0.78
52 52 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 97 69 0 0 0.131 4 0.94
53 53 A 0 0 0 0 9 0 0 0 0 0 3 19 70 0 0 0 0 0 0 0 69 0 0 0.882 29 0.17
54 54 A 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 93 0 3 69 0 0 0.309 10 0.69
55 55 A 6 0 93 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 69 0 0 0.296 9 0.83
56 56 A 96 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 69 0 0 0.179 5 0.97
57 57 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 81 19 0 0 0 0 69 2 1 0.484 16 0.81
58 58 A 0 0 0 0 0 0 0 0 0 0 0 96 0 0 0 0 0 0 4 0 67 0 0 0.183 6 0.80
59 59 A 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 67 0 0 0.000 0 1.00
60 60 A 6 0 94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 68 0 0 0.224 7 0.90
61 61 A 0 0 0 0 0 0 0 81 0 0 19 0 0 0 0 0 0 0 0 0 68 0 0 0.488 16 0.75
62 62 A 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 99 0 68 0 0 0.077 2 0.97
63 63 A 0 1 0 0 0 0 1 0 0 0 0 0 0 0 90 4 3 0 0 0 68 0 0 0.463 15 0.60
64 64 A 0 1 0 0 0 0 0 0 0 0 0 0 0 0 99 0 0 0 0 0 68 0 0 0.077 2 0.95
65 65 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 68 0 0 0.000 0 1.00
66 66 A 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 97 0 0 0 0 68 0 0 0.153 5 0.94
67 67 A 0 1 0 4 4 0 85 0 0 0 0 1 1 0 1 0 0 0 0 0 68 0 0 0.659 22 0.43
68 68 A 0 0 0 0 0 0 0 0 0 0 7 0 0 0 93 0 0 0 0 0 69 0 0 0.260 8 0.67
69 69 A 0 90 0 1 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 69 0 0 0.430 14 0.51
70 70 A 0 1 0 91 0 0 0 0 0 0 0 0 0 0 0 4 1 1 0 0 67 0 0 0.413 13 0.55
71 71 A 0 0 0 0 0 0 0 94 0 0 0 0 0 0 0 0 0 1 4 0 67 0 0 0.260 8 0.70
72 72 A 1 1 91 1 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 67 0 0 0.413 13 0.58
73 73 A 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 3 90 0 6 67 0 0 0.435 14 0.83
74 74 A 67 3 23 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 66 0 0 0.946 31 0.38
75 75 A 0 0 0 0 0 0 0 5 0 92 2 0 0 0 2 0 0 0 0 0 66 0 0 0.340 11 0.65
76 76 A 2 0 0 0 0 0 0 3 2 89 0 3 0 0 0 0 2 0 0 0 66 0 0 0.503 16 0.61
77 77 A 0 0 0 0 0 0 0 0 3 91 2 5 0 0 0 0 0 0 0 0 66 0 0 0.397 13 0.65
78 78 A 0 0 0 0 0 0 0 0 0 0 2 5 0 0 73 21 0 0 0 0 66 0 0 0.764 25 0.44
79 79 A 0 0 0 0 0 0 0 91 3 0 5 2 0 0 0 0 0 0 0 0 66 0 0 0.397 13 0.76
80 80 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 64 0 0 0.000 0 1.00
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
17 51 488 1 rKt
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