Complet list of 2d9t hssp file
Complete list of 2d9t.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 2D9T
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-18
HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 13-DEC-05 2D9T
COMPND MOL_ID: 1; MOLECULE: TUDOR DOMAIN-CONTAINING PROTEIN 3; CHAIN: A; FRAG
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: MUS MUSCULUS; ORGANISM_COMMON: HOUSE M
AUTHOR H.LI,T.TOMIZAWA,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA,RIKEN STRUCTURAL
DBREF 2D9T A 8 67 UNP Q91W18 TDRD3_MOUSE 553 612
SEQLENGTH 78
NCHAIN 1 chain(s) in 2D9T data set
NALIGN 117
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : F7EYT2_CALJA 0.95 0.98 8 70 65 127 63 0 0 135 F7EYT2 Uncharacterized protein (Fragment) OS=Callithrix jacchus GN=TDRD3 PE=4 SV=1
2 : G9KSU9_MUSPF 0.92 0.98 8 67 185 244 60 0 0 251 G9KSU9 Tudor domain containing 3 (Fragment) OS=Mustela putorius furo PE=2 SV=1
3 : F7FJN3_MACMU 0.91 0.94 8 72 504 568 65 0 0 601 F7FJN3 Uncharacterized protein OS=Macaca mulatta GN=TDRD3 PE=4 SV=1
4 : F7HF34_MACMU 0.91 0.94 8 72 505 569 65 0 0 602 F7HF34 Uncharacterized protein OS=Macaca mulatta GN=TDRD3 PE=4 SV=1
5 : L9J8Z3_TUPCH 0.91 0.96 8 75 427 494 68 0 0 503 L9J8Z3 Tudor domain-containing protein 3 OS=Tupaia chinensis GN=TREES_T100007952 PE=4 SV=1
6 : L5KEB3_PTEAL 0.90 0.94 10 77 557 624 68 0 0 627 L5KEB3 Tudor domain-containing protein 3 OS=Pteropus alecto GN=PAL_GLEAN10015234 PE=4 SV=1
7 : G2HJ92_PANTR 0.88 0.92 8 72 436 500 65 0 0 533 G2HJ92 Tudor domain-containing protein 3 OS=Pan troglodytes PE=2 SV=1
8 : G3SR03_LOXAF 0.86 0.92 8 72 408 472 65 0 0 505 G3SR03 Uncharacterized protein (Fragment) OS=Loxodonta africana GN=TDRD3 PE=4 SV=1
9 : H0WT25_OTOGA 0.86 0.91 7 72 646 711 66 0 0 744 H0WT25 Uncharacterized protein OS=Otolemur garnettii GN=TDRD3 PE=4 SV=1
10 : I3LC04_PIG 0.86 0.91 8 72 275 339 65 0 0 372 I3LC04 Uncharacterized protein OS=Sus scrofa GN=LOC100621705 PE=4 SV=1
11 : S9XRZ9_9CETA 0.83 0.86 10 68 482 547 66 1 7 550 S9XRZ9 Tudor domain-containing protein 3 OS=Camelus ferus GN=CB1_002002001 PE=4 SV=1
12 : G3WF21_SARHA 0.80 0.94 8 73 636 701 66 0 0 734 G3WF21 Uncharacterized protein (Fragment) OS=Sarcophilus harrisii GN=TDRD3 PE=4 SV=1
13 : G5BZ38_HETGA 0.80 0.89 9 72 253 316 64 0 0 349 G5BZ38 Tudor domain-containing protein 3 OS=Heterocephalus glaber GN=GW7_05386 PE=4 SV=1
14 : E1BXW9_CHICK 0.77 0.94 8 73 643 708 66 0 0 741 E1BXW9 Tudor domain-containing protein 3 OS=Gallus gallus GN=TDRD3 PE=4 SV=2
15 : F6S5D8_ORNAN 0.77 0.91 3 72 266 335 70 0 0 368 F6S5D8 Uncharacterized protein OS=Ornithorhynchus anatinus GN=LOC100078575 PE=4 SV=2
16 : K7G596_PELSI 0.77 0.91 8 73 553 618 66 0 0 651 K7G596 Uncharacterized protein OS=Pelodiscus sinensis GN=TDRD3 PE=4 SV=1
17 : TDRD3_CHICK 0.77 0.94 8 73 643 708 66 0 0 741 Q5ZMS6 Tudor domain-containing protein 3 OS=Gallus gallus GN=TDRD3 PE=2 SV=1
18 : G1NQ11_MELGA 0.76 0.94 8 73 639 704 66 0 0 737 G1NQ11 Uncharacterized protein (Fragment) OS=Meleagris gallopavo GN=TDRD3 PE=4 SV=2
19 : H0ZQF8_TAEGU 0.76 0.92 8 73 643 708 66 0 0 741 H0ZQF8 Uncharacterized protein OS=Taeniopygia guttata GN=TDRD3 PE=4 SV=1
20 : U3JZR3_FICAL 0.76 0.92 8 73 646 711 66 0 0 744 U3JZR3 Uncharacterized protein OS=Ficedula albicollis GN=TDRD3 PE=4 SV=1
21 : R0LK18_ANAPL 0.74 0.91 8 73 629 694 66 0 0 727 R0LK18 Tudor domain-containing protein 3 (Fragment) OS=Anas platyrhynchos GN=Anapl_17539 PE=4 SV=1
22 : U3J3W5_ANAPL 0.74 0.91 8 73 579 644 66 0 0 677 U3J3W5 Uncharacterized protein (Fragment) OS=Anas platyrhynchos GN=TDRD3 PE=4 SV=1
23 : G1KDC8_ANOCA 0.73 0.88 1 73 630 702 73 0 0 735 G1KDC8 Uncharacterized protein OS=Anolis carolinensis GN=TDRD3 PE=4 SV=2
24 : H2V4B6_TAKRU 0.61 0.81 8 74 620 686 67 0 0 719 H2V4B6 Uncharacterized protein OS=Takifugu rubripes GN=LOC101074947 PE=4 SV=1
25 : H2LI37_ORYLA 0.60 0.78 6 72 669 735 67 0 0 768 H2LI37 Uncharacterized protein OS=Oryzias latipes GN=LOC101155265 PE=4 SV=1
26 : W4YTL7_STRPU 0.44 0.73 2 67 574 639 66 0 0 704 W4YTL7 Uncharacterized protein OS=Strongylocentrotus purpuratus GN=Sp-Tdrd3L PE=4 SV=1
27 : C3XX59_BRAFL 0.43 0.72 2 73 622 693 72 0 0 816 C3XX59 Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_73299 PE=4 SV=1
28 : B4GUJ0_DROPE 0.42 0.65 1 62 81 140 62 1 2 187 B4GUJ0 GL24569 OS=Drosophila persimilis GN=Dper\GL24569 PE=4 SV=1
29 : H2YNK5_CIOSA 0.42 0.68 2 63 3 64 62 0 0 107 H2YNK5 Uncharacterized protein OS=Ciona savignyi GN=Csa.3026 PE=4 SV=1
30 : T1HAC5_RHOPR 0.42 0.60 10 76 462 526 67 1 2 586 T1HAC5 Uncharacterized protein OS=Rhodnius prolixus PE=4 SV=1
31 : W4Z0P9_STRPU 0.42 0.71 2 77 376 451 76 0 0 554 W4Z0P9 Uncharacterized protein OS=Strongylocentrotus purpuratus GN=Sp-Tdrd3L_1 PE=4 SV=1
32 : F4WL44_ACREC 0.39 0.60 1 75 545 617 75 1 2 695 F4WL44 Tudor domain-containing protein 3 OS=Acromyrmex echinatior GN=G5I_06468 PE=4 SV=1
33 : M4AE86_XIPMA 0.39 0.58 8 73 71 136 66 0 0 238 M4AE86 Uncharacterized protein OS=Xiphophorus maculatus PE=4 SV=1
34 : W4WHE6_ATTCE 0.39 0.60 1 75 543 615 75 1 2 693 W4WHE6 Uncharacterized protein OS=Atta cephalotes PE=4 SV=1
35 : W5JA27_ANODA 0.39 0.55 10 78 1009 1075 69 1 2 1276 W5JA27 Uncharacterized protein OS=Anopheles darlingi GN=AND_007036 PE=4 SV=1
36 : X1Y4W0_ANODA 0.39 0.55 10 78 325 391 69 1 2 596 X1Y4W0 Uncharacterized protein OS=Anopheles darlingi PE=4 SV=1
37 : L5KJD0_PTEAL 0.38 0.59 2 65 84 147 64 0 0 282 L5KJD0 Survival motor neuron protein OS=Pteropus alecto GN=PAL_GLEAN10024870 PE=4 SV=1
38 : G1TD01_RABIT 0.37 0.59 3 65 85 147 63 0 0 284 G1TD01 Uncharacterized protein (Fragment) OS=Oryctolagus cuniculus GN=LOC100354989 PE=4 SV=1
39 : H0XQW7_OTOGA 0.37 0.60 1 65 90 154 65 0 0 288 H0XQW7 Uncharacterized protein OS=Otolemur garnettii PE=4 SV=1
40 : B5AHF5_PIG 0.36 0.61 2 65 84 147 64 0 0 294 B5AHF5 Survival motor neuron 1 OS=Sus scrofa GN=SMN1 PE=2 SV=1
41 : C1BLV6_OSMMO 0.36 0.57 10 78 72 140 69 0 0 237 C1BLV6 Survival of motor neuron-related-splicing factor 30 OS=Osmerus mordax GN=SPF30 PE=2 SV=1
42 : F1SK26_PIG 0.36 0.61 2 65 84 147 64 0 0 293 F1SK26 Uncharacterized protein OS=Sus scrofa GN=SMN1 PE=2 SV=2
43 : H0VL69_CAVPO 0.36 0.62 2 65 97 160 64 0 0 306 H0VL69 Uncharacterized protein (Fragment) OS=Cavia porcellus GN=LOC101788625 PE=4 SV=1
44 : I3IVB0_ORENI 0.36 0.61 10 78 73 141 69 0 0 238 I3IVB0 Uncharacterized protein OS=Oreochromis niloticus GN=LOC100697211 PE=4 SV=1
45 : R0LHG1_ANAPL 0.36 0.60 1 73 24 96 73 0 0 198 R0LHG1 Survival of motor neuron-related-splicing factor 30 (Fragment) OS=Anas platyrhynchos GN=SMNDC1 PE=4 SV=1
46 : C3KIW7_ANOFI 0.35 0.59 10 78 73 141 69 0 0 238 C3KIW7 Survival of motor neuron-related-splicing factor 30 OS=Anoplopoma fimbria GN=SPF30 PE=2 SV=1
47 : F7EJU6_ORNAN 0.35 0.57 2 64 77 139 63 0 0 278 F7EJU6 Uncharacterized protein OS=Ornithorhynchus anatinus GN=LOC100081724 PE=4 SV=2
48 : G1T2Y6_RABIT 0.35 0.54 2 64 62 123 63 1 1 219 G1T2Y6 Uncharacterized protein OS=Oryctolagus cuniculus PE=4 SV=1
49 : G3P4L7_GASAC 0.35 0.58 10 78 73 141 69 0 0 238 G3P4L7 Uncharacterized protein OS=Gasterosteus aculeatus PE=4 SV=1
50 : G3WR37_SARHA 0.35 0.58 2 73 26 97 72 0 0 199 G3WR37 Uncharacterized protein OS=Sarcophilus harrisii GN=SMNDC1 PE=4 SV=1
51 : H2LN34_ORYLA 0.35 0.56 8 78 71 141 71 0 0 238 H2LN34 Uncharacterized protein OS=Oryzias latipes GN=LOC101170118 PE=4 SV=1
52 : H2SVC8_TAKRU 0.35 0.61 10 78 73 141 69 0 0 238 H2SVC8 Uncharacterized protein OS=Takifugu rubripes GN=LOC101078596 PE=4 SV=1
53 : H3D730_TETNG 0.35 0.57 10 78 73 141 69 0 0 238 H3D730 Uncharacterized protein OS=Tetraodon nigroviridis PE=4 SV=1
54 : K9K265_HORSE 0.35 0.57 2 73 25 96 72 0 0 198 K9K265 Survival of motor neuron-related-splicing facto 30-like protein (Fragment) OS=Equus caballus PE=2 SV=1
55 : B7PET2_IXOSC 0.34 0.57 4 64 1 59 61 1 2 181 B7PET2 Survival motor neuron protein, putative (Fragment) OS=Ixodes scapularis GN=IscW_ISCW004969 PE=4 SV=1
56 : G1KJN6_ANOCA 0.34 0.59 2 74 80 152 73 0 0 279 G1KJN6 Uncharacterized protein OS=Anolis carolinensis GN=LOC100553231 PE=4 SV=1
57 : G9KQ88_MUSPF 0.34 0.59 2 65 66 129 64 0 0 274 G9KQ88 Survival motor neuron (Fragment) OS=Mustela putorius furo PE=2 SV=1
58 : M3YSQ0_MUSPF 0.34 0.59 2 65 81 144 64 0 0 282 M3YSQ0 Uncharacterized protein OS=Mustela putorius furo GN=Smn1 PE=4 SV=1
59 : U6DGU6_NEOVI 0.34 0.59 2 65 151 214 64 0 0 286 U6DGU6 Uncharacterized protein (Fragment) OS=Neovison vison GN=E7EQZ4 PE=2 SV=1
60 : A6QNM6_BOVIN 0.33 0.60 2 76 93 167 75 0 0 301 A6QNM6 SMN protein (Fragment) OS=Bos taurus GN=SMN PE=2 SV=1
61 : E1BQK7_CHICK 0.33 0.59 1 78 70 147 78 0 0 244 E1BQK7 Uncharacterized protein (Fragment) OS=Gallus gallus GN=SMNDC1 PE=4 SV=2
62 : F4R9H5_MELLP 0.33 0.52 1 67 92 160 69 1 2 259 F4R9H5 Putative uncharacterized protein OS=Melampsora larici-populina (strain 98AG31 / pathotype 3-4-7) GN=MELLADRAFT_70914 PE=4 SV=1
63 : G1KEV9_ANOCA 0.33 0.59 1 78 64 141 78 0 0 238 G1KEV9 Uncharacterized protein OS=Anolis carolinensis GN=SMNDC1 PE=4 SV=1
64 : G1NE77_MELGA 0.33 0.59 1 78 63 140 78 0 0 237 G1NE77 Uncharacterized protein (Fragment) OS=Meleagris gallopavo GN=SMNDC1 PE=4 SV=2
65 : H0ZK11_TAEGU 0.33 0.59 1 78 64 141 78 0 0 238 H0ZK11 Uncharacterized protein OS=Taeniopygia guttata GN=SMNDC1 PE=4 SV=1
66 : L7MAL1_9ACAR 0.33 0.48 3 68 173 236 66 1 2 497 L7MAL1 Putative transcriptional coactivator (Fragment) OS=Rhipicephalus pulchellus PE=2 SV=1
67 : L8IX36_9CETA 0.33 0.60 2 76 93 167 75 0 0 301 L8IX36 Survival motor neuron protein (Fragment) OS=Bos mutus GN=M91_09426 PE=4 SV=1
68 : S4RJW4_PETMA 0.33 0.62 10 78 86 154 69 0 0 287 S4RJW4 Uncharacterized protein (Fragment) OS=Petromyzon marinus PE=4 SV=1
69 : U3JHZ7_FICAL 0.33 0.59 1 78 64 141 78 0 0 238 U3JHZ7 Uncharacterized protein OS=Ficedula albicollis GN=SMNDC1 PE=4 SV=1
70 : U3KCW5_FICAL 0.33 0.58 2 73 74 145 72 0 0 269 U3KCW5 Uncharacterized protein (Fragment) OS=Ficedula albicollis PE=4 SV=1
71 : C9VZF4_PIG 0.32 0.57 2 78 65 141 77 0 0 238 C9VZF4 Survival motor neuron domain-containing protein 1 OS=Sus scrofa GN=SMNDC1 PE=2 SV=1
72 : D2I6J0_AILME 0.32 0.56 2 78 65 141 77 0 0 238 D2I6J0 Uncharacterized protein (Fragment) OS=Ailuropoda melanoleuca GN=LOC100464124 PE=4 SV=1
73 : E2QYH2_CANFA 0.32 0.56 2 78 120 196 77 0 0 292 E2QYH2 Uncharacterized protein (Fragment) OS=Canis familiaris GN=SMNDC1 PE=4 SV=2
74 : F1MS68_BOVIN 0.32 0.56 2 78 65 141 77 0 0 238 F1MS68 Survival of motor neuron-related-splicing factor 30 OS=Bos taurus GN=SMNDC1 PE=4 SV=1
75 : F1S5M7_PIG 0.32 0.57 2 78 65 141 77 0 0 238 F1S5M7 Uncharacterized protein OS=Sus scrofa GN=SMNDC1 PE=4 SV=1
76 : F6WCU5_XENTR 0.32 0.62 3 73 66 136 71 0 0 142 F6WCU5 Survival of motor neuron-related-splicing factor 30 OS=Xenopus tropicalis GN=smndc1 PE=4 SV=1
77 : F6ZET6_MONDO 0.32 0.57 2 78 65 141 77 0 0 238 F6ZET6 Uncharacterized protein OS=Monodelphis domestica GN=SMNDC1 PE=4 SV=1
78 : F7CVM3_MACMU 0.32 0.56 2 78 65 141 77 0 0 238 F7CVM3 Survival of motor neuron-related-splicing factor 30 OS=Macaca mulatta GN=SMNDC1 PE=2 SV=1
79 : F7F0X9_ORNAN 0.32 0.59 1 78 64 141 78 0 0 238 F7F0X9 Uncharacterized protein OS=Ornithorhynchus anatinus GN=SMNDC1 PE=4 SV=1
80 : F7HMY9_CALJA 0.32 0.56 2 78 65 141 77 0 0 238 F7HMY9 Survival of motor neuron-related-splicing factor 30 OS=Callithrix jacchus GN=SMNDC1 PE=2 SV=1
81 : G1PTM1_MYOLU 0.32 0.58 2 78 65 141 77 0 0 238 G1PTM1 Uncharacterized protein OS=Myotis lucifugus GN=SMNDC1 PE=4 SV=1
82 : G1RZV3_NOMLE 0.32 0.56 2 78 65 141 77 0 0 238 G1RZV3 Uncharacterized protein OS=Nomascus leucogenys GN=SMNDC1 PE=4 SV=1
83 : G1SUK0_RABIT 0.32 0.56 2 78 65 141 77 0 0 238 G1SUK0 Uncharacterized protein OS=Oryctolagus cuniculus GN=LOC100353047 PE=4 SV=1
84 : G3ICI5_CRIGR 0.32 0.57 2 78 65 141 77 0 0 238 G3ICI5 Survival of motor neuron-related-splicing factor 30 OS=Cricetulus griseus GN=I79_021383 PE=4 SV=1
85 : G3R3J9_GORGO 0.32 0.56 2 78 65 141 77 0 0 238 G3R3J9 Uncharacterized protein OS=Gorilla gorilla gorilla GN=101131875 PE=4 SV=1
86 : G3TD30_LOXAF 0.32 0.56 2 78 65 141 77 0 0 238 G3TD30 Uncharacterized protein OS=Loxodonta africana GN=SMNDC1 PE=4 SV=1
87 : G3WR38_SARHA 0.32 0.57 2 78 65 141 77 0 0 238 G3WR38 Uncharacterized protein OS=Sarcophilus harrisii GN=SMNDC1 PE=4 SV=1
88 : G5BKB9_HETGA 0.32 0.57 2 78 65 141 77 0 0 238 G5BKB9 Survival of motor neuron-related-splicing factor 30 OS=Heterocephalus glaber GN=GW7_14626 PE=4 SV=1
89 : G7N142_MACMU 0.32 0.56 2 78 65 141 77 0 0 238 G7N142 Putative uncharacterized protein OS=Macaca mulatta GN=EGK_20058 PE=4 SV=1
90 : G9KQ89_MUSPF 0.32 0.56 2 78 118 194 77 0 0 290 G9KQ89 Survival motor neuron domain containing 1 (Fragment) OS=Mustela putorius furo PE=2 SV=1
91 : H0V7J9_CAVPO 0.32 0.57 2 78 65 141 77 0 0 223 H0V7J9 Uncharacterized protein OS=Cavia porcellus GN=SMNDC1 PE=4 SV=1
92 : H0WGQ2_OTOGA 0.32 0.56 2 78 65 141 77 0 0 238 H0WGQ2 Uncharacterized protein OS=Otolemur garnettii GN=SMNDC1 PE=4 SV=1
93 : H2Q2K2_PANTR 0.32 0.56 2 78 65 141 77 0 0 238 H2Q2K2 Survival motor neuron domain containing 1 OS=Pan troglodytes GN=SMNDC1 PE=2 SV=1
94 : I3M792_SPETR 0.32 0.57 2 78 65 141 77 0 0 238 I3M792 Uncharacterized protein OS=Spermophilus tridecemlineatus GN=SMNDC1 PE=4 SV=1
95 : J9NSV5_CANFA 0.32 0.56 2 78 65 141 77 0 0 238 J9NSV5 Uncharacterized protein OS=Canis familiaris GN=SMNDC1 PE=4 SV=1
96 : K7G033_PELSI 0.32 0.59 1 78 64 141 78 0 0 238 K7G033 Uncharacterized protein OS=Pelodiscus sinensis GN=SMNDC1 PE=4 SV=1
97 : K9IHQ0_DESRO 0.32 0.58 2 78 65 141 77 0 0 238 K9IHQ0 Putative survival of motor neuron-related-splicing factor 30-like protein OS=Desmodus rotundus PE=2 SV=1
98 : L5K3C1_PTEAL 0.32 0.56 2 78 65 141 77 0 0 238 L5K3C1 Survival of motor neuron-related-splicing factor 30 OS=Pteropus alecto GN=PAL_GLEAN10014197 PE=4 SV=1
99 : L8ILV7_9CETA 0.32 0.56 2 78 65 141 77 0 0 238 L8ILV7 Survival of motor neuron-related-splicing factor 30 OS=Bos mutus GN=M91_12172 PE=4 SV=1
100 : L8YC94_TUPCH 0.32 0.56 2 78 65 141 77 0 0 238 L8YC94 Survival of motor neuron-related-splicing factor 30 OS=Tupaia chinensis GN=TREES_T100002078 PE=4 SV=1
101 : M3XF47_FELCA 0.32 0.56 2 78 65 141 77 0 0 238 M3XF47 Uncharacterized protein OS=Felis catus GN=SMNDC1 PE=4 SV=1
102 : M3XSL8_MUSPF 0.32 0.56 2 78 65 141 77 0 0 238 M3XSL8 Uncharacterized protein OS=Mustela putorius furo GN=SMNDC1 PE=4 SV=1
103 : M7BRD6_CHEMY 0.32 0.59 1 78 64 141 78 0 0 238 M7BRD6 Survival of motor neuron-related-splicing factor 30 OS=Chelonia mydas GN=UY3_02970 PE=4 SV=1
104 : Q3TGV3_MOUSE 0.32 0.56 2 78 65 141 77 0 0 238 Q3TGV3 Putative uncharacterized protein OS=Mus musculus GN=Smndc1 PE=2 SV=1
105 : Q98SU9_CHICK 0.32 0.57 2 73 72 143 72 0 0 264 Q98SU9 Survival motor neuron protein OS=Gallus gallus GN=SMN PE=2 SV=1
106 : S7N7G9_MYOBR 0.32 0.58 2 78 126 202 77 0 0 299 S7N7G9 Survival of motor neuron-related-splicing factor 30 OS=Myotis brandtii GN=D623_10027964 PE=4 SV=1
107 : S9WGM1_9CETA 0.32 0.56 2 78 109 185 77 0 0 243 S9WGM1 Survival of motor neuron-related-splicing factor 30 isoform 1 OS=Camelus ferus GN=CB1_001212007 PE=4 SV=1
108 : SPF30_BOVIN 0.32 0.56 2 78 65 141 77 0 0 238 Q3T045 Survival of motor neuron-related-splicing factor 30 OS=Bos taurus GN=SMNDC1 PE=2 SV=1
109 : SPF30_HUMAN 4A4F 0.32 0.56 2 78 65 141 77 0 0 238 O75940 Survival of motor neuron-related-splicing factor 30 OS=Homo sapiens GN=SMNDC1 PE=1 SV=1
110 : SPF30_MOUSE 0.32 0.55 2 78 65 141 77 0 0 238 Q8BGT7 Survival of motor neuron-related-splicing factor 30 OS=Mus musculus GN=Smndc1 PE=2 SV=1
111 : SPF30_PONAB 0.32 0.56 2 78 65 141 77 0 0 238 Q5R591 Survival of motor neuron-related-splicing factor 30 OS=Pongo abelii GN=SMNDC1 PE=2 SV=1
112 : SPF30_RAT 0.32 0.55 2 78 65 141 77 0 0 238 Q4QQU6 Survival of motor neuron-related-splicing factor 30 OS=Rattus norvegicus GN=Smndc1 PE=2 SV=1
113 : V9L3N6_CALMI 0.32 0.60 1 78 64 141 78 0 0 238 V9L3N6 Survival of motor neuron-related-splicing factor 30-like protein OS=Callorhynchus milii PE=2 SV=1
114 : W5PID0_SHEEP 0.32 0.56 2 78 65 141 77 0 0 238 W5PID0 Uncharacterized protein OS=Ovis aries GN=SMNDC1 PE=4 SV=1
115 : W5LM53_ASTMX 0.31 0.55 1 77 64 140 77 0 0 237 W5LM53 Uncharacterized protein OS=Astyanax mexicanus PE=4 SV=1
116 : W5MZX4_LEPOC 0.31 0.61 2 75 75 148 74 0 0 279 W5MZX4 Uncharacterized protein OS=Lepisosteus oculatus PE=4 SV=1
117 : W5N3J6_LEPOC 0.31 0.56 1 77 64 140 77 0 0 237 W5N3J6 Uncharacterized protein OS=Lepisosteus oculatus PE=4 SV=1
## ALIGNMENTS 1 - 70
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A G 0 0 133 19 44 S G N N S S SSSSS S
2 2 A S - 0 0 125 78 66 N AGMA SP P N NN NN A NA A A SNNNNAAAAA N AS
3 3 A S S S+ 0 0 139 82 71 P S QGLP QN N TTVT TT S NS S S NAAATSSSSSPT SN
4 4 A G + 0 0 80 83 55 A G SDPP SI I TTTT TT A TT A TAGTTTTAAAAAST AT
5 5 A S - 0 0 112 83 91 E E IGGT IT T TTEA AA L AQ Q QSATTTSLTPLLLS LA
6 6 A S + 0 0 123 84 46 C Y PPGDT PS S SASS SP P PP P PSPPPPPPSPPPPP PP
7 7 A G - 0 0 72 85 85 T G G EMQGP MT T LLLL LS S LI T TVQLLLSSNSSSPS SL
8 8 A K - 0 0 146 105 78 KKKKK KKKK R KTKKKKKRRKHHLRWT LWKW KKKK KK H TH HH HQKKKKKHVHHHAK HK
9 9 A V - 0 0 104 106 86 MLMMV MMML MITISTTSSSSSSGPKMP PVSV QQAQ QQ S QL ST SGQQQQQSLTSSMQ SQ
10 10 A W - 0 0 29 118 2 WWWWWWWWWWWWWWWWWWWWWWWWWFWWWWFWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWLWWWRWWWW
11 11 A K > - 0 0 118 118 22 KKKKKKKKKKKKKRKRRRRRRRQKKKRQTKKQKQKKKKKKKKKKKKRKKKKKKKKRKKKKKNKKKKKRKK
12 12 A P T 3 S+ 0 0 90 118 58 PPPPPPPPPPPPPPPPPPPPPPPPPVRKAVVVVVIIVVVVVVVVVVVVVVVATVQTVVVVVPVVVVVPVV
13 13 A G T 3 S+ 0 0 51 118 4 GGGGGGGGGGGGGGGGGGGGGGGGGENGGGDGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
14 14 A D < - 0 0 74 118 5 DDDDDDDDDDDDDDDDDDDDDDDDDDDDMDDDEDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDTDDDD
15 15 A E E +A 30 0A 88 118 73 EEEEEEEEEEEEEEEEEEEEEEEQQHHLMKHKRKHHKKRRRRRRRSTKSKRKKKYAKKKNRTRRRANLRS
16 16 A C E -AB 29 61A 0 118 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
17 17 A F E -AB 28 60A 65 118 66 FFFFFFFFFFFFFFFFFFFFFFFLLLLMMMLMLMMMSCSSMSSLMLCMLMMLLMISSSSCMMMMMCCQMS
18 18 A A E -AB 27 59A 0 118 5 AAAAAAAAAAAAAAAAAAAAAAAAASAAAASAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
19 19 A L E -A 26 0A 45 118 55 LLLLLLLLLLLLLLLLLLLLLLLLLKRKKKKKTKKKIIIIVIVMIVIIVVLVVIVVIIIIIKTIILIAIV
20 20 A Y > - 0 0 44 118 18 YYYYYYYYYYYYHYYYYYYYYYYYYYYYYYYYWYYYWWWWWWWWWWWWWWWWWWYWWWWWWYWWWYWWWW
21 21 A W T 4 S+ 0 0 147 118 55 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWSWWWSSSSSSSSSNSSKSGTSSSSSSSSSASSSSSSSS
22 22 A E T 4 S+ 0 0 134 118 13 EEEEEEEEEEEEEEEEEEEEEEEEEEEDEEEEQEEEEEEEQEEQEQEEQENNNESEEEEEEGEEEEEEEE
23 23 A D T 4 S- 0 0 61 118 0 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
24 24 A N < + 0 0 108 118 41 NNNNNNNNNNnNNNNNNNNNNNNSGGGGNNHNGNGGGGGGGGGGGGGGGGGGGGHGGGGGGGGGGGGGGG
25 25 A K - 0 0 116 118 81 KKKKKKKKKKkKKKKKKKKKKKKKKKKRQMKRQRGGCCCCQCCQQQNQQQQQQQLNCCCCQKQQQDCVQN
26 26 A F E +A 19 0A 99 118 78 FFFFFFFFFFFFFFFFFFFFFFFFFFFYYYFYVYYYVVIIVIIICVVCVCVLMCPVVVVICYCCCWIVCL
27 27 A Y E -A 18 0A 63 118 1 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYEYYYYYYYYYYYYYYYYYYYYYY
28 28 A R E +A 17 0A 94 118 78 RRRRRRRRRRRRRRRRRRRRRRRHHKPEQNKNENTTPPPPEPPEEEPAEEEEEEEQPPPPEPEEERPDEL
29 29 A A E -AC 16 45A 4 117 1 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA.AAAAAAAAAAAAAAAAAGAAAA
30 30 A E E -AC 15 44A 59 118 43 EEEEEEEEEEEEEEEEEEEEEEERRQMEKEQEEEEETTTTETTEEETEEEEEEEKTTTTTEKEEEITTET
31 31 A V E + C 0 43A 0 118 9 VVVVVVVVVVVIVVIIVVIIIIIIIIVIIVIVIVIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
32 32 A E E - 0 0A 75 118 49 EEEEEEEEEEEEEEEEEEEEEEEDDTTTMTTTETTTAAAAEAAEEEAEEEEEEEKNAAAAETEEERAKEA
33 33 A A E - C 0 42A 35 118 68 AAAAAAAAAAAAAAAAAAAAAAAAAGDGDGAGEGNNSSSSESSEEEAEEEEEEEYSSSSSETEEEESSES
34 34 A L E - C 0 41A 74 118 32 LLLLLLLLLLLLLLLLLLLLLLLLVIVVIIIVLVTTVVVIIIVIIITIIIIVVILIIIIIIIIIILIVII
35 35 A H - 0 0 86 117 53 HHHHHHHHHHHHHHHHHHHHHHHHHHA.HSHSDSSSDDDDDDDDDDDDDDDDDDKNDDDDDgDDDHDDDN
36 36 A S S S+ 0 0 117 111 96 SSSSSSSSSSSSSSSSSSSSSSSPPPP.P.P.R...FFFFGFLRERLERERRREGWFFFFEsEEE.FAEQ
37 37 A S S S- 0 0 93 112 71 SSSSSSSSSSSSSSSSSSSSSSSSSSNTH.S.E...KKKKEKKDEEKEEEEEEEKKKKKKEDEEE.KSEK
38 38 A G S S+ 0 0 48 118 73 GGGGGGGGGGGGSGGGGGGGGGGGGGGEQKGENEKKRRRRNRRNNNKNNNNNNNHKRRRRNTNNNPRANR
39 39 A M S S+ 0 0 127 118 81 MMMMMMMMMMMMMMMTMMTTTTTSSKRKTKKRGRNNEEEESEEGGGGGGGGKNGCGEEEEGRGGGGEGGG
40 40 A T E - D 0 55A 27 118 5 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTITTTTTTTTTTTTTITTTGTTTT
41 41 A A E -CD 34 54A 3 118 43 AAAAAAAAAAAAAAAAAAAAAAAAACACACCCACFFCCCCACCAAACAAAAAAAVCCCCCAYAAAACCAC
42 42 A V E -CD 33 53A 52 118 65 VVVVVVVVVVVVVVVVVVVVVVVVVMVVVVMVAVVVVVVIAIVAAAVAAAAAAAHVVVVVATAAATVVAV
43 43 A V E -CD 31 52A 0 117 16 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVIVIIVVI.VVVVVVVIVVVVMVV
44 44 A K E -CD 30 51A 76 117 81 KKKKKKKKKKKKKKKKKKKKKKKVVKLFHRKQTQHHVVVVTVVTTTVTTTNTTT.VVVVVTVTTTFVVTT
45 45 A F E >>> -CD 29 50A 1 118 2 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFYYYYFYYFFFYFFFFFFFYYYYYYFFFFFFYFFY
46 46 A T T 345S+ 0 0 87 118 78 IITTTIIIIIVSISCCSSSSCCCSSVTMILVKTKLLTTTTATTTAATAAAISSAITTTTTAKSAAVTTAT
47 47 A D T 345S- 0 0 77 118 37 DDDDDDDDDDDDDDDDDDDDDDDDDEEGEHEGEGEEGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGG
48 48 A Y T <45S- 0 0 179 118 1 YYYYYYYYYYYYCYYYYYYYYYYYYYYYYYYFYFYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
49 49 A G T <5 + 0 0 29 118 6 GGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGEGEGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGG
50 50 A N E < -D 45 0A 54 118 2 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNNNNNNNN
51 51 A Y E -D 44 0A 130 118 100 YYYYYYYYYYYYYYYYYYYYYYYCCYYHHFFYAYYYRRRRARRAAARAAAAAAAERRRRRATAAAVREAQ
52 52 A E E -D 43 0A 49 118 1 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEE
53 53 A E E +D 42 0A 143 118 80 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEVEEEEEEEVEEVVVEVVVVLVVREEEEEVLVVVSEEVE
54 54 A V E -D 41 0A 11 118 77 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVIVVVQQQQIQQITIQTITVIITVQQQQQTVTTTVQLTQ
55 55 A L E > -D 40 0A 66 118 95 LLLLLLLLLLLLLLLLLLLLLLLLLLELALLLPLLLNNNNPNNPPPNPPPPPPPLSNNNNPTPPPANKPN
56 56 A L G > S+ 0 0 40 118 24 LLLLLLLLLLLLLLLLLLLLLLLLLIMNLQIQLQKKLLLLLLLLLLLLLLLLLLVLMMMLLALLLDLLLL
57 57 A S G 3 S+ 0 0 99 118 96 SSSSSTSSSSSSSSSSSSSSSSSHETFGTDTVQVTTSSSSQSSQFQSLQLQQQLASSSSSFSLFFESAFS
58 58 A N G < S+ 0 0 61 118 32 NNNNNNNNNNNNSNNNNNNNNNNNNDNDHDDDNDDDDDDDNDDNNNDNNNNNNNDDDDDDNENNNGDDND
59 59 A I E < -B 18 0A 10 118 40 IVIIIIIIIIIIIIIIIMIIIIIIIIIILCICLCCCLLLLLLLLLLLPLLILLLLLLLLLLILLLLLLLL
60 60 A K E -B 17 0A 91 118 67 KRKKKRKRKSRRKRRRRRRRRRRKKMRLAIMIKIIILLRLKLLKKKLKKKKKKKHLLLLLKKKKKKLLKL
61 61 A P E -B 16 0A 83 118 29 PPPPPPPPPPPPSPPPPPPPPPPPPPPPPPPPVPPPSSSSPSSAPAPPEPAALPPPSSSSPPPPPQSPPP
62 62 A V - 0 0 36 118 51 IIVVIVIIIILIIIIIIIVVVVIVVCLIIVCIVIIIPPPPSPPVVVPVVVLVVVSAPPPPVVVVVLPPVP
63 63 A Q - 0 0 165 117 67 QQQQQQQQQQQQQHQHHHHHHHQTSAH QAATETTTATTTETSEEENEEEEEEEEGAAATETEEEPTAEA
64 64 A T - 0 0 98 116 68 TTTTTTTTTTTATAAAAAAAAAAAADG EDDEDQQSSSSESSEEENGEEEEEEGNSSSSEDEEEDSAES
65 65 A E + 0 0 127 113 52 EEEEEEEEEEEEEDEEDDDDDDDDDHG DHDGDAAEEEEGEEGGG GGGGGG AEEEEGPGGGAEEGD
66 66 A A + 0 0 71 104 94 AAAAAAAAAAAAATAATTTTTTTMMPG MPIKIPP R KRK KRMKKR E VRKRRRLVSRE
67 67 A W - 0 0 234 104 87 WWWWWWWWWWWWWWWWWWWWWWWLLWW SWQRQPP H LKR RKLQQK G AKKKKKRAAKT
68 68 A V - 0 0 130 101 76 V EEVVEEEESEEEEEEEEEEEDWE M GTDNDAA S LAS SASCCA T NA AAASNAAN
69 69 A R + 0 0 237 99 72 R EECREEEE EEDEEDDEEDDEQE D NARERAA D EKN NKIKKK N IK KKK IRKD
70 70 A D - 0 0 107 99 42 D EEVDEEEE EEEEEEEEEEEEED S IPIDIVV D EEE EEDIIE E EE EEE EAEN
71 71 A P S S+ 0 0 132 98 52 GGNPGGGG EGESEEEEEEEEED P HPPDPSS E DDD DDDDDD E QD DDD QGDE
72 72 A N S S- 0 0 119 98 70 TTSNTTTT GTESDEEEEEEMES D DPEGEAA G GSG GSGGGS R NS NSS NGST
73 73 A S - 0 0 99 89 61 AS T T ATTTTTTGD P NSPGPAA M SGS SGGSSG S AG GGG AEGP
74 74 A G + 0 0 57 71 83 GA G EIR RPP G V L L ATT A QN NNN QSN
75 75 A P S S- 0 0 131 69 64 PH SAR RMM K K K K KKK EK KKK EDK
76 76 A S - 0 0 104 65 55 R NP AA P P P P APP NP PPP NAP
77 77 A S 0 0 121 62 67 L V LL K K K K KKK M MMM AM
78 78 A G 0 0 126 58 30 GG S S S S SSS S SSS AS
## ALIGNMENTS 71 - 117
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....8....:....9....:....0....:....1....:....2....:....3....:....4
1 1 A G 0 0 133 19 44 S S S S A S
2 2 A S - 0 0 125 78 66 AAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAASAAAAAAASADNA
3 3 A S S S+ 0 0 139 82 71 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSNSSSSSSSNSANA
4 4 A G + 0 0 80 83 55 TTTTTAATATATTTTTATTTTTTATAATTTTTATAATTTTTTSTAAV
5 5 A S - 0 0 112 83 91 QQQQQSQQQQQQQQQQQQQQQQQQQLQQQQQQLQVQQQQQQQLQPIP
6 6 A S + 0 0 123 84 46 PPPPPGPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPEPI
7 7 A G - 0 0 72 85 85 TTTTTSTTSTTTTSTTTTTTTTTTTSTTTTTTSTLTTTTTTTSTKDS
8 8 A K - 0 0 146 105 78 HHHHHQHHHHHHHHHHHHHHHHHHHHHHHHHHHHKHHHHHHHHHTKH
9 9 A V - 0 0 104 106 86 SSSSSSSSSSSSASSSSSSSSSSSSSSSSSSSSSQSSSSSSSTSTES
10 10 A W - 0 0 29 118 2 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
11 11 A K > - 0 0 118 118 22 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKE
12 12 A P T 3 S+ 0 0 90 118 58 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVIVVIV
13 13 A G T 3 S+ 0 0 51 118 4 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
14 14 A D < - 0 0 74 118 5 DDDDDEDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
15 15 A E E +A 30 0A 88 118 73 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKSKKKKKKKKKNSS
16 16 A C E -AB 29 61A 0 118 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
17 17 A F E -AB 28 60A 65 118 66 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMNMMMMMMMMMMIM
18 18 A A E -AB 27 59A 0 118 5 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAASA
19 19 A L E -A 26 0A 45 118 55 IIIIIVVIVIIIIIIIVVIIIIIIIVVVIIIIIVVIIIVVIVIIVVV
20 20 A Y > - 0 0 44 118 18 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
21 21 A W T 4 S+ 0 0 147 118 55 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSNSS
22 22 A E T 4 S+ 0 0 134 118 13 EEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEHEE
23 23 A D T 4 S- 0 0 61 118 0 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
24 24 A N < + 0 0 108 118 41 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
25 25 A K - 0 0 116 118 81 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQNQQQQQQQQQQIQ
26 26 A F E +A 19 0A 99 118 78 CCCCCWCCCCCCCCCCCCCCCCCCCCCCCCCCCCVCCCCCCCLCSAL
27 27 A Y E -A 18 0A 63 118 1 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
28 28 A R E +A 17 0A 94 118 78 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEPEEEEEEEEEEPE
29 29 A A E -AC 16 45A 4 117 1 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
30 30 A E E -AC 15 44A 59 118 43 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEETEEEEEEEEEETE
31 31 A V E + C 0 43A 0 118 9 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
32 32 A E E - 0 0A 75 118 49 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAEEEEEEEEEEKE
33 33 A A E - C 0 42A 35 118 68 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEGSEEEEEEEEEESE
34 34 A L E - C 0 41A 74 118 32 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIVI
35 35 A H - 0 0 86 117 53 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDNDDDDDDDDDDDD
36 36 A S S S+ 0 0 117 111 96 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEELEEEEEEEQEVHE
37 37 A S S S- 0 0 93 112 71 EEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEKEEEEEEEEEEEE
38 38 A G S S+ 0 0 48 118 73 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNRNNNNNNNNNNKN
39 39 A M S S+ 0 0 127 118 81 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
40 40 A T E - D 0 55A 27 118 5 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
41 41 A A E -CD 34 54A 3 118 43 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAGAACA
42 42 A V E -CD 33 53A 52 118 65 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAVAAAAAAAAAAIA
43 43 A V E -CD 31 52A 0 117 16 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIVIIIIIIIIIVVI
44 44 A K E -CD 30 51A 76 117 81 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTVT
45 45 A F E >>> -CD 29 50A 1 118 2 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFYFFFFFFFFFFYF
46 46 A T T 345S+ 0 0 87 118 78 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAAAAAAAALTL
47 47 A D T 345S- 0 0 77 118 37 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGVGGGGGVGVGGGDG
48 48 A Y T <45S- 0 0 179 118 1 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
49 49 A G T <5 + 0 0 29 118 6 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
50 50 A N E < -D 45 0A 54 118 2 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
51 51 A Y E -D 44 0A 130 118 100 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAKAAAAAAAAAAEA
52 52 A E E -D 43 0A 49 118 1 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEEEE
53 53 A E E +D 42 0A 143 118 80 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVEVVVVVVVVVVEV
54 54 A V E -D 41 0A 11 118 77 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTQTTTTTTTVTIQV
55 55 A L E > -D 40 0A 66 118 95 PPPPPSPPPPPPPPPPPPPPPPPPPPPPPPPPPPNPPPPPPPPPPSP
56 56 A L G > S+ 0 0 40 118 24 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
57 57 A S G 3 S+ 0 0 99 118 96 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLALLLLLLLVLHLQ
58 58 A N G < S+ 0 0 61 118 32 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNDNNNNNNNNNMDN
59 59 A I E < -B 18 0A 10 118 40 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
60 60 A K E -B 17 0A 91 118 67 KKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKLKKKKKKKKKRQK
61 61 A P E -B 16 0A 83 118 29 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPSA
62 62 A V - 0 0 36 118 51 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVPVVVVVVVVVAQV
63 63 A Q - 0 0 165 117 67 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAEEEEEEEEEENE
64 64 A T - 0 0 98 116 68 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEESEEEEEEEDEQSE
65 65 A E + 0 0 127 113 52 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGEG
66 66 A A + 0 0 71 104 94 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRERRRRRRRNRKEK
67 67 A W - 0 0 234 104 87 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKTKKKKKKKDKTEK
68 68 A V - 0 0 130 101 76 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANAAAAAAASASVS
69 69 A R + 0 0 237 99 72 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKEKKKKKKKEKKEE
70 70 A D - 0 0 107 99 42 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEENEEEEEEEEEDME
71 71 A P S S+ 0 0 132 98 52 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDEDDDDDDDLDEGD
72 72 A N S S- 0 0 119 98 70 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSSSSSSSGSGNG
73 73 A S - 0 0 99 89 61 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGPGGGGGGGSGSAG
74 74 A G + 0 0 57 71 83 SNNNS NNNNSNNNNNNSNNSNNNNNSNNNNNNN SNNNNNNDNKAK
75 75 A P S S- 0 0 131 69 64 KKKKK KKKKKKKKKKKKKKKKKKKKKKKKKKKK KKKKKKKKKPQS
76 76 A S - 0 0 104 65 55 PPPPP PPPPPPPPPPPPPPPPPPPPPPPPPPPP PPPPPPPPPK K
77 77 A S 0 0 121 62 67 MMMMM MMMMMMMMMMMMMMMMMMMMMMMMMMMM MMMMMMMKMS S
78 78 A G 0 0 126 58 30 SSSSS SSSSSSSSSSSSSSSSSSSSSSSSSSSS SSSSSSSSS
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 11 5 0 74 0 0 0 0 0 0 0 11 0 19 0 0 0.854 28 0.56
2 2 A 0 0 0 1 0 0 0 1 69 3 8 0 0 0 0 0 0 0 17 1 78 0 0 1.012 33 0.34
3 3 A 1 1 0 0 0 0 0 1 6 4 66 9 0 0 0 0 2 0 10 0 82 0 0 1.256 41 0.29
4 4 A 1 0 2 0 0 0 0 4 28 2 5 57 0 0 0 0 0 0 0 1 83 0 0 1.230 41 0.44
5 5 A 1 11 4 0 0 0 0 2 7 4 6 11 0 0 0 0 51 4 0 0 83 0 0 1.689 56 0.09
6 6 A 0 0 1 0 0 0 1 2 1 79 11 1 1 0 0 0 0 1 0 1 84 0 0 0.887 29 0.53
7 7 A 1 13 1 2 0 0 0 5 0 2 19 49 0 0 0 1 2 1 1 1 85 0 0 1.649 55 0.15
8 8 A 1 2 0 0 0 3 0 0 1 0 0 4 0 52 4 31 2 0 0 0 105 0 0 1.293 43 0.22
9 9 A 4 4 2 8 0 0 0 2 2 3 54 7 0 0 0 1 13 1 0 0 106 0 0 1.651 55 0.14
10 10 A 0 1 0 0 2 97 0 0 0 0 0 0 0 0 1 0 0 0 0 0 118 0 0 0.183 6 0.98
11 11 A 0 0 0 0 0 0 0 0 0 0 0 1 0 0 11 83 3 1 1 0 118 0 0 0.633 21 0.78
12 12 A 67 0 3 0 0 0 0 0 2 24 0 2 0 0 1 1 1 0 0 0 118 0 0 0.984 32 0.42
13 13 A 0 0 0 0 0 0 0 97 0 0 0 0 0 0 0 0 0 1 1 1 118 0 0 0.146 4 0.95
14 14 A 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 2 0 97 118 0 0 0.183 6 0.94
15 15 A 0 2 0 1 0 0 1 0 2 0 5 2 0 4 12 47 2 20 3 0 118 0 0 1.667 55 0.26
16 16 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 118 0 0 0.000 0 1.00
17 17 A 0 9 2 54 20 0 0 0 0 0 8 0 4 0 0 0 1 0 1 0 118 0 0 1.370 45 0.34
18 18 A 0 0 0 0 0 0 0 0 97 0 3 0 0 0 0 0 0 0 0 0 118 0 0 0.118 3 0.95
19 19 A 22 24 42 1 0 0 0 0 1 0 0 2 0 0 1 8 0 0 0 0 118 0 0 1.439 48 0.45
20 20 A 0 0 0 0 0 67 32 0 0 0 0 0 0 1 0 0 0 0 0 0 118 0 0 0.674 22 0.82
21 21 A 0 0 0 0 0 31 0 1 1 0 64 1 0 0 0 1 0 0 2 0 118 0 0 0.876 29 0.45
22 22 A 0 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 4 89 3 2 118 0 0 0.522 17 0.86
23 23 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 118 0 0 0.000 0 1.00
24 24 A 0 0 0 0 0 0 0 74 0 0 1 0 0 2 0 0 0 0 24 0 118 0 1 0.676 22 0.58
25 25 A 1 1 1 1 0 0 0 2 0 0 0 0 9 0 3 25 53 0 3 1 118 0 0 1.384 46 0.19
26 26 A 12 3 6 1 25 2 7 0 1 1 1 0 42 0 0 0 0 0 0 0 118 0 0 1.657 55 0.21
27 27 A 0 0 0 0 0 0 99 0 0 0 0 0 0 0 0 0 0 1 0 0 118 0 0 0.049 1 0.98
28 28 A 0 1 0 0 0 0 0 0 1 14 0 2 0 2 21 2 2 53 3 1 118 1 0 1.426 47 0.22
29 29 A 0 0 0 0 0 0 0 1 99 0 0 0 0 0 0 0 0 0 0 0 117 0 0 0.049 1 0.99
30 30 A 0 0 1 1 0 0 0 0 0 0 0 14 0 0 2 3 2 78 0 0 118 0 0 0.786 26 0.57
31 31 A 17 0 83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 118 0 0 0.455 15 0.90
32 32 A 0 0 0 1 0 0 0 0 12 0 0 8 0 0 1 3 0 73 1 2 118 0 0 0.976 32 0.51
33 33 A 0 0 0 0 0 0 1 5 24 0 14 1 0 0 0 0 0 53 2 2 118 0 0 1.321 44 0.32
34 34 A 11 24 63 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 118 1 0 0.970 32 0.67
35 35 A 0 0 0 0 0 0 0 1 1 0 4 0 0 26 0 1 0 0 3 65 117 6 1 0.980 32 0.46
36 36 A 1 3 0 0 9 1 0 2 1 5 23 0 0 1 6 0 2 47 0 0 111 0 0 1.652 55 0.04
37 37 A 0 0 0 0 0 0 0 0 0 0 26 1 0 1 0 14 0 54 1 3 112 0 0 1.182 39 0.29
38 38 A 0 0 0 0 0 0 0 24 1 1 1 1 0 1 11 5 1 3 53 0 118 0 0 1.410 47 0.27
39 39 A 0 0 0 15 0 0 0 56 0 0 3 6 1 0 3 4 0 9 3 0 118 0 0 1.476 49 0.19
40 40 A 0 0 2 0 0 0 0 1 0 0 0 97 0 0 0 0 0 0 0 0 118 0 0 0.135 4 0.95
41 41 A 1 0 0 0 2 0 1 1 76 0 0 0 19 0 0 0 0 0 0 0 118 0 0 0.716 23 0.57
42 42 A 41 0 3 2 0 0 0 0 53 0 0 2 0 1 0 0 0 0 0 0 118 1 0 0.976 32 0.35
43 43 A 57 0 42 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 117 0 0 0.724 24 0.83
44 44 A 15 1 0 0 2 0 0 0 0 0 0 54 0 3 1 22 2 0 1 0 117 0 0 1.311 43 0.19
45 45 A 0 0 0 0 86 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 118 0 0 0.412 13 0.98
46 46 A 3 4 9 1 0 0 0 0 46 0 9 20 4 0 0 3 0 0 0 0 118 0 0 1.640 54 0.22
47 47 A 3 0 0 0 0 0 0 67 0 0 0 0 0 1 0 0 0 6 0 24 118 0 0 0.911 30 0.62
48 48 A 0 0 0 0 2 0 97 0 0 0 0 0 1 0 0 0 0 0 0 0 118 0 0 0.135 4 0.99
49 49 A 0 0 0 0 0 0 0 97 0 0 0 0 0 0 0 0 0 3 0 1 118 0 0 0.167 5 0.94
50 50 A 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 99 0 118 0 0 0.049 1 0.98
51 51 A 1 0 0 0 2 0 25 0 53 0 0 1 2 2 11 1 1 3 0 0 118 0 0 1.392 46 -0.01
52 52 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 98 0 2 118 0 0 0.086 2 0.99
53 53 A 52 2 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 45 0 0 118 0 0 0.851 28 0.19
54 54 A 36 1 7 0 0 0 0 0 0 0 0 43 0 0 0 0 14 0 0 0 118 0 0 1.224 40 0.23
55 55 A 0 30 0 0 0 0 0 0 2 52 3 1 0 0 0 1 0 1 12 0 118 0 0 1.238 41 0.05
56 56 A 1 87 2 3 0 0 0 0 1 0 0 0 0 0 0 2 3 0 1 1 118 0 0 0.627 20 0.75
57 57 A 3 40 0 0 5 0 0 1 3 0 32 5 0 2 0 0 8 2 0 1 118 0 0 1.637 54 0.03
58 58 A 0 0 0 1 0 0 0 1 0 0 1 0 0 1 0 0 0 1 74 22 118 0 0 0.760 25 0.68
59 59 A 1 68 25 1 0 0 0 0 0 1 0 0 4 0 0 0 0 0 0 0 118 0 0 0.867 28 0.60
60 60 A 0 14 4 2 0 0 0 0 1 0 1 0 0 1 16 61 1 0 0 0 118 0 0 1.231 41 0.32
61 61 A 1 1 0 0 0 0 0 0 4 81 11 0 0 0 0 0 1 1 0 0 118 0 0 0.707 23 0.70
62 62 A 60 3 18 0 0 0 0 0 2 13 2 0 2 0 0 0 1 0 0 0 118 0 0 1.238 41 0.48
63 63 A 0 0 0 0 0 0 0 1 9 1 2 10 0 8 0 0 15 54 2 0 117 0 0 1.475 49 0.33
64 64 A 0 0 0 0 0 0 0 3 12 0 12 11 0 0 0 0 3 52 2 6 116 0 0 1.525 50 0.31
65 65 A 0 0 0 0 0 0 0 55 4 1 0 0 0 2 0 0 0 26 0 13 113 0 0 1.178 39 0.48
66 66 A 2 1 2 4 0 0 0 1 15 4 1 8 0 0 49 9 0 4 1 0 104 0 0 1.753 58 0.06
67 67 A 0 4 0 0 0 26 0 1 3 2 1 3 0 1 4 50 4 1 0 1 104 0 0 1.576 52 0.13
68 68 A 5 1 0 1 0 1 0 1 52 0 9 2 2 0 0 0 0 18 5 3 101 0 0 1.601 53 0.23
69 69 A 0 0 3 0 0 0 0 0 3 0 0 0 1 0 6 54 1 20 4 8 99 0 0 1.465 48 0.28
70 70 A 3 0 5 1 0 0 0 0 1 1 1 0 0 0 0 0 0 78 2 8 99 0 0 0.920 30 0.58
71 71 A 0 1 0 0 0 0 0 9 0 6 3 0 0 1 0 0 2 16 1 60 98 0 0 1.318 44 0.47
72 72 A 0 0 0 1 0 0 0 13 2 1 53 9 0 0 1 0 0 10 6 3 98 0 0 1.554 51 0.30
73 73 A 0 0 0 1 0 0 0 61 8 6 12 9 0 0 0 0 0 1 1 1 89 0 0 1.342 44 0.39
74 74 A 1 3 1 0 0 0 0 6 6 3 11 3 0 0 3 3 3 1 55 1 71 0 0 1.743 58 0.17
75 75 A 0 0 0 3 0 0 0 0 1 4 3 0 0 1 3 78 1 3 0 1 69 0 0 0.984 32 0.35
76 76 A 0 0 0 0 0 0 0 0 6 83 2 0 0 0 2 3 0 0 5 0 65 0 0 0.703 23 0.45
77 77 A 2 5 0 74 0 0 0 0 2 0 5 0 0 0 0 13 0 0 0 0 62 0 0 0.912 30 0.32
78 78 A 0 0 0 0 0 0 0 5 2 0 93 0 0 0 0 0 0 0 0 0 58 0 0 0.290 9 0.69
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
11 16 497 7 nKPIYDYPk
62 36 127 2 gGSs
//