Complet list of 2d9n hssp file
Complete list of 2d9n.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 2D9N
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-18
HEADER RNA BINDING PROTEIN 12-DEC-05 2D9N
COMPND MOL_ID: 1; MOLECULE: CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR,
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: HOMO SAPIENS; ORGANISM_COMMON: HUMAN;
AUTHOR C.ABE,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA,M.SHIROUZU, S.YOKOYAMA,RIKEN ST
DBREF 2D9N A 61 126 UNP O95639 CPSF4_HUMAN 61 126
SEQLENGTH 77
NCHAIN 1 chain(s) in 2D9N data set
NALIGN 151
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : B2LVG5_MOUSE 1.00 1.00 7 71 62 126 65 0 0 243 B2LVG5 Cleavage and polyadenylation specific factor 4 isoform 1 OS=Mus musculus GN=Cpsf4 PE=2 SV=1
2 : B2LVG6_MOUSE 1.00 1.00 7 71 62 126 65 0 0 244 B2LVG6 Cleavage and polyadenylation specific factor 4 isoform 2 OS=Mus musculus GN=Cpsf4 PE=2 SV=1
3 : B7Z7B0_HUMAN 1.00 1.00 7 71 9 73 65 0 0 191 B7Z7B0 Cleavage and polyadenylation-specificity factor subunit 4 OS=Homo sapiens GN=CPSF4 PE=2 SV=1
4 : C9K0K2_HUMAN 1.00 1.00 7 71 9 73 65 0 0 112 C9K0K2 Cleavage and polyadenylation-specificity factor subunit 4 (Fragment) OS=Homo sapiens GN=CPSF4 PE=2 SV=1
5 : CPSF4_BOVIN 1.00 1.00 7 71 62 126 65 0 0 243 O19137 Cleavage and polyadenylation specificity factor subunit 4 OS=Bos taurus GN=CPSF4 PE=1 SV=1
6 : CPSF4_HUMAN 2D9N 1.00 1.00 7 71 62 126 65 0 0 269 O95639 Cleavage and polyadenylation specificity factor subunit 4 OS=Homo sapiens GN=CPSF4 PE=1 SV=1
7 : CPSF4_RAT 1.00 1.00 7 71 62 126 65 0 0 243 Q5FVR7 Cleavage and polyadenylation specificity factor subunit 4 OS=Rattus norvegicus GN=Cpsf4 PE=2 SV=1
8 : CPSF4_XENLA 1.00 1.00 7 71 62 126 65 0 0 269 Q6DJP7 Cleavage and polyadenylation specificity factor subunit 4 OS=Xenopus laevis GN=cpsf4 PE=2 SV=1
9 : CPSF4_XENTR 1.00 1.00 7 71 62 126 65 0 0 269 Q66KE3 Cleavage and polyadenylation specificity factor subunit 4 OS=Xenopus tropicalis GN=cpsf4 PE=2 SV=1
10 : D2HP69_AILME 1.00 1.00 7 71 62 126 65 0 0 252 D2HP69 Putative uncharacterized protein (Fragment) OS=Ailuropoda melanoleuca GN=PANDA_013548 PE=4 SV=1
11 : D4A905_RAT 1.00 1.00 7 71 62 126 65 0 0 243 D4A905 Protein LOC100360200 OS=Rattus norvegicus GN=LOC100360200 PE=4 SV=1
12 : E0CXT7_MOUSE 1.00 1.00 7 71 62 126 65 0 0 269 E0CXT7 Cleavage and polyadenylation-specificity factor subunit 4 OS=Mus musculus GN=Cpsf4 PE=2 SV=1
13 : E1BV31_CHICK 1.00 1.00 7 71 62 126 65 0 0 243 E1BV31 Uncharacterized protein OS=Gallus gallus GN=CPSF4 PE=4 SV=1
14 : E2RBM0_CANFA 1.00 1.00 7 71 60 124 65 0 0 164 E2RBM0 Uncharacterized protein OS=Canis familiaris GN=CPSF4 PE=4 SV=2
15 : E3TFL1_ICTPU 1.00 1.00 9 71 64 126 63 0 0 271 E3TFL1 Cleavage and polyadenylation specificity factor subunit 4 OS=Ictalurus punctatus GN=CPSF4 PE=2 SV=1
16 : F1Q949_DANRE 1.00 1.00 7 71 62 126 65 0 0 271 F1Q949 Uncharacterized protein OS=Danio rerio GN=cpsf4 PE=4 SV=1
17 : F1REX3_PIG 1.00 1.00 7 71 62 126 65 0 0 269 F1REX3 Uncharacterized protein OS=Sus scrofa GN=LOC100518830 PE=4 SV=2
18 : F6PXL2_ORNAN 1.00 1.00 7 71 28 92 65 0 0 234 F6PXL2 Uncharacterized protein (Fragment) OS=Ornithorhynchus anatinus GN=CPSF4 PE=4 SV=1
19 : F6QYI7_MACMU 1.00 1.00 7 71 62 126 65 0 0 269 F6QYI7 Cleavage and polyadenylation specificity factor subunit 4 isoform 1 OS=Macaca mulatta GN=CPSF4 PE=2 SV=1
20 : F7B6Z5_MOUSE 1.00 1.00 7 71 30 94 65 0 0 208 F7B6Z5 Cleavage and polyadenylation-specificity factor subunit 4 (Fragment) OS=Mus musculus GN=Cpsf4 PE=4 SV=1
21 : F7BI49_MACMU 1.00 1.00 7 71 62 126 65 0 0 243 F7BI49 Uncharacterized protein OS=Macaca mulatta GN=CPSF4 PE=4 SV=1
22 : F7DCT2_HORSE 1.00 1.00 7 71 62 126 65 0 0 269 F7DCT2 Uncharacterized protein OS=Equus caballus GN=CPSF4 PE=4 SV=1
23 : F7FVV8_MONDO 1.00 1.00 7 71 62 126 65 0 0 269 F7FVV8 Uncharacterized protein OS=Monodelphis domestica GN=CPSF4 PE=4 SV=1
24 : F7I7Y0_CALJA 1.00 1.00 7 71 62 126 65 0 0 247 F7I7Y0 Uncharacterized protein OS=Callithrix jacchus GN=CPSF4 PE=4 SV=1
25 : G1LI40_AILME 1.00 1.00 7 71 62 126 65 0 0 269 G1LI40 Uncharacterized protein OS=Ailuropoda melanoleuca GN=CPSF4 PE=4 SV=1
26 : G1MYH9_MELGA 1.00 1.00 7 71 28 92 65 0 0 209 G1MYH9 Uncharacterized protein (Fragment) OS=Meleagris gallopavo GN=CPSF4 PE=4 SV=1
27 : G1PH56_MYOLU 1.00 1.00 7 71 28 92 65 0 0 209 G1PH56 Uncharacterized protein (Fragment) OS=Myotis lucifugus GN=CPSF4 PE=4 SV=1
28 : G1RJR0_NOMLE 1.00 1.00 7 71 62 126 65 0 0 244 G1RJR0 Uncharacterized protein OS=Nomascus leucogenys GN=CPSF4 PE=4 SV=2
29 : G3I385_CRIGR 1.00 1.00 7 71 62 126 65 0 0 274 G3I385 Cleavage and polyadenylation specificity factor subunit 4 OS=Cricetulus griseus GN=I79_017886 PE=4 SV=1
30 : G3NYA8_GASAC 1.00 1.00 7 71 64 128 65 0 0 254 G3NYA8 Uncharacterized protein OS=Gasterosteus aculeatus PE=4 SV=1
31 : G3RGL8_GORGO 1.00 1.00 7 71 62 126 65 0 0 269 G3RGL8 Uncharacterized protein OS=Gorilla gorilla gorilla GN=101136148 PE=4 SV=1
32 : G3SL71_LOXAF 1.00 1.00 7 71 62 126 65 0 0 269 G3SL71 Uncharacterized protein OS=Loxodonta africana GN=CPSF4 PE=4 SV=1
33 : G3WDI8_SARHA 1.00 1.00 7 71 62 126 65 0 0 269 G3WDI8 Uncharacterized protein OS=Sarcophilus harrisii GN=CPSF4 PE=4 SV=1
34 : G7P0A7_MACFA 1.00 1.00 7 71 62 126 65 0 0 269 G7P0A7 Putative uncharacterized protein OS=Macaca fascicularis GN=EGM_12382 PE=4 SV=1
35 : H0UX14_CAVPO 1.00 1.00 7 71 62 126 65 0 0 244 H0UX14 Uncharacterized protein OS=Cavia porcellus GN=CPSF4 PE=4 SV=1
36 : H0X3M7_OTOGA 1.00 1.00 7 71 62 126 65 0 0 269 H0X3M7 Uncharacterized protein OS=Otolemur garnettii GN=CPSF4 PE=4 SV=1
37 : H0ZB24_TAEGU 1.00 1.00 7 71 64 128 65 0 0 245 H0ZB24 Uncharacterized protein OS=Taeniopygia guttata GN=CPSF4 PE=4 SV=1
38 : H2MF65_ORYLA 1.00 1.00 7 71 62 126 65 0 0 265 H2MF65 Uncharacterized protein OS=Oryzias latipes GN=LOC101173062 PE=4 SV=1
39 : H2MF66_ORYLA 1.00 1.00 7 71 62 126 65 0 0 281 H2MF66 Uncharacterized protein OS=Oryzias latipes GN=LOC101173062 PE=4 SV=1
40 : H2QV04_PANTR 1.00 1.00 7 71 62 126 65 0 0 269 H2QV04 Cleavage and polyadenylation specific factor 4, 30kDa OS=Pan troglodytes GN=CPSF4 PE=2 SV=1
41 : H2S796_TAKRU 1.00 1.00 7 71 62 126 65 0 0 273 H2S796 Uncharacterized protein OS=Takifugu rubripes GN=LOC101069876 PE=4 SV=1
42 : H2S797_TAKRU 1.00 1.00 7 71 62 126 65 0 0 244 H2S797 Uncharacterized protein OS=Takifugu rubripes GN=LOC101069876 PE=4 SV=1
43 : H3CL89_TETNG 1.00 1.00 7 71 62 126 65 0 0 263 H3CL89 Uncharacterized protein OS=Tetraodon nigroviridis PE=4 SV=1
44 : H7C016_HUMAN 1.00 1.00 7 71 29 93 65 0 0 229 H7C016 Cleavage and polyadenylation-specificity factor subunit 4 (Fragment) OS=Homo sapiens GN=CPSF4 PE=2 SV=1
45 : H9FP23_MACMU 1.00 1.00 7 71 62 126 65 0 0 244 H9FP23 Cleavage and polyadenylation specificity factor subunit 4 isoform 2 OS=Macaca mulatta GN=CPSF4 PE=2 SV=1
46 : I3JP83_ORENI 1.00 1.00 7 71 62 126 65 0 0 265 I3JP83 Uncharacterized protein OS=Oreochromis niloticus GN=LOC100698039 PE=4 SV=1
47 : I3LCK9_PIG 1.00 1.00 7 71 36 100 65 0 0 243 I3LCK9 Uncharacterized protein (Fragment) OS=Sus scrofa GN=LOC100738395 PE=4 SV=1
48 : I3LZ23_SPETR 1.00 1.00 7 71 62 126 65 0 0 269 I3LZ23 Uncharacterized protein OS=Spermophilus tridecemlineatus GN=CPSF4 PE=4 SV=1
49 : J9P398_CANFA 1.00 1.00 7 71 62 126 65 0 0 269 J9P398 Uncharacterized protein OS=Canis familiaris GN=CPSF4 PE=4 SV=1
50 : K7DTE1_PANTR 1.00 1.00 7 71 62 126 65 0 0 244 K7DTE1 Cleavage and polyadenylation specific factor 4, 30kDa OS=Pan troglodytes GN=CPSF4 PE=2 SV=1
51 : K7FWN1_PELSI 1.00 1.00 7 71 9 73 65 0 0 216 K7FWN1 Uncharacterized protein OS=Pelodiscus sinensis GN=CPSF4 PE=4 SV=1
52 : K9IH24_DESRO 1.00 1.00 7 71 62 126 65 0 0 243 K9IH24 Putative polyadenylation factor i complex subunit yth1 cpsf subunit OS=Desmodus rotundus PE=2 SV=1
53 : K9IIQ5_DESRO 1.00 1.00 7 71 62 126 65 0 0 279 K9IIQ5 Putative polyadenylation factor i complex subunit yth1 cpsf subunit OS=Desmodus rotundus PE=2 SV=1
54 : L5KIZ1_PTEAL 1.00 1.00 7 71 62 126 65 0 0 269 L5KIZ1 Cleavage and polyadenylation specificity factor subunit 4 OS=Pteropus alecto GN=PAL_GLEAN10025121 PE=4 SV=1
55 : L5MG78_MYODS 1.00 1.00 7 71 62 126 65 0 0 269 L5MG78 Cleavage and polyadenylation specificity factor subunit 4 OS=Myotis davidii GN=MDA_GLEAN10002667 PE=4 SV=1
56 : L9KPL7_TUPCH 1.00 1.00 7 71 31 95 65 0 0 223 L9KPL7 Cleavage and polyadenylation specificity factor subunit 4 OS=Tupaia chinensis GN=TREES_T100020560 PE=4 SV=1
57 : M3WLW1_FELCA 1.00 1.00 7 71 62 126 65 0 0 269 M3WLW1 Uncharacterized protein OS=Felis catus GN=CPSF4 PE=4 SV=1
58 : M3YYJ5_MUSPF 1.00 1.00 7 71 62 126 65 0 0 269 M3YYJ5 Uncharacterized protein OS=Mustela putorius furo GN=CPSF4 PE=4 SV=1
59 : M3ZN55_XIPMA 1.00 1.00 7 71 62 126 65 0 0 264 M3ZN55 Uncharacterized protein OS=Xiphophorus maculatus PE=4 SV=1
60 : Q28FZ4_XENTR 1.00 1.00 7 71 62 126 65 0 0 279 Q28FZ4 Cleavage and polyadenylation-specificity factor subunit 4 OS=Xenopus tropicalis GN=cpsf4 PE=2 SV=1
61 : Q98881_DANRE 1.00 1.00 7 71 62 126 65 0 0 271 Q98881 Nar protein OS=Danio rerio GN=cpsf4 PE=2 SV=1
62 : Q9QYU6_RAT 1.00 1.00 7 71 61 125 65 0 0 229 Q9QYU6 Zinc finger protein (Fragment) OS=Rattus norvegicus GN=Cpsf4 PE=2 SV=1
63 : S7NBC6_MYOBR 1.00 1.00 7 71 62 126 65 0 0 269 S7NBC6 Cleavage and polyadenylation specificity factor subunit 4 OS=Myotis brandtii GN=D623_10026936 PE=4 SV=1
64 : U3BK11_CALJA 1.00 1.00 7 71 62 126 65 0 0 269 U3BK11 Cleavage and polyadenylation specificity factor subunit 4 isoform 1 OS=Callithrix jacchus GN=CPSF4 PE=2 SV=1
65 : U3C1K3_CALJA 1.00 1.00 7 71 62 126 65 0 0 244 U3C1K3 Cleavage and polyadenylation specificity factor subunit 4 isoform 2 OS=Callithrix jacchus GN=CPSF4 PE=2 SV=1
66 : U3F879_CALJA 1.00 1.00 7 71 62 126 65 0 0 243 U3F879 Cleavage and polyadenylation specificity factor subunit 4 isoform 2 OS=Callithrix jacchus GN=CPSF4 PE=2 SV=1
67 : U3IH73_ANAPL 1.00 1.00 7 71 28 92 65 0 0 209 U3IH73 Uncharacterized protein (Fragment) OS=Anas platyrhynchos GN=CPSF4 PE=4 SV=1
68 : U3KH95_FICAL 1.00 1.00 7 71 62 126 65 0 0 243 U3KH95 Uncharacterized protein OS=Ficedula albicollis GN=CPSF4 PE=4 SV=1
69 : U6DCS2_NEOVI 1.00 1.00 7 71 62 126 65 0 0 196 U6DCS2 Cleavage and polyadenylation specificity factor subunit 4 (Fragment) OS=Neovison vison GN=CPSF4 PE=2 SV=1
70 : V9KQY4_CALMI 1.00 1.00 7 71 62 126 65 0 0 270 V9KQY4 Cleavage and polyadenylation specificity factor subunit 4-like protein OS=Callorhynchus milii PE=2 SV=1
71 : W5KS69_ASTMX 1.00 1.00 7 71 62 126 65 0 0 270 W5KS69 Uncharacterized protein OS=Astyanax mexicanus PE=4 SV=1
72 : W5MBM3_LEPOC 1.00 1.00 7 71 62 126 65 0 0 269 W5MBM3 Uncharacterized protein OS=Lepisosteus oculatus PE=4 SV=1
73 : H2PLJ0_PONAB 0.98 0.98 7 71 27 90 65 1 1 233 H2PLJ0 Uncharacterized protein (Fragment) OS=Pongo abelii GN=CPSF4 PE=4 SV=1
74 : H3ARZ7_LATCH 0.98 1.00 7 71 62 126 65 0 0 270 H3ARZ7 Uncharacterized protein OS=Latimeria chalumnae PE=4 SV=1
75 : J3SBZ8_CROAD 0.98 1.00 7 71 62 126 65 0 0 268 J3SBZ8 Cleavage and polyadenylation specificity factor subunit 4-like OS=Crotalus adamanteus PE=2 SV=1
76 : Q9I904_DANRE 0.98 1.00 7 71 62 126 65 0 0 190 Q9I904 No arches (Fragment) OS=Danio rerio GN=cpsf4 PE=4 SV=1
77 : T1E6X3_CROHD 0.98 1.00 7 71 62 126 65 0 0 268 T1E6X3 Cleavage and polyadenylation specificity factor subunit 4-like protein OS=Crotalus horridus PE=2 SV=1
78 : V8NCU0_OPHHA 0.98 1.00 7 71 27 91 65 0 0 234 V8NCU0 Cleavage and polyadenylation specificity factor subunit 4 (Fragment) OS=Ophiophagus hannah GN=CPSF4 PE=4 SV=1
79 : B3RPS1_TRIAD 0.94 0.98 7 71 62 126 65 0 0 257 B3RPS1 Putative uncharacterized protein OS=Trichoplax adhaerens GN=TRIADDRAFT_53642 PE=4 SV=1
80 : A7S8B4_NEMVE 0.92 0.97 7 71 62 126 65 0 0 173 A7S8B4 Predicted protein (Fragment) OS=Nematostella vectensis GN=v1g35001 PE=4 SV=1
81 : G3HNM5_CRIGR 0.92 0.95 7 71 9 73 65 0 0 107 G3HNM5 Cleavage and polyadenylation specificity factor subunit 4 OS=Cricetulus griseus GN=I79_012364 PE=4 SV=1
82 : K7GJV3_PELSI 0.91 0.98 6 71 10 75 66 0 0 192 K7GJV3 Uncharacterized protein (Fragment) OS=Pelodiscus sinensis GN=CPSF4L PE=4 SV=1
83 : E0VYU1_PEDHC 0.89 0.95 7 71 62 126 65 0 0 233 E0VYU1 Cleavage and polyadenylation specificity factor 30 kDa subunit, putative OS=Pediculus humanus subsp. corporis GN=Phum_PHUM519380 PE=4 SV=1
84 : H3BGK0_LATCH 0.89 0.98 7 71 62 126 65 0 0 245 H3BGK0 Uncharacterized protein OS=Latimeria chalumnae PE=4 SV=1
85 : X1Y188_ANODA 0.89 0.95 7 71 89 153 65 0 0 251 X1Y188 Uncharacterized protein OS=Anopheles darlingi PE=4 SV=1
86 : C4WXU7_ACYPI 0.88 0.95 7 71 62 126 65 0 0 148 C4WXU7 ACYPI007246 protein OS=Acyrthosiphon pisum GN=ACYPI007246 PE=2 SV=1
87 : F6U107_MONDO 0.85 0.92 7 71 58 122 65 0 0 162 F6U107 Uncharacterized protein (Fragment) OS=Monodelphis domestica GN=CPSF4L PE=4 SV=1
88 : F1LWJ4_RAT 0.83 0.92 7 71 63 127 65 0 0 243 F1LWJ4 Uncharacterized protein (Fragment) OS=Rattus norvegicus PE=4 SV=1
89 : F7CXF4_MACMU 0.80 0.91 7 71 64 128 65 0 0 174 F7CXF4 Uncharacterized protein OS=Macaca mulatta GN=CPSF4L PE=4 SV=1
90 : G1QL67_NOMLE 0.80 0.91 7 71 62 126 65 0 0 179 G1QL67 Uncharacterized protein OS=Nomascus leucogenys GN=CPSF4L PE=4 SV=1
91 : G3SJG1_GORGO 0.80 0.91 7 71 62 126 65 0 0 179 G3SJG1 Uncharacterized protein OS=Gorilla gorilla gorilla GN=101130969 PE=4 SV=1
92 : G7NJE0_MACMU 0.80 0.91 7 71 62 126 65 0 0 179 G7NJE0 Putative uncharacterized protein OS=Macaca mulatta GN=EGK_08934 PE=4 SV=1
93 : G7PVA9_MACFA 0.80 0.91 7 71 62 126 65 0 0 179 G7PVA9 Putative uncharacterized protein OS=Macaca fascicularis GN=EGM_08126 PE=4 SV=1
94 : H2NUK7_PONAB 0.80 0.92 11 71 2 62 61 0 0 152 H2NUK7 Uncharacterized protein OS=Pongo abelii GN=CPSF4L PE=4 SV=1
95 : E4WW62_OIKDI 0.79 0.93 11 71 66 126 61 0 0 202 E4WW62 Whole genome shotgun assembly, allelic scaffold set, scaffold scaffoldA_1509 OS=Oikopleura dioica GN=GSOID_T00009128001 PE=4 SV=1
96 : H9KVA5_HUMAN 0.79 0.92 11 71 2 62 61 0 0 152 H9KVA5 Putative cleavage and polyadenylation-specificity factor subunit 4-like protein OS=Homo sapiens GN=CPSF4L PE=2 SV=1
97 : U9U648_RHIID 0.79 0.94 9 71 63 125 63 0 0 165 U9U648 Uncharacterized protein OS=Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) GN=GLOINDRAFT_193060 PE=4 SV=1
98 : CPS4L_HUMAN 0.78 0.91 7 71 62 126 65 0 0 179 A6NMK7 Putative cleavage and polyadenylation specificity factor subunit 4-like protein OS=Homo sapiens GN=CPSF4L PE=2 SV=3
99 : H2QDS1_PANTR 0.78 0.91 7 71 62 126 65 0 0 179 H2QDS1 Uncharacterized protein OS=Pan troglodytes GN=CPSF4L PE=4 SV=1
100 : F6RD98_HORSE 0.77 0.89 7 71 62 126 65 0 0 142 F6RD98 Uncharacterized protein OS=Equus caballus GN=CPSF4L PE=4 SV=1
101 : G1PE27_MYOLU 0.77 0.88 7 70 62 125 64 0 0 179 G1PE27 Uncharacterized protein OS=Myotis lucifugus GN=CPSF4L PE=4 SV=1
102 : G3UN75_LOXAF 0.77 0.94 7 71 62 126 65 0 0 176 G3UN75 Uncharacterized protein OS=Loxodonta africana GN=CPSF4L PE=4 SV=1
103 : I3LZB9_SPETR 0.77 0.88 7 71 62 126 65 0 0 169 I3LZB9 Uncharacterized protein OS=Spermophilus tridecemlineatus GN=CPSF4L PE=4 SV=1
104 : D2HUC0_AILME 0.75 0.90 11 71 2 62 61 0 0 102 D2HUC0 Putative uncharacterized protein (Fragment) OS=Ailuropoda melanoleuca GN=PANDA_015854 PE=4 SV=1
105 : D2V3G6_NAEGR 0.75 0.81 8 71 1 64 64 0 0 105 D2V3G6 Predicted protein (Fragment) OS=Naegleria gruberi GN=NAEGRDRAFT_4809 PE=4 SV=1
106 : E9CGL2_CAPO3 0.75 0.91 8 71 64 127 64 0 0 184 E9CGL2 Zinc finger protein OS=Capsaspora owczarzaki (strain ATCC 30864) GN=CAOG_07605 PE=4 SV=1
107 : F4P3G1_BATDJ 0.74 0.92 11 71 49 109 61 0 0 147 F4P3G1 Putative uncharacterized protein (Fragment) OS=Batrachochytrium dendrobatidis (strain JAM81 / FGSC 10211) GN=BATDEDRAFT_5960 PE=4 SV=1
108 : L2GU23_VAVCU 0.74 0.87 11 71 52 112 61 0 0 187 L2GU23 Uncharacterized protein OS=Vavraia culicis (isolate floridensis) GN=VCUG_01360 PE=4 SV=1
109 : L7JY22_TRAHO 0.74 0.87 11 71 52 112 61 0 0 187 L7JY22 Polyadenylation factor I complex, subunit, Yth1 (CPSF subunit) OS=Trachipleistophora hominis GN=THOM_0705 PE=4 SV=1
110 : M3YS58_MUSPF 0.74 0.89 7 71 62 126 65 0 0 167 M3YS58 Uncharacterized protein OS=Mustela putorius furo GN=CPSF4L PE=4 SV=1
111 : M3YS59_MUSPF 0.74 0.89 7 71 58 122 65 0 0 168 M3YS59 Uncharacterized protein (Fragment) OS=Mustela putorius furo GN=CPSF4L PE=4 SV=1
112 : S7W802_SPRLO 0.73 0.87 10 71 49 110 62 0 0 178 S7W802 Uncharacterized protein OS=Spraguea lophii (strain 42_110) GN=SLOPH_1665 PE=4 SV=1
113 : A2A6P9_MOUSE 0.72 0.88 7 71 10 74 65 0 0 153 A2A6P9 DNA segment, Chr 11, ERATO Doi 636, expressed, isoform CRA_e OS=Mus musculus GN=Cpsf4l PE=4 SV=1
114 : H8ZCG8_NEMS1 0.72 0.88 8 71 27 90 64 0 0 159 H8ZCG8 Zinc finger protein OS=Nematocida sp. 1 (strain ERTm2 / ATCC PRA-371) GN=NERG_01411 PE=4 SV=1
115 : Q3TTY7_MOUSE 0.72 0.88 7 71 62 126 65 0 0 160 Q3TTY7 DNA segment, Chr 11, ERATO Doi 636, expressed, isoform CRA_a OS=Mus musculus GN=Cpsf4l PE=2 SV=1
116 : Q91YP9_MOUSE 0.72 0.88 7 71 10 74 65 0 0 176 Q91YP9 Cleavage and polyadenylation specific factor 4-like OS=Mus musculus GN=Cpsf4l PE=2 SV=1
117 : Q9DBA5_MOUSE 0.72 0.88 7 71 10 74 65 0 0 190 Q9DBA5 Protein Cpsf4l OS=Mus musculus GN=Cpsf4l PE=2 SV=1
118 : D3ZC43_RAT 0.71 0.91 7 71 10 74 65 0 0 176 D3ZC43 Protein Cpsf4l OS=Rattus norvegicus GN=Cpsf4l PE=4 SV=2
119 : A3LT53_PICST 0.70 0.84 11 70 69 129 61 1 1 192 A3LT53 Cleavage and polyadenylation specificity factor (Fragment) OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) GN=PICST_27265 PE=4 SV=2
120 : E0S5A8_ENCIT 0.70 0.89 11 71 50 110 61 0 0 176 E0S5A8 Zinc finger domain-containing protein OS=Encephalitozoon intestinalis (strain ATCC 50506) GN=Eint_010300 PE=4 SV=1
121 : I3EG95_NEMP3 0.70 0.88 8 71 27 90 64 0 0 159 I3EG95 Zinc finger protein OS=Nematocida parisii (strain ERTm3) GN=NEQG_01686 PE=4 SV=1
122 : I3EP84_NEMP1 0.70 0.88 8 71 27 90 64 0 0 159 I3EP84 Zinc finger protein OS=Nematocida parisii (strain ERTm1 / ATCC PRA-289) GN=NEPG_01264 PE=4 SV=1
123 : I6THC1_ENCHA 0.70 0.88 12 71 51 110 60 0 0 176 I6THC1 Cleavage and polyadenylation specificity factor subunit Clipper OS=Encephalitozoon hellem (strain ATCC 50504) GN=EHEL_010290 PE=4 SV=1
124 : I6ZRZ8_ENCRO 0.70 0.88 12 71 51 110 60 0 0 176 I6ZRZ8 Zinc finger domain-containing protein OS=Encephalitozoon romaleae (strain SJ-2008) GN=EROM_010210 PE=4 SV=1
125 : M1K9V0_ENCCN 0.70 0.88 12 71 51 110 60 0 0 176 M1K9V0 Zinc finger protein OS=Encephalitozoon cuniculi GN=ECU01_0430 PE=4 SV=1
126 : Q4SVP0_TETNG 0.70 0.70 7 71 62 154 93 1 28 291 Q4SVP0 Chromosome undetermined SCAF13749, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00011892001 PE=4 SV=1
127 : Q8SSM4_ENCCU 0.70 0.88 12 71 51 110 60 0 0 176 Q8SSM4 ZINC FINGER PROTEIN OS=Encephalitozoon cuniculi (strain GB-M1) GN=ECU01_0430 PE=4 SV=1
128 : F6ZK54_CALJA 0.69 0.80 7 71 49 112 65 1 1 165 F6ZK54 Uncharacterized protein (Fragment) OS=Callithrix jacchus GN=CPSF4L PE=4 SV=1
129 : J9DIS1_EDHAE 0.69 0.85 11 71 51 110 61 1 1 176 J9DIS1 Uncharacterized protein OS=Edhazardia aedis (strain USNM 41457) GN=EDEG_00528 PE=4 SV=1
130 : R0KPR1_NOSB1 0.69 0.89 11 71 55 115 61 0 0 168 R0KPR1 Cleavage and polyadenylation specificity factor subunit 4 OS=Nosema bombycis (strain CQ1 / CVCC 102059) GN=CPSF4 PE=4 SV=1
131 : C4XYQ9_CLAL4 0.67 0.84 11 70 6 66 61 1 1 149 C4XYQ9 Putative uncharacterized protein OS=Clavispora lusitaniae (strain ATCC 42720) GN=CLUG_01082 PE=4 SV=1
132 : R0KW57_NOSB1 0.67 0.87 11 71 55 115 61 0 0 168 R0KW57 Cleavage and polyadenylation specificity factor subunit 4 OS=Nosema bombycis (strain CQ1 / CVCC 102059) GN=CPSF4 PE=4 SV=1
133 : B6JVW0_SCHJY 0.65 0.79 11 71 53 114 62 1 1 171 B6JVW0 Zinc finger protein Yth1 OS=Schizosaccharomyces japonicus (strain yFS275 / FY16936) GN=SJAG_00527 PE=4 SV=1
134 : U3KEM1_FICAL 0.65 0.80 1 71 37 107 71 0 0 153 U3KEM1 Uncharacterized protein OS=Ficedula albicollis GN=CPSF4L PE=4 SV=1
135 : L1J890_GUITH 0.62 0.80 12 71 1 59 60 1 1 93 L1J890 Uncharacterized protein (Fragment) OS=Guillardia theta CCMP2712 GN=GUITHDRAFT_46950 PE=4 SV=1
136 : F4RP44_MELLP 0.61 0.80 12 69 8 66 59 1 1 112 F4RP44 Putative uncharacterized protein (Fragment) OS=Melampsora larici-populina (strain 98AG31 / pathotype 3-4-7) GN=MELLADRAFT_29924 PE=4 SV=1
137 : C4VA31_NOSCE 0.58 0.82 12 71 53 110 60 1 2 159 C4VA31 Putative uncharacterized protein OS=Nosema ceranae (strain BRL01) GN=NCER_101464 PE=4 SV=1
138 : S9VTZ0_SCHCR 0.57 0.75 1 71 42 113 72 1 1 170 S9VTZ0 Zinc finger protein Yth1 OS=Schizosaccharomyces cryophilus (strain OY26 / ATCC MYA-4695 / CBS 11777 / NBRC 106824 / NRRL Y48691) GN=SPOG_01530 PE=4 SV=1
139 : T0L227_9MICR 0.57 0.80 12 71 55 112 60 1 2 163 T0L227 Cleavage and polyadenylation specific factor 30kda OS=Nosema apis BRL 01 GN=NAPIS_ORF00859 PE=4 SV=1
140 : YTH1_SCHPO 0.57 0.75 1 71 42 113 72 1 1 170 Q9UTD1 mRNA 3'-end-processing protein yth1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=yth1 PE=3 SV=1
141 : S9Q5S4_SCHOY 0.56 0.75 1 71 42 113 72 1 1 170 S9Q5S4 Zinc finger protein Yth1 OS=Schizosaccharomyces octosporus (strain yFS286) GN=SOCG_02472 PE=4 SV=1
142 : B8C4J7_THAPS 0.52 0.71 9 66 3 57 58 1 3 103 B8C4J7 Predicted protein (Fragment) OS=Thalassiosira pseudonana GN=THAPSDRAFT_19126 PE=4 SV=1
143 : M2ZJK7_MYCFI 0.45 0.64 2 67 29 95 67 1 1 136 M2ZJK7 Uncharacterized protein (Fragment) OS=Mycosphaerella fijiensis (strain CIRAD86) GN=MYCFIDRAFT_23302 PE=4 SV=1
144 : B3VZ62_POPTN 0.44 0.69 2 65 34 97 64 0 0 118 B3VZ62 C-x8-C-x5-C-x3-H type Zn-finger (Fragment) OS=Populus tremula PE=4 SV=1
145 : B3VZ65_POPTN 0.44 0.68 2 69 34 99 68 1 2 118 B3VZ65 C-x8-C-x5-C-x3-H type Zn-finger (Fragment) OS=Populus tremula PE=4 SV=1
146 : M2N848_BAUCO 0.44 0.68 2 68 26 93 68 1 1 133 M2N848 Uncharacterized protein (Fragment) OS=Baudoinia compniacensis (strain UAMH 10762) GN=BAUCODRAFT_42995 PE=4 SV=1
147 : B3VZ63_POPTN 0.42 0.66 2 65 34 97 64 0 0 118 B3VZ63 C-x8-C-x5-C-x3-H type Zn-finger (Fragment) OS=Populus tremula PE=4 SV=1
148 : B3VZ67_POPTN 0.42 0.67 2 65 34 97 64 0 0 118 B3VZ67 C-x8-C-x5-C-x3-H type Zn-finger (Fragment) OS=Populus tremula PE=4 SV=1
149 : B3VZ77_POPTN 0.42 0.69 2 65 34 97 64 0 0 118 B3VZ77 C-x8-C-x5-C-x3-H type Zn-finger (Fragment) OS=Populus tremula PE=4 SV=1
150 : M3CIV4_SPHMS 0.42 0.64 2 67 29 95 67 1 1 136 M3CIV4 Uncharacterized protein (Fragment) OS=Sphaerulina musiva (strain SO2202) GN=SEPMUDRAFT_20925 PE=4 SV=1
151 : F4PHA0_DICFS 0.30 0.44 8 60 635 714 80 2 27 925 F4PHA0 CCCH-type zinc finger-containing protein OS=Dictyostelium fasciculatum (strain SH3) GN=DFA_03330 PE=4 SV=1
## ALIGNMENTS 1 - 70
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 56 A G 0 0 138 5 0
2 57 A S + 0 0 124 13 76
3 58 A S + 0 0 124 13 72
4 59 A G - 0 0 69 13 68
5 60 A S - 0 0 88 13 72
6 61 A S S S- 0 0 150 14 66
7 62 A G - 0 0 49 120 28 GGGGGGGGGGGGGG GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
8 63 A E > - 0 0 132 126 65 EEEEEEEEEEEEEE EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
9 64 A K T 3 S+ 0 0 67 129 44 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
10 65 A T T 3 + 0 0 62 130 79 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
11 66 A V S < S- 0 0 44 144 24 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
12 67 A V B -a 30 0A 9 152 6 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
13 68 A C > - 0 0 2 152 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
14 69 A K H > S+ 0 0 129 151 11 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
15 70 A H H >4>S+ 0 0 96 152 2 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
16 71 A W H >45S+ 0 0 88 152 3 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
17 72 A L H 3<5S+ 0 0 69 152 13 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
18 73 A R T <<5S- 0 0 196 152 2 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
19 74 A G T < 5S+ 0 0 60 152 12 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
20 75 A L < + 0 0 119 152 5 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
21 76 A C - 0 0 30 152 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
22 77 A K S S+ 0 0 192 152 21 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
23 78 A K > + 0 0 104 152 1 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
24 79 A G T 3 S+ 0 0 32 152 13 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
25 80 A D T 3 S+ 0 0 134 152 29 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
26 81 A Q S < S+ 0 0 132 152 69 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
27 82 A C S S- 0 0 9 152 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
28 83 A E S S+ 0 0 130 152 38 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
29 84 A F S S- 0 0 44 152 6 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
30 85 A L B -a 12 0A 28 152 16 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
31 86 A H + 0 0 37 152 0 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
32 87 A E S S- 0 0 97 152 39 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
33 88 A Y + 0 0 128 152 6 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
34 89 A D > - 0 0 47 152 23 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
35 90 A M T 4 S+ 0 0 101 152 40 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMM
36 91 A T T 4 S+ 0 0 94 152 67 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
37 92 A K T 4 S+ 0 0 85 152 31 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
38 93 A M S < S- 0 0 11 152 12 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMM
39 94 A P - 0 0 50 152 13 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
40 95 A E B -b 58 0B 76 152 49 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
41 96 A C > - 0 0 0 152 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
42 97 A Y H > S+ 0 0 135 151 53 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
43 98 A F H >>S+ 0 0 99 151 14 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
44 99 A Y H 45S+ 0 0 52 151 16 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
45 100 A S H <5S+ 0 0 56 152 32 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
46 101 A K H <5S+ 0 0 146 152 47 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
47 102 A F T <5S- 0 0 104 152 32 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
48 103 A G < + 0 0 19 152 13 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
49 104 A E + 0 0 156 151 56 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
50 105 A C - 0 0 29 152 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
51 106 A S + 0 0 127 152 59 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
52 107 A N - 0 0 90 152 28 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
53 108 A K S S+ 0 0 201 149 59 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
54 109 A E S S+ 0 0 175 150 14 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
55 110 A C - 0 0 25 152 6 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
56 111 A P S S+ 0 0 64 152 83 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
57 112 A F S S- 0 0 86 152 15 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
58 113 A L B -b 40 0B 40 152 32 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
59 114 A H + 0 0 74 152 4 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
60 115 A I - 0 0 68 152 35 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
61 116 A D > - 0 0 68 150 49 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
62 117 A P T 3 S+ 0 0 80 150 22 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
63 118 A E T 3 S+ 0 0 136 151 70 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
64 119 A S S < S+ 0 0 59 151 74 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
65 120 A K S S+ 0 0 116 151 38 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
66 121 A I - 0 0 65 147 69 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
67 122 A K S S+ 0 0 174 146 51 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
68 123 A D S S+ 0 0 156 143 33 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
69 124 A C S S- 0 0 37 143 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
70 125 A P S S+ 0 0 76 141 38 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
71 126 A W + 0 0 124 138 0 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
72 127 A S > - 0 0 36 1 0
73 128 A G T 4 S- 0 0 66 1 0
74 129 A P T 4 S+ 0 0 127 1 0
75 130 A S T 4 S+ 0 0 78 1 0
76 131 A S < 0 0 44 1 0
77 132 A G 0 0 124 1 0
## ALIGNMENTS 71 - 140
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....8....:....9....:....0....:....1....:....2....:....3....:....4
1 56 A G 0 0 138 5 0 G G G
2 57 A S + 0 0 124 13 76 H R R
3 58 A S + 0 0 124 13 72 P E D
4 59 A G - 0 0 69 13 68 R S S
5 60 A S - 0 0 88 13 72 H G G
6 61 A S S S- 0 0 150 14 66 S G S S
7 62 A G - 0 0 49 120 28 GGGGGGGGGGGGGGGGGGGGGGG GGGGGG GG G GGGG G G G K K
8 63 A E > - 0 0 132 126 65 EEEEEEEEDEEEDEDDEEEEEEE EEDEGE ED EE EEEEEE DD E E A M M
9 64 A K T 3 S+ 0 0 67 129 44 KKKKKKKKKKKQRKRRKKKKKKK KKKKKRK KK KK KNKKKK NN K K Q G G
10 65 A T T 3 + 0 0 62 130 79 TTTTTTTTTTTTTTTTTTMMMMM AMMMTTM EK MMALALLLM AA T T P S S
11 66 A V S < S- 0 0 44 144 24 VVVVVVVVVVVVIVIVVVVVVVVVVVVVVVVVVVVVVVVVVVVIVVVVIVII V VVVIVVA V V
12 67 A V B -a 30 0A 9 152 6 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVIVVVVVVVVVVVVVVVVVIVIVVVVIVIV
13 68 A C > - 0 0 2 152 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
14 69 A K H > S+ 0 0 129 151 11 KK.KKKKKKKKKKKKKKQKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
15 70 A H H >4>S+ 0 0 96 152 2 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
16 71 A W H >45S+ 0 0 88 152 3 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
17 72 A L H 3<5S+ 0 0 69 152 13 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
18 73 A R T <<5S- 0 0 196 152 2 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
19 74 A G T < 5S+ 0 0 60 152 12 GGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGSGGGGG
20 75 A L < + 0 0 119 152 5 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLQLLLLL
21 76 A C - 0 0 30 152 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
22 77 A K S S+ 0 0 192 152 21 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRRRRKKKKKKKKKKKKKKKKKKKKKK
23 78 A K > + 0 0 104 152 1 KKKKKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKKKKKK
24 79 A G T 3 S+ 0 0 32 152 13 GGGGGGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGNNGGGSGSSSSNGGGGGGGGGGGNGGGGGGGNG
25 80 A D T 3 S+ 0 0 134 152 29 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDEEEEDDRDDDDDDDIDDIIIDIDRKDKNDDNKEKE
26 81 A Q S < S+ 0 0 132 152 69 QQQQQQQQQQQQQQQQHQHHHHHHDHQHHQQQHQGHVKKQQQCVCCCCHKVVKKKQKPEKHKQGQSKQKQ
27 82 A C S S- 0 0 9 152 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
28 83 A E S S+ 0 0 130 152 38 EEEEEEEEEEEEEEEEKEKKKKKKEKEKKKRHRSEEEEEGGEDEDDDNEEEEEEEEEKEEEEEDEEEDED
29 84 A F S S- 0 0 44 152 6 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFYFFFFF
30 85 A L B -a 12 0A 28 152 16 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLMLLMMMLMLLILILLLLILIL
31 86 A H + 0 0 37 152 0 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
32 87 A E S S- 0 0 97 152 39 EEEEEEEEEQEEEEEEQKQQQQQQEQEQQQQQQQQEEEEQQEQVQQQQEEVVEEEEEQEEEEEDQEEEEE
33 88 A Y + 0 0 128 152 6 YYYYYYYYYYYYYYYYYYYYYYYYYYFYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYCYYYYYYYYYYYY
34 89 A D > - 0 0 47 152 23 DDDDDDDDDDDDDDDDDDDDDDDDDDNDDDDDDDKDNNNDDNDADDDDNDAADDDDDDDDNDNDDNDNDN
35 90 A M T 4 S+ 0 0 101 152 40 MMMMMMMMMMMVMMMMIIILLIILMLMLLALVVVAMMLLVVLVLVVVVLLLLLLLMLLLLLLLAMLLLLL
36 91 A T T 4 S+ 0 0 94 152 67 TTTTTTTTTTTTTSTTTTTTTTTTATRTTTSATTGSKKKTTKSDSSSSRSDDSSSTSTKKRKKTTRKKKK
37 92 A K T 4 S+ 0 0 85 152 31 KKKKKKKKKKKKKKKKKKRRRRRRKRKRRRRRRRKKRKKRRKKKKKKRKRKKRRRKRRRKKKKRRTKKKK
38 93 A M S < S- 0 0 11 152 12 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMRMMMMMMMMMMMM
39 94 A P - 0 0 50 152 13 PPPPPPPPPPPPPPPPPLPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
40 95 A E B -b 58 0B 76 152 49 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEREEEEEEKKEVEVVVVEEEEEEEEEEEQEQPELEQPQP
41 96 A C > - 0 0 0 152 0 CCCCCCCCCCYCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
42 97 A Y H > S+ 0 0 135 151 53 YYYYYYYYYYYYYYYYYYYYYYYYYYWYYYYYYYHYWWWYYWYWYYYYLYWWYYYYYCWFLFHYHWYHYH
43 98 A F H >>S+ 0 0 99 151 14 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
44 99 A Y H 45S+ 0 0 52 151 16 YYYYYYYYYYYYYYYYYYYYYYYYFYYYYFFYYHFFFFFYYFHFHHHHYFFFFFFYFYFYYYYYFFFYFY
45 100 A S H <5S+ 0 0 56 152 32 SSSSSTSSSSSSSSSASSSSSSSSSSSSSSSSSSSQASSSSSSSSSSSSSSSSSSSSSSSSSASAGSASA
46 101 A K H <5S+ 0 0 146 152 47 KKKKKKKKKKKKRKRRKKKKKKKKKKRKKKKKKKEKKKKKKKKKKKKKKSKKSSSKSTKKKKEKDKKEKE
47 102 A F T <5S- 0 0 104 152 32 FFFFYFYYFFFFFFFFFFFFFFFFFFYFFFFFFFYYLYYFFYFYFFFFNYYYYYYFYFYFNFRFGYLRLR
48 103 A G < + 0 0 19 152 13 GGGGGGGGGGGGNGNNGWGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGgGGGGGWGGQGGGGG
49 104 A E + 0 0 156 151 56 EEEEEEEEEEKEADAAEKDDDDDDRDEDDDEDDDEQEEEDDENENNNNFEEEEEEeEDEEYEWE.FEWEW
50 105 A C - 0 0 29 152 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
51 106 A S + 0 0 127 152 59 SSSSSSSSSSNSHNHHSSSSSSSSESSSSNSNHNSTTSSNNASSSSSNTMSSMMMSMSATTTSSTSTSTS
52 107 A N - 0 0 90 152 28 NNNNNNNNNNNNNNNNNGNNNNNNNNNNNNNNNNNNNNNKKNNNNNNNqNNNNNNNNSNNqNnNKnNnNn
53 108 A K S S+ 0 0 201 149 59 KKKKKKKKKKKRKRKKKKKKKKKKRKEKKKKKKKVTPITKKPKQKKKKpPQQPPPKP.NPpPeKDd.e.e
54 109 A E S S+ 0 0 175 150 14 EEEEEEEEEKEEEEEEEDEEEEEEDEDEEEEEEEEEEEEEEEEDEEEEEEDDEEEEEKEEEEEDDE.E.E
55 110 A C - 0 0 25 152 6 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCRCCCCCCCCPCPC
56 111 A P S S+ 0 0 64 152 83 PPPPPPPPQQPPPPPPLSPPPPPPQSMSSPYSTSIQQHHSSNLLLLLPLNLLNNNPNPYILILPQMELEL
57 112 A F S S- 0 0 86 152 15 FFFFFFFFYYFFFFFFFFFFFFFFYFYFFFFFFFFYYFFFFFFFFFFFYYFFYYYFYFFYYYYFFYCYCY
58 113 A L B -b 40 0B 40 152 32 LLLLLLLLLLLLLLLLLVLLLLLLLLLLLLLLLLLRLLLLLLLLLLLLLILLIIILILLLLLLLLLFLFL
59 114 A H + 0 0 74 152 4 HHHHHHHHHHYHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHYHYH
60 115 A I - 0 0 68 152 35 IIIIIIIIIIIIIIIIAMVVVVVVIVIVVVMVVVIIIIIVVILILLLLIIIIIIIIIVVVIVLAIVLLLL
61 116 A D > - 0 0 68 150 49 DDDDDDDDNDDDDDDDDDKKKKKKDKDKKKKKKKKDDDDKKDKDKKKKDDDDDDDDDKDNDNDHRDHDHD
62 117 A P T 3 S+ 0 0 80 150 22 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPTPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPGPESPSP
63 118 A E T 3 S+ 0 0 136 151 70 EEEDEEEEEQEAEAEEAEAAAAAANAEAAAAAAAEEDNNAANVNVVVVQNNNNNNENANDQDSTERVSVS
64 119 A S S < S+ 0 0 59 151 74 SSSSSSSSSSSSSSSSFSFFFFFFSFSFFFSSSFDTSSSFFSLSLLLPSSSSSSSSSLKKQKKADMVKDK
65 120 A K S S+ 0 0 116 151 38 KKKKKKKKKKKRKNKKKKKKKKKKKKKKKKEKKNRKKEEQQSKKKKKKKSKKSSSKSKAKKKQSKRKQKQ
66 121 A I - 0 0 65 147 69 IIIIIIIIIIIIIIILIISSSSSSVSISSTATSTIKISSTTSLSLLLLISSSSSSISNKTITVTVVRVRV
67 122 A K S S+ 0 0 174 146 51 KKKKKKKKKKKKKRKKRKQQQQQQKQKQQRQQQRKKRKKRRKQKQQQQPKKKKKKKKREKPKGVVLKGKG
68 123 A D S S+ 0 0 156 143 33 DDDDDDDDDDDDDDDDDDDDDDDDEDEDDDADDDTDEEEDDEDEDDDDAEEEEEEDED.EEEVGEEEVEV
69 124 A C S S- 0 0 37 143 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
70 125 A P S S+ 0 0 76 141 38 PPPPPPPPPPPPPPPPPPPPPPPPQPAPPPPPPPPPPLLPPLPIPPPPPPIIPPPPPPALSLAPP AAAA
71 126 A W + 0 0 124 138 0 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWW WWWWWWWWWWWWWWWWW WWWWWWWWWWW WWWW WWWW
72 127 A S > - 0 0 36 1 0
73 128 A G T 4 S- 0 0 66 1 0
74 129 A P T 4 S+ 0 0 127 1 0
75 130 A S T 4 S+ 0 0 78 1 0
76 131 A S < 0 0 44 1 0
77 132 A G 0 0 124 1 0
## ALIGNMENTS 141 - 151
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....5....:....6....:....7....:....8....:....9....:....0....:....1
1 56 A G 0 0 138 5 0 G
2 57 A S + 0 0 124 13 76 R PQHPQQQP
3 58 A S + 0 0 124 13 72 E SAASAAAS
4 59 A G - 0 0 69 13 68 S EGGEGGGE
5 60 A S - 0 0 88 13 72 G RRRRRRRR
6 61 A S S S- 0 0 150 14 66 S SRRSRRRS
7 62 A G - 0 0 49 120 28 K GSSGSSSG
8 63 A E > - 0 0 132 126 65 M IFFIFFFIE
9 64 A K T 3 S+ 0 0 67 129 44 GRGRRSRRRGK
10 65 A T T 3 + 0 0 62 130 79 STHQQNQQQHT
11 66 A V S < S- 0 0 44 144 24 VVLTTLTTTLV
12 67 A V B -a 30 0A 9 152 6 VVIVVIVVVIL
13 68 A C > - 0 0 2 152 0 CCCCCCCCCCC
14 69 A K H > S+ 0 0 129 151 11 KRKRRKRRRKN
15 70 A H H >4>S+ 0 0 96 152 2 HHHHHHHHHHY
16 71 A W H >45S+ 0 0 88 152 3 WWYWWYWWRYY
17 72 A L H 3<5S+ 0 0 69 152 13 LLQLLQLLLQK
18 73 A R T <<5S- 0 0 196 152 2 RRRRRRRRRRQ
19 74 A G T < 5S+ 0 0 60 152 12 GDGSSGSSSGG
20 75 A L < + 0 0 119 152 5 LLLLLLLLLLA
21 76 A C - 0 0 30 152 0 CCCCCCCCCCC
22 77 A K S S+ 0 0 192 152 21 KMKMMKMMMKT
23 78 A K > + 0 0 104 152 1 KKKKKKKKKKK
24 79 A G T 3 S+ 0 0 32 152 13 GGGGGGGGGGG
25 80 A D T 3 S+ 0 0 134 152 29 EADDDDDDDED
26 81 A Q S < S+ 0 0 132 152 69 QATAAAAAAAE
27 82 A C S S- 0 0 9 152 0 CCCCCCCCCCC
28 83 A E S S+ 0 0 130 152 38 DEEGGEGGGET
29 84 A F S S- 0 0 44 152 6 FFFFFFCCFFF
30 85 A L B -a 12 0A 28 152 16 LLALLALLLAI
31 86 A H + 0 0 37 152 0 HHHHHHHHHHH
32 87 A E S S- 0 0 97 152 39 EQTQQTQQQTE
33 88 A Y + 0 0 128 152 6 YYFYYFYYYFg
34 89 A D > - 0 0 47 152 23 NDNDDNDDDNh
35 90 A M T 4 S+ 0 0 101 152 40 LLLKKLKKKLD
36 91 A T T 4 S+ 0 0 94 152 67 KSRSSRSSSRK
37 92 A K T 4 S+ 0 0 85 152 31 KKDRRDRRRDK
38 93 A M S < S- 0 0 11 152 12 MMEMMEMMMEM
39 94 A P - 0 0 50 152 13 PPKPPRPPPKE
40 95 A E B -b 58 0B 76 152 49 PLEVVEVVVEL
41 96 A C > - 0 0 0 152 0 CCCCCCCCCCC
42 97 A Y H > S+ 0 0 135 151 53 H.KRRKRRRKK
43 98 A F H >>S+ 0 0 99 151 14 F.EFFEFFFEF
44 99 A Y H 45S+ 0 0 52 151 16 F.FFFFSFFFF
45 100 A S H <5S+ 0 0 56 152 32 ARSRRSRRRSK
46 101 A K H <5S+ 0 0 146 152 47 EHRLLRLLLRG
47 102 A F T <5S- 0 0 104 152 32 RGYYYYYYYYG
48 103 A G < + 0 0 19 152 13 GDGGGGGGGGs
49 104 A E + 0 0 156 151 56 WRIEEIEEEIg
50 105 A C - 0 0 29 152 0 CCCCCCCCCCC
51 106 A S + 0 0 127 152 59 SKSRRPRRRPT
52 107 A N - 0 0 90 152 28 nVqEEqEEEqN
53 108 A K S S+ 0 0 201 149 59 eKdQQeQQQdT
54 109 A E S S+ 0 0 175 150 14 EDDDDDDDDEE
55 110 A C - 0 0 25 152 6 CCCCCCCCCCC
56 111 A P S S+ 0 0 64 152 83 LPTVVTVVVTP
57 112 A F S S- 0 0 86 152 15 YFSYYYYYYSY
58 113 A L B -b 40 0B 40 152 32 LRLKKLKKKLG
59 114 A H + 0 0 74 152 4 HHHHHHHHHHH
60 115 A I - 0 0 68 152 35 LIITTITTTIF
61 116 A D > - 0 0 68 150 49 DNPN.PNNNP
62 117 A P T 3 S+ 0 0 80 150 22 PEPE.PEEEP
63 118 A E T 3 S+ 0 0 136 151 70 SATDNTDDDT
64 119 A S S < S+ 0 0 59 151 74 KDSIESIIIA
65 120 A K S S+ 0 0 116 151 38 QREKDRKKKE
66 121 A I - 0 0 65 147 69 VLL IL V
67 122 A K S S+ 0 0 174 146 51 G R KR R
68 123 A D S S+ 0 0 156 143 33 V ED
69 124 A C S S- 0 0 37 143 0 C C
70 125 A P S S+ 0 0 76 141 38 A
71 126 A W + 0 0 124 138 0 W
72 127 A S > - 0 0 36 1 0
73 128 A G T 4 S- 0 0 66 1 0
74 129 A P T 4 S+ 0 0 127 1 0
75 130 A S T 4 S+ 0 0 78 1 0
76 131 A S < 0 0 44 1 0
77 132 A G 0 0 124 1 0
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 56 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0.000 0 1.00
2 57 A 0 0 0 0 0 0 0 0 0 23 8 0 0 15 23 0 31 0 0 0 13 0 0 1.525 50 0.23
3 58 A 0 0 0 0 0 0 0 0 38 8 31 0 0 0 0 0 0 15 0 8 13 0 0 1.413 47 0.27
4 59 A 0 0 0 0 0 0 0 46 0 0 23 0 0 0 8 0 0 23 0 0 13 0 0 1.231 41 0.32
5 60 A 0 0 0 0 0 0 0 23 0 0 8 0 0 8 62 0 0 0 0 0 13 0 0 1.032 34 0.27
6 61 A 0 0 0 0 0 0 0 7 0 0 57 0 0 0 36 0 0 0 0 0 14 0 0 0.876 29 0.33
7 62 A 0 0 0 0 0 0 0 93 0 0 4 0 0 0 0 3 0 0 0 0 120 0 0 0.289 9 0.72
8 63 A 0 0 2 2 4 0 0 1 1 0 0 0 0 0 0 0 0 83 0 6 126 0 0 0.710 23 0.35
9 64 A 0 0 0 0 0 0 0 4 0 0 1 0 0 0 8 84 2 0 2 0 129 0 0 0.663 22 0.56
10 65 A 0 3 0 9 0 0 0 0 4 1 2 73 0 2 0 1 4 1 1 0 130 0 0 1.108 36 0.20
11 66 A 89 2 5 0 0 0 0 0 1 0 0 3 0 0 0 0 0 0 0 0 144 0 0 0.484 16 0.76
12 67 A 94 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 152 0 0 0.245 8 0.93
13 68 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 152 1 0 0.000 0 1.00
14 69 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 95 1 0 1 0 151 0 0 0.246 8 0.88
15 70 A 0 0 0 0 0 0 1 0 0 0 0 0 0 99 0 0 0 0 0 0 152 0 0 0.040 1 0.97
16 71 A 0 0 0 0 0 97 3 0 0 0 0 0 0 0 1 0 0 0 0 0 152 0 0 0.161 5 0.96
17 72 A 0 97 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 152 0 0 0.136 4 0.86
18 73 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 99 0 1 0 0 0 152 0 0 0.040 1 0.98
19 74 A 0 0 0 0 0 0 0 95 1 0 4 0 0 0 0 0 0 0 0 1 152 0 0 0.245 8 0.88
20 75 A 0 99 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 152 0 0 0.079 2 0.94
21 76 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 152 0 0 0.000 0 1.00
22 77 A 0 0 0 4 0 0 0 0 0 0 0 1 0 0 3 92 0 0 0 0 152 0 0 0.349 11 0.78
23 78 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 99 0 0 0 0 152 0 0 0.070 2 0.99
24 79 A 0 0 0 0 0 0 0 93 0 0 4 0 0 0 0 0 0 0 3 0 152 0 0 0.310 10 0.87
25 80 A 0 0 3 0 0 0 0 0 1 0 0 0 0 0 1 3 0 5 1 86 152 0 0 0.644 21 0.70
26 81 A 3 0 0 0 0 0 0 1 5 1 1 1 3 9 0 7 67 1 0 1 152 0 0 1.287 42 0.30
27 82 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 152 0 0 0.000 0 1.00
28 83 A 0 0 0 0 0 0 0 5 0 0 1 1 0 1 1 8 0 78 1 5 152 0 0 0.878 29 0.62
29 84 A 0 0 0 0 98 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 152 0 0 0.110 3 0.93
30 85 A 0 91 3 3 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 152 0 0 0.384 12 0.83
31 86 A 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 152 0 0 0.000 0 1.00
32 87 A 2 0 0 0 0 0 0 0 0 0 0 2 0 0 0 1 21 74 0 1 152 0 0 0.774 25 0.60
33 88 A 0 0 0 0 3 0 96 1 0 0 0 0 1 0 0 0 0 0 0 0 152 0 1 0.201 6 0.94
34 89 A 0 0 0 0 0 0 0 0 2 0 0 0 0 1 0 1 0 0 10 87 152 0 0 0.495 16 0.76
35 90 A 7 23 3 61 0 0 0 0 2 0 0 0 0 0 0 3 0 0 0 1 152 0 0 1.167 38 0.59
36 91 A 0 0 0 0 0 0 0 1 1 0 13 70 0 0 5 9 0 0 0 2 152 0 0 1.040 34 0.33
37 92 A 0 0 0 0 0 0 0 0 0 0 0 1 0 0 21 76 0 0 0 2 152 0 0 0.645 21 0.69
38 93 A 0 0 0 97 0 0 0 0 0 0 0 0 0 0 1 0 0 2 0 0 152 0 0 0.136 4 0.88
39 94 A 0 1 0 0 0 0 0 0 0 97 0 0 0 0 1 1 0 1 0 0 152 0 0 0.188 6 0.87
40 95 A 7 2 0 0 0 0 0 0 0 3 0 0 0 0 1 1 3 84 0 0 152 0 0 0.683 22 0.50
41 96 A 0 0 0 0 0 0 1 0 0 0 0 0 99 0 0 0 0 0 0 0 152 1 0 0.040 1 1.00
42 97 A 0 1 0 0 1 7 80 0 0 0 0 0 1 4 3 3 0 0 0 0 151 0 0 0.842 28 0.47
43 98 A 0 0 0 0 98 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 151 0 0 0.098 3 0.86
44 99 A 0 0 0 0 21 0 75 0 0 0 1 0 0 4 0 0 0 0 0 0 151 0 0 0.703 23 0.83
45 100 A 0 0 0 0 0 0 0 1 5 0 89 1 0 0 4 1 1 0 0 0 152 0 0 0.507 16 0.68
46 101 A 0 3 0 0 0 0 0 1 0 0 3 1 0 1 5 83 0 3 0 1 152 0 0 0.766 25 0.53
47 102 A 0 2 0 0 74 0 18 2 0 0 0 0 0 0 3 0 0 0 1 0 152 0 0 0.835 27 0.67
48 103 A 0 0 0 0 0 1 0 95 0 0 1 0 0 0 0 0 1 0 2 1 152 1 2 0.285 9 0.86
49 104 A 0 0 2 0 1 3 1 1 2 0 0 0 0 0 1 1 1 73 3 11 151 0 0 1.113 37 0.44
50 105 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 152 0 0 0.000 0 1.00
51 106 A 0 0 0 3 0 0 0 0 1 1 75 7 0 3 3 1 0 1 5 0 152 0 0 1.050 35 0.41
52 107 A 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 2 3 3 89 0 152 3 10 0.501 16 0.72
53 108 A 1 0 1 0 0 0 0 0 0 7 0 2 0 0 2 74 5 4 1 3 149 0 0 1.053 35 0.40
54 109 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 88 0 11 150 0 0 0.409 13 0.86
55 110 A 0 0 0 0 0 0 0 0 0 1 0 0 98 0 1 0 0 0 0 0 152 0 0 0.110 3 0.93
56 111 A 3 9 2 1 0 0 1 0 0 64 5 3 0 1 0 0 4 1 4 0 152 0 0 1.426 47 0.16
57 112 A 0 0 0 0 80 0 18 0 0 0 1 0 1 0 0 0 0 0 0 0 152 0 0 0.602 20 0.85
58 113 A 1 89 3 0 1 0 0 1 0 0 0 0 0 0 1 3 0 0 0 0 152 0 0 0.504 16 0.67
59 114 A 0 0 0 0 0 0 2 0 0 0 0 0 0 98 0 0 0 0 0 0 152 0 0 0.097 3 0.95
60 115 A 13 7 73 1 1 0 0 0 1 0 0 3 0 0 0 0 0 0 0 0 152 1 0 0.946 31 0.65
61 116 A 0 0 0 0 0 0 0 0 0 2 0 0 0 2 1 15 0 0 5 75 150 0 0 0.852 28 0.50
62 117 A 0 0 0 0 0 0 0 1 0 93 1 1 0 0 0 0 0 4 0 0 150 0 0 0.318 10 0.77
63 118 A 5 0 0 0 0 0 0 0 14 0 3 3 0 0 1 0 2 59 9 5 151 0 0 1.408 46 0.30
64 119 A 1 3 3 1 9 0 0 0 1 1 72 1 0 0 0 5 1 1 0 3 151 0 0 1.160 38 0.25
65 120 A 0 0 0 0 0 0 0 0 1 0 5 0 0 0 3 82 4 3 1 1 151 0 0 0.782 26 0.62
66 121 A 5 6 65 0 0 0 0 0 1 0 14 5 0 0 1 1 0 0 1 0 147 0 0 1.233 41 0.31
67 122 A 1 1 0 0 0 0 0 3 0 1 0 0 0 0 8 74 12 1 0 0 146 1 0 0.953 31 0.48
68 123 A 3 0 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 15 0 79 143 0 0 0.703 23 0.67
69 124 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 143 0 0 0.000 0 1.00
70 125 A 0 4 2 0 0 0 0 0 6 87 1 0 0 0 0 0 1 0 0 0 141 0 0 0.552 18 0.61
71 126 A 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 138 0 0 0.000 0 1.00
72 127 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
73 128 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
74 129 A 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
75 130 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
76 131 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
77 132 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
119 43 111 1 qTp
126 43 104 28 gWSILHFLFKSDRICTAGVVLMFCVCVAGe
131 43 48 1 qTp
133 43 95 1 nGe
136 42 49 1 nGd
138 53 94 1 nGe
140 53 94 1 nGe
141 53 94 1 nGe
143 52 80 1 qGd
146 52 77 1 qGe
150 52 80 1 qGd
151 27 661 2 gPVh
151 42 678 25 sCFKGTDCPFSHDPKVVACKYFNSPSg
//