Complet list of 2d9g hssp file
Complete list of 2d9g.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 2D9G
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-17
HEADER TRANSCRIPTION 09-DEC-05 2D9G
COMPND MOL_ID: 1; MOLECULE: YY1-ASSOCIATED FACTOR 2; CHAIN: A; FRAGMENT: ZF-R
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: HOMO SAPIENS; ORGANISM_COMMON: HUMAN;
AUTHOR H.P.ZHANG,K.IZUMI,M.YOSHIDA,F.HAYASHI,S.YOKOYAMA,RIKEN STRUCTURAL GENO
DBREF 2D9G A 8 47 UNP Q8IY57 YAF2_HUMAN 19 58
SEQLENGTH 53
NCHAIN 1 chain(s) in 2D9G data set
NALIGN 45
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : G7N6Q6_MACMU 1.00 1.00 8 47 1 40 40 0 0 162 G7N6Q6 YY1-associated factor 2 (Fragment) OS=Macaca mulatta GN=EGK_03534 PE=4 SV=1
2 : D2HHW2_AILME 0.98 1.00 6 47 1 42 42 0 0 164 D2HHW2 Uncharacterized protein (Fragment) OS=Ailuropoda melanoleuca GN=LOC100470018 PE=4 SV=1
3 : G3S2E4_GORGO 0.98 1.00 6 47 9 50 42 0 0 172 G3S2E4 Uncharacterized protein (Fragment) OS=Gorilla gorilla gorilla GN=101132624 PE=4 SV=1
4 : H0VSP8_CAVPO 0.98 1.00 6 47 9 50 42 0 0 172 H0VSP8 Uncharacterized protein (Fragment) OS=Cavia porcellus GN=YAF2 PE=4 SV=1
5 : H9F0Y2_MACMU 0.98 1.00 6 47 17 58 42 0 0 95 H9F0Y2 YY1-associated factor 2 isoform 2 (Fragment) OS=Macaca mulatta GN=YAF2 PE=2 SV=1
6 : F7B493_MONDO 0.95 1.00 5 47 16 58 43 0 0 180 F7B493 Uncharacterized protein OS=Monodelphis domestica GN=YAF2 PE=4 SV=2
7 : F7G8M9_CALJA 0.95 1.00 5 47 16 58 43 0 0 180 F7G8M9 Uncharacterized protein OS=Callithrix jacchus GN=YAF2 PE=2 SV=1
8 : F7HRL7_MACMU 0.95 1.00 5 47 16 58 43 0 0 180 F7HRL7 Uncharacterized protein OS=Macaca mulatta GN=YAF2 PE=2 SV=1
9 : G1KBM8_ANOCA 0.95 1.00 5 47 16 58 43 0 0 180 G1KBM8 Uncharacterized protein OS=Anolis carolinensis GN=YAF2 PE=4 SV=1
10 : G1S8G2_NOMLE 0.95 1.00 5 47 16 58 43 0 0 180 G1S8G2 Uncharacterized protein OS=Nomascus leucogenys GN=YAF2 PE=4 SV=1
11 : G3VYJ3_SARHA 0.95 1.00 5 47 16 58 43 0 0 180 G3VYJ3 Uncharacterized protein OS=Sarcophilus harrisii GN=YAF2 PE=4 SV=1
12 : H3AB92_LATCH 0.95 1.00 5 47 16 58 43 0 0 180 H3AB92 Uncharacterized protein OS=Latimeria chalumnae GN=YAF2 PE=4 SV=2
13 : I7GL03_MACFA 0.95 1.00 5 47 16 58 43 0 0 180 I7GL03 Macaca fascicularis brain cDNA clone: QflA-16477, similar to human YY1 associated factor 2 (YAF2), mRNA, RefSeq: NM_005748.2 OS=Macaca fascicularis PE=2 SV=1
14 : K7D4Z1_PANTR 0.95 1.00 5 47 16 58 43 0 0 180 K7D4Z1 YY1 associated factor 2 OS=Pan troglodytes GN=YAF2 PE=2 SV=1
15 : K9IGV0_DESRO 0.95 1.00 5 47 16 58 43 0 0 180 K9IGV0 Putative ring1 interactor rybp OS=Desmodus rotundus PE=2 SV=1
16 : L5KAT7_PTEAL 0.95 1.00 5 47 16 58 43 0 0 180 L5KAT7 YY1-associated factor 2 OS=Pteropus alecto GN=PAL_GLEAN10010054 PE=4 SV=1
17 : Q0VC56_BOVIN 0.95 1.00 5 47 16 58 43 0 0 180 Q0VC56 YY1 associated factor 2 OS=Bos taurus GN=YAF2 PE=2 SV=1
18 : Q5ZKC5_CHICK 0.95 1.00 5 47 16 58 43 0 0 180 Q5ZKC5 Uncharacterized protein OS=Gallus gallus GN=YAF2 PE=2 SV=1
19 : V9LGS1_CALMI 0.95 0.95 6 47 17 58 42 0 0 149 V9LGS1 YY1-associated factor 2 (Fragment) OS=Callorhynchus milii PE=2 SV=1
20 : W5LZL2_LEPOC 0.95 1.00 5 47 16 58 43 0 0 180 W5LZL2 Uncharacterized protein OS=Lepisosteus oculatus PE=4 SV=1
21 : YAF2_HUMAN 2D9G 0.95 1.00 5 47 16 58 43 0 0 180 Q8IY57 YY1-associated factor 2 OS=Homo sapiens GN=YAF2 PE=1 SV=3
22 : I3JQ01_ORENI 0.93 0.98 5 47 17 59 43 0 0 182 I3JQ01 Uncharacterized protein OS=Oreochromis niloticus GN=LOC100706913 PE=4 SV=1
23 : Q6GPC1_XENLA 0.93 1.00 6 47 17 58 42 0 0 81 Q6GPC1 LOC443631 protein (Fragment) OS=Xenopus laevis GN=LOC443631 PE=2 SV=1
24 : H2V196_TAKRU 0.88 1.00 6 47 16 57 42 0 0 156 H2V196 Uncharacterized protein OS=Takifugu rubripes GN=LOC101073451 PE=4 SV=1
25 : H3DEY3_TETNG 0.88 1.00 6 47 18 59 42 0 0 158 H3DEY3 Uncharacterized protein OS=Tetraodon nigroviridis PE=4 SV=1
26 : Q4RSH3_TETNG 0.88 1.00 6 47 16 57 42 0 0 156 Q4RSH3 Chromosome 13 SCAF15000, whole genome shotgun sequence OS=Tetraodon nigroviridis GN=GSTENG00029695001 PE=4 SV=1
27 : C1BTU5_LEPSM 0.77 0.86 4 47 12 55 44 0 0 251 C1BTU5 RING1 and YY1-binding protein OS=Lepeophtheirus salmonis GN=RYBP PE=2 SV=1
28 : N6TD25_DENPD 0.77 0.93 8 47 19 58 40 0 0 151 N6TD25 Uncharacterized protein (Fragment) OS=Dendroctonus ponderosae GN=YQE_05390 PE=4 SV=1
29 : G5AU64_HETGA 0.76 0.88 6 47 13 54 42 0 0 118 G5AU64 YY1-associated factor 2 OS=Heterocephalus glaber GN=GW7_09334 PE=4 SV=1
30 : B7PIZ5_IXOSC 0.75 0.90 8 47 17 56 40 0 0 136 B7PIZ5 Putative uncharacterized protein OS=Ixodes scapularis GN=IscW_ISCW017896 PE=4 SV=1
31 : V5I1D6_IXORI 0.75 0.90 8 47 17 56 40 0 0 136 V5I1D6 Putative yy1 associated factor 2 OS=Ixodes ricinus PE=2 SV=1
32 : L7M3R2_9ACAR 0.74 0.88 5 47 17 59 43 0 0 148 L7M3R2 Putative yy1-associated factor 2 OS=Rhipicephalus pulchellus PE=2 SV=1
33 : T1FVH5_HELRO 0.73 0.84 1 44 6 49 44 0 0 358 T1FVH5 Uncharacterized protein OS=Helobdella robusta GN=HELRODRAFT_193935 PE=4 SV=1
34 : E9HC83_DAPPU 0.71 0.81 3 50 13 60 48 0 0 172 E9HC83 Putative uncharacterized protein OS=Daphnia pulex GN=DAPPUDRAFT_112486 PE=4 SV=1
35 : W5JSL3_ANODA 0.70 0.77 5 43 15 58 44 1 5 151 W5JSL3 Uncharacterized protein OS=Anopheles darlingi GN=AND_000832 PE=4 SV=1
36 : B3RV00_TRIAD 0.67 0.91 5 47 7 49 43 0 0 120 B3RV00 Putative uncharacterized protein (Fragment) OS=Trichoplax adhaerens GN=TRIADDRAFT_7760 PE=4 SV=1
37 : V9L444_CALMI 0.67 0.84 5 53 35 83 49 0 0 229 V9L444 YY1-associated factor 2 (Fragment) OS=Callorhynchus milii PE=2 SV=1
38 : V9LA14_CALMI 0.67 0.84 5 53 16 64 49 0 0 210 V9LA14 YY1-associated factor 2 OS=Callorhynchus milii PE=2 SV=1
39 : T1K272_TETUR 0.64 0.87 1 47 46 92 47 0 0 305 T1K272 Uncharacterized protein OS=Tetranychus urticae PE=4 SV=1
40 : U6JGM5_ECHGR 0.61 0.86 4 47 21 64 44 0 0 409 U6JGM5 Ring and YY1 binding protein OS=Echinococcus granulosus GN=EgrG_000113300 PE=4 SV=1
41 : W6URY0_ECHGR 0.61 0.86 4 47 14 57 44 0 0 402 W6URY0 YY1-associated factor OS=Echinococcus granulosus GN=EGR_04130 PE=4 SV=1
42 : H2KPE3_CLOSI 0.48 0.78 3 48 53 98 46 0 0 590 H2KPE3 RING1 and YY1-binding protein OS=Clonorchis sinensis GN=CLF_101824 PE=4 SV=1
43 : Q4TAK7_TETNG 0.44 0.59 9 49 3 43 41 0 0 78 Q4TAK7 Chromosome undetermined SCAF7301, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00004158001 PE=4 SV=1
44 : W5MRF9_LEPOC 0.41 0.57 2 43 150 193 44 1 2 890 W5MRF9 Uncharacterized protein OS=Lepisosteus oculatus GN=CAPN15 PE=4 SV=1
45 : H3FVQ2_PRIPA 0.40 0.68 4 53 16 63 50 1 2 126 H3FVQ2 Uncharacterized protein OS=Pristionchus pacificus GN=WBGene00115939 PE=4 SV=1
## ALIGNMENTS 1 - 45
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A G 0 0 136 3 38 G D
2 2 A S - 0 0 132 4 79 K G A
3 3 A S + 0 0 132 6 66 RS A K S
4 4 A G - 0 0 72 10 73 T MS NAAA PG
5 5 A S - 0 0 91 31 69 PPPPPPPPPPPPP PPP S PKKSSPPSTTR SD
6 6 A S S S- 0 0 131 41 51 SSSSSSSSSSSSSSSSSSSSSSPPPK S SPQKSSSGGGG SA
7 7 A G S S- 0 0 52 41 72 SSSSSSSSSSSSSSSSSTSSPSASSG S KVIVSTTEGGE PD
8 8 A D - 0 0 140 45 19 DDDDDDDDDDDDDDDDDDDDDDDDDDDEDEEEDEEEDDDEEE DE
9 9 A E + 0 0 165 46 39 EEEEEEEEEEEEEEEEEEEEEDEDDDEDADDEDEEDEEDEEDEFG
10 10 A G - 0 0 46 46 53 GGGGGGGGGGGGGGGGGGGGGGGGGGNNGNNQGNNSGGNEEDGST
11 11 A Y - 0 0 140 46 66 YYYYYYYYYYYYYYYYYYYYYYYYYYYFYVVVLYFYYYTFFRMTA
12 12 A W E -A 21 0A 42 46 0 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
13 13 A D E -A 20 0A 108 46 21 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDESSD
14 14 A C - 0 0 10 46 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
15 15 A S S S+ 0 0 105 46 37 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSSTTTSIST
16 16 A V S S+ 0 0 93 46 26 VVVVVVVVVVVVVVVVVVVVVVVVVVVVAVVVVVVVVVVVVVFKV
17 17 A C S S- 0 0 28 46 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
18 18 A T + 0 0 113 46 11 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTLTT
19 19 A F - 0 0 85 46 16 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFYYYYYFYFFFYYYVLF
20 20 A R E -A 13 0A 162 46 26 RRRRRRRRRRRRRRRRRRRRRRKKKKRRWRRRKRRRRRKKKMRRK
21 21 A N E -A 12 0A 5 46 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
22 22 A S - 0 0 74 46 66 SSSSSSSSSSSSSSSSSSSSSSSSSSNTITTTSNTISSPSSPQPK
23 23 A A S S+ 0 0 45 46 25 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAAAASATS
24 24 A E S S+ 0 0 166 46 21 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEETEEEEEESGE
25 25 A A - 0 0 32 46 6 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAASAAA
26 26 A F S S+ 0 0 172 46 13 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFYFTF
27 27 A K S S- 0 0 64 46 11 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRRKRKK
28 28 A C - 0 0 8 46 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
29 29 A M S S+ 0 0 131 46 79 MMMMMMMMMMMMMMMMMMSMMMLLLLSLLLLLASSLSSLEEEISE
30 30 A M S S+ 0 0 117 46 32 MMMMMMMMMMMMMMMMMMMMMMMMMMMMRMMMMMMMMMMMMIVAI
31 31 A C S S- 0 0 41 46 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
32 32 A D + 0 0 89 46 32 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDQQFQGD
33 33 A V - 0 0 49 46 44 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVTTMAST
34 34 A R - 0 0 149 46 28 RRRRRRRRRRRRRRRRRRRRRRRRRRRRWRRRRRrRRRRRRRPsS
35 35 A K + 0 0 100 45 29 KKKKKKKKKKKKKKKKKKKKKKKKKKKKQKKKKKpKKKKKKKHh.
36 36 A G - 0 0 25 45 10 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGQG.
37 37 A T - 0 0 123 46 26 TTTTTTTTTTTTTTTTTTTTTTTTTTTTITTTTTTTTTTTTTTFI
38 38 A S + 0 0 93 46 11 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSQS
39 39 A T - 0 0 118 46 20 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTDH
40 40 A R - 0 0 193 46 27 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRLPK
41 41 A K - 0 0 160 46 24 KKKKKKKKKKKKKKKKKKKKKKKKKKRKKKKKKKKKPPKKKKKNR
42 42 A P S S+ 0 0 125 46 28 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPSSPPPPIPK
43 43 A R - 0 0 178 46 35 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRKRRRQQRKKRMRT
44 44 A P - 0 0 120 44 91 PPPPPPPPPPPPPPPPPPPPPPPPPPIIPIILPL VGGILLLF Q
45 45 A V + 0 0 123 43 89 VVVVVVVVVVVVVVVVVVVVVVVVVVNNVNNN N SKKNNNNP L
46 46 A S - 0 0 109 43 54 SSSSSSSSSSSSSSSSSSSSSSSSSSAPSPPA P APPPRRPS S
47 47 A Q - 0 0 155 43 37 QQQQQQQQQQQQQQQQQQQQQQQQQQDQQQQQ Q EPPEQQQK G
48 48 A S + 0 0 101 7 85 L VV VN G
49 49 A G - 0 0 50 6 57 V SS G S
50 50 A P - 0 0 118 5 71 P II P
51 51 A S S S+ 0 0 135 4 61 TT S
52 52 A S 0 0 94 4 83 TT N
53 53 A G 0 0 126 4 30 SS S
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 67 0 0 0 0 0 0 0 0 0 0 0 33 3 0 0 0.637 21 0.62
2 2 A 0 0 0 0 0 0 0 25 25 0 25 0 0 0 0 25 0 0 0 0 4 0 0 1.386 46 0.21
3 3 A 0 0 0 0 0 0 0 0 17 0 50 0 0 0 17 17 0 0 0 0 6 0 0 1.242 41 0.33
4 4 A 0 0 0 10 0 0 0 20 30 10 10 10 0 0 0 0 0 0 10 0 10 0 0 1.834 61 0.27
5 5 A 0 0 0 0 0 0 0 0 0 61 19 6 0 0 3 6 0 0 0 3 31 0 0 1.193 39 0.31
6 6 A 0 0 0 0 0 0 0 10 2 10 71 0 0 0 0 5 2 0 0 0 41 0 0 1.028 34 0.48
7 7 A 5 0 2 0 0 0 0 10 2 5 59 7 0 0 0 2 0 5 0 2 41 0 0 1.536 51 0.28
8 8 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0 76 45 0 0 0.556 18 0.81
9 9 A 0 0 0 0 2 0 0 2 2 0 0 0 0 0 0 0 0 70 0 24 46 0 0 0.844 28 0.60
10 10 A 0 0 0 0 0 0 0 70 0 0 4 2 0 0 0 0 2 4 15 2 46 0 0 1.061 35 0.47
11 11 A 7 2 0 2 9 0 72 0 2 0 0 4 0 0 2 0 0 0 0 0 46 0 0 1.098 36 0.33
12 12 A 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46 0 0 0.000 0 1.00
13 13 A 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 2 0 93 46 0 0 0.283 9 0.79
14 14 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 46 0 0 0.000 0 1.00
15 15 A 0 0 2 0 0 0 0 0 0 0 87 11 0 0 0 0 0 0 0 0 46 0 0 0.446 14 0.62
16 16 A 93 0 0 0 2 0 0 0 2 0 0 0 0 0 0 2 0 0 0 0 46 0 0 0.313 10 0.74
17 17 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 46 0 0 0.000 0 1.00
18 18 A 0 2 0 0 0 0 0 0 0 0 0 98 0 0 0 0 0 0 0 0 46 0 0 0.105 3 0.88
19 19 A 2 2 0 0 76 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 46 0 0 0.694 23 0.84
20 20 A 0 0 0 2 0 2 0 0 0 0 0 0 0 0 76 20 0 0 0 0 46 0 0 0.694 23 0.73
21 21 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 46 0 0 0.000 0 1.00
22 22 A 0 0 4 0 0 0 0 0 0 7 70 11 0 0 0 2 2 0 4 0 46 0 0 1.111 37 0.33
23 23 A 0 0 0 0 0 0 0 0 91 0 4 4 0 0 0 0 0 0 0 0 46 0 0 0.356 11 0.74
24 24 A 0 0 0 0 0 0 0 2 0 0 2 2 0 0 0 0 0 93 0 0 46 0 0 0.313 10 0.78
25 25 A 0 0 0 0 0 0 0 0 98 0 2 0 0 0 0 0 0 0 0 0 46 0 0 0.105 3 0.94
26 26 A 0 0 0 0 96 0 2 0 0 0 0 2 0 0 0 0 0 0 0 0 46 0 0 0.209 6 0.86
27 27 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 93 0 0 0 0 46 0 0 0.241 8 0.89
28 28 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 46 0 0 0.000 0 1.00
29 29 A 0 24 2 48 0 0 0 0 2 0 15 0 0 0 0 0 0 9 0 0 46 0 0 1.360 45 0.21
30 30 A 2 0 4 89 0 0 0 0 2 0 0 0 0 0 2 0 0 0 0 0 46 0 0 0.489 16 0.68
31 31 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 46 0 0 0.000 0 1.00
32 32 A 0 0 0 0 2 0 0 2 0 0 0 0 0 0 0 0 7 0 0 89 46 0 0 0.447 14 0.67
33 33 A 87 0 0 2 0 0 0 0 2 0 2 7 0 0 0 0 0 0 0 0 46 0 0 0.549 18 0.55
34 34 A 0 0 0 0 0 2 0 0 0 2 4 0 0 0 91 0 0 0 0 0 46 1 2 0.386 12 0.72
35 35 A 0 0 0 0 0 0 0 0 0 2 0 0 0 4 0 91 2 0 0 0 45 0 0 0.392 13 0.70
36 36 A 0 0 0 0 0 0 0 98 0 0 0 0 0 0 0 0 2 0 0 0 45 0 0 0.107 3 0.90
37 37 A 0 0 4 0 2 0 0 0 0 0 0 93 0 0 0 0 0 0 0 0 46 0 0 0.283 9 0.74
38 38 A 0 0 0 0 0 0 0 0 0 0 98 0 0 0 0 0 2 0 0 0 46 0 0 0.105 3 0.88
39 39 A 0 0 0 0 0 0 0 0 0 0 0 96 0 2 0 0 0 0 0 2 46 0 0 0.209 6 0.79
40 40 A 0 2 0 0 0 0 0 0 0 2 0 0 0 0 93 2 0 0 0 0 46 0 0 0.313 10 0.73
41 41 A 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 89 0 0 2 0 46 0 0 0.458 15 0.76
42 42 A 0 0 2 0 0 0 0 0 0 91 4 0 0 0 0 2 0 0 0 0 46 0 0 0.386 12 0.71
43 43 A 0 0 0 2 0 0 0 0 0 0 0 2 0 0 85 7 4 0 0 0 46 0 0 0.621 20 0.65
44 44 A 2 11 11 0 2 0 0 5 0 66 0 0 0 0 0 0 2 0 0 0 44 0 0 1.168 38 0.09
45 45 A 65 2 0 0 0 0 0 0 0 2 2 0 0 0 0 5 0 0 23 0 43 0 0 1.024 34 0.10
46 46 A 0 0 0 0 0 0 0 0 7 19 70 0 0 0 5 0 0 0 0 0 43 0 0 0.893 29 0.45
47 47 A 0 0 0 0 0 0 0 2 0 5 0 0 0 0 0 2 84 5 0 2 43 0 0 0.697 23 0.63
48 48 A 43 14 0 0 0 0 0 14 0 0 14 0 0 0 0 0 0 0 14 0 7 0 0 1.475 49 0.14
49 49 A 17 0 0 0 0 0 0 33 0 0 50 0 0 0 0 0 0 0 0 0 6 0 0 1.011 33 0.43
50 50 A 0 0 40 0 0 0 0 0 0 60 0 0 0 0 0 0 0 0 0 0 5 0 0 0.673 22 0.28
51 51 A 0 0 0 0 0 0 0 0 0 0 50 50 0 0 0 0 0 0 0 0 4 0 0 0.693 23 0.39
52 52 A 0 0 0 0 0 0 0 0 0 0 25 50 0 0 0 0 0 0 25 0 4 0 0 1.040 34 0.17
53 53 A 0 0 0 0 0 0 0 25 0 0 75 0 0 0 0 0 0 0 0 0 4 0 0 0.562 18 0.70
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
35 31 45 5 rKVYSVp
44 34 183 2 sKLh
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