Complet list of 2d8c hssp file
Complete list of 2d8c.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 2D8C
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-17
HEADER TRANSFERASE 02-DEC-05 2D8C
COMPND MOL_ID: 1; MOLECULE: PHOSPHATIDYLCHOLINE:CERAMIDE CHOLINEPHOSPHOTRANSF
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: MUS MUSCULUS; ORGANISM_COMMON: HOUSE M
AUTHOR A.K.GORONCY,T.KIGAWA,S.KOSHIBA,T.TOMIZAWA,N.KOBAYASHI, N.TOCHIO,M.INOU
DBREF 2D8C A 8 91 UNP Q8VCQ6 SMS1_MOUSE 1 84
SEQLENGTH 97
NCHAIN 1 chain(s) in 2D8C data set
NALIGN 91
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : E3W996_MOUSE 0.94 0.99 8 96 1 89 89 0 0 220 E3W996 Phosphatidylcholine:ceramide cholinephosphotransferase 1 OS=Mus musculus GN=Sgms1 PE=2 SV=1
2 : SMS1_MOUSE 2D8C 0.94 0.99 8 96 1 89 89 0 0 419 Q8VCQ6 Phosphatidylcholine:ceramide cholinephosphotransferase 1 OS=Mus musculus GN=Sgms1 PE=1 SV=2
3 : L8Y5F6_TUPCH 0.93 0.98 14 96 1 83 83 0 0 360 L8Y5F6 Phosphatidylcholine:ceramide cholinephosphotransferase 1 OS=Tupaia chinensis GN=TREES_T100011330 PE=4 SV=1
4 : C0MHM2_HUMAN 0.92 0.98 14 96 1 83 83 0 0 241 C0MHM2 Sphingomyelin synthase 1 OS=Homo sapiens GN=SGMS1 PE=2 SV=1
5 : D3DWC4_HUMAN 0.92 0.98 14 96 1 83 83 0 0 413 D3DWC4 Phosphatidylcholine:ceramide cholinephosphotransferase 1 OS=Homo sapiens GN=TMEM23 PE=4 SV=1
6 : E6ZCI6_HUMAN 0.92 0.98 14 96 1 83 83 0 0 219 E6ZCI6 Sphingomyelin synthase 1 OS=Homo sapiens GN=SGMS1 PE=2 SV=1
7 : E6ZCI7_HUMAN 0.92 0.98 14 96 1 83 83 0 0 222 E6ZCI7 Sphingomyelin synthase 1 (Fragment) OS=Homo sapiens GN=SGMS1 PE=2 SV=1
8 : G2HGH6_PANTR 0.92 0.98 14 96 1 83 83 0 0 413 G2HGH6 Phosphatidylcholine:ceramide cholinephosphotransferase 1 OS=Pan troglodytes PE=2 SV=1
9 : G7N2G5_MACMU 0.92 0.98 14 96 1 83 83 0 0 354 G7N2G5 Putative uncharacterized protein (Fragment) OS=Macaca mulatta GN=EGK_19857 PE=4 SV=1
10 : G7PDG5_MACFA 0.92 0.98 14 96 1 83 83 0 0 355 G7PDG5 Putative uncharacterized protein OS=Macaca fascicularis GN=EGM_18168 PE=4 SV=1
11 : H2NAX3_PONAB 0.92 0.98 14 96 1 83 83 0 0 413 H2NAX3 Uncharacterized protein OS=Pongo abelii GN=SGMS1 PE=4 SV=2
12 : H9FSM1_MACMU 0.92 0.98 14 96 1 83 83 0 0 413 H9FSM1 Phosphatidylcholine:ceramide cholinephosphotransferase 1 OS=Macaca mulatta GN=SGMS1 PE=2 SV=1
13 : SMS1_HUMAN 0.91 0.97 8 96 1 89 89 0 0 419 Q86VZ5 Phosphatidylcholine:ceramide cholinephosphotransferase 1 OS=Homo sapiens GN=SGMS1 PE=1 SV=2
14 : F6SP53_CALJA 0.90 0.98 14 96 1 83 83 0 0 241 F6SP53 Uncharacterized protein OS=Callithrix jacchus GN=SGMS1 PE=4 SV=1
15 : F7D565_CALJA 0.90 0.98 14 96 1 83 83 0 0 413 F7D565 Phosphatidylcholine:ceramide cholinephosphotransferase 1 OS=Callithrix jacchus GN=SGMS1 PE=2 SV=1
16 : F7ESE6_MACMU 0.90 0.97 8 96 1 89 89 0 0 419 F7ESE6 Uncharacterized protein (Fragment) OS=Macaca mulatta GN=SGMS1 PE=4 SV=1
17 : G1RN69_NOMLE 0.90 0.97 8 96 1 89 89 0 0 419 G1RN69 Uncharacterized protein (Fragment) OS=Nomascus leucogenys GN=SGMS1 PE=4 SV=1
18 : G3HW69_CRIGR 0.90 0.96 14 96 1 83 83 0 0 414 G3HW69 Phosphatidylcholine:ceramide cholinephosphotransferase 1 OS=Cricetulus griseus GN=I79_015219 PE=4 SV=1
19 : G3QTK8_GORGO 0.90 0.97 8 96 1 89 89 0 0 419 G3QTK8 Uncharacterized protein (Fragment) OS=Gorilla gorilla gorilla GN=101138874 PE=4 SV=1
20 : H2Q1W8_PANTR 0.90 0.98 14 96 1 83 83 0 0 413 H2Q1W8 Sphingomyelin synthase 1 OS=Pan troglodytes GN=SGMS1 PE=2 SV=1
21 : I3LY69_SPETR 0.90 0.96 8 96 1 89 89 0 0 419 I3LY69 Uncharacterized protein OS=Spermophilus tridecemlineatus GN=SGMS1 PE=4 SV=1
22 : F1SCZ8_PIG 0.89 0.96 8 96 1 89 89 0 0 420 F1SCZ8 Phosphatidylcholine:ceramide cholinephosphotransferase 1 (Fragment) OS=Sus scrofa GN=SGMS1 PE=4 SV=2
23 : F7CZI4_HORSE 0.89 0.96 8 96 1 89 89 0 0 419 F7CZI4 Uncharacterized protein OS=Equus caballus GN=SGMS1 PE=4 SV=1
24 : G5CAC8_HETGA 0.89 0.94 14 96 1 83 83 0 0 412 G5CAC8 Phosphatidylcholine:ceramide cholinephosphotransferase 1 OS=Heterocephalus glaber GN=GW7_12759 PE=4 SV=1
25 : K9KDY7_HORSE 0.89 0.96 8 96 1 89 89 0 0 214 K9KDY7 Phosphatidylcholine:ceramide cholinephosphotransferase 1-like protein (Fragment) OS=Equus caballus PE=2 SV=1
26 : Q6AZ82_RAT 0.89 0.94 8 96 1 89 89 0 0 220 Q6AZ82 Sgms1 protein OS=Rattus norvegicus GN=Sgms1 PE=2 SV=1
27 : S9WYG4_9CETA 0.89 0.96 14 96 1 83 83 0 0 439 S9WYG4 Phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform 1 OS=Camelus ferus GN=CB1_000564002 PE=4 SV=1
28 : SMS1_PIG 0.89 0.95 9 96 1 88 88 0 0 418 A0AAS4 Phosphatidylcholine:ceramide cholinephosphotransferase 1 OS=Sus scrofa GN=SGMS1 PE=2 SV=2
29 : SMS1_RAT 0.89 0.94 8 96 1 89 89 0 0 419 Q7TSX5 Phosphatidylcholine:ceramide cholinephosphotransferase 1 OS=Rattus norvegicus GN=Sgms1 PE=2 SV=2
30 : H0XPJ1_OTOGA 0.88 0.96 8 96 1 89 89 0 0 419 H0XPJ1 Uncharacterized protein (Fragment) OS=Otolemur garnettii GN=SGMS1 PE=4 SV=1
31 : L5MEJ1_MYODS 0.88 0.95 14 96 1 83 83 0 0 1344 L5MEJ1 Neutral ceramidase OS=Myotis davidii GN=MDA_GLEAN10010242 PE=4 SV=1
32 : S7N9M6_MYOBR 0.88 0.95 14 96 1 83 83 0 0 413 S7N9M6 Phosphatidylcholine:ceramide cholinephosphotransferase 1 OS=Myotis brandtii GN=D623_10028819 PE=4 SV=1
33 : G1PSW0_MYOLU 0.87 0.94 8 96 1 89 89 0 0 419 G1PSW0 Uncharacterized protein (Fragment) OS=Myotis lucifugus GN=SGMS1 PE=4 SV=1
34 : G3UAK6_LOXAF 0.87 0.96 8 96 1 89 89 0 0 220 G3UAK6 Uncharacterized protein OS=Loxodonta africana GN=SGMS1 PE=4 SV=1
35 : G3ULW4_LOXAF 0.87 0.96 8 96 1 89 89 0 0 419 G3ULW4 Uncharacterized protein OS=Loxodonta africana GN=SGMS1 PE=4 SV=1
36 : L5JQD1_PTEAL 0.87 0.95 14 96 1 83 83 0 0 413 L5JQD1 Phosphatidylcholine:ceramide cholinephosphotransferase 1 OS=Pteropus alecto GN=PAL_GLEAN10018404 PE=4 SV=1
37 : G1T0D0_RABIT 0.85 0.94 8 96 1 89 89 0 0 419 G1T0D0 Uncharacterized protein OS=Oryctolagus cuniculus GN=SGMS1 PE=4 SV=1
38 : H0VSA8_CAVPO 0.85 0.93 8 96 1 89 89 0 0 419 H0VSA8 Uncharacterized protein (Fragment) OS=Cavia porcellus GN=SGMS1 PE=4 SV=1
39 : K9J2N0_DESRO 0.85 0.93 9 96 1 88 88 0 0 418 K9J2N0 Putative conserved plasma membrane protein (Fragment) OS=Desmodus rotundus PE=2 SV=1
40 : F7F828_ORNAN 0.84 0.95 11 96 4 89 86 0 0 220 F7F828 Uncharacterized protein (Fragment) OS=Ornithorhynchus anatinus GN=SGMS1 PE=4 SV=1
41 : F1MF31_BOVIN 0.83 0.92 9 96 2 89 88 0 0 419 F1MF31 Uncharacterized protein (Fragment) OS=Bos taurus GN=SGMS1 PE=4 SV=1
42 : L8HSY8_9CETA 0.83 0.92 9 96 2 89 88 0 0 419 L8HSY8 Phosphatidylcholine:ceramide cholinephosphotransferase 1 (Fragment) OS=Bos mutus GN=M91_16473 PE=4 SV=1
43 : W5PWZ6_SHEEP 0.82 0.92 9 96 2 89 88 0 0 419 W5PWZ6 Uncharacterized protein (Fragment) OS=Ovis aries GN=SGMS1 PE=4 SV=1
44 : G9KNI3_MUSPF 0.81 0.95 14 96 1 83 83 0 0 409 G9KNI3 Sphingomyelin synthase 1 (Fragment) OS=Mustela putorius furo PE=2 SV=1
45 : H9GM28_ANOCA 0.80 0.93 14 96 1 83 83 0 0 413 H9GM28 Uncharacterized protein OS=Anolis carolinensis GN=SGMS1 PE=4 SV=2
46 : U6D164_NEOVI 0.80 0.94 11 96 4 89 86 0 0 415 U6D164 Phosphatidylcholine:ceramide cholinephosphotransferase 1 (Fragment) OS=Neovison vison GN=SMS1 PE=2 SV=1
47 : D2GZ30_AILME 0.79 0.93 11 96 1 86 86 0 0 416 D2GZ30 Putative uncharacterized protein (Fragment) OS=Ailuropoda melanoleuca GN=PANDA_002312 PE=4 SV=1
48 : M3YZW1_MUSPF 0.79 0.94 10 96 2 88 87 0 0 414 M3YZW1 Uncharacterized protein (Fragment) OS=Mustela putorius furo GN=SGMS1 PE=4 SV=1
49 : F1PN18_CANFA 0.78 0.94 14 96 1 83 83 0 0 413 F1PN18 Uncharacterized protein OS=Canis familiaris GN=SGMS1 PE=4 SV=2
50 : F6YPY0_MONDO 0.78 0.93 9 96 2 89 88 0 0 412 F6YPY0 Uncharacterized protein (Fragment) OS=Monodelphis domestica GN=SGMS1 PE=4 SV=1
51 : G1L163_AILME 0.78 0.93 10 96 2 88 87 0 0 418 G1L163 Uncharacterized protein (Fragment) OS=Ailuropoda melanoleuca GN=SGMS1 PE=4 SV=1
52 : M3WLS7_FELCA 0.77 0.93 14 96 1 83 83 0 0 407 M3WLS7 Uncharacterized protein OS=Felis catus GN=SGMS1 PE=4 SV=1
53 : K7FSR2_PELSI 0.74 0.87 8 96 1 89 89 0 0 418 K7FSR2 Uncharacterized protein OS=Pelodiscus sinensis GN=SGMS1 PE=4 SV=1
54 : M7AHZ7_CHEMY 0.74 0.89 8 96 1 89 89 0 0 416 M7AHZ7 Phosphatidylcholine:ceramide cholinephosphotransferase 1 OS=Chelonia mydas GN=UY3_18326 PE=4 SV=1
55 : F1DS94_CHICK 0.73 0.88 14 96 1 83 83 0 0 413 F1DS94 Sphingomyelin synthase 1 OS=Gallus gallus PE=2 SV=1
56 : G1MRZ0_MELGA 0.73 0.88 14 96 6 88 83 0 0 418 G1MRZ0 Uncharacterized protein (Fragment) OS=Meleagris gallopavo GN=SGMS1 PE=4 SV=1
57 : J3S4V3_CROAD 0.72 0.89 14 96 1 83 83 0 0 413 J3S4V3 Phosphatidylcholine:ceramide cholinephosphotransferase 1-like OS=Crotalus adamanteus PE=2 SV=1
58 : T1E5K0_CROHD 0.72 0.89 14 96 1 83 83 0 0 413 T1E5K0 Phosphatidylcholine:ceramide cholinephosphotransferase 1-like protein OS=Crotalus horridus PE=2 SV=1
59 : F1NRU9_CHICK 0.71 0.86 11 96 2 87 86 0 0 417 F1NRU9 Phosphatidylcholine:ceramide cholinephosphotransferase 1 (Fragment) OS=Gallus gallus GN=SGMS1 PE=4 SV=2
60 : R0LBB4_ANAPL 0.71 0.85 11 96 2 87 86 0 0 417 R0LBB4 Phosphatidylcholine:ceramide cholinephosphotransferase 1 (Fragment) OS=Anas platyrhynchos GN=Anapl_05350 PE=4 SV=1
61 : SMS1_CHICK 0.71 0.86 11 96 2 87 86 0 0 417 Q7T3T4 Phosphatidylcholine:ceramide cholinephosphotransferase 1 OS=Gallus gallus GN=SGMS1 PE=2 SV=2
62 : U3F765_MICFL 0.71 0.89 14 96 1 83 83 0 0 413 U3F765 Phosphatidylcholine:ceramide cholinephosphotransferase 1 OS=Micrurus fulvius PE=2 SV=1
63 : V8NGW0_OPHHA 0.71 0.89 14 96 1 83 83 0 0 208 V8NGW0 Phosphatidylcholine:ceramide cholinephosphotransferase 1 OS=Ophiophagus hannah GN=SGMS1 PE=4 SV=1
64 : H0Z3R3_TAEGU 0.69 0.87 11 96 2 87 86 0 0 415 H0Z3R3 Uncharacterized protein (Fragment) OS=Taeniopygia guttata GN=SGMS1 PE=4 SV=1
65 : U3I3V3_ANAPL 0.69 0.83 8 96 1 89 89 0 0 419 U3I3V3 Uncharacterized protein (Fragment) OS=Anas platyrhynchos GN=SGMS1 PE=4 SV=1
66 : U3KFB0_FICAL 0.69 0.87 11 96 2 87 86 0 0 413 U3KFB0 Uncharacterized protein (Fragment) OS=Ficedula albicollis GN=SGMS1 PE=4 SV=1
67 : H3APA5_LATCH 0.58 0.84 14 96 1 83 83 0 0 412 H3APA5 Uncharacterized protein OS=Latimeria chalumnae PE=4 SV=1
68 : Q6NTY1_XENLA 0.55 0.82 14 96 1 83 83 0 0 412 Q6NTY1 MGC81436 protein OS=Xenopus laevis GN=sgms1 PE=2 SV=1
69 : W5MGQ1_LEPOC 0.54 0.81 18 96 16 94 79 0 0 417 W5MGQ1 Uncharacterized protein (Fragment) OS=Lepisosteus oculatus PE=4 SV=1
70 : F6UTK5_XENTR 0.53 0.81 14 96 7 89 83 0 0 359 F6UTK5 Uncharacterized protein (Fragment) OS=Xenopus tropicalis GN=sgms1 PE=4 SV=1
71 : Q640R5_XENTR 0.53 0.81 14 96 1 83 83 0 0 412 Q640R5 MGC89556 protein OS=Xenopus tropicalis GN=sgms1 PE=2 SV=1
72 : H2LPA3_ORYLA 0.51 0.75 14 96 1 83 83 0 0 405 H2LPA3 Uncharacterized protein OS=Oryzias latipes GN=LOC101173002 PE=4 SV=1
73 : W5LKG6_ASTMX 0.51 0.77 14 96 1 83 83 0 0 205 W5LKG6 Uncharacterized protein OS=Astyanax mexicanus PE=4 SV=1
74 : A0JMN0_DANRE 0.50 0.71 14 93 1 80 80 0 0 404 A0JMN0 Uncharacterized protein OS=Danio rerio GN=sgms1 PE=2 SV=1
75 : E9QDV6_DANRE 0.50 0.71 14 93 1 80 80 0 0 113 E9QDV6 Uncharacterized protein OS=Danio rerio GN=sgms1 PE=4 SV=1
76 : V9KJV0_CALMI 0.50 0.82 14 96 1 84 84 1 1 409 V9KJV0 Phosphatidylcholine:ceramide cholinephosphotransferase 1 OS=Callorhynchus milii PE=2 SV=1
77 : I3IV35_ORENI 0.49 0.77 14 96 7 89 83 0 0 412 I3IV35 Uncharacterized protein (Fragment) OS=Oreochromis niloticus GN=SGMS1 PE=4 SV=1
78 : H2LPA2_ORYLA 0.48 0.74 9 96 2 89 88 0 0 411 H2LPA2 Uncharacterized protein (Fragment) OS=Oryzias latipes GN=LOC101173002 PE=4 SV=1
79 : M4AEW3_XIPMA 0.48 0.70 14 96 1 83 83 0 0 409 M4AEW3 Uncharacterized protein OS=Xiphophorus maculatus GN=SGMS1 PE=4 SV=1
80 : G3P3D7_GASAC 0.46 0.72 14 96 7 89 83 0 0 411 G3P3D7 Uncharacterized protein (Fragment) OS=Gasterosteus aculeatus GN=SGMS1 PE=4 SV=1
81 : W5LH04_ASTMX 0.46 0.77 14 97 1 84 84 0 0 421 W5LH04 Uncharacterized protein OS=Astyanax mexicanus GN=SGMS1 (1 of 2) PE=4 SV=1
82 : W5U9M2_ICTPU 0.46 0.73 14 97 1 84 84 0 0 406 W5U9M2 Phosphatidylcholine:ceramide cholinephosphotransferase 1 OS=Ictalurus punctatus GN=SGMS1 PE=2 SV=1
83 : H2TNP8_TAKRU 0.44 0.67 9 96 2 89 88 0 0 414 H2TNP8 Uncharacterized protein (Fragment) OS=Takifugu rubripes GN=LOC101061029 PE=4 SV=1
84 : A8KBN3_DANRE 0.43 0.70 14 97 1 84 84 0 0 419 A8KBN3 Zgc:91976 protein OS=Danio rerio GN=zgc:91976 PE=2 SV=1
85 : Q4SL73_TETNG 0.43 0.72 14 96 1 82 83 1 1 403 Q4SL73 Chromosome 17 SCAF14563, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00016385001 PE=4 SV=1
86 : Q5U3Z9_DANRE 0.43 0.70 14 97 1 84 84 0 0 419 Q5U3Z9 Uncharacterized protein OS=Danio rerio GN=zgc:91976 PE=2 SV=1
87 : H3CT74_TETNG 0.41 0.70 14 96 7 88 83 1 1 410 H3CT74 Uncharacterized protein (Fragment) OS=Tetraodon nigroviridis GN=SGMS1 PE=4 SV=1
88 : A4QNV5_DANRE 0.32 0.56 20 94 12 89 78 2 3 412 A4QNV5 Uncharacterized protein OS=Danio rerio GN=zgc:162183 PE=2 SV=1
89 : V3ZKH9_LOTGI 0.32 0.55 14 84 1 74 74 2 3 392 V3ZKH9 Uncharacterized protein OS=Lottia gigantea GN=LOTGIDRAFT_221916 PE=4 SV=1
90 : C3YL71_BRAFL 0.31 0.57 14 85 1 75 75 2 3 401 C3YL71 Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_288304 PE=4 SV=1
91 : H0Z881_TAEGU 0.31 0.53 20 97 12 92 81 2 3 414 H0Z881 Uncharacterized protein OS=Taeniopygia guttata GN=SAMD8 PE=4 SV=1
## ALIGNMENTS 1 - 70
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A G 0 0 141 1 0
2 2 A S + 0 0 126 1 0
3 3 A S + 0 0 99 1 0
4 4 A G S S+ 0 0 80 1 0
5 5 A S S S- 0 0 116 1 0
6 6 A S - 0 0 64 1 0
7 7 A G S S+ 0 0 85 1 0
8 8 A M - 0 0 174 22 9 MM M LL L MVM MM ML LMM ML MM L
9 9 A L + 0 0 99 30 51 LL L LL L SLL LL MLL LLL SLL LLL L HH Q
10 10 A S - 0 0 103 32 66 SS S SS S SSS SS SSS SSS SSS SSS P PP LL L
11 11 A A - 0 0 46 40 53 AA A AA A AAA AA AAA AAA AAAAAAA AAA AA PP SSS PSP
12 12 A R S S- 0 0 241 40 55 RR S SS S SSS SS SSN SSS SSSSSSS GGG GG DD GGG GGG
13 13 A T - 0 0 59 40 61 TT T TT T TTT TT TTT TTT TTTTTTT TTT TT EE RER EES
14 14 A M + 0 0 38 89 0 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMM M
15 15 A K S S+ 0 0 101 89 30 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKN N
16 16 A E + 0 0 68 89 38 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEQ Q
17 17 A V + 0 0 0 89 3 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV V
18 18 A V S S+ 0 0 5 90 68 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVAVVVVVVVVAVEVAAAAVVEEVLVEEVLVTIVI
19 19 A Y S S+ 0 0 170 90 93 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYLYYYYYYHLFSSLLSLSLLLLLYFSS
20 20 A W - 0 0 26 92 0 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
21 21 A S > - 0 0 62 92 18 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
22 22 A P T 4 S+ 0 0 51 92 56 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPRRPPPRRPPPAPAP
23 23 A K T > S+ 0 0 148 92 59 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKQKKKEEEKKKKKKQKRIKEEKKEEEKKEEEGKAD
24 24 A K H > S+ 0 0 63 92 59 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKQKKQKKKKKEKKKKTKKEEEEEEEEEEEEEEEEEQ
25 25 A V H X S+ 0 0 0 92 0 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
26 26 A A H >> S+ 0 0 15 92 58 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTTAAAAAATAAAAAAAAAAAAAATTAATTTAATTALASA
27 27 A D H 3X S+ 0 0 112 92 49 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDNNNNDDNNNDDGNGANHN
28 28 A W H 3X S+ 0 0 13 92 0 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
29 29 A L H X<>S+ 0 0 0 92 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
30 30 A L H ><5S+ 0 0 72 92 87 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLMQQQLMLLLLLLLMMMMLLMTMLMTTTISTT
31 31 A E H 3<5S+ 0 0 65 92 30 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEDEEEE
32 32 A N T <<5S- 0 0 67 92 54 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNHNSNNNNHNHHHHNHHNNNNNNNNNNNNNNQRER
33 33 A A T < 5S+ 0 0 71 92 34 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGG
34 34 A M > < + 0 0 2 92 26 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMVMMMMMMMVVVVVVVVVVVVVVMLML
35 35 A P T 3> + 0 0 78 92 44 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPQQQ
36 36 A E T 34 S+ 0 0 69 92 6 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
37 37 A Y T <> S+ 0 0 0 92 0 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
38 38 A C T 4 S+ 0 0 33 92 56 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSS
39 39 A E T >< S+ 0 0 149 92 22 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDED
40 40 A P T 34 S+ 0 0 14 92 53 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPSTHT
41 41 A L T >< S+ 0 0 0 92 23 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLFL
42 42 A E T < S+ 0 0 99 92 69 EEEEEEEEEEEEEEEEEEEEEEEEEGEEGEEEEEEKGEEEEEEEEEEEEGEEGEKKKKKKKKKKKRQKRK
43 43 A H T 3 S+ 0 0 143 92 61 HHHHHHHHHHHHHHHHHHHHHHRHRHHHHHHHHHHHHHHHHHRHRHHHHQHHCFSSHHSSSHHNSSNSHS
44 44 A F < - 0 0 34 92 55 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFLFFFFFFFFFFFFFCFFFYFFLLFFFLLFFFLLLL
45 45 A T >> - 0 0 46 92 62 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTSSTTTSSTTTNSNS
46 46 A G H 3> S+ 0 0 0 92 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
47 47 A Q H 3> S+ 0 0 65 92 70 QQQQQQQQQQQQQQQQQRQRQRRQRQRRQRRRRRRQRQRQRRRRQRRRRRRRQQQQHHQQQRHRQRNQQK
48 48 A D H <4 S+ 0 0 80 92 53 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDEDDDDDDDDDDDDDDDDDDDDDDDDDDDDAGAA
49 49 A L H >< S+ 0 0 0 92 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
50 50 A I H 3< S+ 0 0 5 92 30 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIILLLL
51 51 A N T 3< S+ 0 0 88 92 70 NNNNNNNNNNNNNNNNNNNNNNNTNNNNNNNNNNNNNNNDNNNGNGGGGSGGNNNNNNNNNKNNNNKMQM
52 52 A L < - 0 0 6 92 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
53 53 A T >> - 0 0 61 92 36 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTSTTTTTTTTTTTTTTTTTTTTTTTTTTSKTK
54 54 A Q H >> S+ 0 0 102 92 62 QQQQQQQQQQQQQQQQQQQQRQQQQQQQQQQQQRRQQPLPQQQRKRRRRQRRKKEEKKEEEKKEEEEVEE
55 55 A E H >> S+ 0 0 127 92 59 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEEEEEEAAEEEAAEEEDDED
56 56 A D H <4 S+ 0 0 48 92 0 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
57 57 A F H << S+ 0 0 14 92 3 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
58 58 A K H << S+ 0 0 149 92 65 KKKKKKKKKKKKKKKKKTKKKTTTTTTTTTTTTKKTRTTKTTTTETATARATKKKKEEKKKEERKKKKRK
59 59 A K S < S- 0 0 105 92 51 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRNRRRRQRRKKKKKKKKKKKKKRSKKK
60 60 A P S S+ 0 0 103 91 40 PPPPPPPPPPPPPAAPPPPPPPPPPPPPPPPPPTTAPPPPPPPPPPPPPPPPPPTTPPTTTPPSTSPPPP
61 61 A P S S+ 0 0 76 92 7 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
62 62 A L S S+ 0 0 2 92 6 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLFL
63 63 A Y S S- 0 0 125 92 56 YYCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCSCCCCSCCSSSSSSSSSSSSSCSSSS
64 64 A R S S+ 0 0 200 92 63 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRLLLRRRRRRRRRRRRRRRRRRRRRRRLLLR
65 65 A V + 0 0 40 92 24 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVLVVVVVVVVVVVVVVVVVVVVVVVVV
66 66 A S S > S- 0 0 24 91 48 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTTTTSSSSSSSSSSSSSTTSSSTTSSSSSTS
67 67 A S T 3 S+ 0 0 127 92 42 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSASAAAASAASSSSSSSSSSSSSSSSSS
68 68 A D T > S- 0 0 61 92 9 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
69 69 A N T < S- 0 0 101 92 54 NNNNNNNNNNNNNNNNNNNNNNNNNNSNNNNNNSSNNNNNNNNSNSSSSNSSNSSSSSSSSSSSSSNNNN
70 70 A G T 3> S+ 0 0 3 92 20 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
71 71 A Q H <> + 0 0 85 92 44 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQRRRRR
72 72 A R H > S+ 0 0 142 92 48 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRQQQQQRQQQRRRQHQH
73 73 A L H > S+ 0 0 0 92 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
74 74 A L H X S+ 0 0 28 92 20 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
75 75 A D H X S+ 0 0 92 92 53 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDHHHDYDDDDDDDDYHHDDHHHDDNHNDEDE
76 76 A M H < S+ 0 0 47 92 60 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMLMMMMMMMMMMMMMMMMMKMRM
77 77 A I H >X S+ 0 0 1 92 12 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIILIIIIIIIIIIIIIIIII
78 78 A E H 3X S+ 0 0 114 92 19 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
79 79 A T H 3X S+ 0 0 47 92 28 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTTTI
80 80 A L H <> S+ 0 0 0 92 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
81 81 A K H >< S+ 0 0 51 92 27 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
82 82 A M H 3< S+ 0 0 129 92 52 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMVMVVVVMVVMMMMIIMMMIIMMMIIII
83 83 A E H 3< S+ 0 0 63 92 29 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAEEAAAEEAAAEEEE
84 84 A H S << S- 0 0 43 92 48 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHQHHHHHQHQQQQHQQHHHHHHHHHHHHHHHHHH
85 85 A H + 0 0 173 91 15 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
86 86 A M - 0 0 86 90 39 MMMLLLLLLLLLLLLLLMLLMMMMMIMMIMMMMLLMMMMILLLMIMMMMLMMIIIIIIIIIIIMIMIIII
87 87 A E - 0 0 196 90 25 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
88 88 A A - 0 0 82 90 40 AAAAAAAAAAAAAAAAAAAAAAAVAAAAAAVVVAAAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAEVE
89 89 A H - 0 0 178 90 3 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
90 90 A K + 0 0 169 90 18 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
91 91 A N - 0 0 135 90 15 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
92 92 A S + 0 0 114 90 12 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
93 93 A G - 0 0 58 90 36 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
94 94 A P - 0 0 116 88 33 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAVVAAVIVAAAIAAAAA
95 95 A S S S+ 0 0 136 87 20 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
96 96 A S 0 0 109 87 16 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
97 97 A G 0 0 128 6 38
## ALIGNMENTS 71 - 91
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....8....:....9....:....0....:....1....:....2....:....3....:....4
1 1 A G 0 0 141 1 0
2 2 A S + 0 0 126 1 0
3 3 A S + 0 0 99 1 0
4 4 A G S S+ 0 0 80 1 0
5 5 A S S S- 0 0 116 1 0
6 6 A S - 0 0 64 1 0
7 7 A G S S+ 0 0 85 1 0
8 8 A M - 0 0 174 22 9
9 9 A L + 0 0 99 30 51 F F
10 10 A S - 0 0 103 32 66 P P
11 11 A A - 0 0 46 40 53 P L
12 12 A R S S- 0 0 241 40 55 G A
13 13 A T - 0 0 59 40 61 K K
14 14 A M + 0 0 38 89 0 MMMMMMMMMMMMMMMMM MM
15 15 A K S S+ 0 0 101 89 30 NKKNNMRKKKKKKKKKK CC
16 16 A E + 0 0 68 89 38 QKKKKEKKKKEEKEKEK SD
17 17 A V + 0 0 0 89 3 VVAVVVVVVVVVVVVVV VV
18 18 A V S S+ 0 0 5 90 68 IVGAAGVVAAGGARTRT KH
19 19 A Y S S+ 0 0 170 90 93 SEQAAKAEASLRQLQLQ ST
20 20 A W - 0 0 26 92 0 WWWWWWWWWWWWWWWWWWWWW
21 21 A S > - 0 0 62 92 18 SSSSSSTSSTSSSTSTSSSKT
22 22 A P T 4 S+ 0 0 51 92 56 PPKEESAPTAVATATATSCCT
23 23 A K T > S+ 0 0 148 92 59 DEEDDKEEEEEARSRSRKDQK
24 24 A K H > S+ 0 0 63 92 59 QDQEEEDDDDEEDDDDDQDRN
25 25 A V H X S+ 0 0 0 92 0 VVVVVVIVVVVVVVVVVVVVV
26 26 A A H >> S+ 0 0 15 92 58 AFSSSLSFFSSSSSSSSAGGA
27 27 A D H 3X S+ 0 0 112 92 49 NELLLAQEDDEDDDDDDVNKR
28 28 A W H 3X S+ 0 0 13 92 0 WWWWWWWWWWWWWWWWWWWWW
29 29 A L H X<>S+ 0 0 0 92 0 LLLLLLLLLLLLLLLLLLLLL
30 30 A L H ><5S+ 0 0 72 92 87 TSATTTSSSSVANSNSNRKKK
31 31 A E H 3<5S+ 0 0 65 92 30 EKEDDEKKKKDEREREREERE
32 32 A N T <<5S- 0 0 67 92 54 REEQQHEEEEQEEEEEEQNAE
33 33 A A T < 5S+ 0 0 71 92 34 GGGGGGGGGGGGGGGGGGGGG
34 34 A M > < + 0 0 2 92 26 LMMLLMMMMMMMMMMMMFLFF
35 35 A P T 3> + 0 0 78 92 44 QPQQQQPPPPTPSQSQSREPC
36 36 A E T 34 S+ 0 0 69 92 6 EEEEEEEEEEEEEEDEDEDQE
37 37 A Y T <> S+ 0 0 0 92 0 YYYYYYYYYYYYYYYYYYYYY
38 38 A C T 4 S+ 0 0 33 92 56 SAVSSSIATVSSVTVTVVVVV
39 39 A E T >< S+ 0 0 149 92 22 DDEEEDDDHDEDDEDEDdpqd
40 40 A P T 34 S+ 0 0 14 92 53 TAPAAAAAAAAATAAAAcctc
41 41 A L T >< S+ 0 0 0 92 23 LLLLLFLLLLLLLLLLLSEQN
42 42 A E T < S+ 0 0 99 92 69 KKQRRHQKRRRRSWRRRKQER
43 43 A H T 3 S+ 0 0 143 92 61 SQQKKnQQQQNNLEQEQhhhh
44 44 A F < - 0 0 34 92 55 LTAYYlMTTRVVVKVKVlvil
45 45 A T >> - 0 0 46 92 62 SDDDDNNDDDDDDDDDDDDDD
46 46 A G H 3> S+ 0 0 0 92 0 GGGGGGGGGGGGGGGGGGGGG
47 47 A Q H 3> S+ 0 0 65 92 70 KPQLLHPPPPRTPPPPPPPMI
48 48 A D H <4 S+ 0 0 80 92 53 AAAAADAAAAASAAAAASAAT
49 49 A L H >< S+ 0 0 0 92 0 LLLLLLLLLLLLLLLLLLLLL
50 50 A I H 3< S+ 0 0 5 92 30 LLLLLLLLLLLLLLLLLLLLL
51 51 A N T 3< S+ 0 0 88 92 70 MRRNNKRRRRQRGQSQSCAST
52 52 A L < - 0 0 6 92 0 LLLLLLLLLLLLLLLLLLLLL
53 53 A T >> - 0 0 61 92 36 KTSTTSTTTNSSNSNSNTTTT
54 54 A Q H >> S+ 0 0 102 92 62 EDQTTQEDKEEESEGEGEEEE
55 55 A E H >> S+ 0 0 127 92 59 DTAEEQATAASSLQVQVKDMY
56 56 A D H <4 S+ 0 0 48 92 0 DDDDDDDDDDDDDDDDDDDDD
57 57 A F H << S+ 0 0 14 92 3 FFFFFFFFFFFFFFFFFLLLL
58 58 A K H << S+ 0 0 149 92 65 KQQKKQQQKQRQQNQNQRKRR
59 59 A K S < S- 0 0 105 92 51 KDKRRRKDVMSNTTKTKSNSS
60 60 A P S S+ 0 0 103 91 40 PPPTTLPPPPPPALFL.PPPP
61 61 A P S S+ 0 0 76 92 7 PPPPPPPPPPPPPPSPFPPPP
62 62 A L S S+ 0 0 2 92 6 LLLLLLLLLILLLLLLSLLLL
63 63 A Y S S- 0 0 125 92 56 SSSSSSSSSSSCSSASLENEE
64 64 A R S S+ 0 0 200 92 63 RRRRRHLRRLRLLLLLALILI
65 65 A V + 0 0 40 92 24 VVIVVIVVVVVVVVVVLKQKK
66 66 A S S > S- 0 0 24 91 48 SSSTTASSSSTTST.TVVVVV
67 67 A S T 3 S+ 0 0 127 92 42 SSPSSSSSPSGGSGSGSLLLL
68 68 A D T > S- 0 0 61 92 9 DDDDDDDDDDDDDDDDDGGGG
69 69 A N T < S- 0 0 101 92 54 NGSGGNCGGGNNGSSSSDHDD
70 70 A G T 3> S+ 0 0 3 92 20 GGGGGGGGGGGGGGGGGIVII
71 71 A Q H <> + 0 0 85 92 44 RLKRRQQLEQHRQRQRQKKKK
72 72 A R H > S+ 0 0 142 92 48 HQQLLQQQRQQRQQQQQRKRR
73 73 A L H > S+ 0 0 0 92 0 LLLLLLLLLLLLLLLLLLLLL
74 74 A L H X S+ 0 0 28 92 20 LLLLLLLLLLLLLLQLQSSMM
75 75 A D H X S+ 0 0 92 92 53 EEEEEEEEEEEEEEEEELLLL
76 76 A M H < S+ 0 0 47 92 60 MRKKKKRRRRRRRRRRRAKAS
77 77 A I H >X S+ 0 0 1 92 12 ILIIIILLMLVLIIIIIILII
78 78 A E H 3X S+ 0 0 114 92 19 EEKEEEEEEEEEEEEEERGRR
79 79 A T H 3X S+ 0 0 47 92 28 ITTTTTTTITTTTTTTTRHKK
80 80 A L H <> S+ 0 0 0 92 0 LLLLLLLLLLLLLLLLLLLLL
81 81 A K H >< S+ 0 0 51 92 27 KRNKKKKRRRRRRRRRRQKQQ
82 82 A M H 3< S+ 0 0 129 92 52 IIIIIILIIIIIIFIFIKERK
83 83 A E H 3< S+ 0 0 63 92 29 EEEEEEEEEEAAETETEHEEQ
84 84 A H S << S- 0 0 43 92 48 HNHHHHTNTTNNMSNSNYDNH
85 85 A H + 0 0 173 91 15 HHHHHHHHHHHHNHHHHT QV
86 86 A M - 0 0 86 90 39 IIIMMIMIIIMMMMMMMT D
87 87 A E - 0 0 196 90 25 EEENNEEEEEEGEKEKEL V
88 88 A A - 0 0 82 90 40 EAAGGAAADAVNAATATT L
89 89 A H - 0 0 178 90 3 HHHHHHHHHHHHHHHHHH E
90 90 A K + 0 0 169 90 18 KKKTTKKKKKKGKKKKKS E
91 91 A N - 0 0 135 90 15 NNNNNNNNNNNNNGNGND L
92 92 A S + 0 0 114 90 12 GGGGGGGGGGGNGNGNGS G
93 93 A G - 0 0 58 90 36 HHFHHHHHHHKRNNINIS Y
94 94 A P - 0 0 116 88 33 AAA AAAAAHHAHAHAA T
95 95 A S S S+ 0 0 136 87 20 NNN NNNNNGVNKNKN S
96 96 A S 0 0 109 87 16 GGG GGGGGSNGNGNG D
97 97 A G 0 0 128 6 38 SG S S G
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
2 2 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
3 3 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
4 4 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
5 5 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
6 6 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
7 7 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
8 8 A 5 32 0 64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0.792 26 0.90
9 9 A 0 73 0 3 7 0 0 0 0 0 7 0 0 7 0 0 3 0 0 0 30 0 0 0.996 33 0.48
10 10 A 0 9 0 0 0 0 0 0 0 16 75 0 0 0 0 0 0 0 0 0 32 0 0 0.728 24 0.33
11 11 A 0 3 0 0 0 0 0 0 75 13 10 0 0 0 0 0 0 0 0 0 40 0 0 0.798 26 0.47
12 12 A 0 0 0 0 0 0 0 30 3 0 52 0 0 0 8 0 0 0 3 5 40 0 0 1.228 40 0.44
13 13 A 0 0 0 0 0 0 0 0 0 0 3 75 0 0 5 5 0 13 0 0 40 0 0 0.867 28 0.38
14 14 A 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 89 0 0 0.000 0 1.00
15 15 A 0 0 0 1 0 0 0 0 0 0 0 0 2 0 1 90 0 0 6 0 89 0 0 0.444 14 0.70
16 16 A 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 12 3 82 0 1 89 0 0 0.636 21 0.61
17 17 A 99 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 89 0 0 0.062 2 0.97
18 18 A 64 2 3 0 0 0 0 4 12 0 0 3 0 1 2 1 0 6 0 0 90 0 0 1.335 44 0.32
19 19 A 0 14 0 0 2 0 58 0 4 0 10 1 0 1 1 1 4 2 0 0 90 0 0 1.473 49 0.06
20 20 A 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 92 0 0 0.000 0 1.00
21 21 A 0 0 0 0 0 0 0 0 0 0 93 5 0 0 0 1 0 0 0 0 92 0 0 0.270 9 0.82
22 22 A 1 0 0 0 0 0 0 0 8 74 2 5 2 0 4 1 0 2 0 0 92 0 0 1.062 35 0.44
23 23 A 0 0 1 0 0 0 0 1 2 0 2 0 0 0 4 61 3 20 0 5 92 0 0 1.292 43 0.41
24 24 A 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 53 7 25 1 12 92 0 0 1.262 42 0.40
25 25 A 99 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 92 0 0 0.060 2 0.99
26 26 A 0 2 0 0 3 0 0 2 66 0 14 12 0 0 0 0 0 0 0 0 92 0 0 1.081 36 0.42
27 27 A 1 3 0 0 0 0 0 2 2 0 0 0 0 1 1 1 1 3 13 71 92 0 0 1.147 38 0.50
28 28 A 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 92 0 0 0.000 0 1.00
29 29 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 92 0 0 0.000 0 1.00
30 30 A 1 55 1 10 0 0 0 0 2 0 9 11 0 0 1 3 3 0 3 0 92 0 0 1.574 52 0.13
31 31 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 85 0 5 92 0 0 0.593 19 0.70
32 32 A 0 0 0 0 0 0 0 0 1 0 1 0 0 10 3 0 5 15 64 0 92 0 0 1.167 38 0.45
33 33 A 0 0 0 0 0 0 0 27 73 0 0 0 0 0 0 0 0 0 0 0 92 0 0 0.585 19 0.65
34 34 A 16 7 0 74 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 92 0 0 0.809 26 0.73
35 35 A 0 0 0 0 0 0 0 0 0 82 3 1 1 0 1 0 11 1 0 0 92 0 0 0.716 23 0.56
36 36 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 96 0 3 92 0 0 0.203 6 0.94
37 37 A 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 92 0 0 0.000 0 1.00
38 38 A 10 0 1 0 0 0 0 0 2 0 11 3 73 0 0 0 0 0 0 0 92 0 0 0.944 31 0.44
39 39 A 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 1 82 0 15 92 0 4 0.601 20 0.78
40 40 A 0 0 0 0 0 0 0 0 16 73 1 5 3 1 0 0 0 0 0 0 92 0 0 0.895 29 0.47
41 41 A 0 93 0 0 2 0 0 0 0 0 1 0 0 0 0 0 1 1 1 0 92 0 0 0.343 11 0.77
42 42 A 0 0 0 0 0 1 0 5 0 0 1 0 0 1 13 20 4 54 0 0 92 0 0 1.358 45 0.30
43 43 A 0 1 0 0 1 0 0 0 0 0 11 0 1 62 4 2 10 2 5 0 92 0 5 1.374 45 0.38
44 44 A 7 14 1 1 65 0 3 0 1 0 0 3 1 0 1 2 0 0 0 0 92 0 0 1.286 42 0.44
45 45 A 0 0 0 0 0 0 0 0 0 0 8 68 0 0 0 0 0 0 4 20 92 0 0 0.911 30 0.37
46 46 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 92 0 0 0.000 0 1.00
47 47 A 0 2 1 1 0 0 0 0 0 13 0 1 0 4 33 2 41 0 1 0 92 0 0 1.496 49 0.30
48 48 A 0 0 0 0 0 0 0 1 22 0 2 1 0 0 0 0 0 1 0 73 92 0 0 0.793 26 0.46
49 49 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 92 0 0 0.000 0 1.00
50 50 A 0 27 73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 92 0 0 0.585 19 0.70
51 51 A 0 0 0 3 0 0 0 9 1 0 4 2 1 0 8 3 4 0 63 1 92 0 0 1.426 47 0.30
52 52 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 92 0 0 0.000 0 1.00
53 53 A 0 0 0 0 0 0 0 0 0 0 9 84 0 0 0 3 0 0 4 0 92 0 0 0.609 20 0.64
54 54 A 1 1 0 0 0 0 0 2 0 2 1 2 0 0 11 9 45 24 0 2 92 0 0 1.636 54 0.37
55 55 A 2 1 0 1 0 0 1 0 9 0 2 2 0 0 0 1 3 71 0 7 92 0 0 1.194 39 0.41
56 56 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 92 0 0 0.000 0 1.00
57 57 A 0 4 0 0 96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 92 0 0 0.179 5 0.96
58 58 A 0 0 0 0 0 0 0 0 3 0 0 25 0 0 9 45 11 5 2 0 92 0 0 1.513 50 0.35
59 59 A 1 0 0 1 0 0 0 0 0 0 5 3 0 0 12 71 1 0 3 2 92 1 0 1.112 37 0.49
60 60 A 0 3 0 0 1 0 0 0 4 78 2 11 0 0 0 0 0 0 0 0 91 0 0 0.820 27 0.60
61 61 A 0 0 0 0 1 0 0 0 0 98 1 0 0 0 0 0 0 0 0 0 92 0 0 0.120 3 0.92
62 62 A 0 97 1 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 92 0 0 0.180 5 0.93
63 63 A 0 1 0 0 0 0 3 0 1 0 37 0 53 0 0 0 0 3 1 0 92 0 0 1.074 35 0.43
64 64 A 0 16 2 0 0 0 0 0 1 0 0 0 0 1 79 0 0 0 0 0 92 0 0 0.661 22 0.36
65 65 A 91 2 2 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 92 1 0 0.410 13 0.75
66 66 A 5 0 0 0 0 0 0 0 1 0 77 16 0 0 0 0 0 0 0 0 91 0 0 0.708 23 0.51
67 67 A 0 4 0 0 0 0 0 4 8 2 82 0 0 0 0 0 0 0 0 0 92 0 0 0.718 23 0.58
68 68 A 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 96 92 0 0 0.179 5 0.90
69 69 A 0 0 0 0 0 0 0 8 0 0 30 0 1 1 0 0 0 0 57 3 92 0 0 1.090 36 0.45
70 70 A 1 0 3 0 0 0 0 96 0 0 0 0 0 0 0 0 0 0 0 0 92 0 0 0.203 6 0.79
71 71 A 0 2 0 0 0 0 0 0 0 0 0 0 0 1 12 5 78 1 0 0 92 0 0 0.786 26 0.55
72 72 A 0 2 0 0 0 0 0 0 0 0 0 0 0 3 70 1 24 0 0 0 92 0 0 0.839 27 0.52
73 73 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 92 0 0 0.000 0 1.00
74 74 A 0 93 0 2 0 0 0 0 0 0 2 0 0 0 0 0 2 0 0 0 92 0 0 0.313 10 0.80
75 75 A 0 4 0 0 0 0 2 0 0 0 0 0 0 10 0 0 0 21 2 61 92 0 0 1.158 38 0.46
76 76 A 0 1 0 75 0 0 0 0 2 0 1 0 0 0 14 7 0 0 0 0 92 0 0 0.852 28 0.40
77 77 A 1 8 90 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 92 0 0 0.387 12 0.87
78 78 A 0 0 0 0 0 0 0 1 0 0 0 0 0 0 3 1 0 95 0 0 92 0 0 0.263 8 0.81
79 79 A 0 0 3 0 0 0 0 2 0 0 0 90 0 1 1 2 0 0 0 0 92 0 0 0.469 15 0.72
80 80 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 92 0 0 0.000 0 1.00
81 81 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 84 3 0 1 0 92 0 0 0.564 18 0.72
82 82 A 8 1 24 61 2 0 0 0 0 0 0 0 0 0 1 2 0 1 0 0 92 0 0 1.154 38 0.47
83 83 A 0 0 0 0 0 0 0 0 11 0 0 2 0 1 0 0 1 85 0 0 92 0 0 0.563 18 0.71
84 84 A 0 0 0 1 0 0 1 0 0 0 2 3 0 75 0 0 9 0 8 1 92 0 0 0.966 32 0.52
85 85 A 1 0 0 0 0 0 0 0 0 0 0 1 0 96 0 0 1 0 1 0 91 0 0 0.241 8 0.84
86 86 A 0 24 30 43 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 90 0 0 1.168 38 0.61
87 87 A 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 2 0 92 2 0 90 0 0 0.394 13 0.75
88 88 A 7 1 0 0 0 0 0 2 80 0 0 3 0 0 0 0 0 4 1 1 90 0 0 0.845 28 0.60
89 89 A 0 0 0 0 0 0 0 0 0 0 0 0 0 99 0 0 0 1 0 0 90 0 0 0.061 2 0.96
90 90 A 0 0 0 0 0 0 0 1 0 0 1 2 0 0 0 94 0 1 0 0 90 0 0 0.289 9 0.82
91 91 A 0 1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 96 1 90 0 0 0.228 7 0.85
92 92 A 0 0 0 0 0 0 0 94 0 0 2 0 0 0 0 0 0 0 3 0 90 0 0 0.252 8 0.87
93 93 A 0 0 2 0 1 0 1 1 0 0 1 0 0 88 1 1 0 0 3 0 90 0 0 0.612 20 0.63
94 94 A 5 0 2 0 0 0 0 0 86 1 0 1 0 5 0 0 0 0 0 0 88 0 0 0.595 19 0.66
95 95 A 1 0 0 0 0 0 0 1 0 0 2 0 0 0 0 2 0 0 93 0 87 0 0 0.343 11 0.80
96 96 A 0 0 0 0 0 0 0 93 0 0 2 0 0 0 0 0 0 0 3 1 87 0 0 0.321 10 0.84
97 97 A 0 0 0 0 0 0 0 50 0 0 50 0 0 0 0 0 0 0 0 0 6 0 0 0.693 23 0.61
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
76 31 31 1 nQl
88 21 32 2 dLLc
88 25 38 1 hRl
89 27 27 2 pLLc
89 31 33 1 hKv
90 27 27 2 qSFt
90 31 33 1 hRi
91 21 32 2 dLLc
91 25 38 1 hRl
//