Complet list of 2cug hssp file
Complete list of 2cug.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 2CUG
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-17
HEADER CHAPERONE 26-MAY-05 2CUG
COMPND MOL_ID: 1; MOLECULE: MKIAA0962 PROTEIN; CHAIN: A; FRAGMENT: J DOMAIN (
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: MUS MUSCULUS; ORGANISM_COMMON: HOUSE M
AUTHOR S.OHNISHI,T.KIGAWA,M.SATO,S.KOSHIBA,M.INOUE,S.YOKOYAMA, RIKEN STRUCTUR
DBREF 2CUG A 8 82 UNP Q8BHI2 Q8BHI2_MOUSE 67 141
SEQLENGTH 88
NCHAIN 1 chain(s) in 2CUG data set
NALIGN 89
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : A2AS91_MOUSE 1.00 1.00 10 80 21 91 71 0 0 91 A2AS91 DnaJ homolog subfamily C member 16 (Fragment) OS=Mus musculus GN=Dnajc16 PE=4 SV=1
2 : Q4S4W9_TETNG 0.59 0.73 20 88 5 75 71 2 2 114 Q4S4W9 Chromosome 6 SCAF14737, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00024001001 PE=4 SV=1
3 : S7IPA0_CHLPS 0.56 0.76 20 86 4 71 68 1 1 96 S7IPA0 DnaJ domain protein (Fragment) OS=Chlamydia psittaci 84-8471/1 GN=CP8484711_0759 PE=4 SV=1
4 : C9JDR7_HUMAN 0.55 0.65 20 88 5 75 71 2 2 98 C9JDR7 DnaJ homolog subfamily B member 6 (Fragment) OS=Homo sapiens GN=DNAJB6 PE=2 SV=1
5 : G5B0W0_HETGA 0.55 0.66 18 88 3 75 73 2 2 107 G5B0W0 DnaJ-like protein subfamily B member 3 OS=Heterocephalus glaber GN=GW7_19304 PE=4 SV=1
6 : U6DXD5_NEOVI 0.55 0.66 18 88 3 75 73 2 2 114 U6DXD5 DnaJ (Hsp40) homolog, subfamily B, member 6 (Fragment) OS=Neovison vison GN=C9J2P2 PE=2 SV=1
7 : K1YWD8_9BACT 0.54 0.75 18 88 5 76 72 1 1 114 K1YWD8 DnaJ protein (Fragment) OS=uncultured bacterium GN=ACD_73C00701G0003 PE=4 SV=1
8 : G5DZA0_9PIPI 0.53 0.66 18 88 3 75 73 2 2 133 G5DZA0 Putative dnaj subfamily b member 6 (Fragment) OS=Pipa carvalhoi PE=2 SV=1
9 : K1XDP0_9BACT 0.53 0.76 18 88 5 76 72 1 1 129 K1XDP0 Chaperone protein DnaJ (Fragment) OS=uncultured bacterium GN=ACD_79C00333G0001 PE=4 SV=1
10 : D3DEH5_MYCGA 0.51 0.76 18 88 6 76 72 2 2 130 D3DEH5 DnaJ-like molecular chaperone domain protein OS=Mycoplasma gallisepticum (strain R(low / passage 15 / clone 2)) GN=dnaJ_3a PE=4 SV=1
11 : D3FG12_MYCGH 0.51 0.76 18 88 6 76 72 2 2 130 D3FG12 DnaJ-like molecular chaperone domain protein OS=Mycoplasma gallisepticum (strain R(high / passage 156)) GN=dnaJ_3 PE=4 SV=1
12 : J3T6X7_MYCGL 0.51 0.76 18 88 6 76 72 2 2 130 J3T6X7 DnaJ-like molecular chaperone domain protein OS=Mycoplasma gallisepticum NC95_13295-2-2P GN=dnaJ PE=4 SV=1
13 : J3TBJ3_MYCGL 0.51 0.76 18 88 6 76 72 2 2 130 J3TBJ3 DnaJ-like molecular chaperone domain protein OS=Mycoplasma gallisepticum CA06_2006.052-5-2P GN=dnaJ PE=4 SV=1
14 : J3TRS8_MYCGL 0.51 0.76 18 88 6 76 72 2 2 130 J3TRS8 DnaJ-like molecular chaperone domain protein OS=Mycoplasma gallisepticum WI01_2001.043-13-2P GN=dnaJ PE=4 SV=1
15 : J3YTU0_MYCGL 0.51 0.76 18 88 6 76 72 2 2 130 J3YTU0 DnaJ-like molecular chaperone domain protein OS=Mycoplasma gallisepticum WI01_2001.043-13-2P GN=dnaJ PE=4 SV=1
16 : J3YVQ7_MYCGL 0.51 0.76 18 88 6 76 72 2 2 130 J3YVQ7 DnaJ-like molecular chaperone domain protein OS=Mycoplasma gallisepticum NC06_2006.080-5-2P GN=dnaJ PE=4 SV=1
17 : J7GT31_MYCGL 0.51 0.76 18 88 6 76 72 2 2 130 J7GT31 DnaJ-like molecular chaperone domain protein OS=Mycoplasma gallisepticum NC08_2008.031-4-3P GN=dnaJ PE=4 SV=1
18 : J7GWZ9_MYCGL 0.51 0.76 18 88 6 76 72 2 2 130 J7GWZ9 DnaJ-like molecular chaperone domain protein OS=Mycoplasma gallisepticum NC08_2008.031-4-3P GN=dnaJ PE=4 SV=1
19 : F0Y3X4_AURAN 0.50 0.71 18 88 1 72 72 1 1 110 F0Y3X4 Putative uncharacterized protein (Fragment) OS=Aureococcus anophagefferens GN=AURANDRAFT_8963 PE=4 SV=1
20 : X1KC22_9ZZZZ 0.50 0.67 18 88 5 76 72 1 1 110 X1KC22 Marine sediment metagenome DNA, contig: S03H2_S18908 (Fragment) OS=marine sediment metagenome GN=S03H2_55351 PE=4 SV=1
21 : C1EGQ1_MICSR 0.49 0.72 20 82 26 94 69 2 6 94 C1EGQ1 Predicted protein (Fragment) OS=Micromonas sp. (strain RCC299 / NOUM17) GN=MICPUN_74160 PE=4 SV=1
22 : S6V6F0_PSESF 0.48 0.70 18 87 5 75 71 1 1 105 S6V6F0 Chaperone protein DnaJ (Fragment) OS=Pseudomonas syringae pv. actinidiae ICMP 18807 GN=A244_23545 PE=4 SV=1
23 : C1N3X9_MICPC 0.47 0.68 16 82 1 73 73 2 6 75 C1N3X9 Predicted protein (Fragment) OS=Micromonas pusilla (strain CCMP1545) GN=MICPUCDRAFT_9309 PE=4 SV=1
24 : C9J1G2_HUMAN 0.47 0.69 19 88 4 75 72 2 2 122 C9J1G2 DnaJ homolog subfamily B member 2 (Fragment) OS=Homo sapiens GN=DNAJB2 PE=2 SV=1
25 : D4TU26_9NOST 0.47 0.72 15 88 1 74 75 2 2 123 D4TU26 Uncharacterized protein OS=Raphidiopsis brookii D9 GN=CRD_02511 PE=4 SV=1
26 : H0ACQ6_9ARCH 0.47 0.70 15 88 1 74 74 0 0 95 H0ACQ6 Chaperone protein (Fragment) OS=Candidatus Haloredivivus sp. G17 GN=HRED_02545 PE=4 SV=1
27 : K1TP09_9ZZZZ 0.47 0.71 18 88 5 76 72 1 1 123 K1TP09 Protein containing Heat shock protein DnaJ (Fragment) OS=human gut metagenome GN=LEA_07285 PE=4 SV=1
28 : S6N188_PSESF 0.47 0.69 18 88 5 76 72 1 1 110 S6N188 Chaperone protein DnaJ (Fragment) OS=Pseudomonas syringae pv. actinidiae ICMP 18886 GN=A3SM_21714 PE=4 SV=1
29 : S6QCJ5_PSESF 0.47 0.69 18 88 5 76 72 1 1 111 S6QCJ5 Chaperone protein DnaJ (Fragment) OS=Pseudomonas syringae pv. actinidiae ICMP 19070 GN=A259_23546 PE=4 SV=1
30 : U6DDM3_NEOVI 0.47 0.69 19 88 4 75 72 2 2 117 U6DDM3 DnaJ (Hsp40) homolog, subfamily B, member 2 (Fragment) OS=Neovison vison GN=C9JRD2 PE=2 SV=1
31 : F6S4A9_ORNAN 0.46 0.65 5 86 4 86 83 1 1 173 F6S4A9 Uncharacterized protein OS=Ornithorhynchus anatinus GN=DNAJC5G PE=4 SV=2
32 : F8WF76_HUMAN 0.46 0.62 18 88 6 74 72 3 4 114 F8WF76 DnaJ homolog subfamily A member 4 OS=Homo sapiens GN=DNAJA4 PE=2 SV=1
33 : H2U1W8_TAKRU 0.46 0.68 10 86 11 88 78 1 1 186 H2U1W8 Uncharacterized protein OS=Takifugu rubripes PE=4 SV=1
34 : U6DIB6_NEOVI 0.46 0.66 12 86 9 84 76 1 1 127 U6DIB6 DnaJ homolog subfamily C member 5 (Fragment) OS=Neovison vison GN=DNJC5 PE=2 SV=1
35 : X1V5P0_9ZZZZ 0.46 0.75 14 88 2 76 76 2 2 104 X1V5P0 Marine sediment metagenome DNA, contig: S12H4_S21867 (Fragment) OS=marine sediment metagenome GN=S12H4_56325 PE=4 SV=1
36 : E5RGF4_HUMAN 0.45 0.68 12 86 13 88 76 1 1 96 E5RGF4 DnaJ homolog subfamily C member 5B (Fragment) OS=Homo sapiens GN=DNAJC5B PE=2 SV=1
37 : Q4VRW3_TOBAC 0.45 0.66 15 88 1 77 77 2 3 158 Q4VRW3 Putative BY-2 cell cycle-related protein (Fragment) OS=Nicotiana tabacum PE=2 SV=1
38 : C1BEB8_RHOOB 0.44 0.65 14 80 2 72 71 1 4 82 C1BEB8 Uncharacterized protein OS=Rhodococcus opacus (strain B4) GN=ROP_pKNR-00660 PE=4 SV=1
39 : R7A3A7_9CLOT 0.44 0.67 12 88 1 78 78 1 1 155 R7A3A7 Chaperone protein DnaJ OS=Clostridium sp. CAG:43 GN=BN653_01093 PE=4 SV=1
40 : F4NYM3_BATDJ 0.43 0.66 15 88 1 75 76 2 3 78 F4NYM3 Putative uncharacterized protein (Fragment) OS=Batrachochytrium dendrobatidis (strain JAM81 / FGSC 10211) GN=BATDEDRAFT_7535 PE=4 SV=1
41 : S4HPF6_GARVA 0.43 0.64 18 88 10 80 72 2 2 111 S4HPF6 DnaJ domain protein (Fragment) OS=Gardnerella vaginalis JCP8070 GN=HMPREF1580_00904 PE=4 SV=1
42 : S7PX11_MYOBR 0.43 0.58 12 86 11 86 77 3 3 114 S7PX11 DnaJ like protein subfamily C member 5G OS=Myotis brandtii GN=D623_10031185 PE=4 SV=1
43 : E4XAG1_OIKDI 0.42 0.68 3 79 2 78 77 0 0 151 E4XAG1 Whole genome shotgun assembly, reference scaffold set, scaffold scaffold_18 OS=Oikopleura dioica GN=GSOID_T00005227001 PE=4 SV=1
44 : K2D1S5_9BACT 0.42 0.63 4 80 12 89 78 1 1 126 K2D1S5 Chaperone protein DnaJ (Fragment) OS=uncultured bacterium GN=dnaJ PE=4 SV=1
45 : L5LMV1_MYODS 0.42 0.57 12 86 11 86 77 3 3 114 L5LMV1 DnaJ like protein subfamily C member 5G OS=Myotis davidii GN=MDA_GLEAN10025539 PE=4 SV=1
46 : U6NTR2_HAECO 0.42 0.67 12 80 1 73 73 2 4 109 U6NTR2 Heat shock protein DnaJ domain containing protein (Fragment) OS=Haemonchus contortus GN=HCOI_01304200 PE=4 SV=1
47 : E5GC04_CUCME 0.41 0.59 1 72 8 78 73 3 3 78 E5GC04 Chaperone protein dnaj 11 (Fragment) OS=Cucumis melo subsp. melo PE=4 SV=1
48 : H0Y5E9_HUMAN 0.41 0.67 3 76 39 112 75 2 2 116 H0Y5E9 DnaJ homolog subfamily C member 1 (Fragment) OS=Homo sapiens GN=DNAJC1 PE=4 SV=1
49 : M0XJX1_HORVD 0.41 0.57 9 79 1 79 79 3 8 113 M0XJX1 Uncharacterized protein OS=Hordeum vulgare var. distichum PE=4 SV=1
50 : R1ECA8_BOTPV 0.41 0.64 12 87 61 138 78 2 2 138 R1ECA8 Putative chaperone protein OS=Botryosphaeria parva (strain UCR-NP2) GN=UCRNP2_7887 PE=4 SV=1
51 : B8BVE7_THAPS 0.40 0.59 18 87 1 78 78 3 8 102 B8BVE7 Predicted protein (Fragment) OS=Thalassiosira pseudonana GN=THAPSDRAFT_32181 PE=4 SV=1
52 : M4G639_MAGP6 0.40 0.63 1 88 2 92 91 2 3 312 M4G639 Uncharacterized protein OS=Magnaporthe poae (strain ATCC 64411 / 73-15) PE=4 SV=1
53 : C1EJ59_MICSR 0.39 0.66 9 84 1 76 77 2 2 76 C1EJ59 Predicted protein (Fragment) OS=Micromonas sp. (strain RCC299 / NOUM17) GN=MICPUN_89153 PE=4 SV=1
54 : D8SUB3_SELML 0.39 0.57 9 79 1 71 72 2 2 74 D8SUB3 Putative uncharacterized protein (Fragment) OS=Selaginella moellendorffii GN=SELMODRAFT_72968 PE=4 SV=1
55 : M0TPG3_MUSAM 0.39 0.59 1 88 2 93 93 3 6 545 M0TPG3 Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1
56 : A9SEA7_PHYPA 0.38 0.60 18 88 5 76 73 3 3 104 A9SEA7 Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_128423 PE=4 SV=1
57 : H9FLR7_MACMU 0.38 0.63 3 88 14 99 87 2 2 163 H9FLR7 DnaJ homolog subfamily C member 1 (Fragment) OS=Macaca mulatta GN=DNAJC1 PE=2 SV=1
58 : J9PB27_CANFA 0.38 0.48 12 86 11 102 92 2 17 173 J9PB27 Uncharacterized protein OS=Canis familiaris GN=DNAJC5G PE=4 SV=1
59 : M2NM12_BAUCO 0.38 0.60 1 88 2 91 90 2 2 551 M2NM12 Uncharacterized protein OS=Baudoinia compniacensis (strain UAMH 10762) GN=BAUCODRAFT_368217 PE=4 SV=1
60 : W6L9Q5_9TRYP 0.38 0.54 1 87 345 441 97 2 10 767 W6L9Q5 Genomic scaffold, scaffold_8 OS=Phytomonas sp. isolate Hart1 GN=GSHART1_T00007657001 PE=4 SV=1
61 : C5GR61_AJEDR 0.37 0.61 1 88 46 135 90 2 2 623 C5GR61 C2H2 finger domain-containing protein OS=Ajellomyces dermatitidis (strain ER-3 / ATCC MYA-2586) GN=BDCG_06491 PE=4 SV=1
62 : C5JR72_AJEDS 0.37 0.61 1 88 46 135 90 2 2 624 C5JR72 C2H2 finger domain-containing protein OS=Ajellomyces dermatitidis (strain SLH14081) GN=BDBG_05066 PE=4 SV=1
63 : U3B150_9CAUL 0.37 0.62 1 88 7 95 90 2 3 414 U3B150 Chaperone protein DnaJ OS=Brevundimonas abyssalis TAR-001 GN=dnaJ PE=3 SV=1
64 : A4HEY2_LEIBR 0.36 0.52 1 87 381 480 100 2 13 866 A4HEY2 Uncharacterized protein OS=Leishmania braziliensis GN=LBRM_26_1290 PE=4 SV=1
65 : E5A343_LEPMJ 0.36 0.62 2 88 6 94 90 3 4 550 E5A343 Similar to meiotically up-regulated gene 185 protein OS=Leptosphaeria maculans (strain JN3 / isolate v23.1.3 / race Av1-4-5-6-7-8) GN=LEMA_P094650.1 PE=4 SV=1
66 : G3SWH9_LOXAF 0.36 0.48 12 86 11 102 92 2 17 176 G3SWH9 Uncharacterized protein OS=Loxodonta africana GN=DNAJC5G PE=4 SV=1
67 : K7E6C1_MONDO 0.36 0.65 2 79 50 133 84 2 6 150 K7E6C1 Uncharacterized protein OS=Monodelphis domestica PE=4 SV=1
68 : R1DP17_EMIHU 0.36 0.64 16 88 1 70 73 1 3 70 R1DP17 Uncharacterized protein (Fragment) OS=Emiliania huxleyi CCMP1516 GN=EMIHUDRAFT_50029 PE=4 SV=1
69 : R1G0Y0_BOTPV 0.36 0.61 1 88 8 97 90 2 2 548 R1G0Y0 Putative meiotically up-regulated gene 185 protein OS=Botryosphaeria parva (strain UCR-NP2) GN=UCRNP2_8252 PE=4 SV=1
70 : D3D9P1_9ACTO 0.35 0.53 14 79 2 78 79 3 15 130 D3D9P1 Heat shock protein DnaJ domain protein OS=Frankia sp. EUN1f GN=FrEUN1fDRAFT_6513 PE=4 SV=1
71 : D3DA34_9ACTO 0.35 0.53 14 79 2 77 78 3 14 129 D3DA34 Heat shock protein DnaJ domain protein OS=Frankia sp. EUN1f GN=FrEUN1fDRAFT_6656 PE=4 SV=1
72 : DNJ5G_HUMAN 0.35 0.47 10 86 9 102 95 4 19 189 Q8N7S2 DnaJ homolog subfamily C member 5G OS=Homo sapiens GN=DNAJC5G PE=2 SV=1
73 : M0S7A2_MUSAM 0.35 0.64 9 87 1 80 80 1 1 120 M0S7A2 Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1
74 : V9LJH5_CALMI 0.35 0.58 15 79 7 78 72 3 7 90 V9LJH5 DPH4, JJJ3-like protein OS=Callorhynchus milii PE=4 SV=1
75 : F6Q2G4_HORSE 0.34 0.46 12 86 11 102 93 4 19 177 F6Q2G4 Uncharacterized protein OS=Equus caballus GN=DNAJC5G PE=4 SV=1
76 : H3B1J4_LATCH 0.33 0.59 9 79 1 78 78 3 7 149 H3B1J4 Uncharacterized protein OS=Latimeria chalumnae PE=4 SV=1
77 : W5U911_ICTPU 0.33 0.51 20 88 10 99 90 3 21 435 W5U911 DnaJ subfamily A member 2 OS=Ictalurus punctatus GN=DNAJA2 PE=2 SV=1
78 : A0K0K2_ARTS2 0.32 0.55 18 80 7 84 78 3 15 128 A0K0K2 Heat shock protein DnaJ domain protein OS=Arthrobacter sp. (strain FB24) GN=Arth_3447 PE=4 SV=1
79 : F7B8I1_MACMU 0.32 0.45 10 86 9 100 93 4 17 187 F7B8I1 Uncharacterized protein OS=Macaca mulatta GN=DNAJC5G PE=4 SV=1
80 : F7FB09_MACMU 0.32 0.60 6 81 37 123 87 2 11 153 F7FB09 Guanine nucleotide-binding protein subunit gamma OS=Macaca mulatta GN=GNG10 PE=3 SV=1
81 : F9XMZ7_MYCGM 0.32 0.59 1 88 4 93 90 2 2 565 F9XMZ7 Uncharacterized protein OS=Mycosphaerella graminicola (strain CBS 115943 / IPO323) GN=MYCGRDRAFT_49647 PE=4 SV=1
82 : G1QSJ1_NOMLE 0.32 0.42 10 86 9 102 95 4 19 189 G1QSJ1 Uncharacterized protein OS=Nomascus leucogenys GN=DNAJC5G PE=4 SV=1
83 : J3QCM2_PUCT1 0.32 0.51 4 85 2 91 90 3 8 255 J3QCM2 Uncharacterized protein OS=Puccinia triticina (isolate 1-1 / race 1 (BBBD)) GN=PTTG_09138 PE=4 SV=1
84 : N1PCB8_MYCP1 0.32 0.60 1 88 6 95 90 2 2 518 N1PCB8 Uncharacterized protein (Fragment) OS=Mycosphaerella pini (strain NZE10 / CBS 128990) GN=DOTSEDRAFT_158783 PE=4 SV=1
85 : R1CI69_EMIHU 0.32 0.58 19 82 7 83 77 3 13 94 R1CI69 Uncharacterized protein (Fragment) OS=Emiliania huxleyi CCMP1516 GN=EMIHUDRAFT_65160 PE=4 SV=1
86 : F6I297_VITVI 0.31 0.49 2 88 94 188 101 4 20 481 F6I297 Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0324g00040 PE=3 SV=1
87 : F7F8U7_CALJA 0.31 0.60 6 81 37 123 87 2 11 153 F7F8U7 Guanine nucleotide-binding protein subunit gamma OS=Callithrix jacchus GN=GNG10 PE=3 SV=1
88 : V5I6F0_ANOGL 0.31 0.55 3 87 2 87 86 1 1 149 V5I6F0 J domain-containing protein (Fragment) OS=Anoplophora glabripennis GN=JDP PE=4 SV=1
89 : K0SWI4_THAOC 0.30 0.44 3 87 148 245 99 3 15 677 K0SWI4 Uncharacterized protein OS=Thalassiosira oceanica GN=THAOC_13801 PE=4 SV=1
## ALIGNMENTS 1 - 70
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A G 0 0 126 13 53 A D G GGSSPG A
2 2 A S - 0 0 130 16 53 S S S AGTTSTS S S
3 3 A S + 0 0 111 21 58 S AS G R S SKAAASS G G
4 4 A G + 0 0 69 23 60 SG TG G S G QSGGRAA R G
5 5 A S - 0 0 133 24 69 A AV GD P S D SSGGRGG A G
6 6 A S + 0 0 121 26 71 S SD VL S E L SSNNGKG G A
7 7 A G + 0 0 64 26 68 R DD RE S G E GTSSEEG A S
8 8 A I + 0 0 154 26 83 V VI FL G N L GAGGTGT L Q
9 9 A L - 0 0 161 31 88 Q AR AFM AMLS F EQAARIS V A
10 10 A Q - 0 0 182 36 74 Q R R KK RDQ TASQ D EDPPNGD K A
11 11 A S - 0 0 75 36 84 S R K EE DLS PRQE L PKAARGG G A
12 12 A L - 0 0 160 46 80 L L ML L M LKILMLVPL AVVE VLASNNVSGLL N
13 13 A S - 0 0 85 46 78 S S SS S A SETSPSEST ARGA ESQQEERNASY T
14 14 A A S S+ 0 0 58 50 85 A R TTPT AE KMGKPVEHK DRIG EKGSEELNERC AA
15 15 A L S S- 0 0 62 55 87 L MM V ASITMTSI TLRTRSVYT EAGP VSVERRMEVSG VT
16 16 A D S S- 0 0 167 57 73 D D AA G GGKGGEKD GRKGERQQP DNDH QGKNKKAMKGSEKD
17 17 A F S S- 0 0 61 57 85 F A RK E EEREVRRM TRTTESLSY VDHT LTTSTTRRTKHTTH
18 18 A D > - 0 0 36 82 48 D DDDEDDDDDDDDDDDD DD DEDDD SQSSDADDDEDSDTSSSNSGDDDDEDNTSNDDDNSSNESD
19 19 A P H > S+ 0 0 0 85 56 P YYYYYYYYYYYYYYYY YPYYYYYYYLYVLYLYPYYFLLYLPFFYFYLYWLHFLYLYYFPYLCYYP
20 20 A Y H >>S+ 0 0 62 90 2 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
21 21 A R H 45S+ 0 0 171 90 62 RRDEEEEDEEEEEEEEEEREKEKEEDEEEDVDKHEENREDKAKDATEQADGEKAAKQAEEEEEEDANDER
22 22 A V H <5S+ 0 0 19 90 37 VVVVVVIVIIIIIIIIIIVVIVLIILVVVIVIVVVIIVVLVVEIVTVFVIILIIRVFVLVLLIVLVVRLV
23 23 A L H <5S- 0 0 7 90 3 LLLLPLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
24 24 A G T <5 + 0 0 60 90 29 GGGGGGGGGGGGGGGGGGGGDGDDGGEGGDGGGGGGKGGEGEGGEGGGGGGGGRNGGEGGGGGQGEGGGG
25 25 A V < - 0 0 17 90 28 VVVVVVLVVVVVVVVVVVVVVVLVVVVVVVLVLLILVLVIVLVVLIIVVVVVIVVVVLVVLLVVVLVVVV
26 26 A S > - 0 0 78 90 73 SHSQPQSQPSSSSSSSSSPSSESPSSEEEPQKEDAHNSPPSKEAKAPQHDSDEDSEQKQKGGECEKSDEE
27 27 A R T 3 S+ 0 0 227 90 56 RKKRRRRRRRRRRRRRRRRKRRRRREKRRRKPKKRKRPKAKKRRKAMQPRKKRPPYQKRRRRRRRKRPRP
28 28 A T T 3 S+ 0 0 126 90 68 TSTHQHTNNSSSSSSSSSDSRGGSDNTGGSGSGNNGNSDTDGTNGNTDGERSGRSDDGHTTTTTTGKGQS
29 29 A A < - 0 0 7 89 17 AAAAAAAAAAAAAAAAAAAAASAAAAASSAAAAAAAAAAAAAAAASAAAASAAAAAAAAAAAIAAAACAA
30 30 A S > - 0 0 83 89 51 STSSSSSSNTTTTTTTTTDSNSGSDSTSSSTSSTTSSSDSDSSSSDSSSSKSTDSTSSTTTTDNTSGSTS
31 31 A Q H > S+ 0 0 70 89 69 QQPPSAEPDQQQQQQQQQETDEDAKQVEEAPPASDNEQDSEPEEPECSAQEQDDAISPEQEEATQPKEDA
32 32 A A H > S+ 0 0 71 89 59 AEEEEEAENQQQQQQQQQSDGAADEDEAADEEEDEEEAAADDKEDLRAAAKDDAEDAEEQEEAQDDAAES
33 33 A D H > S+ 0 0 79 89 41 DDEDADDDEDDDDDDDDDADEDDDQEEDDDDEDDEEDDTVTEEAETEDEDDAETESDDEQEEGEEEEEEQ
34 34 A I H X S+ 0 0 1 90 18 IIIIIIIIIIIIIIIIIIIIILIIIIILLIIIIIIILILIIIIIIIIIIIIIIIIIIIIIIILILVILII
35 35 A K H X S+ 0 0 100 90 33 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRAKKTKKNKKKRRRKKKRRRRKKKKKKKKKAKKT
36 36 A K H X S+ 0 0 129 90 46 KKKKKKKKKKKKKKKKKKKRRKRKQKKKKKKKKKRKKSKKKKKTKKAKAKSKKTKTKKKAKKAKKKRRKH
37 37 A A H X S+ 0 0 15 90 38 AASAAAAAATTTTTTTTTAAAAAAAAAAAAAAASATAAAAAAAAAAAAAAAAAQASAAAQAAAQASAAAA
38 38 A Y H X S+ 0 0 57 90 6 YYYYYYYYYFFFFFFFFFYYYYHYYYYYYYYYYYFYYYYYYYYYYYYYYYYYYYFYYYYYYYYYYYYYYY
39 39 A K H X S+ 0 0 116 90 35 KRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRYRRRKRKRRHRRRRKLLRsRKKKRKRsRKRR
40 40 A K H X S+ 0 0 121 90 39 KKKKKKQKKKKKKKKKKKKRKRKRRKKRRRKKKKKKRRTLKRNKRKKKRRKKKKNRKkRKKKKKKkQRRT
41 41 A L H X S+ 0 0 33 90 48 LLLLLLQLLLLLLLLLLLLKLLLKQKKLLKLLLLLLLLLKLLKLLLLLLILATMLLLLKLKKLLKLLKKL
42 42 A A H < S+ 0 0 8 90 27 AAAAAAAAAAAAAAAAAAAASASAAAAAAAAAAAAAALAAAAASAAASAAAAAASASAAAAAAAAAASAM
43 43 A R H < S+ 0 0 195 90 50 RLVLLLLLIMMMMMMMMMVMLMLLRKIMMLLLLLFLMRKIRLRLLLRLMLLLLLGLLLLMLLMMLLRLLR
44 44 A E H < S+ 0 0 145 90 68 EKKKKKQKKKKKKKKKKKKKRKKQKKQKKQKKKKKKIRKKKKDQKKITRLKQKVVKTKELEEAVEKRAER
45 45 A W S < S+ 0 0 116 90 53 WWYWWWYWFYYYYYYYYYYFYHYWYYYHHWFYYYYHWHYCYYVLYWCLWHFHLLAWLYLFHHHFLYHALH
46 46 A H >> - 0 0 70 90 3 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHKHHHHHHHHHHHHHHHHHHH
47 47 A P T 34 S+ 0 0 38 90 2 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
48 48 A D T 34 S+ 0 0 141 90 3 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
49 49 A K T <4 S+ 0 0 172 90 49 KKKKKKRKKRRRRRRRRRKKKRKKVSKRRKKKKKRKKTAKLKKKKKVKKRPKKKKKKKRVRRRVRKLRRT
50 50 A N < + 0 0 47 90 51 NnnntnnnnnnnnnnnnnnnqnqnnNnnnnnnnnnnnRnnnnNnnhvninnvcnhhnnninnNannvGnr
51 51 A K + 0 0 187 69 44 Kegeeegeg.........ddgdgd.Ggdddeddd.dgtg..gPgge..gdde..e..ggeggggggg.gq
52 52 A D S > S- 0 0 127 88 63 DkDkkkDkNdddddddddNDvDvkeDDDDkD.NNdDkdDntaSDakediqkramdddDeqNNekeDl.ee
53 53 A P T 3 S+ 0 0 125 88 79 PEAEEEHEPSSSSSSSSSPKEKEEPDKKKEP.PPDPYPQPKQPLQANEAEKATNAAEAEHVVDARPE.EH
54 54 A G T 3> S+ 0 0 45 90 71 GEEEEETEDDDDDDDDDDQQRAKFGATAAFGEEEGAEAALEAEFAMSNENAEGGASNQHAEESETQSGWD
55 55 A A H <> S+ 0 0 14 90 26 AAAAAAAAAAAAAAAAAAAAASAAADASSAAGAAAAAAAAAAAAAAAAEAKSAATAAAAAAAAATAASAA
56 56 A E H > S+ 0 0 83 90 50 EEEEEEEEEEEEEEEEEEEEQEQEEEEEEEAEAAETEDAEEEAGEEEEaDhEDEEaEATQssAQAAQETA
57 57 A D H > S+ 0 0 98 76 62 DKKRRRDRAEEEEEEEEEEADEQKEEEEERE.EDEEAEDEE.AE.K.TgAdVEE.lTEKSaa.R.EEEA.
58 58 A R H X S+ 0 0 115 88 70 RRRKRKKRKKKKKKKKKKNKRMRKKKKMMKKKKKRKKHKMKIVKIQEQRRKKVANKQIVKIIKKLITTM.
59 59 A F H X S+ 0 0 49 90 2 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFLFFFFFFFFFFFFFFFFFFFFFFFFFFFFLFFL
60 60 A I H X S+ 0 0 97 90 60 IKKKKKKKKKKKKKKKKKKKVKMKKKKKKKKKKKKKKQKKKKHKKKIRQKVKKKRQRKAEAAKEAKLKAQ
61 61 A Q H >X S+ 0 0 58 90 53 QEEQQQEEEEEEEEEEEEREKEAEEKEEEEELEEEEQHEQDEKLEKKQKAQAQLQEQEESEEEEEELEEQ
62 62 A I H 3X S+ 0 0 1 90 30 ILVVVVAVAVVVVVVVVVVCIAIVIIAAAVIIIIVIIIAIVILIIIILIIIVVVIILIVIIIIIVIVLVV
63 63 A S H 3X S+ 0 0 24 90 72 SSSASASASNNNNNNNNNAAQNQANNANNANSNNNNSLSSSNKGNAQVHNSTSNVNVNQSQQSSRNANQI
64 64 A K H S+ 0 0 23 90 32 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYHYNHYHYYYYYHYRHYYYYHYYFWYYYHYYYYYYYHYYHY
67 67 A E H X5S+ 0 0 77 90 51 EEEEEEEEEEEEEEEEEEDEEEEEEDDEEEAESAEADASQDSDESESEQEDEAMDRESEREEGQEAEQET
68 68 A I H <5S+ 0 0 36 90 29 IVVVVVVVIVVVVVVVVVCVVVTVVVVVVVTVIIVIVQVVVVFTVITVVTVICLVVVIVVVVVVVIVVVV
69 69 A L H <5S+ 0 0 5 90 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
70 70 A S H <5S+ 0 0 38 90 39 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSNTSTSRSSKSKMSSSKSTGRSSNSKSSSSSSSSSKSSR
71 71 A N S X S+ 0 0 146 90 65 EEPAAASAPEEEEEEEEEAPAAPKAKPAAKPPEAAIPPPPKEPEPAPDEDEEAKEPDPPMPPDPNPEPPP
73 73 A E H > S+ 0 0 141 89 62 ENQKQKQKQEEEEEEEEEQEESEHEDDSSHEKATDSQDEQQKQVKK EKLKQDNEFEKQEQQQEQKEQQS
74 74 A K H > S+ 0 0 90 89 47 KKKKKKKKKKKKKKKKKKKKKKRKTKKKKKRKKKKKKHKRMKNKKK RRQKKKKKMRKEKEEKKEKTKEQ
75 75 A R H X S+ 0 0 89 89 16 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRHRRRRRRRRRRR RRKKRKKRRRRRRRRRRRRRRRR
76 76 A T H X S+ 0 0 52 89 74 TNEDGDQDAKKKKKKKKKARRAREEKAAAERDRNASQARSAKAFKQ QAEKEAMQHQKARAAAKAKKEAA
77 77 A N H X S+ 0 0 69 88 90 NTSIIIVIQLLLLLLLLLARNANIRKRAAILVIIAIIYQFRIKDIE LRVLAIIERIWVWWAAWIDVWD
78 78 A Y H X>S+ 0 0 57 88 8 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYHYYYYLYYF YYYYYYYYYYYYYYYYYYYYYY
79 79 A D H ><5S+ 0 0 121 88 5 DDDDDDDDDDDDDDDDDDDDDDDDNDDDDDDDDDDDDDDNDDDDDD DDDDDDDDDDDDDDDDDDDDDD
80 80 A H H 3<5S+ 0 0 142 80 81 HRRKHRQRQTTTTTTTTTSQMQSRRQQQQREQEKHKLQQIAR HRR IQAR IMDRSLSSRFAR RS
81 81 A Y H ><5S- 0 0 113 75 60 YYYYYFYFYYYYYYYYYYFTYTYFYFYYYYGYYFYY FHIH H FYHY YRIHHSHHFGHH HH
82 82 A G T <<5 - 0 0 55 73 26 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG GGRG G GGGG GGLGEGRRGGEG GE
83 83 A S T 3 - 0 0 36 82 48 DSDDTD DSDSSDS SNDK
19 19 A P H > S+ 0 0 0 85 56 LLYWLW YLCYLLYYYCYH
20 20 A Y H >>S+ 0 0 62 90 2 YYYYYYYYYYYYYYYHYYY
21 21 A R H 45S+ 0 0 171 90 62 RAKEASDDAEEAKVEPEAG
22 22 A V H <5S+ 0 0 19 90 37 VVVIVIIVVVLVTLVDVIA
23 23 A L H <5S- 0 0 7 90 3 LLLLLLLLLLLLLLLVLLL
24 24 A G T <5 + 0 0 60 90 29 GDEGEGGNEGGEEGGNGGG
25 25 A V < - 0 0 17 90 28 VLVALAVVLVILLIVKVCV
26 26 A S > - 0 0 78 90 73 GKDHKTSAKSTKIERESDD
27 27 A R T 3 S+ 0 0 227 90 56 PKYPKPPRKRRKSRSPREF
28 28 A T T 3 S+ 0 0 126 90 68 SGDSGCSTGSQGrNNNSND
29 29 A A < - 0 0 7 89 17 AAADADAAAAAAaAA.ASA
30 30 A S > - 0 0 83 89 51 SSTSSSSTSGTSTTS.GSD
31 31 A Q H > S+ 0 0 70 89 69 APDQPQERPKEPEDE.KVS
32 32 A A H > S+ 0 0 71 89 59 SEEQESNQEADEAED.AEK
33 33 A D H > S+ 0 0 79 89 41 QDTEDEEEDEETEEE.EQT
34 34 A I H X S+ 0 0 1 90 18 IFILVLLIVIISIILAIII
35 35 A K H X S+ 0 0 100 90 33 TKRKKRKSKAKKRKKEATK
36 36 A K H X S+ 0 0 129 90 46 HKLQKQKRKRKITKRQRAS
37 37 A A H X S+ 0 0 15 90 38 ASSNAKAASAALAAAKAEA
38 38 A Y H X S+ 0 0 57 90 6 YYYYYYYYYYYQYYYFYYY
39 39 A K H X S+ 0 0 116 90 35 RsRQsQrRsRRsRRRkRKR
40 40 A K H X S+ 0 0 121 90 39 TkRKrKkArQRkKRRkQVK
41 41 A L H X S+ 0 0 33 90 48 LLLLLLLLKLKLQKLLLRL
42 42 A A H < S+ 0 0 8 90 27 IAAVAAKMLAAAAAAAAAA
43 43 A R H < S+ 0 0 195 90 50 RLLLLLKRARLLLLLRRLL
44 44 A E H < S+ 0 0 145 90 68 RRRLKLALFRLQREKSRQK
45 45 A W S < S+ 0 0 116 90 53 HYWYYYYHYYLYYLHYYYY
46 46 A H >> - 0 0 70 90 3 HHHHHHRHHHHHHHHHHHH
47 47 A P T 34 S+ 0 0 38 90 2 PPPPPPKPPPPPPPPPPPP
48 48 A D T 34 S+ 0 0 141 90 3 DDDDDDLDDDDDDDDDDDD
49 49 A K T <4 S+ 0 0 172 90 49 TKKKKKALKRRKKRRVRKK
50 50 A N < + 0 0 47 90 51 rnhqnqkenynninhnyNf
51 51 A K + 0 0 187 69 44 sggagdddggggege.gee
52 52 A D S > S- 0 0 127 88 63 eaNeaenntpeakegepnk
53 53 A P T 3 S+ 0 0 125 88 79 HQSLQVPGQQEQLETPQKK
54 54 A G T 3> S+ 0 0 45 90 71 DADEAENGASAAEAENSEH
55 55 A A H <> S+ 0 0 14 90 26 AAVEAEAAAAAAAATAAAN
56 56 A E H > S+ 0 0 83 90 50 AETrErGdEETERTaEEED
57 57 A D H > S+ 0 0 98 76 62 ..Aq.qDn.EK.QKgQEQ.
58 58 A R H X S+ 0 0 115 88 70 .IKRIRKGIATIKTHKAKR
59 59 A F H X S+ 0 0 49 90 2 LFFFFFFLFFFFFFFFFFF
60 60 A I H X S+ 0 0 97 90 60 QKQIKIKLKLAKDAKKLQV
61 61 A Q H >X S+ 0 0 58 90 53 QEEEEEEGELEEQEQELLS
62 62 A I H 3X S+ 0 0 1 90 30 VIIVIVIIIVVIVIVIVLI
63 63 A S H 3X S+ 0 0 24 90 72 INNDNDSMNAQNGQNSAKQ
64 64 A K H S+ 0 0 23 90 32 YHYWHWYFHYYHYHYYYKY
67 67 A E H X5S+ 0 0 77 90 51 TAQKAKEAAEEAKEEEEED
68 68 A I H <5S+ 0 0 36 90 29 VIVIVIVVITVIIVVVTVV
69 69 A L H <5S+ 0 0 5 90 0 LLLLLLLLLLLLLLLLLLL
70 70 A S H <5S+ 0 0 38 90 39 RSSGSGTSSKSSSSASKCS
71 71 A N S X S+ 0 0 146 90 65 PSPEPEPAPSPSAPSDSPD
73 73 A E H > S+ 0 0 141 89 62 SKDEKKEKKQQKKQKEQEK
74 74 A K H > S+ 0 0 90 89 47 QKKTKTKTKAEKLETKARK
75 75 A R H X S+ 0 0 89 89 16 RRRKRKKRRARRRRRRAKR
76 76 A T H X S+ 0 0 52 89 74 AKLRKKEAKAAKEAASASK
77 77 A N H X S+ 0 0 69 88 90 DIEEIELEIEWIRWQLENA
78 78 A Y H X>S+ 0 0 57 88 8 YYYYYYYYYLYYYYYYLYY
79 79 A D H ><5S+ 0 0 121 88 5 DDDDDDDDDQDDDDDDQDD
80 80 A H H 3<5S+ 0 0 142 80 81 QI R RRQQSQKSKRQKN
81 81 A Y H ><5S- 0 0 113 75 60 HS H Y HYHHTHFYYWY
82 82 A G T <<5 - 0 0 55 73 26 GG G G G EGGEGG RG
83 83 A S T 3