Complet list of 2cuf hssp file
Complete list of 2cuf.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 2CUF
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-18
HEADER DNA BINDING PROTEIN 26-MAY-05 2CUF
COMPND MOL_ID: 1; MOLECULE: FLJ21616 PROTEIN; CHAIN: A; FRAGMENT: HOMEOBOX DO
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: HOMO SAPIENS; ORGANISM_COMMON: HUMAN;
AUTHOR S.OHNISHI,T.KIGAWA,T.TOMIZAWA,S.KOSHIBA,M.INOUE,S.YOKOYAMA, RIKEN STRU
DBREF 2CUF A 8 89 UNP Q9H701 Q9H701_HUMAN 196 277
SEQLENGTH 95
NCHAIN 1 chain(s) in 2CUF data set
NALIGN 105
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : D3ZD60_RAT 0.99 0.99 9 91 269 351 83 0 0 405 D3ZD60 Protein Hmbox1 OS=Rattus norvegicus GN=Hmbox1 PE=3 SV=1
2 : D4AEJ7_RAT 0.99 0.99 9 91 269 351 83 0 0 419 D4AEJ7 Protein Hmbox1 OS=Rattus norvegicus GN=Hmbox1 PE=3 SV=1
3 : E5RGZ2_HUMAN 0.99 0.99 9 91 269 351 83 0 0 386 E5RGZ2 Homeobox-containing protein 1 OS=Homo sapiens GN=HMBOX1 PE=3 SV=1
4 : F6VKU0_MACMU 0.99 0.99 9 91 200 282 83 0 0 336 F6VKU0 Uncharacterized protein (Fragment) OS=Macaca mulatta GN=HMBOX1 PE=3 SV=1
5 : F6W5X9_CALJA 0.99 0.99 9 91 269 351 83 0 0 443 F6W5X9 Uncharacterized protein OS=Callithrix jacchus GN=HMBOX1 PE=3 SV=1
6 : G2HDZ3_PANTR 0.99 0.99 9 91 138 220 83 0 0 274 G2HDZ3 Homeobox-containing protein 1 OS=Pan troglodytes PE=2 SV=1
7 : G3SI28_GORGO 0.99 0.99 9 91 269 351 83 0 0 443 G3SI28 Uncharacterized protein OS=Gorilla gorilla gorilla GN=101144726 PE=3 SV=1
8 : G3UJK6_LOXAF 0.99 0.99 9 91 267 349 83 0 0 417 G3UJK6 Uncharacterized protein OS=Loxodonta africana GN=HMBOX1 PE=3 SV=1
9 : G7N0T3_MACMU 0.99 0.99 9 91 269 351 83 0 0 443 G7N0T3 Homeobox-containing protein 1 OS=Macaca mulatta GN=EGK_18814 PE=3 SV=1
10 : G7PD48_MACFA 0.99 0.99 9 91 269 351 83 0 0 443 G7PD48 Homeobox-containing protein 1 OS=Macaca fascicularis GN=EGM_17210 PE=3 SV=1
11 : H0WIG8_OTOGA 0.99 0.99 9 91 269 351 83 0 0 443 H0WIG8 Uncharacterized protein OS=Otolemur garnettii GN=HMBOX1 PE=3 SV=1
12 : H3BK13_MOUSE 0.99 0.99 9 91 269 351 83 0 0 408 H3BK13 Homeobox-containing protein 1 OS=Mus musculus GN=Hmbox1 PE=2 SV=1
13 : H3BK67_MOUSE 0.99 0.99 9 91 269 351 83 0 0 405 H3BK67 Homeobox containing 1, isoform CRA_a OS=Mus musculus GN=Hmbox1 PE=3 SV=1
14 : H3BKF8_MOUSE 0.99 0.99 9 91 270 352 83 0 0 444 H3BKF8 Homeobox-containing protein 1 (Fragment) OS=Mus musculus GN=Hmbox1 PE=3 SV=1
15 : H3BKZ3_MOUSE 0.99 0.99 9 91 85 167 83 0 0 219 H3BKZ3 Homeobox-containing protein 1 (Fragment) OS=Mus musculus GN=Hmbox1 PE=2 SV=1
16 : HMBX1_MOUSE 0.99 0.99 9 91 269 351 83 0 0 419 Q8BJA3 Homeobox-containing protein 1 OS=Mus musculus GN=Hmbox1 PE=2 SV=1
17 : K7GF76_PELSI 0.99 0.99 9 91 270 352 83 0 0 454 K7GF76 Uncharacterized protein OS=Pelodiscus sinensis GN=HMBOX1 PE=3 SV=1
18 : L8HUY4_9CETA 0.99 0.99 9 91 269 351 83 0 0 443 L8HUY4 Homeobox-containing protein 1 OS=Bos mutus GN=M91_15874 PE=3 SV=1
19 : M3XPR1_MUSPF 0.99 0.99 9 91 269 351 83 0 0 443 M3XPR1 Uncharacterized protein OS=Mustela putorius furo GN=HMBOX1 PE=3 SV=1
20 : R0LCJ8_ANAPL 0.99 0.99 9 91 262 344 83 0 0 435 R0LCJ8 Homeobox-containing protein 1 (Fragment) OS=Anas platyrhynchos GN=Anapl_15209 PE=3 SV=1
21 : R7VN96_COLLI 0.99 0.99 9 91 262 344 83 0 0 435 R7VN96 Homeobox-containing protein 1 (Fragment) OS=Columba livia GN=A306_14168 PE=3 SV=1
22 : U3BNX7_CALJA 0.99 0.99 9 91 269 351 83 0 0 419 U3BNX7 Homeobox-containing protein 1 OS=Callithrix jacchus GN=HMBOX1 PE=2 SV=1
23 : W5NGE0_LEPOC 0.99 0.99 9 91 267 349 83 0 0 418 W5NGE0 Uncharacterized protein OS=Lepisosteus oculatus PE=3 SV=1
24 : V8PDM3_OPHHA 0.94 0.98 9 89 258 338 81 0 0 348 V8PDM3 Homeobox-containing protein 1 (Fragment) OS=Ophiophagus hannah GN=HMBOX1 PE=3 SV=1
25 : D2HAJ3_AILME 0.93 0.93 9 91 261 344 84 1 1 412 D2HAJ3 Putative uncharacterized protein (Fragment) OS=Ailuropoda melanoleuca GN=PANDA_007456 PE=3 SV=1
26 : D3DSU2_HUMAN 0.93 0.93 9 91 269 352 84 1 1 406 D3DSU2 Homeobox containing 1, isoform CRA_c OS=Homo sapiens GN=HMBOX1 PE=2 SV=1
27 : D3ZER1_RAT 0.93 0.93 9 91 269 352 84 1 1 404 D3ZER1 Protein Hmbox1 OS=Rattus norvegicus GN=Hmbox1 PE=3 SV=1
28 : E1BZ53_CHICK 0.93 0.93 9 91 270 353 84 1 1 421 E1BZ53 Uncharacterized protein (Fragment) OS=Gallus gallus PE=3 SV=2
29 : E2QW55_CANFA 0.93 0.93 9 91 269 352 84 1 1 406 E2QW55 Uncharacterized protein OS=Canis familiaris GN=HMBOX1 PE=3 SV=2
30 : E2QW57_CANFA 0.93 0.93 9 91 266 349 84 1 1 417 E2QW57 Uncharacterized protein (Fragment) OS=Canis familiaris GN=HMBOX1 PE=3 SV=2
31 : F1N4C1_BOVIN 0.93 0.93 9 91 269 352 84 1 1 420 F1N4C1 Uncharacterized protein OS=Bos taurus GN=HMBOX1 PE=3 SV=2
32 : F1RJQ0_PIG 0.93 0.93 9 91 257 340 84 1 1 417 F1RJQ0 Uncharacterized protein OS=Sus scrofa GN=HMBOX1 PE=3 SV=2
33 : F1RJQ1_PIG 0.93 0.93 9 91 269 352 84 1 1 420 F1RJQ1 Uncharacterized protein (Fragment) OS=Sus scrofa GN=HMBOX1 PE=3 SV=2
34 : F6RFE9_MONDO 0.93 0.93 9 91 269 352 84 1 1 420 F6RFE9 Uncharacterized protein OS=Monodelphis domestica GN=HMBOX1 PE=3 SV=1
35 : F6V2F8_HORSE 0.93 0.93 9 91 257 338 83 1 1 406 F6V2F8 Uncharacterized protein OS=Equus caballus GN=HMBOX1 PE=3 SV=1
36 : F6VLH7_MACMU 0.93 0.93 9 91 264 347 84 1 1 415 F6VLH7 Uncharacterized protein (Fragment) OS=Macaca mulatta GN=HMBOX1 PE=3 SV=1
37 : F6W5C3_CALJA 0.93 0.93 9 91 269 352 84 1 1 420 F6W5C3 Homeobox-containing protein 1 OS=Callithrix jacchus GN=HMBOX1 PE=2 SV=1
38 : G1MC46_AILME 0.93 0.93 9 91 269 352 84 1 1 444 G1MC46 Uncharacterized protein (Fragment) OS=Ailuropoda melanoleuca GN=HMBOX1 PE=3 SV=1
39 : G1P9C9_MYOLU 0.93 0.93 9 91 261 344 84 1 1 412 G1P9C9 Uncharacterized protein (Fragment) OS=Myotis lucifugus GN=HMBOX1 PE=3 SV=1
40 : G1S444_NOMLE 0.93 0.93 9 91 269 352 84 1 1 420 G1S444 Uncharacterized protein OS=Nomascus leucogenys GN=HMBOX1 PE=3 SV=1
41 : G1TD86_RABIT 0.93 0.93 9 91 269 352 84 1 1 420 G1TD86 Uncharacterized protein OS=Oryctolagus cuniculus GN=HMBOX1 PE=3 SV=2
42 : G3QEZ1_GORGO 0.93 0.93 9 91 269 352 84 1 1 420 G3QEZ1 Uncharacterized protein OS=Gorilla gorilla gorilla GN=101144726 PE=3 SV=1
43 : G3TSJ2_LOXAF 0.93 0.93 9 91 269 352 84 1 1 420 G3TSJ2 Uncharacterized protein (Fragment) OS=Loxodonta africana GN=HMBOX1 PE=3 SV=1
44 : G3WUJ1_SARHA 0.93 0.93 9 91 269 352 84 1 1 420 G3WUJ1 Uncharacterized protein OS=Sarcophilus harrisii GN=HMBOX1 PE=3 SV=1
45 : G5AMH2_HETGA 0.93 0.93 9 91 232 313 83 1 1 381 G5AMH2 Homeobox-containing protein 1 OS=Heterocephalus glaber GN=GW7_15150 PE=3 SV=1
46 : H0YKJ1_HUMAN 0.93 0.93 9 91 269 352 84 1 1 396 H0YKJ1 Homeobox-containing protein 1 OS=Homo sapiens GN=HMBOX1 PE=2 SV=1
47 : H0ZSX0_TAEGU 0.93 0.93 9 91 270 353 84 1 1 399 H0ZSX0 Uncharacterized protein OS=Taeniopygia guttata GN=HMBOX1 PE=3 SV=1
48 : H2PPY3_PONAB 0.93 0.93 9 91 269 352 84 1 1 420 H2PPY3 Uncharacterized protein OS=Pongo abelii GN=HMBOX1 PE=3 SV=1
49 : H2RB06_PANTR 0.93 0.93 9 91 269 352 84 1 1 420 H2RB06 Homeobox containing 1 OS=Pan troglodytes GN=HMBOX1 PE=2 SV=1
50 : H3BKM3_MOUSE 0.93 0.93 9 91 269 352 84 1 1 420 H3BKM3 Homeobox-containing protein 1 OS=Mus musculus GN=Hmbox1 PE=2 SV=1
51 : H3BL55_MOUSE 0.93 0.93 9 91 269 352 84 1 1 416 H3BL55 Homeobox-containing protein 1 OS=Mus musculus GN=Hmbox1 PE=2 SV=2
52 : H9EQB5_MACMU 0.93 0.93 9 91 269 352 84 1 1 420 H9EQB5 Homeobox-containing protein 1 OS=Macaca mulatta GN=HMBOX1 PE=2 SV=1
53 : H9GG29_ANOCA 0.93 0.93 9 91 272 353 83 1 1 444 H9GG29 Uncharacterized protein OS=Anolis carolinensis GN=HMBOX1 PE=3 SV=2
54 : HMBX1_HUMAN 2CUF 0.93 0.93 9 91 269 352 84 1 1 420 Q6NT76 Homeobox-containing protein 1 OS=Homo sapiens GN=HMBOX1 PE=1 SV=1
55 : J9NSF5_CANFA 0.93 0.93 9 91 269 352 84 1 1 420 J9NSF5 Uncharacterized protein OS=Canis familiaris GN=HMBOX1 PE=3 SV=1
56 : K9IXP8_DESRO 0.93 0.93 9 91 269 352 84 1 1 420 K9IXP8 Putative homeobox-containing protein 1 OS=Desmodus rotundus PE=2 SV=1
57 : L5L371_PTEAL 0.93 0.93 9 91 257 340 84 1 1 408 L5L371 Homeobox-containing protein 1 OS=Pteropus alecto GN=PAL_GLEAN10016566 PE=3 SV=1
58 : M3WW43_FELCA 0.93 0.93 9 91 269 352 84 1 1 420 M3WW43 Uncharacterized protein OS=Felis catus GN=HMBOX1 PE=3 SV=1
59 : M3XCJ7_FELCA 0.93 0.93 9 91 270 353 84 1 1 421 M3XCJ7 Uncharacterized protein OS=Felis catus GN=HMBOX1 PE=3 SV=1
60 : M7BKI8_CHEMY 0.93 0.93 9 91 196 279 84 1 1 347 M7BKI8 Homeobox-containing protein 1 OS=Chelonia mydas GN=UY3_10309 PE=3 SV=1
61 : Q6DD14_XENLA 0.93 0.93 9 91 256 337 83 1 1 405 Q6DD14 MGC80451 protein OS=Xenopus laevis GN=hmbox1 PE=2 SV=1
62 : Q6DDW0_XENLA 0.93 0.93 9 91 256 337 83 1 1 361 Q6DDW0 MGC81685 protein OS=Xenopus laevis GN=hmbox1 PE=2 SV=1
63 : S7N7J3_MYOBR 0.93 0.93 9 91 182 265 84 1 1 333 S7N7J3 Homeobox-containing protein 1 OS=Myotis brandtii GN=D623_10012332 PE=3 SV=1
64 : S9WZ64_9CETA 0.93 0.93 9 91 232 313 83 1 1 381 S9WZ64 Homeobox-containing protein 1 isoform 2 OS=Camelus ferus GN=CB1_000535012 PE=3 SV=1
65 : U3IEE6_ANAPL 0.93 0.93 9 91 267 350 84 1 1 418 U3IEE6 Uncharacterized protein (Fragment) OS=Anas platyrhynchos GN=HMBOX1 PE=3 SV=1
66 : U3K8H7_FICAL 0.93 0.93 9 91 270 353 84 1 1 455 U3K8H7 Uncharacterized protein OS=Ficedula albicollis GN=HMBOX1 PE=3 SV=1
67 : U6DK41_NEOVI 0.93 0.93 9 91 269 352 84 1 1 376 U6DK41 Homeobox-containing protein 1 (Fragment) OS=Neovison vison GN=HMBX1 PE=2 SV=1
68 : W5NGE1_LEPOC 0.93 0.93 9 91 279 362 84 1 1 431 W5NGE1 Uncharacterized protein (Fragment) OS=Lepisosteus oculatus PE=3 SV=1
69 : W5Q098_SHEEP 0.93 0.93 9 91 269 352 84 1 1 420 W5Q098 Uncharacterized protein OS=Ovis aries GN=HMBOX1 PE=3 SV=1
70 : F1RBW1_DANRE 0.92 0.93 9 91 281 362 83 1 1 441 F1RBW1 Uncharacterized protein OS=Danio rerio GN=hmbox1a PE=3 SV=1
71 : H0VIH1_CAVPO 0.92 0.92 9 91 269 352 84 1 1 420 H0VIH1 Uncharacterized protein OS=Cavia porcellus GN=HMBOX1 PE=3 SV=1
72 : Q4V904_DANRE 0.92 0.93 9 91 281 362 83 1 1 441 Q4V904 Homeobox containing 1 OS=Danio rerio GN=hmbox1a PE=2 SV=1
73 : G3NKD8_GASAC 0.90 0.93 9 91 295 378 84 1 1 448 G3NKD8 Uncharacterized protein OS=Gasterosteus aculeatus PE=3 SV=1
74 : G3NKE3_GASAC 0.90 0.93 9 91 283 366 84 1 1 445 G3NKE3 Uncharacterized protein OS=Gasterosteus aculeatus PE=3 SV=1
75 : H2MNM8_ORYLA 0.90 0.93 9 91 289 372 84 1 1 395 H2MNM8 Uncharacterized protein (Fragment) OS=Oryzias latipes GN=LOC101162016 PE=3 SV=1
76 : H2MNN0_ORYLA 0.90 0.93 9 91 267 350 84 1 1 373 H2MNN0 Uncharacterized protein (Fragment) OS=Oryzias latipes GN=LOC101162016 PE=3 SV=1
77 : H2SDC3_TAKRU 0.90 0.93 9 91 285 368 84 1 1 438 H2SDC3 Uncharacterized protein (Fragment) OS=Takifugu rubripes PE=3 SV=1
78 : H2SDC4_TAKRU 0.90 0.93 9 91 294 377 84 1 1 456 H2SDC4 Uncharacterized protein OS=Takifugu rubripes PE=3 SV=1
79 : H2SDC5_TAKRU 0.90 0.93 9 91 302 385 84 1 1 425 H2SDC5 Uncharacterized protein (Fragment) OS=Takifugu rubripes PE=3 SV=1
80 : I3IYI8_ORENI 0.90 0.93 9 91 296 379 84 1 1 449 I3IYI8 Uncharacterized protein (Fragment) OS=Oreochromis niloticus GN=LOC100697764 PE=3 SV=1
81 : M3ZHV7_XIPMA 0.90 0.93 9 91 292 375 84 1 1 454 M3ZHV7 Uncharacterized protein OS=Xiphophorus maculatus PE=3 SV=1
82 : F1R1N8_DANRE 0.89 0.93 9 91 284 367 84 1 1 437 F1R1N8 Uncharacterized protein (Fragment) OS=Danio rerio GN=hmbox1b PE=3 SV=1
83 : H2MHL9_ORYLA 0.89 0.92 9 91 267 350 84 1 1 436 H2MHL9 Uncharacterized protein OS=Oryzias latipes PE=3 SV=1
84 : G3PPM5_GASAC 0.87 0.90 9 91 253 336 84 1 1 421 G3PPM5 Uncharacterized protein OS=Gasterosteus aculeatus PE=3 SV=1
85 : I3J4L6_ORENI 0.87 0.90 9 91 279 362 84 1 1 439 I3J4L6 Uncharacterized protein OS=Oreochromis niloticus GN=LOC100699346 PE=3 SV=1
86 : V9KLB0_CALMI 0.87 0.98 9 91 83 165 83 0 0 235 V9KLB0 Homeobox-containing protein 1 (Fragment) OS=Callorhynchus milii PE=2 SV=1
87 : H2SSZ9_TAKRU 0.86 0.92 9 91 278 361 84 1 1 434 H2SSZ9 Uncharacterized protein (Fragment) OS=Takifugu rubripes GN=LOC101075164 PE=3 SV=1
88 : M4AB55_XIPMA 0.86 0.91 9 91 276 360 85 2 2 431 M4AB55 Uncharacterized protein (Fragment) OS=Xiphophorus maculatus PE=3 SV=1
89 : V9L4I6_CALMI 0.85 0.92 9 91 151 234 84 1 1 303 V9L4I6 Homeobox-containing protein 1 OS=Callorhynchus milii PE=2 SV=1
90 : V9L800_CALMI 0.85 0.92 9 91 157 240 84 1 1 319 V9L800 Homeobox-containing protein 1 (Fragment) OS=Callorhynchus milii PE=2 SV=1
91 : V9LBH5_CALMI 0.85 0.92 9 91 151 234 84 1 1 262 V9LBH5 Homeobox-containing protein 1 OS=Callorhynchus milii PE=2 SV=1
92 : V9LBJ8_CALMI 0.85 0.92 9 91 162 245 84 1 1 268 V9LBJ8 Homeobox-containing protein 1 (Fragment) OS=Callorhynchus milii PE=2 SV=1
93 : H3AT66_LATCH 0.82 0.91 8 91 247 331 85 1 1 399 H3AT66 Uncharacterized protein OS=Latimeria chalumnae PE=3 SV=1
94 : H3D2X4_TETNG 0.82 0.91 9 91 268 352 85 2 2 375 H3D2X4 Uncharacterized protein (Fragment) OS=Tetraodon nigroviridis PE=3 SV=1
95 : W5M1G3_LEPOC 0.80 0.90 9 91 245 328 84 1 1 397 W5M1G3 Uncharacterized protein (Fragment) OS=Lepisosteus oculatus PE=3 SV=1
96 : H2ST00_TAKRU 0.76 0.82 9 82 232 315 84 2 10 393 H2ST00 Uncharacterized protein (Fragment) OS=Takifugu rubripes GN=LOC101075164 PE=3 SV=1
97 : H2N309_ORYLA 0.67 0.76 8 82 274 362 89 2 14 364 H2N309 Uncharacterized protein (Fragment) OS=Oryzias latipes PE=3 SV=1
98 : Q4S040_TETNG 0.58 0.67 8 92 265 369 108 2 26 443 Q4S040 Chromosome 21 SCAF14785, whole genome shotgun sequence OS=Tetraodon nigroviridis GN=GSTENG00026203001 PE=3 SV=1
99 : Q4H3K0_CIOIN 0.56 0.78 8 90 98 184 87 2 4 301 Q4H3K0 Transcription factor protein (Fragment) OS=Ciona intestinalis GN=Ci-FLJ21616-related PE=2 SV=1
100 : T1EIR0_HELRO 0.42 0.64 8 79 1 73 73 1 1 73 T1EIR0 Uncharacterized protein (Fragment) OS=Helobdella robusta GN=HELRODRAFT_138036 PE=3 SV=1
101 : V5H731_IXORI 0.40 0.67 11 95 3 89 87 1 2 89 V5H731 Putative homeobox (Fragment) OS=Ixodes ricinus PE=2 SV=1
102 : Q5DM48_BOVIN 0.33 0.55 8 84 8 90 83 3 6 91 Q5DM48 Hepatocyte nuclear factor 1 beta (Fragment) OS=Bos taurus PE=2 SV=1
103 : U3JZH3_FICAL 0.32 0.48 11 95 139 211 88 3 18 213 U3JZH3 Uncharacterized protein (Fragment) OS=Ficedula albicollis GN=GSC2 PE=3 SV=1
104 : T1GCR6_MEGSC 0.31 0.45 8 95 16 88 88 2 15 113 T1GCR6 Uncharacterized protein OS=Megaselia scalaris PE=3 SV=1
105 : G3W250_SARHA 0.30 0.46 8 87 74 140 82 3 17 152 G3W250 Uncharacterized protein (Fragment) OS=Sarcophilus harrisii GN=GSC2 PE=3 SV=1
## ALIGNMENTS 1 - 70
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A G 0 0 112 1 0
2 2 A S - 0 0 127 1 0
3 3 A S S S+ 0 0 107 1 0
4 4 A G S S- 0 0 58 1 0
5 5 A S S S+ 0 0 77 1 0
6 6 A S + 0 0 52 1 0
7 7 A G + 0 0 28 1 0
8 8 A R - 0 0 196 9 0
9 9 A G - 0 0 59 104 52 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
10 10 A S - 0 0 100 104 47 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
11 11 A R S S+ 0 0 224 106 0 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
12 12 A F - 0 0 40 106 33 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
13 13 A T - 0 0 65 106 31 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
14 14 A W - 0 0 65 106 5 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
15 15 A R > - 0 0 113 106 48 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
16 16 A K H > S+ 0 0 161 106 46 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
17 17 A E H > S+ 0 0 107 106 31 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
18 18 A C H > S+ 0 0 1 106 61 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
19 19 A L H X S+ 0 0 39 106 17 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
20 20 A A H X S+ 0 0 59 106 56 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
21 21 A V H X S+ 0 0 26 106 36 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
22 22 A M H X S+ 0 0 0 106 7 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMM
23 23 A E H X S+ 0 0 106 106 15 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
24 24 A S H X S+ 0 0 76 106 59 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
25 25 A Y H X S+ 0 0 45 106 41 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
26 26 A F H < S+ 0 0 21 106 1 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
27 27 A N H < S+ 0 0 139 106 67 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
28 28 A E H < S+ 0 0 122 106 39 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEED
29 29 A N < - 0 0 60 106 25 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
30 30 A Q S S+ 0 0 81 106 31 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
31 31 A Y S S- 0 0 137 106 10 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
32 32 A P - 0 0 6 106 0 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
33 33 A D > - 0 0 84 106 15 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
34 34 A E H > S+ 0 0 150 106 55 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
35 35 A A H > S+ 0 0 62 106 59 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
36 36 A K H > S+ 0 0 41 106 45 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
37 37 A R H X S+ 0 0 52 106 0 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
38 38 A E H X S+ 0 0 103 106 0 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
39 39 A E H X S+ 0 0 130 106 25 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
40 40 A I H X S+ 0 0 0 106 12 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
41 41 A A H X S+ 0 0 1 106 18 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
42 42 A N H X S+ 0 0 103 106 46 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
43 43 A A H X S+ 0 0 35 106 51 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
44 44 A C H X S+ 0 0 0 106 24 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
45 45 A N H X S+ 0 0 20 106 17 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
46 46 A A H < S+ 0 0 64 103 50 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
47 47 A V H < S+ 0 0 69 103 33 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
48 48 A I H < S+ 0 0 16 103 20 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
49 49 A Q < - 0 0 76 103 12 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
50 50 A K > - 0 0 119 103 23 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
51 51 A P T 3 S+ 0 0 126 103 12 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
52 52 A G T 3 S+ 0 0 76 103 17 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
53 53 A K < - 0 0 110 103 35 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
54 54 A K - 0 0 164 103 41 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
55 55 A L - 0 0 57 106 11 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
56 56 A S >> - 0 0 70 106 42 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
57 57 A D T 34 S+ 0 0 121 103 21 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
58 58 A L T 34 S+ 0 0 82 103 52 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
59 59 A E T <4 S+ 0 0 42 103 11 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
60 60 A R < - 0 0 125 103 25 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
61 61 A V - 0 0 1 103 0 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
62 62 A T > - 0 0 51 103 17 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
63 63 A S H > S+ 0 0 45 106 68 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
64 64 A L H > S+ 0 0 101 106 58 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
65 65 A K H > S+ 0 0 46 106 34 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
66 66 A V H X S+ 0 0 0 106 2 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
67 67 A Y H X S+ 0 0 105 106 56 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
68 68 A N H X S+ 0 0 98 106 33 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
69 69 A W H X S+ 0 0 46 106 0 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
70 70 A F H X S+ 0 0 0 106 0 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
71 71 A A H X S+ 0 0 25 106 33 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
72 72 A N H X S+ 0 0 48 106 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
73 73 A R H X S+ 0 0 119 106 3 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
74 74 A R H X S+ 0 0 21 106 0 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
75 75 A K H X S+ 0 0 99 106 23 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
76 76 A E H X S+ 0 0 89 106 29 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
77 77 A I H X S+ 0 0 53 106 65 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
78 78 A K H X S+ 0 0 124 106 18 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
79 79 A R H X S+ 0 0 158 106 32 RRRRRRRRRRRRRRRRRRRRRRRRrrrrrrrrrrRrrrrrrrrrRrrrrrrrRrrrrrrrRRrRrrrrrR
80 80 A R H < S+ 0 0 182 96 75 RRRRRRRRRRRRRRRRRRRRRRRRaaaaaaaaaa.aaaaaaaaa.aaaaaaa.aaaaaaa..a.aaaaa.
81 81 A A H < S+ 0 0 90 104 71 AAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNRNNNNNNNNNRNNNNNNNRNNNNNNNRRNRNNNNNR
82 82 A N H < S- 0 0 104 104 90 NNNNNNNNNNNNNNNNNNNNNNNNIIIIIIIIIIAIIIIIIIIIAIIIIIIIAIIIIIIIAAIAIIIIIA
83 83 A I < + 0 0 108 103 83 IIIIIIIIIIIIIIIIIIIIIIIIEEEEEEEEEENEEEEEEEEENEEEEEEENEEEEEEENNENEEEEEN
84 84 A A + 0 0 91 103 33 AAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAIAAAAAAAAAIAAAAAAAIAAAAAAAIIAIAAAAAI
85 85 A A + 0 0 70 102 42 AAAAAAAAAAAAAAAAAAAAAAANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
86 86 A I + 0 0 165 102 40 IIIIIIIIIIIIIIIIIIIIIIIVIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
87 87 A L S S- 0 0 160 102 31 LLLLLLLLLLLLLLLLLLLLLLLSLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
88 88 A E + 0 0 177 101 35 EEEEEEEEEEEEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
89 89 A S - 0 0 108 101 35 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
90 90 A S + 0 0 125 100 45 HHHHHHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
91 91 A G - 0 0 50 99 28 GGGGGGGGGGGGGGGGGGGGGGG GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
92 92 A P + 0 0 131 5 67
93 93 A S - 0 0 71 4 59
94 94 A S 0 0 109 4 75
95 95 A G 0 0 99 4 0
## ALIGNMENTS 71 - 105
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....8....:....9....:....0....:....1....:....2....:....3....:....4
1 1 A G 0 0 112 1 0
2 2 A S - 0 0 127 1 0
3 3 A S S S+ 0 0 107 1 0
4 4 A G S S- 0 0 58 1 0
5 5 A S S S+ 0 0 77 1 0
6 6 A S + 0 0 52 1 0
7 7 A G + 0 0 28 1 0
8 8 A R - 0 0 196 9 0 R RRRR R RR
9 9 A G - 0 0 59 104 52 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGR R RR
10 10 A S - 0 0 100 104 47 SSSSSSSSSSSSSSSSSSSSSSSSSSSSAE N IH
11 11 A R S S+ 0 0 224 106 0 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
12 12 A F - 0 0 40 106 33 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFTTT
13 13 A T - 0 0 65 106 31 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTVTKITI
14 14 A W - 0 0 65 106 5 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWFFWFFF
15 15 A R > - 0 0 113 106 48 RRRRRRRRRRRRRRRRRRRRRRRRRRRRPRKGTTS
16 16 A K H > S+ 0 0 161 106 46 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKPSPESE
17 17 A E H > S+ 0 0 107 106 31 EEEEEEEEEEEEEEEEEEEEEEEEEEEEENAAEIE
18 18 A C H > S+ 0 0 1 106 61 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHSQQQ
19 19 A L H X S+ 0 0 39 106 17 LLLLLLLLLLLLLLLLLLLLLLLLLLQQLLLQLLL
20 20 A A H X S+ 0 0 59 106 56 AAAAAAAAAAAAAAATAASSSSSASASSSDAQQKQ
21 21 A V H X S+ 0 0 26 106 36 VVVVVVVVVVVVVVVVVVVVVVVVVVIIILVIAEA
22 22 A M H X S+ 0 0 0 106 7 MMMMMMMMMMMMMMMMMMMMMMMMMMMMLLLLLLL
23 23 A E H X S+ 0 0 106 106 15 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEYEEE
24 24 A S H X S+ 0 0 76 106 59 SSSSSSSSSSSSSSGSSSSSSSSSSrrrNKRQTRA
25 25 A Y H X S+ 0 0 45 106 41 YYYYYYYYYYYYYYYYFYYYYYYFFfffYCYALAL
26 26 A F H < S+ 0 0 21 106 1 FFFFFFFFFFFFFFFFFFFFFFFFFFFFYFYYFFF
27 27 A N H < S+ 0 0 139 106 67 NNNNNNNNNNNSSINHSSGGGGVSISMLNAEDHQL
28 28 A E H < S+ 0 0 122 106 39 GDDDDDDDDDDDEDDEDDEEEEEDEDEEAERRQEQ
29 29 A N < - 0 0 60 106 25 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNEDQNTN
30 30 A Q S S+ 0 0 81 106 31 QQQQQQQQQQQQQQQQQQQQQQQQQQQQSNPKQHQ
31 31 A Y S S- 0 0 137 106 10 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYNYYY
32 32 A P - 0 0 6 106 0 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
33 33 A D > - 0 0 84 106 15 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDSDSDDD
34 34 A E H > S+ 0 0 150 106 55 EEEEEEEEEEEEEEEEEEEEEEEEEEEEELAKVIV
35 35 A A H > S+ 0 0 62 106 59 AAAAAAAAAAAAASAAAAAAAAAASAAACRQEVYV
36 36 A K H > S+ 0 0 41 106 45 KKKKKKKKKKKKKKKKKKKKKKKKKKKRKRTETTA
37 37 A R H X S+ 0 0 52 106 0 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
38 38 A E H X S+ 0 0 103 106 0 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
39 39 A E H X S+ 0 0 130 106 25 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEQAHEH
40 40 A I H X S+ 0 0 0 106 12 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIILLIL
41 41 A A H X S+ 0 0 1 106 18 AAAAAAAAAAAAAAASAAAAAAAAAAAAAAVVAAA
42 42 A N H X S+ 0 0 103 106 46 NNNNNNNNNNNNTTTNATNNNNNASANNHREENIN
43 43 A A H X S+ 0 0 35 106 51 AAAAAAAAAAAAAAAAAAAAAAAAAAAAATEERKR
44 44 A C H X S+ 0 0 0 106 24 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCIII
45 45 A N H X S+ 0 0 20 106 17 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNnHDH
46 46 A A H < S+ 0 0 64 103 50 AAAAAAAAAAAAAAAASATTTTASTSSCALEe...
47 47 A V H < S+ 0 0 69 103 33 VVVVVVVVVVVVVVVVVVVVVVVVVVVVITAC...
48 48 A I H < S+ 0 0 16 103 20 IIIIIIIIIIIIIIIVIIIIIIIVIIIIITVL...
49 49 A Q < - 0 0 76 103 12 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQEEQ...
50 50 A K > - 0 0 119 103 23 KKKKKKKKKKKKKKKKKkKKKKKkKKKKsrRr...
51 51 A P T 3 S+ 0 0 126 103 12 PPPPPPPPPPPPPPPPPaPPPPPaPPPPptPp...
52 52 A G T 3 S+ 0 0 76 103 17 GGGGGGGGGGGGGGEGGGGGGGGGGGGGGGES...
53 53 A K < - 0 0 110 103 35 KKKKKKKKKKKKKKKKKKKKKKAKCKCCSRRK...
54 54 A K - 0 0 164 103 41 KKKKKKKKKKKKKKKKKKKKKKKKKKKKMPPA...
55 55 A L - 0 0 57 106 11 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHLLL
56 56 A S >> - 0 0 70 106 42 SSSSSSSSSSSSSSSTSSSSSSSSSSSSTSTgKTK
57 57 A D T 34 S+ 0 0 121 103 21 DDDDDDDDDDDDDDDEDDEEEEEDEDEEEDEg...
58 58 A L T 34 S+ 0 0 82 103 52 LLLLLLLLLLLLLLLTLLFFFFFLFLFFLKRS...
59 59 A E T <4 S+ 0 0 42 103 11 EEEEEEEEEEEEEEEEEEEEEEEEEEEEDEEN...
60 60 A R < - 0 0 125 103 25 RRRRRRRRRRRRRRRRRRRRRRRRRRRRKRKL...
61 61 A V - 0 0 1 103 0 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV...
62 62 A T > - 0 0 51 103 17 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTGST...
63 63 A S H > S+ 0 0 45 106 68 SSSSSSSSSSSSSSSPSSPPPPASASAATVLEEEE
64 64 A L H > S+ 0 0 101 106 58 LLLLLLLLLLLLLLLLLLLLLLLLLLLLVHPVEAE
65 65 A K H > S+ 0 0 46 106 34 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKTVRRRR
66 66 A V H X S+ 0 0 0 106 2 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVIVVVVV
67 67 A Y H X S+ 0 0 105 106 56 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYSNYEQE
68 68 A N H X S+ 0 0 98 106 33 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNVVV
69 69 A W H X S+ 0 0 46 106 0 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
70 70 A F H X S+ 0 0 0 106 0 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
71 71 A A H X S+ 0 0 25 106 33 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAANAKQK
72 72 A N H X S+ 0 0 48 106 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
73 73 A R H X S+ 0 0 119 106 3 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRKRRRRR
74 74 A R H X S+ 0 0 21 106 0 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRrRR
75 75 A K H X S+ 0 0 99 106 23 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKrAA
76 76 A E H X S+ 0 0 89 106 29 EEEEEEEEEEEEDDDEDDEEEEEDEDEEDDEEHKK
77 77 A I H X S+ 0 0 53 106 65 IIIIIIIIIIIIIIIIIIMMMMLIMIMMDLAEQFW
78 78 A K H X S+ 0 0 124 106 18 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKAKRR
79 79 A R H X S+ 0 0 158 106 32 rRrrrrrrrrrrrrrKrrrrrrrrrrrRrKkFRKh
80 80 A R H < S+ 0 0 182 96 75 a.aaaaaaaaaaaaaRaaaaaaaaaaa.h rRAQr
81 81 A A H < S+ 0 0 90 104 71 NRNNNNNNNNNNNNNANNNNNNNNNNN.I QQTEA
82 82 A N H < S- 0 0 104 104 90 IAIIIIIIIIIIIIINIIIIIIIIIII.E QKARS
83 83 A I < + 0 0 108 103 83 ENEEEEEEEEEEEEEIEEEEEEEEE RH HLSIA
84 84 A A + 0 0 91 103 33 AIAAAAAAAAAAAAAAAAAAAAAAA AV AAASS
85 85 A A + 0 0 70 102 42 AATTTTTTTTTTAAAAAAAAAAAAA NE A LKA
86 86 A I + 0 0 165 102 40 IIIIIIIIIIIIIIIIIIIIIIMII IA A IQL
87 87 A L S S- 0 0 160 102 31 LLLLLLLLLLLLLLLLLLLLLLLLL GM M LKI
88 88 A E + 0 0 177 101 35 EEEEEEEEEEEEEEEEEEEEEEEEE ED A QV
89 89 A S - 0 0 108 101 35 SSSSSSSSSSSSSSSTSSSSSSNSS EQ A PS
90 90 A S + 0 0 125 100 45 HHHHHHHHHHHHHHHHHHHHHHHHH PH A KS
91 91 A G - 0 0 50 99 28 GGGGGGGGGGGGGGGGGGGGGGGGG G A QS
92 92 A P + 0 0 131 5 67 G S PT
93 93 A S - 0 0 71 4 59 A PS
94 94 A S 0 0 109 4 75 S QN
95 95 A G 0 0 99 4 0 G GG
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
2 2 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
3 3 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
4 4 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
5 5 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
6 6 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
7 7 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
8 8 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 9 0 0 0.000 0 1.00
9 9 A 0 0 0 0 0 0 0 96 0 0 0 0 0 0 4 0 0 0 0 0 104 0 0 0.163 5 0.48
10 10 A 0 0 1 0 0 0 0 0 1 0 95 0 0 1 0 0 0 1 1 0 104 0 0 0.270 9 0.52
11 11 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 106 0 0 0.000 0 1.00
12 12 A 0 0 0 0 97 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 106 0 0 0.129 4 0.67
13 13 A 1 0 2 0 0 0 0 0 0 0 0 96 0 0 0 1 0 0 0 0 106 0 0 0.200 6 0.69
14 14 A 0 0 0 0 5 95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 106 0 0 0.190 6 0.94
15 15 A 0 0 0 0 0 0 0 1 0 1 1 2 0 0 94 1 0 0 0 0 106 0 0 0.306 10 0.52
16 16 A 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 94 0 2 0 0 106 0 0 0.280 9 0.53
17 17 A 0 0 1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 96 1 0 106 0 0 0.200 6 0.69
18 18 A 0 0 0 0 0 0 0 0 0 0 1 0 94 2 0 0 3 0 0 0 106 0 0 0.275 9 0.39
19 19 A 0 97 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 106 0 0 0.129 4 0.83
20 20 A 0 0 0 0 0 0 0 0 86 0 8 1 0 0 0 1 3 0 0 1 106 0 0 0.573 19 0.43
21 21 A 92 1 4 0 0 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 106 0 0 0.359 11 0.64
22 22 A 0 7 0 93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 106 0 0 0.243 8 0.92
23 23 A 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 98 0 1 106 0 0 0.107 3 0.84
24 24 A 0 0 0 0 0 0 0 1 1 0 90 1 0 0 5 1 1 0 1 0 106 0 3 0.506 16 0.41
25 25 A 0 2 0 0 6 0 90 0 2 0 0 0 1 0 0 0 0 0 0 0 106 0 0 0.455 15 0.59
26 26 A 0 0 0 0 97 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 106 0 0 0.129 4 0.98
27 27 A 1 2 2 1 0 0 0 4 1 0 6 0 0 2 0 0 1 1 79 1 106 0 0 0.959 32 0.33
28 28 A 0 0 0 0 0 0 0 1 1 0 0 0 0 0 2 0 2 77 0 17 106 0 0 0.737 24 0.61
29 29 A 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 1 96 1 106 0 0 0.213 7 0.74
30 30 A 0 0 0 0 0 0 0 0 0 1 1 0 0 1 0 1 95 0 1 0 106 0 0 0.266 8 0.68
31 31 A 0 0 0 0 0 0 99 0 0 0 0 0 0 0 0 0 0 0 1 0 106 0 0 0.053 1 0.90
32 32 A 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 106 0 0 0.000 0 1.00
33 33 A 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 98 106 0 0 0.094 3 0.84
34 34 A 2 1 1 0 0 0 0 0 1 0 0 0 0 0 0 1 0 94 0 0 106 0 0 0.306 10 0.45
35 35 A 2 0 0 0 0 0 1 0 92 0 2 0 1 0 1 0 1 1 0 0 106 0 0 0.451 15 0.41
36 36 A 0 0 0 0 0 0 0 0 1 0 0 3 0 0 2 93 0 1 0 0 106 0 0 0.328 10 0.54
37 37 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 106 0 0 0.000 0 1.00
38 38 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 106 0 0 0.000 0 1.00
39 39 A 0 0 0 0 0 0 0 0 1 0 0 0 0 2 0 0 1 96 0 0 106 0 0 0.200 6 0.74
40 40 A 0 3 97 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 106 0 0 0.129 4 0.87
41 41 A 2 0 0 0 0 0 0 0 97 0 1 0 0 0 0 0 0 0 0 0 106 0 0 0.147 4 0.82
42 42 A 0 0 1 0 0 0 0 0 3 0 1 4 0 1 1 0 0 2 88 0 106 0 0 0.590 19 0.54
43 43 A 0 0 0 0 0 0 0 0 94 0 0 1 0 0 2 1 0 2 0 0 106 0 0 0.293 9 0.48
44 44 A 0 0 3 0 0 0 0 0 0 0 0 0 97 0 0 0 0 0 0 0 106 0 0 0.129 4 0.76
45 45 A 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 97 1 106 3 1 0.147 4 0.83
46 46 A 0 1 0 0 0 0 0 0 87 0 4 5 1 0 0 0 0 2 0 0 103 0 0 0.557 18 0.49
47 47 A 96 0 1 0 0 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 103 0 0 0.218 7 0.66
48 48 A 3 1 95 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 103 0 0 0.240 8 0.79
49 49 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 98 2 0 0 103 0 0 0.096 3 0.88
50 50 A 0 0 0 0 0 0 0 0 0 0 1 0 0 0 3 96 0 0 0 0 103 0 5 0.186 6 0.76
51 51 A 0 0 0 0 0 0 0 0 2 97 0 1 0 0 0 0 0 0 0 0 103 0 0 0.150 5 0.88
52 52 A 0 0 0 0 0 0 0 97 0 0 1 0 0 0 0 0 0 2 0 0 103 0 0 0.150 5 0.83
53 53 A 0 0 0 0 0 0 0 0 1 0 1 0 3 0 2 93 0 0 0 0 103 0 0 0.335 11 0.64
54 54 A 0 0 0 1 0 0 0 0 1 2 0 0 0 0 0 96 0 0 0 0 103 0 0 0.205 6 0.59
55 55 A 0 99 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 106 0 0 0.053 1 0.89
56 56 A 0 0 0 0 0 0 0 1 0 0 93 4 0 0 0 2 0 0 0 0 106 3 1 0.306 10 0.58
57 57 A 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 11 0 88 103 0 0 0.393 13 0.79
58 58 A 0 88 0 0 8 0 0 0 0 0 1 1 0 0 1 1 0 0 0 0 103 0 0 0.488 16 0.47
59 59 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 98 1 1 103 0 0 0.109 3 0.89
60 60 A 0 1 0 0 0 0 0 0 0 0 0 0 0 0 97 2 0 0 0 0 103 0 0 0.150 5 0.74
61 61 A 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 103 0 0 0.000 0 1.00
62 62 A 0 0 0 0 0 0 0 1 0 0 1 98 0 0 0 0 0 0 0 0 103 0 0 0.109 3 0.82
63 63 A 1 1 0 0 0 0 0 0 4 5 85 1 0 0 0 0 0 4 0 0 106 0 0 0.662 22 0.32
64 64 A 2 93 0 0 0 0 0 0 1 1 0 0 0 1 0 0 0 2 0 0 106 0 0 0.346 11 0.42
65 65 A 1 0 0 0 0 0 0 0 0 0 0 1 0 0 4 94 0 0 0 0 106 0 0 0.267 8 0.66
66 66 A 99 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 106 0 0 0.053 1 0.98
67 67 A 0 0 0 0 0 0 95 0 0 0 1 0 0 0 0 0 1 2 1 0 106 0 0 0.253 8 0.43
68 68 A 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 97 0 106 0 0 0.129 4 0.67
69 69 A 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 106 0 0 0.000 0 1.00
70 70 A 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 106 0 0 0.000 0 1.00
71 71 A 0 0 0 0 0 0 0 0 96 0 0 0 0 0 0 2 1 0 1 0 106 0 0 0.200 6 0.66
72 72 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 106 0 0 0.000 0 1.00
73 73 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 99 1 0 0 0 0 106 0 0 0.053 1 0.96
74 74 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 106 0 1 0.000 0 1.00
75 75 A 0 0 0 0 0 0 0 0 2 0 0 0 0 0 1 97 0 0 0 0 106 0 0 0.147 4 0.77
76 76 A 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 2 0 89 0 8 106 0 0 0.435 14 0.71
77 77 A 0 2 86 7 1 1 0 0 1 0 0 0 0 0 0 0 1 1 0 1 106 0 0 0.649 21 0.34
78 78 A 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2 97 0 0 0 0 106 0 0 0.147 4 0.81
79 79 A 0 0 0 0 1 0 0 0 0 0 0 0 0 1 94 4 0 0 0 0 106 9 67 0.267 8 0.67
80 80 A 0 0 0 0 0 0 0 0 68 0 0 0 0 1 30 0 1 0 0 0 96 0 0 0.721 24 0.25
81 81 A 0 0 1 0 0 0 0 0 26 0 0 1 0 0 8 0 2 1 62 0 104 0 0 1.056 35 0.28
82 82 A 0 0 62 0 0 0 0 0 9 0 1 0 0 0 1 1 1 1 25 0 104 0 0 1.080 36 0.10
83 83 A 0 1 26 0 0 0 0 0 1 0 1 0 0 2 1 0 0 60 8 0 103 0 0 1.112 37 0.16
84 84 A 1 0 8 0 0 0 0 1 88 0 2 0 0 0 0 0 0 0 0 0 103 0 0 0.474 15 0.67
85 85 A 0 1 0 0 0 0 0 0 85 0 0 10 0 0 0 1 0 1 2 0 102 0 0 0.576 19 0.57
86 86 A 1 1 94 1 0 0 0 0 2 0 0 0 0 0 0 0 1 0 0 0 102 0 0 0.316 10 0.60
87 87 A 0 94 1 2 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 0 102 0 0 0.316 10 0.69
88 88 A 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 95 0 2 101 0 0 0.263 8 0.65
89 89 A 0 0 0 0 0 0 0 0 1 1 94 1 0 0 0 0 1 1 1 0 101 0 0 0.332 11 0.64
90 90 A 0 0 0 0 0 0 0 0 1 1 2 0 0 95 0 1 0 0 0 0 100 0 0 0.265 8 0.54
91 91 A 0 0 0 0 0 0 0 97 1 0 1 0 0 0 0 0 1 0 0 0 99 0 0 0.169 5 0.72
92 92 A 0 0 0 0 0 0 0 20 0 40 20 20 0 0 0 0 0 0 0 0 5 0 0 1.332 44 0.32
93 93 A 0 0 0 0 0 0 0 0 25 25 50 0 0 0 0 0 0 0 0 0 4 0 0 1.040 34 0.40
94 94 A 0 0 0 0 0 0 0 0 0 0 50 0 0 0 0 0 25 0 25 0 4 0 0 1.040 34 0.24
95 95 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0.000 0 1.00
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
25 72 332 1 rRa
26 72 340 1 rRa
27 72 340 1 rRa
28 72 341 1 rRa
29 72 340 1 rRa
30 72 337 1 rRa
31 72 340 1 rRa
32 72 328 1 rRa
33 72 340 1 rRa
34 72 340 1 rRa
36 72 335 1 rRa
37 72 340 1 rRa
38 72 340 1 rRa
39 72 332 1 rRa
40 72 340 1 rRa
41 72 340 1 rRa
42 72 340 1 rRa
43 72 340 1 rRa
44 72 340 1 rRa
46 72 340 1 rRa
47 72 341 1 rRa
48 72 340 1 rRa
49 72 340 1 rRa
50 72 340 1 rRa
51 72 340 1 rRa
52 72 340 1 rRa
54 72 340 1 rRa
55 72 340 1 rRa
56 72 340 1 rRa
57 72 328 1 rRa
58 72 340 1 rRa
59 72 341 1 rRa
60 72 267 1 rRa
63 72 253 1 rRa
65 72 338 1 rRa
66 72 341 1 rRa
67 72 340 1 rRa
68 72 350 1 rRa
69 72 340 1 rRa
71 72 340 1 rRa
73 72 366 1 rRa
74 72 354 1 rRa
75 72 360 1 rRa
76 72 338 1 rRa
77 72 356 1 rRa
78 72 365 1 rRa
79 72 373 1 rRa
80 72 367 1 rRa
81 72 363 1 rRa
82 72 355 1 rRa
83 72 338 1 rRa
84 72 324 1 rRa
85 72 350 1 rRa
87 72 349 1 rRa
88 43 318 1 kPa
88 72 348 1 rRa
89 72 222 1 rRa
90 72 228 1 rRa
91 72 222 1 rRa
92 72 233 1 rRa
93 73 319 1 rRa
94 43 310 1 kPa
94 72 340 1 rRa
95 72 316 1 rRa
96 17 248 9 rCVCLLCVYSf
96 72 312 1 rRa
97 18 291 13 rGRCLTWWMSFCHSf
97 73 359 1 rRa
98 18 282 23 rCAAASGCGPLGRADWLCVCGSRSf
99 44 141 2 sQKp
99 73 172 2 rRRh
100 44 44 1 rIt
101 70 72 2 kQLr
102 39 46 2 nRAe
102 44 53 3 rGVSp
102 50 62 1 gLg
103 50 188 3 rAKWr
105 58 131 2 hQKr
//