Complet list of 2cto hssp file
Complete list of 2cto.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 2CTO
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-17
HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 24-MAY-05 2CTO
COMPND MOL_ID: 1; MOLECULE: NOVEL PROTEIN; CHAIN: A; FRAGMENT: HMG BOX LIKE D
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: HOMO SAPIENS; ORGANISM_COMMON: HUMAN;
AUTHOR T.TOMIZAWA,T.KIGAWA,M.SATO,S.KOSHIBA,M.INOUE,Y.O.KAMATARI, S.YOKOYAMA,
DBREF 2CTO A 8 87 UNP Q96JY0 Q96JY0_HUMAN 1 80
SEQLENGTH 93
NCHAIN 1 chain(s) in 2CTO data set
NALIGN 46
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : MAEL_HUMAN 2CTO 0.94 0.97 8 93 1 86 86 0 0 434 Q96JY0 Protein maelstrom homolog OS=Homo sapiens GN=MAEL PE=1 SV=1
2 : G3HE74_CRIGR 0.93 1.00 8 82 1 75 75 0 0 172 G3HE74 Protein maelstrom-like OS=Cricetulus griseus GN=I79_008850 PE=4 SV=1
3 : L8YE98_TUPCH 0.93 0.99 8 82 1 75 75 0 0 242 L8YE98 Protein maelstrom like protein OS=Tupaia chinensis GN=TREES_T100021986 PE=4 SV=1
4 : F7B842_MACMU 0.92 0.97 8 93 1 86 86 0 0 434 F7B842 Protein maelstrom homolog OS=Macaca mulatta GN=MAEL PE=2 SV=1
5 : G3RA07_GORGO 0.92 0.97 8 93 1 86 86 0 0 437 G3RA07 Uncharacterized protein OS=Gorilla gorilla gorilla GN=101131399 PE=4 SV=1
6 : G7NU39_MACFA 0.92 0.97 8 93 1 86 86 0 0 434 G7NU39 Putative uncharacterized protein OS=Macaca fascicularis GN=EGM_01672 PE=4 SV=1
7 : H2N4W0_PONAB 0.92 0.97 8 93 1 86 86 0 0 434 H2N4W0 Uncharacterized protein OS=Pongo abelii GN=MAEL PE=4 SV=1
8 : MAEL_MACFA 0.92 0.97 8 93 1 86 86 0 0 434 Q4R786 Protein maelstrom homolog OS=Macaca fascicularis GN=MAEL PE=2 SV=1
9 : G1RXJ4_NOMLE 0.91 0.97 8 93 1 86 86 0 0 434 G1RXJ4 Uncharacterized protein OS=Nomascus leucogenys GN=MAEL PE=4 SV=1
10 : G3TNX2_LOXAF 0.91 0.95 8 93 1 86 86 0 0 438 G3TNX2 Uncharacterized protein OS=Loxodonta africana GN=MAEL PE=4 SV=1
11 : F7DRD9_HORSE 0.90 0.93 8 93 1 86 86 0 0 434 F7DRD9 Uncharacterized protein OS=Equus caballus GN=MAEL PE=4 SV=1
12 : G2HIP6_PANTR 0.90 0.97 8 93 1 86 86 0 0 434 G2HIP6 Maelstrom homolog OS=Pan troglodytes PE=2 SV=1
13 : H0WWQ3_OTOGA 0.90 0.94 8 93 1 86 86 0 0 436 H0WWQ3 Uncharacterized protein OS=Otolemur garnettii GN=MAEL PE=4 SV=1
14 : H2R8G1_PANTR 0.90 0.97 8 93 1 86 86 0 0 434 H2R8G1 Uncharacterized protein OS=Pan troglodytes GN=MAEL PE=4 SV=1
15 : F1S251_PIG 0.89 0.98 8 88 1 81 81 0 0 143 F1S251 Uncharacterized protein OS=Sus scrofa PE=4 SV=2
16 : F1MMI4_BOVIN 0.88 0.95 8 93 1 86 86 0 0 420 F1MMI4 Protein maelstrom homolog OS=Bos taurus GN=MAEL PE=4 SV=1
17 : L8HRU4_9CETA 0.88 0.95 8 93 1 86 86 0 0 434 L8HRU4 Protein maelstrom-like protein OS=Bos mutus GN=M91_13684 PE=4 SV=1
18 : M3YW65_MUSPF 0.88 0.95 8 93 1 86 86 0 0 434 M3YW65 Uncharacterized protein OS=Mustela putorius furo GN=MAEL PE=4 SV=1
19 : MAEL_BOVIN 0.88 0.95 8 93 1 86 86 0 0 420 Q32KV2 Protein maelstrom homolog OS=Bos taurus GN=MAEL PE=2 SV=1
20 : W5PQL8_SHEEP 0.88 0.95 8 93 1 86 86 0 0 437 W5PQL8 Uncharacterized protein OS=Ovis aries GN=MAEL PE=4 SV=1
21 : F7ICG6_CALJA 0.87 0.95 8 93 1 86 86 0 0 434 F7ICG6 Uncharacterized protein OS=Callithrix jacchus GN=MAEL PE=4 SV=1
22 : I3MPR1_SPETR 0.87 0.94 8 93 1 86 86 0 0 437 I3MPR1 Uncharacterized protein OS=Spermophilus tridecemlineatus GN=MAEL PE=4 SV=1
23 : M3WB55_FELCA 0.87 0.94 8 93 1 86 86 0 0 437 M3WB55 Uncharacterized protein OS=Felis catus GN=MAEL PE=4 SV=1
24 : D3ZG86_RAT 0.86 0.94 8 93 1 86 86 0 0 434 D3ZG86 Maelstrom homolog (Drosophila) (Predicted) OS=Rattus norvegicus GN=Mael PE=4 SV=1
25 : F6V302_CANFA 0.86 0.94 8 93 1 86 86 0 0 434 F6V302 Uncharacterized protein OS=Canis familiaris GN=MAEL PE=4 SV=1
26 : G5AQ42_HETGA 0.86 0.93 8 93 1 86 86 0 0 207 G5AQ42 Maelstrom-like protein OS=Heterocephalus glaber GN=GW7_21160 PE=4 SV=1
27 : MAEL_MOUSE 0.86 0.94 8 93 1 86 86 0 0 434 Q8BVN9 Protein maelstrom homolog OS=Mus musculus GN=Mael PE=1 SV=1
28 : I3LGW5_PIG 0.85 0.94 15 93 1 79 79 0 0 344 I3LGW5 Protein maelstrom homolog (Fragment) OS=Sus scrofa GN=MAEL PE=4 SV=1
29 : D2HX64_AILME 0.84 0.94 8 93 1 86 86 0 0 434 D2HX64 Putative uncharacterized protein (Fragment) OS=Ailuropoda melanoleuca GN=PANDA_017187 PE=4 SV=1
30 : G1KZH0_AILME 0.84 0.94 8 93 1 86 86 0 0 437 G1KZH0 Uncharacterized protein OS=Ailuropoda melanoleuca GN=MAEL PE=4 SV=1
31 : G1SPT1_RABIT 0.84 0.91 8 93 1 87 87 1 1 435 G1SPT1 Uncharacterized protein OS=Oryctolagus cuniculus GN=MAEL PE=4 SV=2
32 : MAEL_PIG 0.84 0.94 8 93 1 86 86 0 0 434 A4UTQ0 Protein maelstrom homolog OS=Sus scrofa GN=MAEL PE=2 SV=1
33 : G1P1N3_MYOLU 0.81 0.92 8 93 1 86 86 0 0 437 G1P1N3 Uncharacterized protein OS=Myotis lucifugus GN=MAEL PE=4 SV=1
34 : F7BVW2_MONDO 0.78 0.93 8 89 1 82 82 0 0 435 F7BVW2 Uncharacterized protein OS=Monodelphis domestica GN=MAEL PE=4 SV=1
35 : H0V4J5_CAVPO 0.77 0.91 8 93 1 86 86 0 0 411 H0V4J5 Uncharacterized protein OS=Cavia porcellus GN=MAEL PE=4 SV=1
36 : L5LTW1_MYODS 0.64 0.74 8 93 79 148 86 1 16 530 L5LTW1 Protein maelstrom like protein OS=Myotis davidii GN=MDA_GLEAN10013497 PE=4 SV=1
37 : K7FSA6_PELSI 0.60 0.82 8 92 1 84 85 1 1 410 K7FSA6 Uncharacterized protein OS=Pelodiscus sinensis GN=MAEL PE=4 SV=1
38 : R4GC38_ANOCA 0.55 0.74 3 88 49 131 86 1 3 461 R4GC38 Uncharacterized protein OS=Anolis carolinensis GN=LOC100563988 PE=4 SV=1
39 : V8NPC6_OPHHA 0.51 0.76 8 90 1 82 83 1 1 321 V8NPC6 Protein maelstrom-like protein (Fragment) OS=Ophiophagus hannah GN=MAEL PE=4 SV=1
40 : H0ZTG5_TAEGU 0.45 0.65 8 91 1 82 84 1 2 352 H0ZTG5 Uncharacterized protein OS=Taeniopygia guttata GN=MAEL PE=4 SV=1
41 : U3JFR1_FICAL 0.45 0.65 8 92 1 83 85 1 2 410 U3JFR1 Uncharacterized protein OS=Ficedula albicollis GN=MAEL PE=4 SV=1
42 : E1C5I1_CHICK 0.41 0.67 8 90 1 80 83 1 3 409 E1C5I1 Uncharacterized protein OS=Gallus gallus GN=MAEL PE=4 SV=2
43 : G1NNP4_MELGA 0.40 0.67 8 93 1 86 86 0 0 440 G1NNP4 Uncharacterized protein OS=Meleagris gallopavo GN=MAEL PE=4 SV=2
44 : U3IGF2_ANAPL 0.38 0.63 8 93 1 83 86 1 3 408 U3IGF2 Uncharacterized protein OS=Anas platyrhynchos GN=MAEL PE=4 SV=1
45 : A2EGT7_TRIVA 0.34 0.53 14 83 2 70 70 1 1 94 A2EGT7 HMG box family protein OS=Trichomonas vaginalis GN=TVAG_302620 PE=4 SV=1
46 : V4AYE1_LOTGI 0.30 0.55 11 91 3 84 82 1 1 573 V4AYE1 Uncharacterized protein OS=Lottia gigantea GN=LOTGIDRAFT_158312 PE=4 SV=1
## ALIGNMENTS 1 - 46
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A G 0 0 125 1 0
2 2 A S + 0 0 136 1 0
3 3 A S - 0 0 106 2 0 S
4 4 A G - 0 0 77 2 60 S
5 5 A S + 0 0 129 2 73 P
6 6 A S + 0 0 83 2 86 K
7 7 A G - 0 0 46 2 66 E
8 8 A M - 0 0 158 44 0 MMMMMMMMMMMMMMMMMMMMMMMMMMM MMMMMMMMMMMMMMMM
9 9 A P + 0 0 123 44 44 PPPPPPPPPPPPPPPPPPPPPPPPPPP PPPPPPPPPPAEASSS
10 10 A N - 0 0 119 44 54 NNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNRLRRC
11 11 A R - 0 0 209 45 41 RRRRRRRRRRRRRRRRRRRRRRRRRRR RRRRRRRRRRCRRSSS K
12 12 A K - 0 0 127 45 50 KRRKKKKKKKKKRKRRRRRRKRRRRRR RRRRKRRKKKRGGQQR K
13 13 A A S S+ 0 0 93 45 60 AAAAAAAAAAAPAPGAAAAAAATAAAA AAAGAAAAGKGGGRRG P
14 14 A S S S- 0 0 45 46 62 SSSSSSSSSSSSSSSSSSSSSSSSSSS SSSSTSSTAVSRCSYFPA
15 15 A R - 0 0 108 47 12 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRPKR
16 16 A N >> - 0 0 55 47 39 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSSSSSSN
17 17 A A H 3> S+ 0 0 7 47 19 AAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAAAAAAGAAAAPPA
18 18 A Y H 3> S+ 0 0 56 47 2 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYFYFFYYYYF
19 19 A Y H <> S+ 0 0 60 47 31 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYFYSSYYYIY
20 20 A F H X S+ 0 0 26 47 11 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFYCFFLFF
21 21 A F H < S+ 0 0 7 47 0 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFY
22 22 A V H >X S+ 0 0 0 47 29 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVTVVVVACM
23 23 A Q H 3< S+ 0 0 82 47 59 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQLQQLLLHRRRRQK
24 24 A E T 3< S+ 0 0 132 47 11 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEDDDEE
25 25 A K T <> S+ 0 0 39 47 40 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKKKKQQRRQKL
26 26 A I H X S+ 0 0 30 47 49 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIMMILILLLLLLRE
27 27 A P H > S+ 0 0 72 47 0 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
28 28 A E H > S+ 0 0 105 47 48 EEEEEEEEEEEEEEEEEEEEEEEEEEEEDDEEEEEEEDEEQVVKQS
29 29 A L H X>S+ 0 0 12 47 5 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLVL
30 30 A R H <5S+ 0 0 145 47 47 RRRRRRRRRRRRRRRRRRRRRRRRRRRRQQRRRRRRQRKEEQQQKR
31 31 A R H <5S+ 0 0 232 47 40 RRRRRRRRRRGRRRRRRRRRRRRRRRRRRRRRRRRRRRQRRQQQEK
32 32 A R H <5S- 0 0 199 47 38 RRRRRRRRRRRRRRRRRRRRQRRRRRRRRRRRRRRRRRQRRRRCEE
33 33 A G T <5S+ 0 0 60 47 7 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNG
34 34 A L < - 0 0 66 47 26 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLPR
35 35 A P + 0 0 93 46 30 PPPPPPPPPPPPPPPPPPPPRPPPPPPPPPPPPPP.PAAPPPPPGV
36 36 A V + 0 0 2 46 12 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV.VVVVVVVVIF
37 37 A A S S+ 0 0 76 46 32 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATT.SGTAAATAAP
38 38 A R S >> S- 0 0 157 45 38 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR.RGSRRRRC.n
39 39 A V H 3> S+ 0 0 14 46 26 VVVVVVVVVVVVVVVVVVVVVVVVIVVVVVVVVVV.VVVMMVVVFm
40 40 A A H 34 S+ 0 0 33 46 27 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAPAAAA.PAAAAVVAGA
41 41 A D H <> S+ 0 0 66 46 10 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDED.DEKDDDDDDD
42 42 A A H < S+ 0 0 0 46 29 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA.AAAAAGGAIV
43 43 A I T >< S+ 0 0 47 46 27 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII.IIIVVFFIAV
44 44 A P G >4 S+ 0 0 72 46 10 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP.PPPPPPPPKP
45 45 A Y G 3< S+ 0 0 107 46 55 YYHYYYYYYYYYYYYYYYYYYYYYYYYYYYYYHFH.LYYYYHHHKV
46 46 A C G <> S+ 0 0 2 46 51 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC.CCCCCLLCLA
47 47 A S H <> S+ 0 0 61 46 43 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS.SSSCSTTAGH
48 48 A S H > S+ 0 0 97 46 68 SAAAAAAAAAAASAAAAAAATAAAAAAAAAAAAAA.QDDNQQQKEP
49 49 A D H >> S+ 0 0 71 46 49 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDE.DDAAAEEDMR
50 50 A W H >< S+ 0 0 27 46 0 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW.WWWWWWWWWW
51 51 A A H 3< S+ 0 0 48 47 42 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAPEAAEEAAAKK
52 52 A L H << S+ 0 0 129 47 52 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLALSSLLLNS
53 53 A L S << S- 0 0 28 47 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
54 54 A R >> - 0 0 178 47 78 RRRRRRRRRRRRRRRKKRKKRRRRKRRRRRRRSRRSTSNTTTATSP
55 55 A E H 3> S+ 0 0 178 47 14 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEQEEQEEEEEVEEEE
56 56 A E H 3> S+ 0 0 117 47 17 EDEEEEEEEEEEEEEEEEEEEEEDEEDEEEEEDEEDDDEEEEEEES
57 57 A E H <> S+ 0 0 61 47 8 EEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEQQEEEEEEE
58 58 A K H X S+ 0 0 47 47 8 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRRKKK
59 59 A E H X S+ 0 0 124 47 58 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEGATMMMKD
60 60 A K H X S+ 0 0 110 47 66 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKVVFFAPR
61 61 A Y H X S+ 0 0 48 47 0 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYF
62 62 A A H X S+ 0 0 27 47 41 ASAAAAAAAAAAAASAAAAAATASASSSAAASAASAAAAAAAANME
63 63 A E H X S+ 0 0 111 47 12 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEEDEEEEEEEEES
64 64 A M H X S+ 0 0 73 47 36 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMKKKKRMM
65 65 A A H X S+ 0 0 0 47 0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
66 66 A R H X S+ 0 0 185 47 33 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRQQQEK
67 67 A E H X S+ 0 0 74 47 54 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAEEAKQQTKKKKKE
68 68 A W H X S+ 0 0 106 47 21 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWDY
69 69 A R H X S+ 0 0 106 47 47 RRRRRRRRRRRKRKKRRRRRRRRRRRRKRRKKRKRRRKKNNNNKKK
70 70 A A H X S+ 0 0 49 47 42 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAASSEEKEA
71 71 A A H X S+ 0 0 8 47 70 AAAAAAAAAAAAAAAAAAAAAAAAAAAAVVAAATAAEKTKKKKKAR
72 72 A Q H < S+ 0 0 82 47 58 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQKTKKKKKKHM
73 73 A G H < S+ 0 0 54 47 64 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGSSSRRSSSKR
74 74 A K H < S+ 0 0 168 47 76 KKKKKKKKKKKKKKKKKRKKRKKKRKKKKKKKKKKKTEESSLFQNG
75 75 A D < - 0 0 96 47 60 DDDDDDDDDDDDDDDDDDDDDDDDDEDDEEDDEAEEHVVQQQQKDV
76 76 A P S S+ 0 0 130 47 75 PSSSSSSSSSASSSASSASSSSSSFPSAAATASPSSAAVKKKKTPE
77 77 A G S S- 0 0 28 47 54 GGGGGGGGGGRGGGGGGGGGGGGGGGGGGGGGGSGGSAATTAAKKG
78 78 A P + 0 0 115 47 67 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPSPAAEVEAEKED
79 79 A S + 0 0 53 47 72 SSSSSSSSSSSSSSWSSSSSSSSSSSSWSSLWSPSSKKKKEKKEEK
80 80 A E + 0 0 191 47 53 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEGEELSPETEEVKH
81 81 A K + 0 0 133 47 68 KKKKKKKKNKKKKKKKKKKKKKKKKTKKKKKKKKMKPPRVCMVFKK
82 82 A Q - 0 0 138 47 63 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPSRNNLKQSM
83 83 A K - 0 0 140 45 63 K KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKTKKNEEAVNTMKD
84 84 A P + 0 0 122 44 64 P PPPPPPPPPPPPPPPPPPLPLPLLPPPpPPPLPQVVAPNQP N
85 85 A V + 0 0 84 37 37 V VVVVVVVVVVVVVVVVVVVFVVVVVVVvVVVAV......K. I
86 86 A F + 0 0 194 39 82 F FFFFFFSSFSFSCCSCCFSSSSSSSSSSSCPSCI.L...G. G
87 87 A T + 0 0 126 41 60 T TTTTTTTTTMTTTTTTTTTTTTTTTTTITTTTTS.VND.A. N
88 88 A S + 0 0 112 44 36 P PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPTPPPPPGPPPN I
89 89 A G S S- 0 0 51 42 26 L LLLLLLLLLLL LLLLLLLLLLLLLMMLLLLLLV FMVVLL I
90 90 A P - 0 0 125 41 67 R RRRRRRRRRRR RRRRRRRRRRRRRRRRRR RRP PPPPVD S
91 91 A S + 0 0 127 39 69 R KRKRKKRRRRR KKWKKRRRRQKRRQQRRK RKT SA SQ K
92 92 A S 0 0 113 37 17 P PPPPPPPSPPP PPPPPPPPPPPPPPPPPP PPP P AP
93 93 A G 0 0 130 35 18 G GGGGGGGGGGG GGGGGDGGGGGGAGGGAG GG GA
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
2 2 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
3 3 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 2 0 0 0.000 0 1.00
4 4 A 0 0 0 0 0 0 0 50 0 0 50 0 0 0 0 0 0 0 0 0 2 0 0 0.693 23 0.40
5 5 A 0 0 0 0 0 0 0 0 0 50 50 0 0 0 0 0 0 0 0 0 2 0 0 0.693 23 0.27
6 6 A 0 0 0 0 0 0 0 0 0 0 50 0 0 0 0 50 0 0 0 0 2 0 0 0.693 23 0.13
7 7 A 0 0 0 0 0 0 0 50 0 0 0 0 0 0 0 0 0 50 0 0 2 0 0 0.693 23 0.33
8 8 A 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44 0 0 0.000 0 1.00
9 9 A 0 0 0 0 0 0 0 0 5 86 7 0 0 0 0 0 0 2 0 0 44 0 0 0.536 17 0.55
10 10 A 0 2 0 0 0 0 0 0 0 0 0 0 2 0 7 0 0 0 89 0 44 0 0 0.462 15 0.45
11 11 A 0 0 0 0 0 0 0 0 0 0 7 0 2 0 89 2 0 0 0 0 45 0 0 0.454 15 0.58
12 12 A 0 0 0 0 0 0 0 4 0 0 0 0 0 0 51 40 4 0 0 0 45 0 0 0.986 32 0.49
13 13 A 0 0 0 0 0 0 0 16 69 7 0 2 0 0 4 2 0 0 0 0 45 0 0 1.034 34 0.40
14 14 A 2 0 0 0 2 0 2 0 4 2 78 4 2 0 2 0 0 0 0 0 46 0 0 0.964 32 0.37
15 15 A 0 0 0 0 0 0 0 0 0 2 0 0 0 0 96 2 0 0 0 0 47 0 0 0.205 6 0.88
16 16 A 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 87 0 47 0 0 0.382 12 0.60
17 17 A 0 0 0 0 0 0 0 6 89 4 0 0 0 0 0 0 0 0 0 0 47 0 0 0.410 13 0.80
18 18 A 0 0 0 0 9 0 91 0 0 0 0 0 0 0 0 0 0 0 0 0 47 0 0 0.291 9 0.98
19 19 A 0 0 2 0 2 0 91 0 0 0 4 0 0 0 0 0 0 0 0 0 47 0 0 0.380 12 0.68
20 20 A 0 2 0 0 94 0 2 0 0 0 0 0 2 0 0 0 0 0 0 0 47 0 0 0.308 10 0.88
21 21 A 0 0 0 0 98 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 47 0 0 0.103 3 0.99
22 22 A 91 0 0 2 0 0 0 0 2 0 0 2 2 0 0 0 0 0 0 0 47 0 0 0.409 13 0.70
23 23 A 0 9 0 0 0 0 0 0 0 0 0 0 0 2 9 2 79 0 0 0 47 0 0 0.772 25 0.41
24 24 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 91 0 9 47 0 0 0.291 9 0.89
25 25 A 0 2 0 0 0 0 0 0 0 0 0 0 0 0 6 85 6 0 0 0 47 0 0 0.570 19 0.60
26 26 A 0 15 77 4 0 0 0 0 0 0 0 0 0 0 2 0 0 2 0 0 47 0 0 0.786 26 0.50
27 27 A 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 47 0 0 0.000 0 1.00
28 28 A 4 0 0 0 0 0 0 0 0 0 2 0 0 0 0 2 4 81 0 6 47 0 0 0.780 26 0.51
29 29 A 2 98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47 0 0 0.103 3 0.95
30 30 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 79 4 13 4 0 0 47 0 0 0.720 24 0.52
31 31 A 0 0 0 0 0 0 0 2 0 0 0 0 0 0 85 2 9 2 0 0 47 0 0 0.593 19 0.59
32 32 A 0 0 0 0 0 0 0 0 0 0 0 0 2 0 89 0 4 4 0 0 47 0 0 0.451 15 0.62
33 33 A 0 0 0 0 0 0 0 98 0 0 0 0 0 0 0 0 0 0 2 0 47 0 0 0.103 3 0.92
34 34 A 0 96 0 0 0 0 0 0 0 2 0 0 0 0 2 0 0 0 0 0 47 1 0 0.205 6 0.74
35 35 A 2 0 0 0 0 0 0 2 4 89 0 0 0 0 2 0 0 0 0 0 46 0 0 0.489 16 0.70
36 36 A 96 0 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46 0 0 0.209 6 0.87
37 37 A 0 0 0 0 0 0 0 2 85 2 2 9 0 0 0 0 0 0 0 0 46 1 0 0.602 20 0.68
38 38 A 0 0 0 0 0 0 0 2 0 0 2 0 2 0 91 0 0 0 2 0 45 0 1 0.423 14 0.61
39 39 A 89 0 2 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46 0 0 0.447 14 0.74
40 40 A 4 0 0 0 0 0 0 2 89 4 0 0 0 0 0 0 0 0 0 0 46 0 0 0.458 15 0.73
41 41 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 4 0 93 46 0 0 0.283 9 0.90
42 42 A 2 0 2 0 0 0 0 4 91 0 0 0 0 0 0 0 0 0 0 0 46 0 0 0.386 12 0.70
43 43 A 7 0 87 0 4 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 46 0 0 0.519 17 0.72
44 44 A 0 0 0 0 0 0 0 0 0 98 0 0 0 0 0 2 0 0 0 0 46 0 0 0.105 3 0.90
45 45 A 2 2 0 0 2 0 78 0 0 0 0 0 0 13 0 2 0 0 0 0 46 0 0 0.790 26 0.44
46 46 A 0 7 0 0 0 0 0 0 2 0 0 0 91 0 0 0 0 0 0 0 46 0 0 0.344 11 0.49
47 47 A 0 0 0 0 0 0 0 2 2 0 87 4 2 2 0 0 0 0 0 0 46 0 0 0.591 19 0.57
48 48 A 0 0 0 0 0 0 0 0 70 2 7 2 0 0 0 2 9 2 2 4 46 0 0 1.195 39 0.31
49 49 A 0 0 0 2 0 0 0 0 7 0 0 0 0 0 2 0 0 7 0 83 46 0 0 0.680 22 0.51
50 50 A 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46 0 0 0.000 0 1.00
51 51 A 0 0 0 0 0 0 0 2 85 2 0 0 0 0 0 4 0 6 0 0 47 0 0 0.611 20 0.58
52 52 A 0 89 0 0 0 0 0 0 2 0 6 0 0 0 0 0 0 0 2 0 47 0 0 0.440 14 0.47
53 53 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47 0 0 0.000 0 1.00
54 54 A 0 0 0 0 0 0 0 0 2 2 9 11 0 0 64 11 0 0 2 0 47 0 0 1.219 40 0.21
55 55 A 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 94 0 0 47 0 0 0.278 9 0.86
56 56 A 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 83 0 15 47 0 0 0.520 17 0.82
57 57 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 94 0 2 47 0 0 0.278 9 0.91
58 58 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 96 0 0 0 0 47 0 0 0.176 5 0.92
59 59 A 0 0 0 6 0 0 0 2 2 0 0 2 0 0 0 2 0 83 0 2 47 0 0 0.740 24 0.42
60 60 A 4 0 0 0 4 0 0 0 2 2 0 0 0 0 2 85 0 0 0 0 47 0 0 0.652 21 0.34
61 61 A 0 0 0 0 2 0 98 0 0 0 0 0 0 0 0 0 0 0 0 0 47 0 0 0.103 3 0.99
62 62 A 0 0 0 2 0 0 0 0 74 0 17 2 0 0 0 0 0 2 2 0 47 0 0 0.849 28 0.58
63 63 A 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 94 0 4 47 0 0 0.278 9 0.88
64 64 A 0 0 0 89 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 47 0 0 0.392 13 0.64
65 65 A 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 47 0 0 0.000 0 1.00
66 66 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 89 2 6 2 0 0 47 0 0 0.440 14 0.66
67 67 A 0 0 0 0 0 0 0 0 4 0 0 2 0 0 0 13 4 77 0 0 47 0 0 0.818 27 0.45
68 68 A 0 0 0 0 0 96 2 0 0 0 0 0 0 0 0 0 0 0 0 2 47 0 0 0.205 6 0.79
69 69 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 66 26 0 0 9 0 47 0 0 0.833 27 0.52
70 70 A 0 0 0 0 0 0 0 0 87 0 4 0 0 0 0 2 0 6 0 0 47 0 0 0.511 17 0.58
71 71 A 4 0 0 0 0 0 0 0 74 0 0 4 0 0 2 13 0 2 0 0 47 0 0 0.915 30 0.29
72 72 A 0 0 0 2 0 0 0 0 0 0 0 2 0 2 0 15 79 0 0 0 47 0 0 0.718 23 0.42
73 73 A 0 0 0 0 0 0 0 79 0 0 13 0 0 0 6 2 0 0 0 0 47 0 0 0.709 23 0.36
74 74 A 0 2 0 0 2 0 0 2 0 0 4 2 0 0 6 72 2 4 2 0 47 0 0 1.170 39 0.23
75 75 A 6 0 0 0 0 0 0 0 2 0 0 0 0 2 0 2 9 13 0 66 47 0 0 1.168 38 0.40
76 76 A 2 0 0 0 2 0 0 0 19 11 51 4 0 0 0 9 0 2 0 0 47 0 0 1.488 49 0.24
77 77 A 0 0 0 0 0 0 0 77 9 0 4 4 0 0 2 4 0 0 0 0 47 0 0 0.899 30 0.46
78 78 A 2 0 0 0 0 0 0 0 6 77 2 0 0 0 0 2 0 9 0 2 47 0 0 0.917 30 0.33
79 79 A 0 2 0 0 0 6 0 0 0 2 68 0 0 0 0 15 0 6 0 0 47 0 0 1.060 35 0.28
80 80 A 2 2 0 0 0 0 0 2 0 2 2 2 0 2 0 2 0 83 0 0 47 0 0 0.810 27 0.46
81 81 A 4 0 0 4 2 0 0 0 0 4 0 2 2 0 2 77 0 0 2 0 47 0 0 1.017 33 0.32
82 82 A 0 2 0 2 0 0 0 0 0 2 4 0 0 0 2 2 81 0 4 0 47 0 0 0.850 28 0.37
83 83 A 2 0 0 2 0 0 0 0 2 0 0 4 0 0 0 78 0 4 4 2 45 0 0 0.949 31 0.37
84 84 A 5 11 0 0 0 0 0 0 2 73 0 0 0 0 0 0 5 0 5 0 44 7 1 0.986 32 0.35
85 85 A 89 0 3 0 3 0 0 0 3 0 0 0 0 0 0 3 0 0 0 0 37 0 0 0.492 16 0.62
86 86 A 0 3 3 0 28 0 0 5 0 3 44 0 15 0 0 0 0 0 0 0 39 0 0 1.441 48 0.18
87 87 A 2 0 2 2 0 0 0 0 2 0 2 80 0 0 0 0 0 0 5 2 41 0 0 0.865 28 0.39
88 88 A 0 0 2 0 0 0 0 2 0 89 2 2 0 0 0 0 0 0 2 0 44 0 0 0.537 17 0.64
89 89 A 7 79 2 7 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 42 0 0 0.833 27 0.73
90 90 A 2 0 0 0 0 0 0 0 0 15 2 0 0 0 78 0 0 0 0 2 41 0 0 0.746 24 0.32
91 91 A 0 0 0 0 0 3 0 0 3 0 8 3 0 0 44 31 10 0 0 0 39 0 0 1.437 47 0.31
92 92 A 0 0 0 0 0 0 0 0 3 92 5 0 0 0 0 0 0 0 0 0 37 0 0 0.333 11 0.82
93 93 A 0 0 0 0 0 0 0 89 9 0 0 0 0 0 0 0 0 0 0 3 35 0 0 0.420 14 0.81
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
31 78 78 1 pNv
46 29 31 1 nGm
//