Complet list of 2ct5 hssp file
Complete list of 2ct5.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 2CT5
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-17
HEADER TRANSCRIPTION 23-MAY-05 2CT5
COMPND MOL_ID: 1; MOLECULE: ZINC FINGER BED DOMAIN CONTAINING PROTEIN 1; CHAI
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: HOMO SAPIENS; ORGANISM_COMMON: HUMAN;
AUTHOR K.MIYAMOTO,T.TOMIZAWA,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA, RIKEN STR
DBREF 2CT5 A 8 67 UNP O96006 ZBED1_HUMAN 23 82
SEQLENGTH 73
NCHAIN 1 chain(s) in 2CT5 data set
NALIGN 63
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : C9JXP4_HUMAN 0.98 1.00 8 68 23 83 61 0 0 271 C9JXP4 Zinc finger BED domain-containing protein 1 (Fragment) OS=Homo sapiens GN=ZBED1 PE=2 SV=2
2 : G9KYG4_MUSPF 0.97 1.00 8 68 30 90 61 0 0 230 G9KYG4 Zinc finger, BED-type containing 1 (Fragment) OS=Mustela putorius furo PE=2 SV=1
3 : F6QDB5_MACMU 0.87 0.91 2 70 17 85 69 0 0 694 F6QDB5 DREF-like protein OS=Macaca mulatta GN=ZBED1 PE=2 SV=1
4 : G1SAQ9_NOMLE 0.87 0.91 2 70 17 85 69 0 0 694 G1SAQ9 Uncharacterized protein OS=Nomascus leucogenys GN=ZBED1 PE=4 SV=1
5 : G3R7R6_GORGO 0.87 0.91 2 70 17 85 69 0 0 694 G3R7R6 Uncharacterized protein OS=Gorilla gorilla gorilla GN=101152060 PE=4 SV=1
6 : G7Q243_MACFA 0.87 0.91 2 70 17 85 69 0 0 694 G7Q243 DREF-like protein OS=Macaca fascicularis GN=EGM_18507 PE=4 SV=1
7 : H2PUS8_PONAB 0.87 0.91 2 70 17 85 69 0 0 694 H2PUS8 Uncharacterized protein OS=Pongo abelii GN=ZBED1 PE=4 SV=1
8 : K7B7Q3_PANTR 0.87 0.91 2 70 17 85 69 0 0 694 K7B7Q3 Zinc finger, BED-type containing 1 OS=Pan troglodytes GN=ZBED1 PE=2 SV=1
9 : ZBED1_HUMAN 2CT5 0.87 0.91 2 70 17 85 69 0 0 694 O96006 Zinc finger BED domain-containing protein 1 OS=Homo sapiens GN=ZBED1 PE=1 SV=1
10 : D2HFI5_AILME 0.86 0.91 2 70 17 85 69 0 0 695 D2HFI5 Uncharacterized protein (Fragment) OS=Ailuropoda melanoleuca GN=ZBED1 PE=4 SV=1
11 : F6ZHR0_ORNAN 0.86 0.91 2 70 17 85 69 0 0 696 F6ZHR0 Uncharacterized protein OS=Ornithorhynchus anatinus GN=ZBED1 PE=4 SV=1
12 : F7BRG6_XENTR 0.86 0.91 2 70 17 85 69 0 0 693 F7BRG6 Uncharacterized protein OS=Xenopus tropicalis GN=LOC100495088 PE=4 SV=1
13 : G1KVX3_ANOCA 0.86 0.91 2 70 31 99 69 0 0 736 G1KVX3 Uncharacterized protein OS=Anolis carolinensis GN=ZBED1 PE=4 SV=2
14 : G1NR66_MELGA 0.86 0.91 2 70 17 85 69 0 0 695 G1NR66 Uncharacterized protein OS=Meleagris gallopavo GN=ZBED1 PE=4 SV=1
15 : G3UJL1_LOXAF 0.86 0.91 2 70 17 85 69 0 0 696 G3UJL1 Uncharacterized protein OS=Loxodonta africana GN=ZBED1 PE=4 SV=1
16 : G3WH60_SARHA 0.86 0.91 2 70 17 85 69 0 0 695 G3WH60 Uncharacterized protein OS=Sarcophilus harrisii GN=ZBED1 PE=4 SV=1
17 : K7F1Y0_PELSI 0.86 0.91 2 70 17 85 69 0 0 695 K7F1Y0 Uncharacterized protein OS=Pelodiscus sinensis GN=ZBED1 PE=4 SV=1
18 : M3WH38_FELCA 0.86 0.91 2 70 17 85 69 0 0 694 M3WH38 Uncharacterized protein OS=Felis catus GN=ZBED1 PE=4 SV=1
19 : M7BAI9_CHEMY 0.86 0.91 2 70 17 85 69 0 0 695 M7BAI9 Zinc finger BED domain-containing protein 1 (Fragment) OS=Chelonia mydas GN=UY3_10290 PE=4 SV=1
20 : R4GHD7_CHICK 0.86 0.91 2 70 17 85 69 0 0 695 R4GHD7 Uncharacterized protein OS=Gallus gallus GN=ZBED1 PE=4 SV=1
21 : U3IV96_ANAPL 0.86 0.91 2 70 17 85 69 0 0 695 U3IV96 Uncharacterized protein OS=Anas platyrhynchos GN=ZBED1 PE=4 SV=1
22 : U3KKU4_FICAL 0.86 0.91 2 70 17 85 69 0 0 695 U3KKU4 Uncharacterized protein OS=Ficedula albicollis GN=ZBED1 PE=4 SV=1
23 : F6UD04_XENTR 0.84 0.91 2 70 17 85 69 0 0 693 F6UD04 Uncharacterized protein OS=Xenopus tropicalis GN=zbed1 PE=4 SV=1
24 : G3X7K6_BOVIN 0.84 0.91 2 70 17 85 69 0 0 697 G3X7K6 Uncharacterized protein OS=Bos taurus GN=ZBED1 PE=4 SV=1
25 : L8HYE9_9CETA 0.84 0.91 2 70 17 85 69 0 0 697 L8HYE9 Zinc finger BED domain-containing protein 1 OS=Bos mutus GN=M91_05002 PE=4 SV=1
26 : G1TGG3_RABIT 0.83 0.91 2 70 17 85 69 0 0 705 G1TGG3 Uncharacterized protein OS=Oryctolagus cuniculus GN=ZBED1 PE=4 SV=1
27 : H3AT69_LATCH 0.83 0.91 2 70 17 85 69 0 0 695 H3AT69 Uncharacterized protein OS=Latimeria chalumnae PE=4 SV=1
28 : W5NLL1_LEPOC 0.83 0.91 2 70 17 85 69 0 0 692 W5NLL1 Uncharacterized protein OS=Lepisosteus oculatus GN=ZBED1 PE=4 SV=1
29 : W5PE63_SHEEP 0.82 0.90 2 72 17 87 71 0 0 459 W5PE63 Uncharacterized protein OS=Ovis aries GN=ZBED1 PE=4 SV=1
30 : Q4RY89_TETNG 0.77 0.88 2 70 17 85 69 0 0 455 Q4RY89 Chromosome 3 SCAF14978, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00027094001 PE=4 SV=1
31 : I3JK78_ORENI 0.75 0.90 2 70 17 85 69 0 0 649 I3JK78 Uncharacterized protein OS=Oreochromis niloticus GN=ZBED1 PE=4 SV=1
32 : E9JD34_SOLIN 0.48 0.68 3 67 47 111 66 2 2 727 E9JD34 Putative uncharacterized protein (Fragment) OS=Solenopsis invicta GN=SINV_11715 PE=4 SV=1
33 : H9KAN2_APIME 0.47 0.72 11 68 8 65 58 0 0 98 H9KAN2 Uncharacterized protein OS=Apis mellifera PE=4 SV=1
34 : E2C1W5_HARSA 0.46 0.68 11 73 23 85 63 0 0 536 E2C1W5 Zinc finger BED domain-containing protein 1 OS=Harpegnathos saltator GN=EAI_14672 PE=4 SV=1
35 : F4WLS6_ACREC 0.45 0.68 3 67 15 79 66 2 2 693 F4WLS6 Zinc finger BED domain-containing protein 1 OS=Acromyrmex echinatior GN=G5I_06707 PE=4 SV=1
36 : W4WZB0_ATTCE 0.45 0.68 3 67 48 112 66 2 2 726 W4WZB0 Uncharacterized protein OS=Atta cephalotes PE=4 SV=1
37 : I1FT60_AMPQE 0.43 0.64 4 60 21 81 61 2 4 624 I1FT60 Uncharacterized protein OS=Amphimedon queenslandica PE=4 SV=1
38 : W8CD46_CERCA 0.43 0.61 4 73 20 89 70 0 0 482 W8CD46 Zinc finger BED domain-containing protein 1 OS=Ceratitis capitata GN=ZBED1 PE=2 SV=1
39 : V8P2Y5_OPHHA 0.42 0.65 6 65 280 339 60 0 0 869 V8P2Y5 Putative histone-lysine N-methyltransferase PRDM7 (Fragment) OS=Ophiophagus hannah GN=PRDM7 PE=4 SV=1
40 : W8C906_CERCA 0.42 0.62 3 73 19 89 71 0 0 784 W8C906 Zinc finger BED domain-containing protein 1 (Fragment) OS=Ceratitis capitata GN=ZBED1 PE=2 SV=1
41 : F1R0K0_DANRE 0.39 0.53 5 59 20 78 59 2 4 481 F1R0K0 Uncharacterized protein (Fragment) OS=Danio rerio PE=4 SV=1
42 : H3B8Q5_LATCH 0.39 0.67 4 73 16 85 70 0 0 617 H3B8Q5 Uncharacterized protein (Fragment) OS=Latimeria chalumnae PE=4 SV=1
43 : I1ELK8_AMPQE 0.39 0.68 2 57 47 102 56 0 0 230 I1ELK8 Uncharacterized protein OS=Amphimedon queenslandica PE=4 SV=1
44 : I1FBE1_AMPQE 0.39 0.56 11 68 53 111 59 1 1 117 I1FBE1 Uncharacterized protein OS=Amphimedon queenslandica PE=4 SV=1
45 : I1FG18_AMPQE 0.38 0.64 2 56 45 100 56 1 1 139 I1FG18 Uncharacterized protein OS=Amphimedon queenslandica PE=4 SV=1
46 : I1EZK8_AMPQE 0.37 0.57 6 71 48 114 67 1 1 250 I1EZK8 Uncharacterized protein OS=Amphimedon queenslandica PE=4 SV=1
47 : W5KY15_ASTMX 0.37 0.52 3 72 30 96 71 3 5 644 W5KY15 Uncharacterized protein (Fragment) OS=Astyanax mexicanus GN=ZBED1 (4 of 5) PE=4 SV=1
48 : F6U264_XENTR 0.36 0.70 4 69 11 76 66 0 0 614 F6U264 Uncharacterized protein (Fragment) OS=Xenopus tropicalis GN=LOC100486384 PE=4 SV=1
49 : K9J7N8_XENTR 0.36 0.56 2 72 13 80 72 3 5 608 K9J7N8 Uncharacterized protein (Fragment) OS=Xenopus tropicalis PE=4 SV=1
50 : V9KXZ2_CALMI 0.36 0.59 3 62 27 87 61 1 1 330 V9KXZ2 Zinc finger BED domain-containing protein 1-like protein (Fragment) OS=Callorhynchus milii PE=2 SV=1
51 : I1EVH0_AMPQE 0.35 0.53 1 62 6 60 62 1 7 605 I1EVH0 Uncharacterized protein OS=Amphimedon queenslandica GN=LOC100639379 PE=4 SV=1
52 : I1F5Q2_AMPQE 0.35 0.57 10 72 15 76 63 1 1 576 I1F5Q2 Uncharacterized protein OS=Amphimedon queenslandica GN=LOC100633144 PE=4 SV=1
53 : I1FR46_AMPQE 0.35 0.57 6 72 24 91 68 1 1 374 I1FR46 Uncharacterized protein OS=Amphimedon queenslandica PE=4 SV=1
54 : I1G7W9_AMPQE 0.35 0.53 1 60 6 58 60 1 7 462 I1G7W9 Uncharacterized protein OS=Amphimedon queenslandica PE=4 SV=1
55 : I1GK92_AMPQE 0.35 0.61 4 72 17 84 69 1 1 317 I1GK92 Uncharacterized protein OS=Amphimedon queenslandica PE=4 SV=1
56 : I3KS27_ORENI 0.35 0.54 6 73 22 86 69 2 5 422 I3KS27 Uncharacterized protein OS=Oreochromis niloticus GN=LOC102077421 PE=4 SV=1
57 : T2MH53_HYDVU 0.35 0.53 7 73 22 89 68 1 1 637 T2MH53 Zinc finger BED domain-containing protein 1 (Fragment) OS=Hydra vulgaris GN=ZBED1 PE=2 SV=1
58 : G3Q1U2_GASAC 0.34 0.56 6 72 21 84 68 2 5 601 G3Q1U2 Uncharacterized protein (Fragment) OS=Gasterosteus aculeatus GN=ZBED1 (4 of 4) PE=4 SV=1
59 : H2LEC4_ORYLA 0.34 0.57 10 73 25 85 65 2 5 587 H2LEC4 Uncharacterized protein (Fragment) OS=Oryzias latipes PE=4 SV=1
60 : I1FPA6_AMPQE 0.34 0.55 6 71 48 114 67 1 1 250 I1FPA6 Uncharacterized protein OS=Amphimedon queenslandica PE=4 SV=1
61 : I3JRK8_ORENI 0.34 0.56 2 62 16 73 62 2 5 612 I3JRK8 Uncharacterized protein (Fragment) OS=Oreochromis niloticus PE=4 SV=1
62 : I1EML6_AMPQE 0.33 0.60 2 70 16 85 70 1 1 621 I1EML6 Uncharacterized protein OS=Amphimedon queenslandica PE=4 SV=1
63 : F1RBD5_DANRE 0.32 0.57 2 68 80 147 68 1 1 717 F1RBD5 Uncharacterized protein OS=Danio rerio GN=zgc:161969 PE=4 SV=1
## ALIGNMENTS 1 - 63
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A G 0 0 130 3 59 S S
2 2 A S + 0 0 110 38 60 AAAAAAAAAAAAAAAAAAAAAAAAAAAAA P P P T T PPP
3 3 A S S S+ 0 0 133 44 83 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHP PP P N K K KKS S KKP
4 4 A G S S- 0 0 76 49 52 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPP PPPA A GP P GGTSK KP RPK
5 5 A S - 0 0 72 50 66 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRS SSGS SKRK G RRGNR RG GGR
6 6 A S S S- 0 0 139 56 62 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAM MMAMAMNAA TTTAATS TSGG S TAGL
7 7 A G - 0 0 52 57 54 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKR RRTRQREQK KKTQVTR KRKTKG KTKK
8 8 A S + 0 0 67 59 8 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS SSSSSSSST SSSSSSS VSSSSS SSSS
9 9 A K > + 0 0 134 59 81 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKI IIVPQPDRK ADNRVES KSKVHV DVEA
10 10 A V T 3 S+ 0 0 10 61 40 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVY YYVYYYVYV IVIYVVVVVVVIVIIAVVV
11 11 A W T 3 S+ 0 0 78 64 0 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
12 12 A K S < S+ 0 0 168 64 38 KKKKKKKKKKKKKKKKKKKKKKKRRKKKRKKKKKKKKKTKKTEKQKKTKRTKKTKLKRRKRKE
13 13 A Y S S+ 0 0 37 64 16 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYFFFFFYYFYHFNYYYWFYYYYYYYHYWYYWFY
14 14 A F S S+ 0 0 0 64 5 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFLFFFFFFFFFFFFFFSFF
15 15 A G - 0 0 12 64 6 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGNGGGGGGGGG
16 16 A F - 0 0 70 64 19 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFCFLFYFFFKFLKFFFFFFFLY
17 17 A D + 0 0 101 64 85 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDpPPpppPQPsQAVKVLQKQVAKVKNAKRIERY
18 18 A T + 0 0 48 58 73 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTtAAttgSGSnGAQAP.G.P.KL.VSAV.P.KK
19 19 A N + 0 0 131 60 48 NNNNNNNNNNNNNNDNNNNNNNNNNDNDNDDDTTDDnNDNEDDDNDKDKG.DD.DTDS.D.DD
20 20 A A S S- 0 0 60 53 63 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA.DD..tNANKAEEEE.A.S..E.KDD..E.AP
21 21 A E S S+ 0 0 212 57 69 EEEEEEEEEEEEEEEEEEEEEEEEEDEEEDDEDDDDEAYAGYNNNS.Y.D.CN.KTK..N.EG
22 22 A G S S- 0 0 46 59 24 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGPNGNEGGGGG.G.G.DG.GEG.TGEGG
23 23 A C > - 0 0 47 60 101 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCDDDDDDKHKNRTQEQSRSR.GK.R.N.GQSMT
24 24 A I G > + 0 0 62 61 59 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIKIIIVIVPVPDIDP.TA.I.VEDSDAI
25 25 A L G 3 S+ 0 0 75 63 61 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLKLLLTILTLTQIVEDLSHL.IEVTTII
26 26 A Q G < S+ 0 0 133 63 70 QQQQQQQQQQQQQQQQQQQQQQQQQQEHQHHTTTTTKTDTDDDEEEADENDSDDS.DKLEDDA
27 27 A W S < S- 0 0 184 64 92 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWKKKKKRRKRKKKLDFQKQIDKSDQQNQQFQDD
28 28 A K S S+ 0 0 162 64 74 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKVVVVVTQSQETKDSDLTTEKEEKKKQNTDKGG
29 29 A K + 0 0 99 64 52 KKKKKKKKKKKKKKKKKKKKKKKKKRKKKRRKKKKKNKKKKKKTKSSKITNKNNETKNQSTTR
30 30 A I - 0 0 4 64 56 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIVIIITIVPAPPIIPAAPAVPPIVPVVP
31 31 A Y E -A 38 0A 55 64 83 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYVVVVVYIIIIIVKFKKIIVAVVAFIIILKQFV
32 32 A C E > -A 37 0A 0 64 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
33 33 A R T > 5S+ 0 0 107 64 61 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRIIIIIKTKTRKRKRKRKKKLKRLLKKRIKKKR
34 34 A I T 3 5S+ 0 0 78 64 48 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIVLLLLLLIVIHLLILIILCIILLILLQETILSM
35 35 A C T 3 5S- 0 0 49 64 8 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCECCSCCCCC
36 36 A M T < 5 + 0 0 137 64 91 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMKKKKKPGGGQGRLSLRGRFKSWKEYRHRLCNR
37 37 A A E < -A 32 0A 30 64 84 AAAAAAAAAAAAAAAAAAAAAAAAAATAANSTTTTTKTVTTVRQRQRVARSQVSCKQKTQKRK
38 38 A Q E +A 31 0A 159 64 73 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQVAQAVRSTATARKVKKSKKTSQPTPAK
39 39 A I - 0 0 25 64 25 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIILILIILIVVIVLVILVVLCIFVVVIVV
40 40 A A - 0 0 64 64 67 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAKTNTKSGKMVQSVPTASTRPHTAVAVS
41 41 A Y - 0 0 73 64 68 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYAAATYAAYHAYLASGTATAA
42 42 A S - 0 0 41 64 70 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSNNNNNSNSNkSSkrkkSakCGkCPpkrtktrr
43 43 A G S S+ 0 0 73 63 43 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGRRRRRGKGKgGGggggGgsKGsK.gggggsgg
44 44 A N S > S- 0 0 114 64 13 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNDNNNNNNNNNNNNGNNYNNSNNNNN
45 45 A T T 3> S+ 0 0 46 64 3 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTITTTTTTTTTTTTTTTTTTTTTTTT
46 46 A S H 3> S+ 0 0 82 64 28 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSTSSTTSSSTTSSSTSSTTSSSSPSS
47 47 A N H <> S+ 0 0 73 64 3 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNNNNNNNNNNNNNNNNNNNNNNN
48 48 A L H > S+ 0 0 0 64 2 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLMLLLMLLLLLLLLLLMLLLLLLLLLLM
49 49 A S H >X S+ 0 0 24 64 97 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSRRRRRCRRRRRTFMFFRLYLKYLFFIFHFFRQ
50 50 A Y H 3X S+ 0 0 122 64 93 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYMMMMMYTQTSQYTATHQHAKNSKYYKHHTYAH
51 51 A H H 3X S+ 0 0 14 64 4 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLHHHHHH
52 52 A L H << S+ 0 0 0 64 3 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLILVLLLLLLLLLLLLLLLLLL
53 53 A E H < S+ 0 0 96 64 78 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEQQQQQEIIIFIRRRRKIRKQKKQRQKKQRRKR
54 54 A K H < S+ 0 0 138 64 80 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKNNNNNLAFANYATNTKYHSTTNTNKDQYTKND
55 55 A N S < S+ 0 0 83 64 70 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNKKKKKNRNRHKHFNFYKKQKKQKNARRNFKNH
56 56 A H > + 0 0 42 64 3 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHPHHHHHHHHHHHHHHHHHHHH
57 57 A P H > S+ 0 0 85 63 57 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPAAAAARPRPPRTP PPRLPQLPQPEPKEPVKP
58 58 A E H > S+ 0 0 148 62 78 EDEEEEEEEDDDDDEDDDDDDDDDDEDDDIIHQQQQTQCQER K KVRLHKAEKEKDLDKSSM
59 59 A E H > S+ 0 0 52 62 39 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEQKEKKE E EEQKIEEEEDELQLEELE
60 60 A F H X S+ 0 0 33 61 19 FFFFFFFFFFFFFFFFFFFFFFYFFFFFFFFLLLLLFLYL Y Y YYYYYYFYYYYTYFYYYF
61 61 A C H < S+ 0 0 76 59 104 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCGSMLLRR HIH N N NTNQIQNL GSKEKNANA
62 62 A E H < S+ 0 0 109 59 36 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDD ERE E N NEDEEEME KREEENEQK
63 63 A F H < S+ 0 0 49 56 44 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFLLLLL IFI L M ISLC LV IIFCFI LL
64 64 A V < + 0 0 64 56 83 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVEEEEE HLH V N SVVM YK AQKVMS GN
65 65 A K + 0 0 137 56 66 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKSALSS HKH G K KNGK QP PKQKTE QR
66 66 A S - 0 0 104 55 68 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSSS S S N T TITL EK TILLST GK
67 67 A N + 0 0 154 55 63 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN Q Q G Q QRQR ET TRQHRQ SH
68 68 A S S S- 0 0 105 52 75 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTAT PP R R H S SSGS PK TAAAES SA
69 69 A G S S- 0 0 64 47 68 EEEEEEEEEEEEEEEEEEEEEEEEEEEDD P K K G TGAE TG SKETST G
70 70 A P - 0 0 139 46 77 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQ R K K V SA S TE KPEEKS K
71 71 A S - 0 0 109 17 64 E K S S A TA S ST TSDATT
72 72 A S 0 0 138 15 71 P Q T T A S S SP TCHSP
73 73 A G 0 0 115 8 43 G D D A GG A
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 33 0 0 67 0 0 0 0 0 0 0 0 0 3 0 0 0.637 21 0.41
2 2 A 0 0 0 0 0 0 0 0 76 16 3 5 0 0 0 0 0 0 0 0 38 0 0 0.748 24 0.39
3 3 A 0 0 0 0 0 0 0 0 0 11 7 0 0 66 0 14 0 0 2 0 44 0 0 1.063 35 0.16
4 4 A 0 0 0 0 0 0 0 8 4 76 2 2 0 0 2 6 0 0 0 0 49 0 0 0.956 31 0.48
5 5 A 0 0 0 0 0 0 0 12 0 0 12 0 0 0 70 4 0 0 2 0 50 0 0 0.966 32 0.33
6 6 A 0 2 0 9 0 0 0 5 64 0 7 11 0 0 0 0 0 0 2 0 56 0 0 1.228 40 0.37
7 7 A 2 0 0 0 0 0 0 4 0 0 0 9 0 0 12 67 5 2 0 0 57 0 0 1.156 38 0.46
8 8 A 2 0 0 0 0 0 0 0 0 0 97 2 0 0 0 0 0 0 0 0 59 0 0 0.172 5 0.91
9 9 A 8 0 5 0 0 0 0 0 3 3 3 0 0 2 3 59 2 3 2 5 59 0 0 1.603 53 0.19
10 10 A 77 0 8 0 0 0 13 0 2 0 0 0 0 0 0 0 0 0 0 0 61 0 0 0.740 24 0.59
11 11 A 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 64 0 0 0.000 0 1.00
12 12 A 0 2 0 0 0 0 0 0 0 0 0 8 0 0 11 75 2 3 0 0 64 0 0 0.895 29 0.61
13 13 A 0 0 0 0 14 5 77 0 0 0 0 0 0 3 0 0 0 0 2 0 64 0 0 0.797 26 0.84
14 14 A 0 2 0 0 97 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 64 0 0 0.161 5 0.94
15 15 A 0 0 0 0 0 0 0 97 0 0 0 0 0 0 0 0 0 0 3 0 64 0 0 0.139 4 0.94
16 16 A 0 5 0 0 88 0 3 0 0 0 0 0 2 0 0 3 0 0 0 0 64 0 0 0.542 18 0.81
17 17 A 6 2 2 0 0 0 2 0 5 13 2 0 0 0 3 8 6 2 2 50 64 6 5 1.794 59 0.14
18 18 A 3 2 0 0 0 0 0 7 9 5 5 60 0 0 0 5 2 0 2 0 58 0 0 1.486 49 0.27
19 19 A 0 0 0 0 0 0 0 2 0 0 2 5 0 0 0 3 0 2 52 35 60 7 1 1.176 39 0.52
20 20 A 0 0 0 0 0 0 0 0 68 2 2 2 0 0 0 4 0 11 4 8 53 0 0 1.176 39 0.36
21 21 A 0 0 0 0 0 0 5 4 4 0 2 2 2 0 0 4 0 56 9 14 57 0 0 1.534 51 0.30
22 22 A 0 0 0 0 0 0 0 86 0 2 0 2 0 0 0 0 0 5 3 2 59 1 0 0.599 20 0.75
23 23 A 0 0 0 2 0 0 0 3 0 0 5 3 53 2 7 5 5 2 3 10 60 0 0 1.740 58 -0.01
24 24 A 7 0 72 0 0 0 0 0 3 5 2 2 0 0 0 2 0 2 0 7 61 0 0 1.123 37 0.40
25 25 A 3 70 8 0 0 0 0 0 0 0 2 8 0 2 0 2 2 3 0 2 63 0 0 1.201 40 0.38
26 26 A 0 2 0 0 0 0 0 0 3 0 3 11 0 5 0 3 44 10 2 17 63 0 0 1.738 58 0.29
27 27 A 0 2 2 0 3 50 0 0 0 0 2 0 0 0 5 17 11 0 2 8 64 0 0 1.602 53 0.08
28 28 A 8 2 0 0 0 0 0 3 0 0 3 8 0 0 0 59 5 6 2 5 64 0 0 1.515 50 0.25
29 29 A 0 0 2 0 0 0 0 0 0 0 5 8 0 0 6 69 2 2 8 0 64 0 0 1.168 38 0.48
30 30 A 9 0 69 0 0 0 0 0 6 14 0 2 0 0 0 0 0 0 0 0 64 0 0 0.994 33 0.43
31 31 A 16 2 16 0 5 0 52 0 3 0 0 0 0 0 0 6 2 0 0 0 64 0 0 1.477 49 0.17
32 32 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 64 0 0 0.000 0 1.00
33 33 A 0 5 9 0 0 0 0 0 0 0 0 3 0 0 61 22 0 0 0 0 64 0 0 1.108 36 0.38
34 34 A 3 23 63 2 0 0 0 0 0 0 2 2 2 2 0 0 2 2 0 0 64 0 0 1.197 39 0.52
35 35 A 0 0 0 0 0 0 0 0 0 0 2 0 97 0 0 0 0 2 0 0 64 0 0 0.161 5 0.92
36 36 A 0 5 0 50 2 2 2 8 0 2 3 0 2 2 9 11 2 2 2 0 64 0 0 1.846 61 0.09
37 37 A 6 0 0 0 0 0 0 0 47 0 5 16 2 0 8 8 8 0 2 0 64 0 0 1.689 56 0.16
38 38 A 5 0 0 0 0 0 0 0 8 3 5 6 0 0 3 9 61 0 0 0 64 0 0 1.400 46 0.26
39 39 A 17 9 70 0 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 64 0 0 0.902 30 0.75
40 40 A 6 0 0 2 0 0 0 2 63 3 6 8 0 2 2 5 2 0 2 0 64 0 0 1.481 49 0.32
41 41 A 0 2 0 0 0 0 73 2 16 0 2 5 0 2 0 0 0 0 0 0 64 0 0 0.920 30 0.31
42 42 A 0 0 0 0 0 0 0 2 2 3 58 3 3 0 6 13 0 0 11 0 64 1 16 1.447 48 0.30
43 43 A 0 0 0 0 0 0 0 81 0 0 5 0 0 0 8 6 0 0 0 0 63 0 0 0.692 23 0.57
44 44 A 0 0 0 0 0 0 2 2 0 0 2 0 0 0 0 0 0 0 94 2 64 0 0 0.320 10 0.87
45 45 A 0 0 2 0 0 0 0 0 0 0 0 98 0 0 0 0 0 0 0 0 64 0 0 0.080 2 0.96
46 46 A 0 0 0 0 0 0 0 0 0 2 84 14 0 0 0 0 0 0 0 0 64 0 0 0.484 16 0.71
47 47 A 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 98 0 64 0 0 0.080 2 0.97
48 48 A 0 94 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 64 0 0 0.234 7 0.98
49 49 A 0 5 2 2 13 0 3 0 0 0 50 2 2 2 19 2 2 0 0 0 64 0 0 1.627 54 0.02
50 50 A 0 0 0 8 0 0 58 0 5 0 3 8 0 8 0 5 5 0 2 0 64 0 0 1.518 50 0.06
51 51 A 0 2 0 0 0 0 0 0 0 0 0 0 0 98 0 0 0 0 0 0 64 0 0 0.080 2 0.95
52 52 A 2 97 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 64 0 0 0.161 5 0.96
53 53 A 0 0 8 0 2 0 0 0 0 0 0 0 0 0 14 11 14 52 0 0 64 0 0 1.399 46 0.22
54 54 A 0 2 0 0 2 0 5 0 5 0 2 9 0 2 0 55 2 0 16 3 64 0 0 1.562 52 0.19
55 55 A 0 0 0 0 5 0 2 0 2 0 0 0 0 5 6 19 3 0 59 0 64 0 0 1.322 44 0.30
56 56 A 0 0 0 0 0 0 0 0 0 2 0 0 0 98 0 0 0 0 0 0 64 0 0 0.080 2 0.97
57 57 A 2 3 0 0 0 0 0 0 8 70 0 2 0 0 6 3 3 3 0 0 63 0 0 1.196 39 0.42
58 58 A 2 3 3 2 0 0 0 0 2 0 3 2 2 3 3 10 10 23 0 34 62 0 0 2.041 68 0.22
59 59 A 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 6 5 81 0 2 62 0 0 0.777 25 0.61
60 60 A 0 11 0 0 57 0 30 0 0 0 0 2 0 0 0 0 0 0 0 0 61 0 0 0.995 33 0.80
61 61 A 0 5 3 2 0 0 0 3 3 0 3 2 51 3 3 3 3 2 12 0 59 0 0 1.873 62 -0.05
62 62 A 0 0 0 2 0 0 0 0 0 0 0 0 0 0 3 3 2 80 5 5 59 0 0 0.852 28 0.64
63 63 A 2 18 11 2 63 0 0 0 0 0 2 0 4 0 0 0 0 0 0 0 56 0 0 1.175 39 0.56
64 64 A 64 2 0 4 0 0 2 2 2 0 4 0 0 4 0 4 2 9 4 0 56 0 0 1.454 48 0.16
65 65 A 0 2 0 0 0 0 0 4 2 4 5 2 0 4 2 68 5 2 2 0 56 0 0 1.365 45 0.33
66 66 A 0 5 4 0 0 0 0 2 0 0 71 11 0 0 0 4 0 2 2 0 55 0 0 1.104 36 0.32
67 67 A 0 0 0 0 0 0 0 2 0 0 2 4 0 4 7 0 13 2 67 0 55 0 0 1.179 39 0.36
68 68 A 0 0 0 0 0 0 0 2 10 6 13 60 0 2 4 2 0 2 0 0 52 0 0 1.397 46 0.25
69 69 A 0 0 0 0 0 0 0 11 2 2 4 9 0 0 0 6 0 62 0 4 47 0 0 1.354 45 0.31
70 70 A 2 0 0 0 0 0 0 0 2 4 7 2 0 0 2 11 63 7 0 0 46 0 0 1.357 45 0.22
71 71 A 0 0 0 0 0 0 0 0 18 0 35 29 0 0 0 6 0 6 0 6 17 0 0 1.534 51 0.36
72 72 A 0 0 0 0 0 0 0 0 7 20 33 20 7 7 0 0 7 0 0 0 15 0 0 1.732 57 0.28
73 73 A 0 0 0 0 0 0 0 50 25 0 0 0 0 0 0 0 0 0 0 25 8 0 0 1.040 34 0.57
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
32 16 62 1 pAt
35 16 30 1 pAt
36 16 63 1 pAt
37 15 35 3 pAVDg
37 17 40 1 nFt
41 14 33 3 sLKRn
41 39 61 1 kLg
44 33 85 1 kCg
45 42 86 1 rSg
46 38 85 1 kCg
47 37 66 1 kTg
49 38 50 1 aGg
50 41 67 1 kAs
53 38 61 1 kHs
56 34 55 1 pDg
57 37 58 1 kEg
58 34 54 1 rGg
59 30 54 1 tRg
60 38 85 1 kCg
61 38 53 1 tDs
62 42 57 1 rNg
63 42 121 1 rSg
//