Complet list of 2cq7 hssp file
Complete list of 2cq7.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 2CQ7
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-17
HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 19-MAY-05 2CQ7
COMPND MOL_ID: 1; MOLECULE: CYSTEINE-RICH SECRETORY PROTEIN-2; CHAIN: A; FRAG
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: HOMO SAPIENS; ORGANISM_COMMON: HUMAN;
AUTHOR T.ABE,H.HIROTA,F.HAYASHI,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMI
DBREF 2CQ7 A 8 43 UNP P16562 CRIS2_HUMAN 204 239
SEQLENGTH 49
NCHAIN 1 chain(s) in 2CQ7 data set
NALIGN 78
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : CRIS2_HUMAN 2CQ7 0.97 1.00 8 44 204 240 37 0 0 243 P16562 Cysteine-rich secretory protein 2 OS=Homo sapiens GN=CRISP2 PE=1 SV=1
2 : G3S7B6_GORGO 0.97 1.00 8 44 239 275 37 0 0 278 G3S7B6 Uncharacterized protein OS=Gorilla gorilla gorilla GN=101134472 PE=4 SV=1
3 : H2PJB1_PONAB 0.97 1.00 8 44 173 209 37 0 0 212 H2PJB1 Uncharacterized protein OS=Pongo abelii GN=CRISP2 PE=4 SV=1
4 : H2QT56_PANTR 0.97 1.00 8 44 238 274 37 0 0 277 H2QT56 Uncharacterized protein OS=Pan troglodytes GN=CRISP2 PE=4 SV=1
5 : F6SPH6_CALJA 0.95 1.00 8 44 222 258 37 0 0 261 F6SPH6 Uncharacterized protein OS=Callithrix jacchus GN=CRISP2 PE=4 SV=1
6 : F6T6F6_CALJA 0.95 1.00 8 44 204 240 37 0 0 243 F6T6F6 Uncharacterized protein OS=Callithrix jacchus GN=CRISP2 PE=4 SV=1
7 : F7HY73_CALJA 0.95 1.00 8 44 239 275 37 0 0 278 F7HY73 Uncharacterized protein OS=Callithrix jacchus GN=CRISP2 PE=4 SV=1
8 : F1PSF3_CANFA 0.89 1.00 8 44 205 241 37 0 0 244 F1PSF3 Uncharacterized protein OS=Canis familiaris GN=CRISP2 PE=4 SV=2
9 : B2ZGN2_PIG 0.86 0.97 8 44 205 241 37 0 0 244 B2ZGN2 Cysteine-rich secretory protein 2 OS=Sus scrofa PE=2 SV=1
10 : F1N2L7_BOVIN 0.86 1.00 8 44 205 241 37 0 0 244 F1N2L7 Uncharacterized protein OS=Bos taurus GN=CRISP2 PE=4 SV=1
11 : F1RPZ6_PIG 0.86 0.97 8 44 205 241 37 0 0 244 F1RPZ6 Uncharacterized protein OS=Sus scrofa GN=CRISP2 PE=4 SV=2
12 : G1LQC8_AILME 0.86 0.97 8 44 218 254 37 0 0 257 G1LQC8 Uncharacterized protein (Fragment) OS=Ailuropoda melanoleuca GN=CRISP2 PE=4 SV=1
13 : L8HZZ9_9CETA 0.86 1.00 8 44 217 253 37 0 0 256 L8HZZ9 Cysteine-rich secretory protein 2 (Fragment) OS=Bos mutus GN=M91_05411 PE=4 SV=1
14 : Q32LP8_BOVIN 0.86 1.00 8 44 205 241 37 0 0 244 Q32LP8 Cysteine-rich secretory protein 2 OS=Bos taurus GN=CRISP2 PE=2 SV=1
15 : Q8HX97_HORSE 0.86 0.97 8 44 205 241 37 0 0 244 Q8HX97 Cystein-rich secretory protein 2 OS=Equus caballus GN=CRISP2 PE=2 SV=1
16 : D6PX61_CAPHI 0.84 1.00 8 44 205 241 37 0 0 244 D6PX61 Cysteine-rich secretory protein 2 OS=Capra hircus GN=Crisp2 PE=2 SV=1
17 : D6PX63_SHEEP 0.84 1.00 8 44 205 241 37 0 0 244 D6PX63 Cysteine-rich secretory protein 2 OS=Ovis aries GN=Crisp2 PE=2 SV=1
18 : G1PFL7_MYOLU 0.84 0.95 8 44 218 254 37 0 0 257 G1PFL7 Uncharacterized protein (Fragment) OS=Myotis lucifugus GN=CRISP2 PE=4 SV=1
19 : L5JLJ7_PTEAL 0.84 0.95 8 44 165 201 37 0 0 204 L5JLJ7 Cysteine-rich secretory protein 2 OS=Pteropus alecto GN=PAL_GLEAN10025336 PE=4 SV=1
20 : M3YCS2_MUSPF 0.84 0.97 8 44 205 241 37 0 0 244 M3YCS2 Uncharacterized protein OS=Mustela putorius furo GN=CRISP2 PE=4 SV=1
21 : S7MLR1_MYOBR 0.84 0.95 8 44 94 130 37 0 0 133 S7MLR1 Cysteine-rich secretory protein 2 OS=Myotis brandtii GN=D623_10011894 PE=4 SV=1
22 : W5PS99_SHEEP 0.84 1.00 8 44 205 241 37 0 0 244 W5PS99 Uncharacterized protein OS=Ovis aries GN=CRISP2 PE=4 SV=1
23 : CRIS2_CAVPO 0.81 0.92 8 44 205 241 37 0 0 244 Q60477 Cysteine-rich secretory protein 2 OS=Cavia porcellus GN=CRISP2 PE=1 SV=1
24 : F7BWJ9_HORSE 0.78 0.95 8 44 206 242 37 0 0 245 F7BWJ9 Cysteine-rich secretory protein 3 OS=Equus caballus GN=CRISP3 PE=4 SV=1
25 : I3MKF8_SPETR 0.78 0.97 8 44 218 254 37 0 0 257 I3MKF8 Uncharacterized protein (Fragment) OS=Spermophilus tridecemlineatus GN=CRISP2 PE=4 SV=1
26 : CRIS3_HORSE 0.76 0.95 8 44 206 242 37 0 0 245 O19010 Cysteine-rich secretory protein 3 OS=Equus caballus GN=CRISP3 PE=1 SV=1
27 : CRIS2_MOUSE 2A05 0.73 0.89 8 44 204 240 37 0 0 243 P16563 Cysteine-rich secretory protein 2 OS=Mus musculus GN=Crisp2 PE=1 SV=1
28 : G3SW28_LOXAF 0.73 0.86 8 44 205 241 37 0 0 244 G3SW28 Uncharacterized protein OS=Loxodonta africana GN=CRISP2 PE=4 SV=1
29 : O88205_RAT 0.73 0.89 8 44 204 240 37 0 0 243 O88205 Cysteine-rich secretory protein 2 OS=Rattus norvegicus GN=Crisp2 PE=2 SV=1
30 : Q9R1L4_RAT 0.70 0.86 8 44 204 240 37 0 0 243 Q9R1L4 Cysteine-rich secretory protein-2 CRISP-2 OS=Rattus norvegicus GN=Crisp2 PE=2 SV=1
31 : L5JLE9_PTEAL 0.57 0.76 8 44 206 242 37 0 0 245 L5JLE9 Cysteine-rich secretory protein 3 OS=Pteropus alecto GN=PAL_GLEAN10025335 PE=4 SV=1
32 : B4E1S8_HUMAN 0.51 0.76 9 45 117 153 37 0 0 155 B4E1S8 cDNA FLJ59147, highly similar to Cysteine-rich secretory protein 3 OS=Homo sapiens PE=2 SV=1
33 : CRIS3_HUMAN 0.51 0.76 9 45 207 243 37 0 0 245 P54108 Cysteine-rich secretory protein 3 OS=Homo sapiens GN=CRISP3 PE=1 SV=1
34 : G1QVC7_NOMLE 0.51 0.76 9 45 207 243 37 0 0 245 G1QVC7 Uncharacterized protein OS=Nomascus leucogenys GN=CRISP3 PE=4 SV=1
35 : G1QVD4_NOMLE 0.51 0.76 9 45 229 265 37 0 0 267 G1QVD4 Uncharacterized protein OS=Nomascus leucogenys GN=CRISP3 PE=4 SV=1
36 : G3R5P9_GORGO 0.51 0.73 9 45 220 256 37 0 0 258 G3R5P9 Uncharacterized protein OS=Gorilla gorilla gorilla GN=101134818 PE=4 SV=1
37 : H2PJB2_PONAB 0.51 0.73 9 45 207 243 37 0 0 245 H2PJB2 Uncharacterized protein OS=Pongo abelii GN=CRISP3 PE=4 SV=1
38 : H2QT57_PANTR 0.51 0.76 9 45 207 243 37 0 0 245 H2QT57 Uncharacterized protein OS=Pan troglodytes GN=CRISP3 PE=4 SV=1
39 : J3KPA1_HUMAN 0.51 0.76 9 45 238 274 37 0 0 276 J3KPA1 Cysteine-rich secretory protein 3 OS=Homo sapiens GN=CRISP3 PE=2 SV=1
40 : J3KQX0_HUMAN 0.51 0.76 9 45 117 153 37 0 0 155 J3KQX0 Cysteine-rich secretory protein 3 OS=Homo sapiens GN=CRISP3 PE=2 SV=1
41 : K7FNH0_PELSI 0.51 0.76 8 44 201 237 37 0 0 240 K7FNH0 Uncharacterized protein OS=Pelodiscus sinensis PE=4 SV=1
42 : M0QRL4_DESRO 0.51 0.70 8 44 85 121 37 0 0 124 M0QRL4 CRiSP-Dr6 (Fragment) OS=Desmodus rotundus PE=2 SV=1
43 : M0QRL8_DESRO 0.51 0.70 8 44 86 122 37 0 0 125 M0QRL8 CRiSP-Dr1 (Fragment) OS=Desmodus rotundus PE=2 SV=1
44 : M0QRP2_DESRO 0.51 0.68 8 44 168 204 37 0 0 207 M0QRP2 CRiSP-Dr3 (Fragment) OS=Desmodus rotundus PE=2 SV=1
45 : M0QRV2_DESRO 0.51 0.68 8 44 195 231 37 0 0 234 M0QRV2 CRiSP-Dr7 OS=Desmodus rotundus PE=2 SV=1
46 : M0QRV6_DESRO 0.51 0.70 8 44 128 164 37 0 0 167 M0QRV6 CRiSP-Dr2 (Fragment) OS=Desmodus rotundus PE=2 SV=1
47 : M0QRY2_DESRO 0.51 0.68 8 44 172 208 37 0 0 211 M0QRY2 CRiSP-Dr5 (Fragment) OS=Desmodus rotundus PE=2 SV=1
48 : M0QSB4_DESRO 0.51 0.70 8 44 85 121 37 0 0 124 M0QSB4 CRiSP-Dr4 (Fragment) OS=Desmodus rotundus PE=2 SV=1
49 : M3YCQ4_MUSPF 0.51 0.78 8 44 222 258 37 0 0 261 M3YCQ4 Uncharacterized protein OS=Mustela putorius furo PE=4 SV=1
50 : U3BZ13_CALJA 0.50 0.79 8 45 219 256 38 0 0 258 U3BZ13 Cysteine-rich secretory protein 3 isoform 1 OS=Callithrix jacchus GN=CRISP3 PE=2 SV=1
51 : B2ZGN3_PIG 0.49 0.68 8 44 61 97 37 0 0 100 B2ZGN3 Cysteine-rich secretory protein 3 (Fragment) OS=Sus scrofa PE=2 SV=1
52 : D6PX62_CAPHI 0.49 0.76 8 44 205 241 37 0 0 244 D6PX62 Cysteine-rich secretory protein 3 OS=Capra hircus GN=Crisp3 PE=2 SV=1
53 : D6PX64_SHEEP 0.49 0.76 8 44 205 241 37 0 0 244 D6PX64 Cysteine-rich secretory protein 3 OS=Ovis aries GN=Crisp3 PE=2 SV=1
54 : E2E4F6_CELWA 0.49 0.76 8 44 204 239 37 1 1 242 E2E4F6 CRiSP-Cwar1 OS=Celestus warreni PE=2 SV=1
55 : F6R3I5_BOVIN 0.49 0.76 8 44 203 239 37 0 0 242 F6R3I5 Uncharacterized protein OS=Bos taurus GN=CRISP3 PE=4 SV=1
56 : I3JPX1_ORENI 0.49 0.65 8 44 197 233 37 0 0 239 I3JPX1 Uncharacterized protein OS=Oreochromis niloticus GN=LOC102079741 PE=4 SV=1
57 : I3LVL5_PIG 0.49 0.68 8 44 206 242 37 0 0 245 I3LVL5 Uncharacterized protein OS=Sus scrofa GN=CRISP3 PE=4 SV=1
58 : K7GKZ6_PIG 0.49 0.68 8 44 62 98 37 0 0 101 K7GKZ6 Uncharacterized protein (Fragment) OS=Sus scrofa GN=CRISP3 PE=4 SV=1
59 : Q3ZCL0_BOVIN 0.49 0.76 8 44 205 241 37 0 0 244 Q3ZCL0 Cysteine-rich secretory protein 2 OS=Bos taurus GN=CRISP3 PE=2 SV=1
60 : G1T438_RABIT 0.46 0.76 8 44 205 241 37 0 0 250 G1T438 Uncharacterized protein OS=Oryctolagus cuniculus GN=CRISP3 PE=4 SV=1
61 : G5BGH3_HETGA 0.46 0.59 8 44 215 251 37 0 0 254 G5BGH3 Pseudechetoxin-like protein OS=Heterocephalus glaber GN=GW7_03043 PE=4 SV=1
62 : K7FQF1_PELSI 0.46 0.81 8 44 203 239 37 0 0 242 K7FQF1 Uncharacterized protein OS=Pelodiscus sinensis PE=4 SV=1
63 : R4G7L7_9SAUR 0.46 0.73 8 44 199 235 37 0 0 238 R4G7L7 CRiSP-Ver-3 OS=Vermicella annulata PE=2 SV=1
64 : U6CNA2_NEOVI 0.46 0.78 8 44 205 241 37 0 0 244 U6CNA2 Cysteine-rich secretory protein 2 OS=Neovison vison GN=CRIS2 PE=2 SV=1
65 : B5G6G3_RHING 0.43 0.73 8 44 199 235 37 0 0 238 B5G6G3 Cysteine-rich secretory protein (Precursor) OS=Rhinoplocephalus nigrescens PE=2 SV=1
66 : C1JZW4_OPHHA 0.43 0.78 8 44 198 234 37 0 0 237 C1JZW4 Opharin OS=Ophiophagus hannah PE=2 SV=1
67 : CRVP1_HYDHA 0.43 0.73 8 44 199 235 37 0 0 238 Q8UW25 Cysteine-rich venom protein 1 OS=Hydrophis hardwickii PE=2 SV=2
68 : F7CZU9_HORSE 0.43 0.68 8 44 272 308 37 0 0 311 F7CZU9 Uncharacterized protein OS=Equus caballus GN=CRISP1 PE=4 SV=1
69 : F7FY55_MACMU 0.43 0.78 9 45 207 243 37 0 0 245 F7FY55 Uncharacterized protein OS=Macaca mulatta GN=CRISP3 PE=4 SV=1
70 : G1KE85_ANOCA 0.43 0.65 8 44 199 235 37 0 0 238 G1KE85 Uncharacterized protein OS=Anolis carolinensis GN=LOC100557540 PE=4 SV=1
71 : G1NX52_MYOLU 0.43 0.73 8 44 206 242 37 0 0 245 G1NX52 Uncharacterized protein OS=Myotis lucifugus PE=4 SV=1
72 : G7P4U1_MACFA 0.43 0.78 9 45 207 243 37 0 0 245 G7P4U1 Putative uncharacterized protein OS=Macaca fascicularis GN=EGM_13676 PE=4 SV=1
73 : K4P991_ORNAN 0.43 0.68 8 44 201 237 37 0 0 240 K4P991 Cysteine-rich secretory protein (Fragment) OS=Ornithorhynchus anatinus PE=2 SV=1
74 : K7FZ77_PELSI 0.43 0.59 8 44 205 241 37 0 0 244 K7FZ77 Uncharacterized protein (Fragment) OS=Pelodiscus sinensis PE=4 SV=1
75 : L5LRN9_MYODS 0.43 0.73 8 44 206 242 37 0 0 245 L5LRN9 Cysteine-rich secretory protein 3 OS=Myotis davidii GN=MDA_GLEAN10014975 PE=4 SV=1
76 : M3W8B6_FELCA 0.43 0.65 8 44 183 219 37 0 0 222 M3W8B6 Uncharacterized protein (Fragment) OS=Felis catus GN=LOC101081299 PE=4 SV=1
77 : O77719_HORSE 0.43 0.68 8 44 178 214 37 0 0 217 O77719 Cysteine-rich secretory protein-1 (Fragment) OS=Equus caballus GN=crisp-1 PE=2 SV=1
78 : Q8MHX2_HORSE 0.43 0.68 8 44 211 247 37 0 0 250 Q8MHX2 Cystein rich secretory protein 1 OS=Equus caballus GN=CRISP1 PE=2 SV=1
## ALIGNMENTS 1 - 70
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A G 0 0 135 1 0
2 2 A S + 0 0 121 1 0
3 3 A S S S+ 0 0 122 1 0
4 4 A G S S- 0 0 68 1 0
5 5 A S + 0 0 119 1 0
6 6 A S + 0 0 114 1 0
7 7 A G S S+ 0 0 74 1 0
8 8 A S - 0 0 81 68 48 SSSSSSSSTTTSTTSTTSSSSTSSSSSSSSS PSSSSSSSSASSSPSPSSSGPPPSPPPP P
9 9 A a - 0 0 57 79 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
10 10 A Q S S+ 0 0 175 79 64 QQQQQQQEQEQEEEEEEEEEEEEEEEDEDDEKKKKKKKKKNKRKKKKREKEEEKEPEEEEMTKEKKELKK
11 11 A Y - 0 0 111 79 11 YYYYYYYYYYYYYYYYYYYFYYYYFYFYFFYYYYYYYYYYYYYYYYYYYYYYYAYYYYYYHYYHYYYYYH
12 12 A Q - 0 0 137 79 49 QQQQQQQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEVEEEEEEEKEDEENEIDDEEAEKKNKEYED
13 13 A D - 0 0 59 79 7 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDNDDDDNDDDDDNDDDNDDDDDD
14 14 A L S S+ 0 0 138 79 71 LLLLMMMLLLLLLLLLLLLLLLLLLLLFLLVLLLLLLLLLVVVFFVVVELTTTDTHTTTITVDEDDTELK
15 15 A L S S- 0 0 47 79 56 LLLLLLLLLLLLLLLLLLLLLLLVLVLLLLYYYYYYYYYYFYYYYYYYYYIYYLYYIIYYIYLFFFFSYY
16 16 A S S S+ 0 0 118 79 16 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSISSSSSTSSSSSNSS
17 17 A N S > S+ 0 0 79 79 7 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNKNN
18 18 A b H > S+ 0 0 1 79 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
19 19 A D H > S+ 0 0 97 79 64 DDDDDDDDDDDDDDDDDGDDGDEDEDEAEEEKKKKKKKKKPKKKKKKKDAKAADAPKKADAPKNKQKKEG
20 20 A S H 4 S+ 0 0 84 79 60 SSSSSSSSSSSSSSSSSSSSSSSSSSSDSSQSSSSSSSSSADDDDDDDVSDSSSSIDDSDADSVASATNS
21 21 A L H >X>S+ 0 0 40 79 10 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLQLL
22 22 A K H 3<5S+ 0 0 60 79 27 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKMKKKKKMMKEVKAKAAAKKA
23 23 A N T 3<5S- 0 0 112 79 79 NNNNNNNKKKKKKKKKKTAKTKNKSKTISSNLLLLLLLLLSDDAADADKAKEEKENKKERKNRKKKKERR
24 24 A T T <45S+ 0 0 112 79 73 TTTTTTTTTTTTTTTTTTTTTTTITISKSSQTTTTTTTTTFQQQQQQQNTVTTQTTVVTMQSNNKQKATQ
25 25 A A T <5S- 0 0 45 79 84 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAALLLLLLLLLLFVVVVVVVYLVWWVWTVVWLHPSYSTTLYP
26 26 A G > < - 0 0 16 79 51 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGRGTTTTTTTTTGGGGGGGGSTNTTGTGNNTSGGRSKKKGSG
27 27 A c T 3 S+ 0 0 26 79 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
28 28 A E T 3 S+ 0 0 183 79 68 EEEEEEEEGEGGEEEQQGDGGQEEDEKEKKEKKKKKKKKKSTKKKTTKEQDAADASDDAEGEQEKQKSQS
29 29 A H S < S- 0 0 84 79 38 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSHSNHHSHIDTHTTTHYH
30 30 A E S S+ 0 0 150 79 64 EEEEEEEEEEEEEEEEEEEEEEQEEEEEEEAQQQQRRQQQPPPSSPPPDQDDDPDEDDDQKPEDEEELPG
31 31 A L S S+ 0 0 86 79 44 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLVVVVVVVFLLFFIFLLLFLIFWFWWWSFN
32 32 A L S S+ 0 0 0 79 47 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLTVVVVVVVVVVTTTTTTTVVLVVMVVLLVVTVIVIIIVVM
33 33 A K S S- 0 0 103 79 18 KKKKKKKKKKKKKKKKKKKKKKVKKKKKKKKRRRRRRRRRKKKKKKKKKRKKKKKKKKKKKKKKKKKKRM
34 34 A E S > S+ 0 0 107 79 65 EEEEEEEEEEEEEEEEEEEEEEEEEETEAANDDDDDDDDDKDDDDDDDKDTTTGTATTTNEESKSSSLDE
35 35 A K T 3 S+ 0 0 102 78 66 KKKKKKKKKKKKKKKKKKKKKKKNKNKKKKSSSSSSSSSSKKKKKKKKNGNNN.NWNNNNSNKNKKKFSD
36 36 A b T 3> S+ 0 0 0 79 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
37 37 A K H <> S+ 0 0 61 79 38 KKKKKKKKKKKKKKKKKKKKKKKKKKQQEEKKKKKKKKKKPKKKKKKKKKPKKKKPPPKKKLPKPPPKKA
38 38 A A H 4 S+ 0 0 6 79 1 AAAAAAAAAAAAAAAAAAAAAAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
39 39 A T H 4 S+ 0 0 13 79 51 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTSSSSSSSSSSSSSSSSSSSSTAASASTTASTSSSTSTTSS
40 40 A c H < S+ 0 0 35 79 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
41 41 A L S < S+ 0 0 104 79 88 LLLLLLLLLLLLLLRLLLQLLLRRQQLKLLNNNNNNNNNNLKKKKKKKENKNNQNTKKNYKRFEFFFLNL
42 42 A a + 0 0 24 79 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
43 43 A E S S- 0 0 121 79 69 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEESSSSSSSSSSTSSSSSSSETSQQTQTSSQKPNHEHHHDSK
44 44 A S S S- 0 0 117 79 55 NNNNNNNNGGGNGGNGGNNNNGDNNNDNDDNNNNNNNNNNTDDDDDDDDNDGGTGTDDGDSTTDNNNTNT
45 45 A G S S- 0 0 47 13 28 SSSSSSSSS S S
46 46 A P + 0 0 120 1 0
47 47 A S S S+ 0 0 108 1 0
48 48 A S 0 0 127 1 0
49 49 A G 0 0 103 1 0
## ALIGNMENTS 71 - 78
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....8....:....9....:....0....:....1....:....2....:....3....:....4
1 1 A G 0 0 135 1 0
2 2 A S + 0 0 121 1 0
3 3 A S S S+ 0 0 122 1 0
4 4 A G S S- 0 0 68 1 0
5 5 A S + 0 0 119 1 0
6 6 A S + 0 0 114 1 0
7 7 A G S S+ 0 0 74 1 0
8 8 A S - 0 0 81 68 48 A PPAGPP
9 9 A a - 0 0 57 79 0 CCCCCCCC
10 10 A Q S S+ 0 0 175 79 64 EKNTEKLL
11 11 A Y - 0 0 111 79 11 YYYYYYYY
12 12 A Q - 0 0 137 79 49 DEASDEYY
13 13 A D - 0 0 59 79 7 DDNDDDDD
14 14 A L S S+ 0 0 138 79 71 MLKIMKEE
15 15 A L S S- 0 0 47 79 56 YYWYYYSS
16 16 A S S S+ 0 0 118 79 16 SSSSSQNN
17 17 A N S > S+ 0 0 79 79 7 NNNNNNKK
18 18 A b H > S+ 0 0 1 79 0 CCCCCCCC
19 19 A D H > S+ 0 0 97 79 64 KEEPKNKK
20 20 A S H 4 S+ 0 0 84 79 60 DNEYDDTT
21 21 A L H >X>S+ 0 0 40 79 10 LLLLLLQQ
22 22 A K H 3<5S+ 0 0 60 79 27 KKKKKKKK
23 23 A N T 3<5S- 0 0 112 79 79 NRNISKEE
24 24 A T T <45S+ 0 0 112 79 73 QTSVQRAA
25 25 A A T <5S- 0 0 45 79 84 LYAFMLLL
26 26 A G > < - 0 0 16 79 51 SSTGGSGG
27 27 A c T 3 S+ 0 0 26 79 0 CCCCCCCC
28 28 A E T 3 S+ 0 0 183 79 68 GQNKGTSS
29 29 A H S < S- 0 0 84 79 38 NYHHNHHH
30 30 A E S S+ 0 0 150 79 64 DPPPDSLL
31 31 A L S S+ 0 0 86 79 44 FFQTFLSS
32 32 A L S S+ 0 0 0 79 47 VVVVVPVV
33 33 A K S S- 0 0 103 79 18 KRKKKKKK
34 34 A E S > S+ 0 0 107 79 65 TDSKTDLL
35 35 A K T 3 S+ 0 0 102 78 66 NSDSNSFF
36 36 A b T 3> S+ 0 0 0 79 0 CCCCCCCC
37 37 A K H <> S+ 0 0 61 79 38 KKEQKKKK
38 38 A A H 4 S+ 0 0 6 79 1 AAAAAAAA
39 39 A T H 4 S+ 0 0 13 79 51 ASSSASTT
40 40 A c H < S+ 0 0 35 79 0 CCCCCCCC
41 41 A L S < S+ 0 0 104 79 88 NNKHNYLL
42 42 A a + 0 0 24 79 0 CCCCCCCC
43 43 A E S S- 0 0 121 79 69 SSTTSKDD
44 44 A S S S- 0 0 117 79 55 KNTTKDTT
45 45 A G S S- 0 0 47 13 28 S
46 46 A P + 0 0 120 1 0
47 47 A S S S+ 0 0 108 1 0
48 48 A S 0 0 127 1 0
49 49 A G 0 0 103 1 0
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
2 2 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
3 3 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
4 4 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
5 5 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
6 6 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
7 7 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
8 8 A 0 0 0 0 0 0 0 3 4 22 59 12 0 0 0 0 0 0 0 0 68 0 0 1.139 38 0.51
9 9 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 79 0 0 0.000 0 1.00
10 10 A 0 4 0 1 0 0 0 0 0 1 0 3 0 0 3 29 13 41 3 4 79 0 0 1.625 54 0.35
11 11 A 0 0 0 0 6 0 89 0 1 0 0 0 0 4 0 0 0 0 0 0 79 0 0 0.461 15 0.88
12 12 A 1 0 1 0 0 0 4 0 3 0 1 0 0 0 0 5 10 65 3 8 79 0 0 1.338 44 0.51
13 13 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 94 79 0 0 0.236 7 0.92
14 14 A 10 49 3 6 4 0 0 0 0 0 0 11 0 1 0 4 0 6 0 5 79 0 0 1.725 57 0.28
15 15 A 3 39 5 0 6 1 42 0 0 0 4 0 0 0 0 0 0 0 0 0 79 0 0 1.330 44 0.44
16 16 A 0 0 1 0 0 0 0 0 0 0 92 1 0 0 0 0 1 0 4 0 79 0 0 0.363 12 0.84
17 17 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 96 0 79 0 0 0.161 5 0.93
18 18 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 79 0 0 0.000 0 1.00
19 19 A 0 0 0 0 0 0 0 4 9 5 0 0 0 0 0 34 1 11 3 33 79 0 0 1.619 54 0.36
20 20 A 3 0 1 0 0 0 1 0 5 0 61 4 0 0 0 0 1 1 3 20 79 0 0 1.309 43 0.40
21 21 A 0 96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 79 0 0 0.161 5 0.89
22 22 A 1 0 0 4 0 0 0 0 6 0 0 0 0 0 0 87 0 1 0 0 79 0 0 0.528 17 0.72
23 23 A 0 11 3 0 0 0 0 0 6 0 6 4 0 0 6 32 0 9 18 5 79 0 0 2.025 67 0.21
24 24 A 5 0 3 1 1 0 0 0 4 0 6 53 0 0 1 4 18 0 4 0 79 0 0 1.600 53 0.27
25 25 A 14 22 0 1 3 5 5 0 41 3 3 4 0 1 0 0 0 0 0 0 79 0 0 1.787 59 0.15
26 26 A 0 0 0 0 0 0 0 62 0 0 9 19 0 0 3 4 0 0 4 0 79 0 0 1.168 38 0.49
27 27 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 79 0 0 0.000 0 1.00
28 28 A 0 0 0 0 0 0 0 11 5 0 8 5 0 0 0 24 10 28 1 8 79 0 0 1.927 64 0.31
29 29 A 0 0 1 0 0 0 3 0 0 0 5 5 0 81 0 0 0 0 4 1 79 0 0 0.801 26 0.61
30 30 A 0 4 0 0 0 0 0 1 1 15 4 0 0 0 3 1 13 44 0 14 79 0 0 1.691 56 0.35
31 31 A 9 62 3 0 14 5 0 0 0 0 4 1 0 0 0 0 1 0 1 0 79 0 0 1.320 44 0.56
32 32 A 37 43 5 3 0 0 0 0 0 1 0 11 0 0 0 0 0 0 0 0 79 0 0 1.278 42 0.53
33 33 A 1 0 0 1 0 0 0 0 0 0 0 0 0 0 15 82 0 0 0 0 79 0 0 0.557 18 0.82
34 34 A 0 4 0 0 0 0 0 1 4 0 6 13 0 0 0 5 0 39 3 25 79 1 0 1.699 56 0.35
35 35 A 0 0 0 0 4 1 0 1 0 0 19 0 0 0 0 53 0 0 19 3 78 0 0 1.303 43 0.34
36 36 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 79 0 0 0.000 0 1.00
37 37 A 0 1 0 0 0 0 0 0 1 11 0 0 0 0 0 78 4 4 0 0 79 0 0 0.797 26 0.61
38 38 A 0 0 0 0 0 0 0 0 99 0 0 1 0 0 0 0 0 0 0 0 79 0 0 0.068 2 0.98
39 39 A 0 0 0 0 0 0 0 0 8 0 42 51 0 0 0 0 0 0 0 0 79 0 0 0.905 30 0.48
40 40 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 79 0 0 0.000 0 1.00
41 41 A 0 37 0 0 5 0 3 0 0 0 0 1 0 1 5 16 5 3 24 0 79 0 0 1.757 58 0.11
42 42 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 79 0 0 0.000 0 1.00
43 43 A 0 0 0 0 0 0 0 0 0 1 30 8 0 5 0 4 5 42 1 4 79 0 0 1.583 52 0.31
44 44 A 0 0 0 0 0 0 0 15 0 0 3 14 0 0 0 3 0 0 43 23 79 0 0 1.447 48 0.44
45 45 A 0 0 0 0 0 0 0 8 0 0 92 0 0 0 0 0 0 0 0 0 13 0 0 0.271 9 0.71
46 46 A 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
47 47 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
48 48 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
49 49 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
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