Complet list of 2c0x hssp file
Complete list of 2c0x.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 2C0X
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-17
HEADER VIRAL PROTEIN 08-SEP-05 2C0X
COMPND MOL_ID: 1; MOLECULE: COAT PROTEIN B; CHAIN: A; SYNONYM: FD GENE 8 COAT
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE FD; ORGANISM_TAXI
AUTHOR D.A.MARVIN,L.C.WELSH,M.F.SYMMONS,W.R.P.SCOTT,S.K.STRAUS
DBREF 2C0X A 1 50 UNP P69539 COATB_BPFD 24 73
SEQLENGTH 50
NCHAIN 1 chain(s) in 2C0X data set
NALIGN 67
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : CAPSD_BPF1 0.98 0.98 1 50 24 73 50 0 0 73 P69540 Capsid protein G8P OS=Enterobacteria phage f1 GN=VIII PE=1 SV=1
2 : CAPSD_BPFD 1MZT 0.98 0.98 1 50 24 73 50 0 0 73 P69539 Capsid protein G8P OS=Enterobacteria phage fd GN=VIII PE=1 SV=1
3 : D0U160_BPF1 0.98 0.98 1 50 24 73 50 0 0 73 D0U160 VIII OS=Enterobacteria phage f1 GN=VIII PE=4 SV=1
4 : Q38211_BPF1 0.98 0.98 1 42 24 65 42 0 0 65 Q38211 Bacteriophage F1 and amber mutant M13-8H1, gene VIII, 5' end. (Precursor) OS=Enterobacteria phage f1 PE=4 SV=1
5 : Q9T0Q9_BPFD 1NH4 0.98 0.98 1 50 1 50 50 0 0 50 Q9T0Q9 Gene-8 protein, G8P=MAJOR coat protein OS=Enterobacteria phage fd PE=1 SV=1
6 : A7BJW7_BPF1 0.96 0.96 1 50 24 73 50 0 0 73 A7BJW7 Protein VIII OS=Enterobacteria phage f1 GN=VIII PE=4 SV=1
7 : A7BJX7_BPF1 0.96 0.96 1 50 24 73 50 0 0 73 A7BJX7 Protein VIII OS=Enterobacteria phage f1 GN=VIII PE=4 SV=1
8 : CAPSD_BPM13 2CPB 0.96 0.98 1 50 24 73 50 0 0 73 P69541 Capsid protein G8P OS=Enterobacteria phage M13 GN=VIII PE=1 SV=1
9 : CAPSD_BPZJ2 0.96 0.98 1 50 1 50 50 0 0 50 P03618 Capsid protein G8P OS=Enterobacteria phage ZJ/2 GN=VIII PE=1 SV=1
10 : D0U170_BPF1 0.96 0.98 1 50 24 73 50 0 0 73 D0U170 VIII OS=Enterobacteria phage f1 GN=VIII PE=4 SV=1
11 : J7I0P6_BPM13 0.96 0.98 1 50 24 73 50 0 0 73 J7I0P6 Major coat protein OS=Enterobacteria phage M13 GN=VIII PE=4 SV=1
12 : CAPSD_BPIF1 1IFK 0.71 0.86 2 50 26 74 49 0 0 74 P03619 Capsid protein G8P OS=Enterobacteria phage If1 GN=VIII PE=1 SV=2
13 : R8UTJ9_9ENTR 0.71 0.86 2 50 26 74 49 0 0 74 R8UTJ9 Capsid protein G8P OS=Citrobacter sp. KTE32 GN=WEU_04652 PE=4 SV=1
14 : D2U3R5_9ENTR 0.54 0.76 9 49 17 57 41 0 0 58 D2U3R5 Putative uncharacterized protein OS=Arsenophonus nasoniae GN=ARN_33020 PE=4 SV=1
15 : Q1Z2M5_PHOPR 0.50 0.72 4 49 31 76 46 0 0 77 Q1Z2M5 Uncharacterized protein OS=Photobacterium profundum 3TCK GN=P3TCK_08566 PE=4 SV=1
16 : Q1Z9G9_PHOPR 0.50 0.72 4 49 31 76 46 0 0 77 Q1Z9G9 Uncharacterized protein OS=Photobacterium profundum 3TCK GN=P3TCK_19935 PE=4 SV=1
17 : Q9T0Q8_BPIKE 0.48 0.73 7 50 10 53 44 0 0 53 Q9T0Q8 Gene-8 protein, G8P=MAJOR coat protein OS=Enterobacteria phage IKe PE=1 SV=1
18 : B3HXZ5_ECOLX 0.47 0.73 1 49 31 79 49 0 0 80 B3HXZ5 Coat protein B OS=Escherichia coli F11 GN=EcF11_4854 PE=4 SV=1
19 : D8BBY2_ECOLX 0.47 0.73 1 49 31 79 49 0 0 80 D8BBY2 Phage major coat protein, Gp8 OS=Escherichia coli MS 200-1 GN=HMPREF9553_00470 PE=4 SV=1
20 : E1S287_ECOUM 0.47 0.73 1 49 31 79 49 0 0 80 E1S287 Uncharacterized protein OS=Escherichia coli (strain UM146) GN=UM146_09465 PE=4 SV=1
21 : E9TNQ4_ECOLX 0.47 0.73 1 49 31 79 49 0 0 80 E9TNQ4 Phage major coat protein, Gp8 OS=Escherichia coli MS 60-1 GN=HMPREF9533_00002 PE=4 SV=1
22 : F0KSK7_YERE3 0.47 0.73 1 49 31 79 49 0 0 80 F0KSK7 Coat protein B OS=Yersinia enterocolitica subsp. palearctica serotype O:9 / biotype 3 (strain 105.5R(r)) GN=YE105_C2156 PE=4 SV=1
23 : F4N6M3_YEREN 0.47 0.73 1 49 31 79 49 0 0 80 F4N6M3 Capsid protein G8P OS=Yersinia enterocolitica W22703 GN=VIII PE=4 SV=1
24 : G9UD57_SALMO 0.47 0.73 1 49 31 79 49 0 0 80 G9UD57 Uncharacterized protein OS=Salmonella enterica subsp. enterica serovar Montevideo str. SARB30 GN=SEEM030_18899 PE=4 SV=1
25 : I4T142_ECOLX 0.47 0.73 1 49 31 79 49 0 0 80 I4T142 Uncharacterized protein OS=Escherichia coli 541-15 GN=EC54115_07707 PE=4 SV=1
26 : L3DQ15_ECOLX 0.47 0.73 1 49 31 79 49 0 0 80 L3DQ15 Uncharacterized protein OS=Escherichia coli KTE206 GN=A15M_01727 PE=4 SV=1
27 : L4KXB1_ECOLX 0.47 0.73 1 49 31 79 49 0 0 80 L4KXB1 Uncharacterized protein OS=Escherichia coli KTE192 GN=A13U_01911 PE=4 SV=1
28 : L4QUF1_ECOLX 0.47 0.73 1 49 31 79 49 0 0 80 L4QUF1 Uncharacterized protein OS=Escherichia coli KTE215 GN=A175_04714 PE=4 SV=1
29 : L4UFI9_ECOLX 0.47 0.73 1 49 31 79 49 0 0 80 L4UFI9 Uncharacterized protein OS=Escherichia coli KTE109 GN=WIA_04448 PE=4 SV=1
30 : L4YAV4_ECOLX 0.47 0.73 1 49 31 79 49 0 0 80 L4YAV4 Uncharacterized protein OS=Escherichia coli KTE131 GN=WIU_04681 PE=4 SV=1
31 : L4ZX73_ECOLX 0.47 0.73 1 49 31 79 49 0 0 80 L4ZX73 Uncharacterized protein OS=Escherichia coli KTE145 GN=WK5_04654 PE=4 SV=1
32 : L6YUM1_SALEN 0.47 0.73 1 49 31 79 49 0 0 80 L6YUM1 Coat protein B OS=Salmonella enterica subsp. enterica serovar Enteritidis str. 81-2625 GN=SEEE2625_18953 PE=4 SV=1
33 : M8SUX6_ECOLX 0.47 0.73 1 49 31 79 49 0 0 80 M8SUX6 Capsid protein G8P OS=Escherichia coli 2872000 GN=EC2872000_1771 PE=4 SV=1
34 : M8T8W9_ECOLX 0.47 0.73 1 49 31 79 49 0 0 80 M8T8W9 Capsid protein G8P OS=Escherichia coli 2871950 GN=EC2871950_1646 PE=4 SV=1
35 : N1AP57_SALET 0.47 0.73 1 49 31 79 49 0 0 80 N1AP57 Coat protein B OS=Salmonella enterica subsp. enterica serovar Agona str. 15.H.03 GN=SA15_4636 PE=4 SV=1
36 : N2E758_ECOLX 0.47 0.73 1 49 31 79 49 0 0 80 N2E758 Capsid protein G8P OS=Escherichia coli 2846750 GN=EC2846750_1459 PE=4 SV=1
37 : S1V122_KLEPN 0.47 0.73 1 49 31 79 49 0 0 80 S1V122 Phage major coat protein, Gp8 OS=Klebsiella pneumoniae UHKPC81 GN=H232_0512 PE=4 SV=1
38 : T6DZG4_ECOLX 0.47 0.73 1 49 31 79 49 0 0 80 T6DZG4 Uncharacterized protein OS=Escherichia coli HVH 56 (4-2153033) GN=G728_01402 PE=4 SV=1
39 : T6NXN3_ECOLX 0.47 0.73 1 49 31 79 49 0 0 80 T6NXN3 Uncharacterized protein OS=Escherichia coli HVH 100 (4-2850729) GN=G761_04629 PE=4 SV=1
40 : T6SUQ3_ECOLX 0.47 0.73 1 49 31 79 49 0 0 80 T6SUQ3 Uncharacterized protein OS=Escherichia coli HVH 112 (4-5987253) GN=G773_04746 PE=4 SV=1
41 : T7P632_ECOLX 0.47 0.73 1 49 31 79 49 0 0 80 T7P632 Uncharacterized protein OS=Escherichia coli HVH 185 (4-2876639) GN=G837_01484 PE=4 SV=1
42 : T8EDV1_ECOLX 0.47 0.73 1 49 31 79 49 0 0 80 T8EDV1 Uncharacterized protein OS=Escherichia coli KOEGE 30 (63a) GN=G881_01479 PE=4 SV=1
43 : T8HSY1_ECOLX 0.47 0.73 1 49 31 79 49 0 0 80 T8HSY1 Uncharacterized protein OS=Escherichia coli KOEGE 70 (185a) GN=G892_01406 PE=4 SV=1
44 : T8QJF9_ECOLX 0.47 0.73 1 49 31 79 49 0 0 80 T8QJF9 Uncharacterized protein OS=Escherichia coli UMEA 3113-1 GN=G909_01488 PE=4 SV=1
45 : T9KX77_ECOLX 0.47 0.73 1 49 31 79 49 0 0 80 T9KX77 Uncharacterized protein OS=Escherichia coli UMEA 3490-1 GN=G976_04870 PE=4 SV=1
46 : T9LSI9_ECOLX 0.47 0.73 1 49 31 79 49 0 0 80 T9LSI9 Uncharacterized protein OS=Escherichia coli UMEA 3617-1 GN=G980_01531 PE=4 SV=1
47 : V0UUN9_ECOLX 0.47 0.73 1 49 31 79 49 0 0 80 V0UUN9 Phage major coat protein, Gp8 OS=Escherichia coli 907710 GN=HMPREF1598_00807 PE=4 SV=1
48 : V1D241_ECOLX 0.47 0.73 1 49 31 79 49 0 0 80 V1D241 Phage major coat protein, Gp8 OS=Escherichia coli A35218R GN=HMPREF1622_00923 PE=4 SV=1
49 : V2RIA3_ECOLX 0.47 0.73 1 49 31 79 49 0 0 80 V2RIA3 Uncharacterized protein OS=Escherichia coli UMEA 3290-1 GN=G959_04714 PE=4 SV=1
50 : V2S0W4_ECOLX 0.47 0.73 1 49 31 79 49 0 0 80 V2S0W4 Uncharacterized protein OS=Escherichia coli UMEA 3426-1 GN=G974_01712 PE=4 SV=1
51 : V7QD36_SALET 0.47 0.73 1 49 31 79 49 0 0 80 V7QD36 Capsid protein OS=Salmonella enterica subsp. enterica serovar Cerro str. CFSAN001691 GN=CFSAN001691_22650 PE=4 SV=1
52 : V7R433_SALET 0.47 0.73 1 49 31 79 49 0 0 80 V7R433 Capsid protein OS=Salmonella enterica subsp. enterica serovar Cerro str. CFSAN001690 GN=CFSAN001690_22615 PE=4 SV=1
53 : V7SBK1_SALET 0.47 0.73 1 49 31 79 49 0 0 80 V7SBK1 Capsid protein OS=Salmonella enterica subsp. enterica serovar Cerro str. CFSAN001692 GN=CFSAN001692_22620 PE=4 SV=1
54 : V7T744_SALET 0.47 0.73 1 49 31 79 49 0 0 80 V7T744 Capsid protein OS=Salmonella enterica subsp. enterica serovar Cerro str. CFSAN001697 GN=CFSAN001697_22635 PE=4 SV=1
55 : V7VU65_SALET 0.47 0.73 1 49 31 79 49 0 0 80 V7VU65 Capsid protein OS=Salmonella enterica subsp. enterica serovar Cerro str. CFSAN001587 GN=CFSAN001587_22880 PE=4 SV=1
56 : V7YKX0_SALET 0.47 0.73 1 49 31 79 49 0 0 80 V7YKX0 Capsid protein OS=Salmonella enterica subsp. enterica serovar Cerro str. 5569 GN=SEEC5569_17025 PE=4 SV=1
57 : F9S7V9_9VIBR 0.44 0.78 10 50 33 73 41 0 0 73 F9S7V9 Uncharacterized protein OS=Vibrio ichthyoenteri ATCC 700023 GN=VII00023_20732 PE=4 SV=1
58 : W9ADL5_PHOPO 0.44 0.58 1 50 31 80 50 0 0 81 W9ADL5 Capsid protein G8P OS=Photobacterium phosphoreum ANT220 GN=VIII PE=4 SV=1
59 : K8W5V2_9ENTR 0.43 0.79 7 48 36 77 42 0 0 78 K8W5V2 Uncharacterized protein OS=Providencia sneebia DSM 19967 GN=OO7_16330 PE=4 SV=1
60 : S5J8B0_VIBPH 0.43 0.68 7 50 44 87 44 0 0 87 S5J8B0 Uncharacterized protein OS=Vibrio parahaemolyticus O1:K33 str. CDC_K4557 GN=M636_03930 PE=4 SV=1
61 : T5E6L5_VIBPH 0.43 0.68 7 50 44 87 44 0 0 87 T5E6L5 Phage major coat , Gp8 family protein OS=Vibrio parahaemolyticus 10290 GN=D052_0351 PE=4 SV=1
62 : W3ZHU4_VIBPH 0.43 0.68 7 50 44 87 44 0 0 87 W3ZHU4 Phage major coat , Gp8 family protein OS=Vibrio parahaemolyticus 50 GN=D028_0382 PE=4 SV=1
63 : W6DMC1_VIBPH 0.43 0.68 7 50 44 87 44 0 0 87 W6DMC1 Uncharacterized protein OS=Vibrio parahaemolyticus UCM-V493 GN=VPUCM_20799 PE=4 SV=1
64 : CAPSD_BPIKE 1IFL 0.42 0.71 2 49 34 81 48 0 0 82 P03620 Capsid protein G8P OS=Enterobacteria phage IKe GN=VIII PE=1 SV=1
65 : D0M281_VIBSE 0.41 0.68 7 50 44 87 44 0 0 87 D0M281 Uncharacterized protein OS=Vibrio sp. (strain Ex25) GN=VEA_003457 PE=4 SV=1
66 : G0AGW2_COLFT 0.41 0.71 10 50 41 81 41 0 0 81 G0AGW2 Uncharacterized protein OS=Collimonas fungivorans (strain Ter331) GN=CFU_2137 PE=4 SV=1
67 : CAPSD_BPI22 0.39 0.71 1 49 35 83 49 0 0 84 P15416 Capsid protein G8P OS=Enterobacteria phage I2-2 GN=VIII PE=3 SV=1
## ALIGNMENTS 1 - 67
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A A 0 0 144 53 69 AAAAAAAAAAA TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT A S
2 2 A E + 0 0 173 56 61 EEEEEEEEEEEDD GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG D A T
3 3 A G S S+ 0 0 75 56 23 GGGGGGGGGGGAA GGGGGGGGGSGSGGGGGGGGGGGGGGGGGGGGGGGGGGG P A A
4 4 A D >> + 0 0 97 58 67 DDDDDDDDDDDTT GG TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT A T T
5 5 A D H 3> S+ 0 0 112 58 35 DDDDDDDDDDDSS TT DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD T N S
6 6 A P H 34 S+ 0 0 111 58 133 PPPPPPPPPPPQQ GG YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY G Y Y
7 7 A A H <> S+ 0 0 36 65 0 AAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAA A
8 8 A K H X S+ 0 0 123 65 83 KKKKKKKKKKKKK AATGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG DQATTATA T
9 9 A A H X S+ 0 0 56 66 64 AAAAAAAAAAAAAQAAEQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ ADQQQQES E
10 10 A A H > S+ 0 0 50 68 0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
11 11 A F H X S+ 0 0 148 68 52 FFFFFFFFFFFFFMFFMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMFFIFFFFMFFM
12 12 A D H X S+ 0 0 90 68 48 DDDDDDDNDDNDDDTTDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDTATTSSTDTTN
13 13 A S H X S+ 0 0 72 68 58 SSSSSSSSSSSSSSAASAAAAAAAAASASAAAAAAAAAAAAAAAAAAAAAAAAAAAAQSSTTSSEAS
14 14 A L H X S+ 0 0 109 68 12 LLLLLLLLLLLLLLVVLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLVVILLLLLLIL
15 15 A Q H X S+ 0 0 129 68 106 QQQQQQQQQQQTTLGGKLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLSAGGAAGKGGK
16 16 A A H X S+ 0 0 60 68 57 AAAAAAAAATAAATAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAETSSTTSDT
17 17 A S H X S+ 0 0 58 68 94 SSSSSSSSSSSQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQFLTYYYFQYNQ
18 18 A A H X S+ 0 0 40 68 33 AAAAAAAAAAAAAAVVAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAVAVVVVAVAA
19 19 A T H X S+ 0 0 107 68 70 TTTTTTNTTTTTTNTTINNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTITTT
20 20 A E H < S+ 0 0 135 68 31 EEEEEEEEEEEEETEEDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDKGDEEDDDAD
21 21 A M H >X S+ 0 0 110 68 47 YYYYYYYYYYYMMLYYLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLVFMMMMMLMML
22 22 A I H 3X S+ 0 0 90 68 38 IIIIIIIIIIISSIEEIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIEILLLLILFI
23 23 A G H 3X S+ 0 0 39 68 34 GGGGGGGGGGGGGGGGSGGGGGGGGGAGAGGGGGGGGGGGGGGGGGGGGGGGGGGGATDTTTTSTGD
24 24 A Y H <> S+ 0 0 159 68 113 YYYYYYYYYYYYYKYYQKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKAALSSSSQSLQ
25 25 A A H X S+ 0 0 58 68 76 AAAAAAAAAAAAAVTTTVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVAAATTTTTTAT
26 26 A W H X S+ 0 0 206 68 6 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWMW
27 27 A A H X S+ 0 0 50 68 49 AAAAAAAAAAAAAPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPGGGGPGPP
28 28 A M H X S+ 0 0 103 68 37 MMMMMMMMMMMLLVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVIIVIIIIVIVV
29 29 A V H X S+ 0 0 85 68 25 VVVVVVVVVVVVVVIIVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVIAAAAVAVV
30 30 A V H X S+ 0 0 99 68 26 VVVVVVVVVVVVVVLLTVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVTIAVVVVTVAT
31 31 A V H X S+ 0 0 112 68 77 VVVVVVVVVVVLLAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAALSLPPPPTPSS
32 32 A I H X S+ 0 0 99 68 26 IIIIIIIIIIIVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVLIVLMMLVLVV
33 33 A V H X>S+ 0 0 50 68 41 VVVVVVVVVVVVVVTTVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVTTVTTTTVTLA
34 34 A G H X5S+ 0 0 46 68 36 GGGGGGGGGGGGGGGGVGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGVVGVVVVVVGV
35 35 A A H X5S+ 0 0 53 68 22 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGGGGGAGMA
36 36 A T H X5S+ 0 0 74 68 94 TTTTTTTTTTTTTGFFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFVFFFFFGFFG
37 37 A I H X5S+ 0 0 94 68 39 IIIIITIIIIIVVLIILLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLIILIIIILIIL
38 38 A G H XX S+ 0 0 88 68 5 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIMIIIIIIIILI
40 40 A K H 3X S+ 0 0 110 68 39 KKKKKKKKKKKKKRKKKRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRKSKKKKKRKRR
41 41 A L H 3X S+ 0 0 77 68 34 LLLLLLLLLLLLLLLLLIIIIIIIIILILIIIIIIIIIIIIIIIIIIIIIIIIIIILLLLLLLLLLL
42 42 A F H < S+ 0 0 96 67 41 SSS SSSSSSSSSSNNSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSNKNNNNNSNNS
48 48 A K H 3< S+ 0 0 151 67 5 KKK KKKKKKKRRKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
49 49 A A T 3< 0 0 91 66 0 AAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAA
50 50 A S < 0 0 169 22 57 SSS SSSSSSSSS S SA TTTT TA
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 0 25 0 2 74 0 0 0 0 0 0 0 0 53 0 0 0.645 21 0.30
2 2 A 0 0 0 0 0 0 0 70 2 0 0 2 0 0 0 0 0 21 0 5 56 0 0 0.883 29 0.38
3 3 A 0 0 0 0 0 0 0 88 7 2 4 0 0 0 0 0 0 0 0 0 56 0 0 0.496 16 0.77
4 4 A 0 0 0 0 0 0 0 3 2 0 0 74 0 0 0 0 0 0 0 21 58 0 0 0.734 24 0.32
5 5 A 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 2 88 58 0 0 0.489 16 0.65
6 6 A 0 0 0 0 0 0 71 5 0 21 0 0 0 0 0 0 3 0 0 0 58 0 0 0.840 28 -0.34
7 7 A 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 65 0 0 0.000 0 1.00
8 8 A 0 0 0 0 0 0 0 60 8 0 0 8 0 0 0 22 2 0 0 2 65 0 0 1.160 38 0.17
9 9 A 0 0 0 0 0 0 0 0 26 0 2 0 0 0 0 0 67 5 0 2 66 0 0 0.887 29 0.35
10 10 A 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 68 0 0 0.000 0 1.00
11 11 A 0 0 1 63 35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 68 0 0 0.719 24 0.47
12 12 A 0 0 0 0 0 0 0 0 1 0 3 12 0 0 0 0 0 0 4 79 68 0 0 0.738 24 0.52
13 13 A 0 0 0 0 0 0 0 0 60 0 34 3 0 0 0 0 1 1 0 0 68 0 0 0.900 30 0.42
14 14 A 6 91 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 68 0 0 0.355 11 0.87
15 15 A 0 59 0 0 0 0 0 10 4 0 1 3 0 0 0 4 18 0 0 0 68 0 0 1.293 43 -0.07
16 16 A 0 0 0 0 0 0 0 0 24 0 4 69 0 0 0 0 0 1 0 1 68 0 0 0.858 28 0.42
17 17 A 0 1 0 0 3 0 6 0 0 0 18 1 0 0 0 0 69 0 1 0 68 0 0 1.018 33 0.06
18 18 A 12 0 0 0 0 0 0 0 88 0 0 0 0 0 0 0 0 0 0 0 68 0 0 0.362 12 0.67
19 19 A 0 0 3 0 0 0 0 0 0 0 0 37 0 0 0 0 0 0 60 0 68 0 0 0.777 25 0.29
20 20 A 0 0 0 0 0 0 0 1 1 0 0 1 0 0 0 1 0 26 0 68 68 0 0 0.864 28 0.68
21 21 A 1 63 0 15 1 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 68 0 0 1.012 33 0.53
22 22 A 0 7 84 0 1 0 0 0 0 0 3 0 0 0 0 0 0 4 0 0 68 0 0 0.643 21 0.62
23 23 A 0 0 0 0 0 0 0 81 4 0 3 9 0 0 0 0 0 0 0 3 68 0 0 0.731 24 0.66
24 24 A 0 3 0 0 0 0 24 0 3 0 7 0 0 0 0 59 4 0 0 0 68 0 0 1.190 39 -0.13
25 25 A 59 0 0 0 0 0 0 0 26 0 0 15 0 0 0 0 0 0 0 0 68 0 0 0.946 31 0.23
26 26 A 0 0 0 1 0 99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 68 0 0 0.077 2 0.94
27 27 A 0 0 0 0 0 0 0 7 21 72 0 0 0 0 0 0 0 0 0 0 68 0 0 0.753 25 0.50
28 28 A 69 3 10 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 68 0 0 0.899 30 0.63
29 29 A 88 0 4 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 68 0 0 0.440 14 0.74
30 30 A 87 3 1 0 0 0 0 0 3 0 0 6 0 0 0 0 0 0 0 0 68 0 0 0.559 18 0.74
31 31 A 18 6 0 0 0 0 0 0 62 7 4 3 0 0 0 0 0 0 0 0 68 0 0 1.204 40 0.23
32 32 A 72 6 19 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 68 0 0 0.823 27 0.73
33 33 A 84 1 0 0 0 0 0 0 1 0 0 13 0 0 0 0 0 0 0 0 68 0 0 0.540 18 0.59
34 34 A 15 0 0 0 0 0 0 85 0 0 0 0 0 0 0 0 0 0 0 0 68 0 0 0.418 13 0.63
35 35 A 0 0 0 1 0 0 0 10 88 0 0 0 0 0 0 0 0 0 0 0 68 0 0 0.407 13 0.77
36 36 A 1 0 0 0 15 0 0 63 0 0 0 21 0 0 0 0 0 0 0 0 68 0 0 0.959 32 0.06
37 37 A 3 65 31 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 68 0 0 0.810 27 0.61
38 38 A 4 0 0 0 0 0 0 34 62 0 0 0 0 0 0 0 0 0 0 0 68 0 0 0.802 26 0.52
39 39 A 0 1 97 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 68 0 0 0.153 5 0.95
40 40 A 0 0 0 0 0 0 0 0 0 0 1 0 0 0 63 35 0 0 0 0 68 0 0 0.719 24 0.61
41 41 A 0 46 54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 68 0 0 0.689 23 0.66
42 42 A 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 68 0 0 0.000 0 1.00
43 43 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 67 0 0 0.000 0 1.00
44 44 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 67 0 0 0.000 0 1.00
45 45 A 1 0 0 0 90 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 67 0 0 0.418 13 0.53
46 46 A 7 0 0 0 0 0 0 1 13 0 63 15 0 0 0 0 0 0 0 0 67 0 0 1.103 36 0.30
47 47 A 0 0 0 0 0 0 0 0 0 0 84 0 0 0 0 1 0 0 15 0 67 0 0 0.497 16 0.59
48 48 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 96 0 0 0 0 67 0 0 0.183 6 0.94
49 49 A 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 66 0 0 0.000 0 1.00
50 50 A 0 0 0 0 0 0 0 0 9 0 68 23 0 0 0 0 0 0 0 0 22 0 0 0.816 27 0.43
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
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