Complet list of 2bn5 hssp file
Complete list of 2bn5.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 2BN5
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-17
HEADER NUCLEAR PROTEIN 21-MAR-05 2BN5
COMPND MOL_ID: 1; MOLECULE: PSI; CHAIN: A; FRAGMENT: B BOX, RESIDUES 651-683;
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; ORGANISM_COMM
AUTHOR T.IGNJATOVIC,J.-C.YANG,P.J.G.BUTLER,D.NEUHAUS,K.NAGAI
DBREF 2BN5 A 651 683 UNP Q7JPS0 Q7JPS0_DROSP 651 683
DBREF 2BN5 B 405 425 UNP P17133 RU17_DROME 405 425
SEQLENGTH 33
NCHAIN 1 chain(s) in 2BN5 data set
NALIGN 86
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : A1ZAK7_DROME 1.00 1.00 1 33 651 683 33 0 0 796 A1ZAK7 LD35640p OS=Drosophila melanogaster GN=Psi PE=2 SV=1
2 : A1ZAK9_DROME 1.00 1.00 1 33 571 603 33 0 0 716 A1ZAK9 P-element somatic inhibitor, isoform A OS=Drosophila melanogaster GN=Psi PE=4 SV=1
3 : B3MDA1_DROAN 1.00 1.00 1 32 677 708 32 0 0 832 B3MDA1 GF13443 OS=Drosophila ananassae GN=Dana\GF13443 PE=4 SV=1
4 : B4KNM3_DROMO 1.00 1.00 1 33 666 698 33 0 0 828 B4KNM3 GI18753 OS=Drosophila mojavensis GN=Dmoj\GI18753 PE=4 SV=1
5 : B4MR86_DROWI 1.00 1.00 1 32 693 724 32 0 0 838 B4MR86 GK21314 OS=Drosophila willistoni GN=Dwil\GK21314 PE=4 SV=1
6 : L0CPR4_DROME 1.00 1.00 1 33 571 603 33 0 0 716 L0CPR4 P-element somatic inhibitor OS=Drosophila melanogaster GN=Psi PE=4 SV=1
7 : L0CPZ4_DROME 1.00 1.00 1 33 571 603 33 0 0 716 L0CPZ4 P-element somatic inhibitor OS=Drosophila melanogaster GN=Psi PE=4 SV=1
8 : L0CPZ9_DROME 1.00 1.00 1 33 571 603 33 0 0 716 L0CPZ9 P-element somatic inhibitor OS=Drosophila melanogaster GN=Psi PE=4 SV=1
9 : L0CR28_DROME 1.00 1.00 1 33 571 603 33 0 0 716 L0CR28 P-element somatic inhibitor OS=Drosophila melanogaster GN=Psi PE=4 SV=1
10 : L0CR32_DROME 1.00 1.00 1 33 571 603 33 0 0 716 L0CR32 P-element somatic inhibitor OS=Drosophila melanogaster GN=Psi PE=4 SV=1
11 : L0CRH5_DROME 1.00 1.00 1 33 571 603 33 0 0 716 L0CRH5 P-element somatic inhibitor OS=Drosophila melanogaster GN=Psi PE=4 SV=1
12 : L0CRT0_DROME 1.00 1.00 1 33 571 603 33 0 0 716 L0CRT0 P-element somatic inhibitor OS=Drosophila melanogaster GN=Psi PE=4 SV=1
13 : L0CRT5_DROME 1.00 1.00 1 33 571 603 33 0 0 716 L0CRT5 P-element somatic inhibitor OS=Drosophila melanogaster GN=Psi PE=4 SV=1
14 : Q7JPS0_DROSP2BN6 1.00 1.00 1 33 651 683 33 0 0 796 Q7JPS0 PSI OS=Drosophila sp. GN=Psi PE=1 SV=1
15 : A1ZAK8_DROME 0.97 1.00 1 33 651 683 33 0 0 797 A1ZAK8 P-element somatic inhibitor, isoform C OS=Drosophila melanogaster GN=Psi PE=4 SV=1
16 : B4HTA3_DROSE 0.97 1.00 1 33 655 687 33 0 0 802 B4HTA3 GM20025 OS=Drosophila sechellia GN=Dsec\GM20025 PE=4 SV=1
17 : B4LM88_DROVI 0.97 0.97 1 33 672 704 33 0 0 831 B4LM88 GJ21777 OS=Drosophila virilis GN=Dvir\GJ21777 PE=4 SV=1
18 : B4P5U7_DROYA 0.97 1.00 1 33 652 684 33 0 0 802 B4P5U7 GE14030 OS=Drosophila yakuba GN=Dyak\GE14030 PE=4 SV=1
19 : B4QIG8_DROSI 0.97 1.00 1 33 655 687 33 0 0 803 B4QIG8 GD25511 OS=Drosophila simulans GN=Dsim\GD25511 PE=4 SV=1
20 : O96828_DROME 0.97 1.00 1 33 660 692 33 0 0 806 O96828 EG:EG0003.2 protein (Fbgn0014870;psi protein) OS=Drosophila melanogaster GN=Psi PE=4 SV=1
21 : Q960R6_DROME 0.97 1.00 1 33 515 547 33 0 0 661 Q960R6 LD38872p OS=Drosophila melanogaster GN=Psi PE=2 SV=1
22 : B3NP59_DROER 0.94 1.00 1 33 653 685 33 0 0 801 B3NP59 GG22239 OS=Drosophila erecta GN=Dere\GG22239 PE=4 SV=1
23 : B4GIM5_DROPE 0.91 0.97 1 33 690 722 33 0 0 834 B4GIM5 GL16727 OS=Drosophila persimilis GN=Dper\GL16727 PE=4 SV=1
24 : B4J6M2_DROGR 0.91 0.97 1 33 680 712 33 0 0 842 B4J6M2 GH21156 OS=Drosophila grimshawi GN=Dgri\GH21156 PE=4 SV=1
25 : B5DUR6_DROPS 0.91 0.97 1 33 692 724 33 0 0 836 B5DUR6 GA27688 OS=Drosophila pseudoobscura pseudoobscura GN=Dpse\GA27688 PE=4 SV=1
26 : T1DI19_ANOAQ 0.88 0.96 2 26 388 412 25 0 0 412 T1DI19 Putative psi (Fragment) OS=Anopheles aquasalis PE=2 SV=1
27 : T1PJK3_MUSDO 0.83 0.93 3 32 550 579 30 0 0 687 T1PJK3 KH domain protein OS=Musca domestica PE=2 SV=1
28 : H9KM86_APIME 0.82 0.89 2 29 619 646 28 0 0 735 H9KM86 Uncharacterized protein OS=Apis mellifera GN=LOC552294 PE=4 SV=1
29 : W8C526_CERCA 0.82 0.91 1 33 16 48 33 0 0 170 W8C526 Uncharacterized protein (Fragment) OS=Ceratitis capitata PE=2 SV=1
30 : E2A2F8_CAMFO 0.79 0.86 2 29 574 601 28 0 0 690 E2A2F8 Far upstream element-binding protein 1 OS=Camponotus floridanus GN=EAG_16078 PE=4 SV=1
31 : E2B9Y0_HARSA 0.79 0.86 2 29 635 662 28 0 0 751 E2B9Y0 Far upstream element-binding protein 1 OS=Harpegnathos saltator GN=EAI_09957 PE=4 SV=1
32 : E9IVU6_SOLIN 0.79 0.86 2 29 627 654 28 0 0 744 E9IVU6 Putative uncharacterized protein (Fragment) OS=Solenopsis invicta GN=SINV_11556 PE=4 SV=1
33 : F4WQ16_ACREC 0.79 0.86 2 29 615 642 28 0 0 731 F4WQ16 Far upstream element-binding protein 1 OS=Acromyrmex echinatior GN=G5I_07953 PE=4 SV=1
34 : W4WYQ1_ATTCE 0.79 0.86 2 29 615 642 28 0 0 731 W4WYQ1 Uncharacterized protein OS=Atta cephalotes PE=4 SV=1
35 : V5GU43_ANOGL 0.77 0.87 2 31 465 494 30 0 0 573 V5GU43 Far upstream element-binding protein 3 (Fragment) OS=Anoplophora glabripennis GN=FUBP3 PE=4 SV=1
36 : W0I6C8_OSTFU 0.76 0.88 1 33 613 645 33 0 0 701 W0I6C8 Psi OS=Ostrinia furnacalis PE=2 SV=1
37 : W5JTI8_ANODA 0.74 0.90 2 32 600 630 31 0 0 630 W5JTI8 Far upstream (Fuse) binding protein (Fragment) OS=Anopheles darlingi GN=AND_002167 PE=4 SV=1
38 : N6TIU4_DENPD 0.73 0.90 2 31 530 559 30 0 0 634 N6TIU4 Uncharacterized protein (Fragment) OS=Dendroctonus ponderosae GN=YQE_05725 PE=4 SV=1
39 : S4PXY4_9NEOP 0.73 0.88 1 33 400 432 33 0 0 498 S4PXY4 P-element somatic inhibitor OS=Pararge aegeria PE=4 SV=1
40 : U4UCP0_DENPD 0.73 0.90 2 31 88 117 30 0 0 192 U4UCP0 Uncharacterized protein (Fragment) OS=Dendroctonus ponderosae GN=D910_05718 PE=4 SV=1
41 : W0IB02_HELAM 0.73 0.87 2 31 622 651 30 0 0 711 W0IB02 Psi OS=Helicoverpa armigera PE=2 SV=1
42 : D6WRB8_TRICA 0.72 0.88 2 33 645 676 32 0 0 756 D6WRB8 Putative uncharacterized protein OS=Tribolium castaneum GN=TcasGA2_TC009450 PE=4 SV=1
43 : K7IWB1_NASVI 0.72 0.88 2 33 614 645 32 0 0 745 K7IWB1 Uncharacterized protein OS=Nasonia vitripennis GN=LOC100119227 PE=4 SV=1
44 : T1HSJ2_RHOPR 0.72 0.91 2 33 112 143 32 0 0 243 T1HSJ2 Uncharacterized protein OS=Rhodnius prolixus PE=4 SV=1
45 : X1XUG9_ANODA 0.72 0.88 2 33 1202 1233 32 0 0 1325 X1XUG9 Uncharacterized protein OS=Anopheles darlingi PE=4 SV=1
46 : A8R081_BOMMO 0.71 0.84 3 33 620 650 31 0 0 703 A8R081 Bombyx homolog of P-element somatic inhibitor OS=Bombyx mori GN=BmPSI PE=2 SV=1
47 : E9FUI4_DAPPU 0.71 0.81 3 33 630 660 31 0 0 727 E9FUI4 Putative uncharacterized protein OS=Daphnia pulex GN=DAPPUDRAFT_311062 PE=4 SV=1
48 : H9J476_BOMMO 0.71 0.84 3 33 564 594 31 0 0 648 H9J476 Uncharacterized protein OS=Bombyx mori PE=4 SV=1
49 : Q7Q322_ANOGA 0.71 0.87 2 32 594 624 31 0 0 725 Q7Q322 AGAP011446-PA OS=Anopheles gambiae GN=AGAP011446 PE=4 SV=4
50 : U5EYN3_9DIPT 0.71 0.89 1 28 519 546 28 0 0 606 U5EYN3 Putative psi OS=Corethrella appendiculata PE=2 SV=1
51 : E0W0C9_PEDHC 0.69 0.81 2 33 602 633 32 0 0 708 E0W0C9 Far upstream fuse binding protein, putative OS=Pediculus humanus subsp. corporis GN=Phum_PHUM550050 PE=4 SV=1
52 : W8BJU0_CERCA 0.66 0.78 2 33 579 610 32 0 0 868 W8BJU0 Far upstream element-binding protein 2 OS=Ceratitis capitata GN=FUBP2 PE=2 SV=1
53 : F1KQI9_ASCSU 0.63 0.83 2 31 279 308 30 0 0 363 F1KQI9 Far upstream element-binding protein 1 OS=Ascaris suum PE=2 SV=1
54 : F1L4G2_ASCSU 0.63 0.83 2 31 484 513 30 0 0 515 F1L4G2 Far upstream element-binding protein 1 (Fragment) OS=Ascaris suum PE=2 SV=1
55 : F1LAJ9_ASCSU 0.63 0.83 2 31 300 329 30 0 0 384 F1LAJ9 Far upstream element-binding protein 1 (Fragment) OS=Ascaris suum PE=2 SV=1
56 : B0W743_CULQU 0.62 0.88 2 33 526 557 32 0 0 638 B0W743 Far upstream binding protein OS=Culex quinquefasciatus GN=CpipJ_CPIJ002909 PE=4 SV=1
57 : Q173N8_AEDAE 0.62 0.88 2 33 588 619 32 0 0 715 Q173N8 AAEL007042-PC OS=Aedes aegypti GN=AAEL007042 PE=4 SV=1
58 : Q173N9_AEDAE 0.62 0.88 2 33 579 610 32 0 0 706 Q173N9 AAEL007042-PA OS=Aedes aegypti GN=AAEL007042 PE=4 SV=1
59 : A8NLA0_BRUMA 0.59 0.78 2 33 492 523 32 0 0 579 A8NLA0 KH domain containing protein OS=Brugia malayi GN=Bm1_04840 PE=4 SV=1
60 : A8NPY5_BRUMA 0.59 0.78 2 33 530 561 32 0 0 614 A8NPY5 KH domain containing protein OS=Brugia malayi GN=Bm1_07305 PE=4 SV=1
61 : F1KR92_ASCSU 0.59 0.78 2 33 497 528 32 0 0 581 F1KR92 Far upstream element-binding protein 1 OS=Ascaris suum PE=2 SV=1
62 : F1L3D3_ASCSU 0.59 0.78 2 33 497 528 32 0 0 581 F1L3D3 Far upstream element-binding protein 1 (Fragment) OS=Ascaris suum PE=2 SV=1
63 : J0DR61_LOALO 0.59 0.78 2 33 492 523 32 0 0 582 J0DR61 KH domain-containing protein, variant OS=Loa loa GN=LOAG_16645 PE=4 SV=1
64 : J0XL59_LOALO 0.59 0.78 2 33 545 576 32 0 0 635 J0XL59 KH domain-containing protein OS=Loa loa GN=LOAG_16645 PE=4 SV=1
65 : J9BKW5_WUCBA 0.59 0.78 2 33 494 525 32 0 0 581 J9BKW5 KH domain-containing protein OS=Wuchereria bancrofti GN=WUBG_00982 PE=4 SV=1
66 : C4WWB0_ACYPI 0.56 0.78 1 32 56 87 32 0 0 182 C4WWB0 ACYPI006827 protein OS=Acyrthosiphon pisum GN=ACYPI006827 PE=2 SV=1
67 : J9K236_ACYPI 0.56 0.78 1 32 643 674 32 0 0 769 J9K236 Uncharacterized protein OS=Acyrthosiphon pisum PE=4 SV=2
68 : T1IUR8_STRMM 0.56 0.75 2 33 542 573 32 0 0 661 T1IUR8 Uncharacterized protein OS=Strigamia maritima PE=4 SV=1
69 : A8X8T3_CAEBR 0.55 0.81 3 33 482 512 31 0 0 568 A8X8T3 Protein CBG09562 OS=Caenorhabditis briggsae GN=CBG09562 PE=4 SV=2
70 : E3LTR1_CAERE 0.55 0.77 3 33 511 541 31 0 0 597 E3LTR1 Putative uncharacterized protein OS=Caenorhabditis remanei GN=CRE_30686 PE=4 SV=1
71 : G0N916_CAEBE 0.55 0.77 3 33 506 536 31 0 0 592 G0N916 Putative uncharacterized protein OS=Caenorhabditis brenneri GN=CAEBREN_19643 PE=4 SV=1
72 : H2WNL2_CAEJA 0.55 0.77 3 33 499 529 31 0 0 589 H2WNL2 Uncharacterized protein OS=Caenorhabditis japonica GN=WBGene00137410 PE=4 SV=1
73 : Q17935_CAEEL 0.55 0.77 3 33 503 533 31 0 0 589 Q17935 Protein C12D8.1, isoform a OS=Caenorhabditis elegans GN=C12D8.1 PE=4 SV=1
74 : Q17936_CAEEL 0.55 0.77 3 33 525 555 31 0 0 611 Q17936 Protein C12D8.1, isoform b OS=Caenorhabditis elegans GN=C12D8.1 PE=1 SV=1
75 : Q2XMZ9_CAEEL 0.55 0.77 3 33 462 492 31 0 0 548 Q2XMZ9 Protein C12D8.1, isoform c OS=Caenorhabditis elegans GN=C12D8.1 PE=4 SV=1
76 : U6P415_HAECO 0.55 0.77 2 32 521 551 31 0 0 613 U6P415 ISE/inbred ISE genomic scaffold, scaffold_pathogens_Hcontortus_scaffold_25 OS=Haemonchus contortus GN=HCOI_00418700 PE=4 SV=1
77 : H3DSL4_PRIPA 0.54 0.79 2 29 577 604 28 0 0 629 H3DSL4 Uncharacterized protein OS=Pristionchus pacificus GN=WBGene00089949 PE=4 SV=1
78 : W2SHI6_NECAM 0.53 0.75 2 33 464 495 32 0 0 557 W2SHI6 KH domain protein OS=Necator americanus GN=NECAME_05682 PE=4 SV=1
79 : L7M9N9_9ACAR 0.50 0.69 2 33 623 654 32 0 0 753 L7M9N9 Putative kh-type splicing regulatory protein OS=Rhipicephalus pulchellus PE=2 SV=1
80 : L7MDG1_9ACAR 0.50 0.69 2 33 558 589 32 0 0 680 L7MDG1 Putative kh-type splicing regulatory protein (Fragment) OS=Rhipicephalus pulchellus PE=2 SV=1
81 : V5HJL9_IXORI 0.50 0.69 2 33 610 641 32 0 0 733 V5HJL9 Putative far upstream element fuse binding protein 1 OS=Ixodes ricinus PE=2 SV=1
82 : E3N9B4_CAERE 0.48 0.79 1 33 527 559 33 0 0 580 E3N9B4 Putative uncharacterized protein OS=Caenorhabditis remanei GN=CRE_23697 PE=4 SV=1
83 : G0MEP0_CAEBE 0.48 0.73 1 33 487 519 33 0 0 538 G0MEP0 Putative uncharacterized protein OS=Caenorhabditis brenneri GN=CAEBREN_06932 PE=4 SV=1
84 : Q23487_CAEEL 0.48 0.79 1 33 504 536 33 0 0 557 Q23487 Protein ZK418.9, isoform a OS=Caenorhabditis elegans GN=CELE_ZK418.9 PE=4 SV=2
85 : Q7Z145_CAEEL 0.48 0.79 1 33 457 489 33 0 0 510 Q7Z145 Protein ZK418.9, isoform b OS=Caenorhabditis elegans GN=CELE_ZK418.9 PE=4 SV=1
86 : H2XJB0_CAEJA 0.47 0.75 1 32 55 86 32 0 0 104 H2XJB0 Uncharacterized protein (Fragment) OS=Caenorhabditis japonica GN=WBGene00184913 PE=4 SV=2
## ALIGNMENTS 1 - 70
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 651 A G 0 0 64 37 53 GGGGGGGGGGGGGGGGGGGGGGSSS G G A T TT
2 652 A A > + 0 0 43 76 42 AAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAPAAPPPPPAPA AAPAPPPAAAPPPPPPPPPP
3 653 A D T 3 + 0 0 100 87 0 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
4 654 A Y T 3> + 0 0 62 87 0 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
5 655 A S H <> S+ 0 0 0 87 0 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
6 656 A A H > S+ 0 0 55 87 22 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAVVVVVAAATATAAAAAVAVAAAAAAAAAAAAAAAAAAAAAA
7 657 A Q H 4 S+ 0 0 113 87 20 QQQQQQQQQQQQQQQQQQQQQQQQQEQQQQQQQQQQEQQQQQQQEQQQEEQQQQQEEEQQQQQQQQQAQQ
8 658 A W H X S+ 0 0 42 87 0 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
9 659 A A H X S+ 0 0 0 87 34 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAIAAAAAAAAAAAAAIIAMM
10 660 A E H < S+ 0 0 66 87 15 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEQEEAEEEEEEEEEEEEEEEEEEEEEEE
11 661 A Y H >> S+ 0 0 6 87 0 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
12 662 A Y H 3X>S+ 0 0 37 87 0 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
13 663 A R H 3<5S+ 0 0 70 87 10 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRKRRRRRRRRRRRRRRRRKK
14 664 A S H <45S+ 0 0 84 87 20 SSSSSSSSSSSSSSSSSSSSSSSSSRSSSSSSSSSSRSSSSSSSRSSSRRSSSSSRRRSSSSSSSSSSSS
15 665 A V H <5S- 0 0 53 87 35 VVVVVVVVVVVVVVVVVVVVVVVVVIIIIIIIIIIIVMIMIIILVIIIIIIMMMMLLLMMMMMMMIILII
16 666 A G T <5S+ 0 0 49 87 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
17 667 A K >< + 0 0 92 87 68 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKLMMMRRRMMMMMMMKKMAA
18 668 A I H > S+ 0 0 77 87 75 IIIIIIIIIIIIIIIIIIIIIIHVHIIIIIIIIIHLIVVVLHIIIVIVIVVMHHHVIIHHHHHHHNNFLH
19 669 A E H 4 S+ 0 0 173 87 49 EEEEEEEEEEEEEEEEEEEEEDEEEEEKAKKKKKKKEKKKKKKKEKGKEDKREEEEDDEEEEEEEKKRDD
20 670 A E H >> S+ 0 0 127 87 36 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEQQQEEEQQQQQQQEEEKK
21 671 A A H 3X S+ 0 0 0 87 0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
22 672 A E H 3X S+ 0 0 107 87 36 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAAEEEAAAAAAADDEEE
23 673 A A H X4 S+ 0 0 52 87 57 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAALAAAAAAAMLLLAAAVVLLVVVMMMAA
24 674 A I H >X S+ 0 0 6 87 9 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIVVIVV
25 675 A E H >X S+ 0 0 97 87 0 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
26 676 A K H X< S+ 0 0 164 87 74 KKKKKKKKKKKKKKKKKKKKKKKKKKKAKAVAAAAAKAGAAAAQKAAAKKAQNNNKKKNNNNNNNQQQAA
27 677 A T H X4 S+ 0 0 45 86 51 TTTTTTTTTTTTTTTTTTTTTTTTT QQNQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
28 678 A L H << S+ 0 0 35 86 34 LLLLLLLLLLLLLLLLLLLLLLLLL MMMMMMMMMMIMLMIMMMIIAIIIILLLLIIILLLLLLLVVAMM
29 679 A K T << S+ 0 0 158 85 29 KKKKKKKKKKKKKKKKKKKKKKKKK KKKKKKKKKKAKKKKKKKAKRKA KKKKKAAAKKKKKKKKKRKK
30 680 A N < + 0 0 57 78 82 NNNNNNNNNNNNNNNNTNNNNNNTN S Q NMSNLNLSSNSIMIA AAQQQHAAQQQQQQQAAVKK
31 681 A K + 0 0 139 78 48 KKKKKKKKKKKKKKKKKKKKKKKKK A G KKNKKKKKGKNKKKN KKNNNNNNNNNNNNNRRNKK
32 682 A Q 0 0 180 71 50 QQQQQQQQQQQQQQQQQQQQQQQQQ Q Q QK Q QKQKQQQK AQ KKKAAAAAAAQQQKK
33 683 A N 0 0 196 62 69 NN N NNNNNNNNNQQNQQQQQSNS N S Q QSQAQSQ AA ASSAAAAAAA AAA
## ALIGNMENTS 71 - 86
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....8....:....9....:....0....:....1....:....2....:....3....:....4
1 651 A G 0 0 64 37 53 AAAAA
2 652 A A > + 0 0 43 76 42 PPPPPPPPPPP
3 653 A D T 3 + 0 0 100 87 0 DDDDDDDDDDDDDDDD
4 654 A Y T 3> + 0 0 62 87 0 YYYYYYYYYYYYYYYY
5 655 A S H <> S+ 0 0 0 87 0 SSSSSSSSSSSSSSSS
6 656 A A H > S+ 0 0 55 87 22 AAAAAAAAQQQAAAAA
7 657 A Q H 4 S+ 0 0 113 87 20 QQQQQQQQAAAQQQQQ
8 658 A W H X S+ 0 0 42 87 0 WWWWWWWWWWWWWWWW
9 659 A A H X S+ 0 0 0 87 34 MMMMMAAAIIIAAAAA
10 660 A E H < S+ 0 0 66 87 15 EEEEEEEEEEEAAAAA
11 661 A Y H >> S+ 0 0 6 87 0 YYYYYYYYYYYYYYYY
12 662 A Y H 3X>S+ 0 0 37 87 0 YYYYYYYYYYYYYYYY
13 663 A R H 3<5S+ 0 0 70 87 10 KKKKKRRRRRRRRRRR
14 664 A S H <45S+ 0 0 84 87 20 SSSSSSNSSSSSSSSS
15 665 A V H <5S- 0 0 53 87 35 IIIIIMMMLLLIIIII
16 666 A G T <5S+ 0 0 49 87 0 GGGGGGGGGGGGGGGG
17 667 A K >< + 0 0 92 87 68 AAAAALMLMMMLLLLL
18 668 A I H > S+ 0 0 77 87 75 HHHHHHHHFFFVNVVA
19 669 A E H 4 S+ 0 0 173 87 49 DDDDDDDDRRREEEED
20 670 A E H >> S+ 0 0 127 87 36 KKKKKQQQEEEQQQQQ
21 671 A A H 3X S+ 0 0 0 87 0 AAAAAAAAAAAAAAAA
22 672 A E H 3X S+ 0 0 107 87 36 EEEEEAAAEEEAAAAA
23 673 A A H X4 S+ 0 0 52 87 57 AAAAALKLMMMMMMMM
24 674 A I H >X S+ 0 0 6 87 9 VVVVVIIIIIIVVVVV
25 675 A E H >X S+ 0 0 97 87 0 EEEEEEEEEEEEEEEE
26 676 A K H X< S+ 0 0 164 87 74 AAAAAAAAQQHNTSSS
27 677 A T H X4 S+ 0 0 45 86 51 QQQQQQQQQQQQQQQQ
28 678 A L H << S+ 0 0 35 86 34 MMMMMMMMAATMMMMM
29 679 A K T << S+ 0 0 158 85 29 KKKKKKRKRRRRRRRR
30 680 A N < + 0 0 57 78 82 KKKKKQ QGGGRRRRR
31 681 A K + 0 0 139 78 48 KKKKKN NNNNNNNNN
32 682 A Q 0 0 180 71 50 KKKKKA AQQQQQQQQ
33 683 A N 0 0 196 62 69 AAAAA ATTSAASS
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 651 A 0 0 0 0 0 0 0 68 16 0 8 8 0 0 0 0 0 0 0 0 37 0 0 0.967 32 0.46
2 652 A 0 0 0 0 0 0 0 0 58 42 0 0 0 0 0 0 0 0 0 0 76 0 0 0.681 22 0.58
3 653 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 87 0 0 0.000 0 1.00
4 654 A 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 87 0 0 0.000 0 1.00
5 655 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 87 0 0 0.000 0 1.00
6 656 A 8 0 0 0 0 0 0 0 86 0 0 2 0 0 0 0 3 0 0 0 87 0 0 0.534 17 0.78
7 657 A 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 86 9 0 0 87 0 0 0.489 16 0.79
8 658 A 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 87 0 0 0.000 0 1.00
9 659 A 0 0 7 8 0 0 0 0 85 0 0 0 0 0 0 0 0 0 0 0 87 0 0 0.525 17 0.65
10 660 A 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 1 92 0 0 87 0 0 0.313 10 0.85
11 661 A 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 87 0 0 0.000 0 1.00
12 662 A 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 87 0 0 0.000 0 1.00
13 663 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 91 9 0 0 0 0 87 0 0 0.307 10 0.90
14 664 A 0 0 0 0 0 0 0 0 0 0 90 0 0 0 9 0 0 0 1 0 87 0 0 0.369 12 0.80
15 665 A 32 9 40 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 87 0 0 1.262 42 0.65
16 666 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 87 0 0 0.000 0 1.00
17 667 A 0 9 0 17 0 0 0 0 8 0 0 0 0 0 3 62 0 0 0 0 87 0 0 1.137 37 0.31
18 668 A 14 3 46 1 5 0 0 0 1 0 0 0 0 26 0 0 0 0 3 0 87 0 0 1.459 48 0.25
19 669 A 0 0 0 0 0 0 0 1 1 0 0 0 0 0 6 23 0 52 0 17 87 0 0 1.249 41 0.50
20 670 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 21 71 0 0 87 0 0 0.770 25 0.64
21 671 A 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 87 0 0 0.000 0 1.00
22 672 A 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 77 0 2 87 0 0 0.614 20 0.63
23 673 A 6 9 0 14 0 0 0 0 70 0 0 0 0 0 0 1 0 0 0 0 87 0 0 0.957 31 0.42
24 674 A 16 0 84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 87 0 0 0.441 14 0.90
25 675 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 87 0 0 0.000 0 1.00
26 676 A 1 0 0 0 0 0 0 1 30 0 3 1 0 1 0 41 8 0 13 0 87 0 0 1.512 50 0.26
27 677 A 0 0 0 0 0 0 0 0 0 0 0 30 0 0 0 0 69 0 1 0 86 0 0 0.672 22 0.48
28 678 A 2 44 13 35 0 0 0 0 5 0 0 1 0 0 0 0 0 0 0 0 86 0 0 1.273 42 0.66
29 679 A 0 0 0 0 0 0 0 0 7 0 0 0 0 0 13 80 0 0 0 0 85 0 0 0.630 21 0.70
30 680 A 1 3 3 3 0 0 0 4 9 0 6 3 0 1 6 9 17 0 36 0 78 0 0 2.064 68 0.17
31 681 A 0 0 0 0 0 0 0 3 1 0 0 0 0 0 3 59 0 0 35 0 78 0 0 0.922 30 0.51
32 682 A 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 20 66 0 0 0 71 0 0 0.869 29 0.50
33 683 A 0 0 0 0 0 0 0 0 35 0 16 3 0 0 0 0 19 0 26 0 62 0 0 1.440 48 0.30
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
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