Complet list of 2an7 hssp file
Complete list of 2an7.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 2AN7
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-16
HEADER DNA BINDING PROTEIN 11-AUG-05 2AN7
COMPND MOL_ID: 1; MOLECULE: PROTEIN PARD; CHAIN: A, B; ENGINEERED: YES
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; ORGANISM_TAXID: 562;
AUTHOR M.OBERER,K.ZANGGER,K.GRUBER,W.KELLER
DBREF 2AN7 A 1 83 UNP P22995 PARD4_ECOLI 1 83
DBREF 2AN7 B 101 183 UNP P22995 PARD4_ECOLI 1 83
SEQLENGTH 83
NCHAIN 2 chain(s) in 2AN7 data set
KCHAIN 1 chain(s) used here ; chains(s) : A
NALIGN 74
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : A6H962_9ZZZZ 1.00 1.00 1 83 1 83 83 0 0 83 A6H962 ParD antitoxin protein OS=Birmingham IncP-alpha plasmid GN=parD PE=4 SV=1
2 : J9S0M5_9BACT 1.00 1.00 1 83 12 94 83 0 0 94 J9S0M5 Partitioning protein OS=uncultured bacterium PE=4 SV=1
3 : PARD_ECOLX 2AN7 1.00 1.00 1 83 1 83 83 0 0 83 P22995 Antitoxin ParD OS=Escherichia coli GN=parD PE=1 SV=1
4 : Q0E6B4_PSEAI 1.00 1.00 1 83 1 83 83 0 0 83 Q0E6B4 RD antitoxin protein OS=Pseudomonas aeruginosa GN=parD PE=4 SV=1
5 : Q5ZHF1_9BACT 1.00 1.00 1 83 1 83 83 0 0 83 Q5ZHF1 ParD protein OS=uncultured bacterium GN=parD PE=4 SV=1
6 : E2CS47_9RHOB 0.93 0.99 1 83 1 83 83 0 0 83 E2CS47 Protein ParD OS=Roseibium sp. TrichSKD4 GN=TRICHSKD4_5990 PE=4 SV=1
7 : W3V5C4_PHOTE 0.92 1.00 1 83 1 83 83 0 0 83 W3V5C4 Antitoxin ParD OS=Photorhabdus temperata subsp. khanii NC19 GN=PTE_03588 PE=4 SV=1
8 : V1T9W5_SALET 0.89 0.98 1 83 1 83 83 0 0 83 V1T9W5 Plasmid stabilization protein OS=Salmonella enterica subsp. enterica serovar Poona str. ATCC BAA-1673 GN=SEEP1673_02508 PE=4 SV=1
9 : B3XEA1_ECOLX 0.88 0.98 1 82 1 82 82 0 0 83 B3XEA1 Protein ParD OS=Escherichia coli 101-1 GN=EC1011_3537 PE=4 SV=1
10 : V5C9I6_9ENTR 0.88 0.96 1 83 1 83 83 0 0 83 V5C9I6 Antitoxin ParD OS=Serratia sp. DD3 GN=parD PE=4 SV=1
11 : J2T3D1_KLEPN 0.86 0.96 1 83 1 83 83 0 0 83 J2T3D1 Plasmid stabilization protein OS=Klebsiella pneumoniae subsp. pneumoniae KPNIH18 GN=KPNIH18_26866 PE=4 SV=1
12 : K8FUZ4_9XANT 0.86 0.96 1 83 1 83 83 0 0 83 K8FUZ4 Plasmid stabilization protein OS=Xanthomonas axonopodis pv. malvacearum str. GSPB1386 GN=MOU_20615 PE=4 SV=1
13 : L7HDD5_XANCT 0.83 0.96 1 82 1 82 82 0 0 84 L7HDD5 Plasmid stabilization protein OS=Xanthomonas translucens DAR61454 GN=A989_02595 PE=4 SV=1
14 : Q9PBV4_XYLFA 0.83 0.91 1 81 1 81 81 0 0 83 Q9PBV4 Plasmid stabilization protein OS=Xylella fastidiosa (strain 9a5c) GN=XF_2031 PE=4 SV=1
15 : T0QEI4_PHOTE 0.83 0.96 1 83 1 83 83 0 0 83 T0QEI4 Plasmid stabilization protein OS=Photorhabdus temperata subsp. temperata M1021 GN=B738_27047 PE=4 SV=1
16 : U7QVL9_PHOTE 0.83 0.96 1 83 1 83 83 0 0 83 U7QVL9 Antitoxin OS=Photorhabdus temperata J3 GN=O185_20915 PE=4 SV=1
17 : V8L7X5_XYLFS 0.83 0.91 1 81 1 81 81 0 0 83 V8L7X5 Antitoxin OS=Xylella fastidiosa 32 GN=B398_04895 PE=4 SV=1
18 : B0RMH5_XANCB 0.82 0.95 1 82 1 82 82 0 0 84 B0RMH5 Plasmid stabilization protein OS=Xanthomonas campestris pv. campestris (strain B100) GN=parD PE=4 SV=1
19 : B3Q493_RHIE6 0.82 0.96 1 83 1 83 83 0 0 83 B3Q493 Probable plasmid stabilization protein OS=Rhizobium etli (strain CIAT 652) GN=RHECIAT_PC0000824 PE=4 SV=1
20 : F2A3H1_RHIET 0.82 0.96 1 83 1 83 83 0 0 83 F2A3H1 Putative plasmid stabilization protein OS=Rhizobium etli CNPAF512 GN=RHECNPAF_1330017 PE=4 SV=1
21 : K8YYK7_XANCT 0.82 0.95 1 82 1 82 82 0 0 84 K8YYK7 Plasmid stabilization protein OS=Xanthomonas translucens pv. graminis ART-Xtg29 GN=parD PE=4 SV=1
22 : L0SXR4_XANCT 0.82 0.96 1 82 1 82 82 0 0 84 L0SXR4 Plasmid stabilization protein OS=Xanthomonas translucens pv. translucens DSM 18974 GN=parD PE=4 SV=1
23 : U7QYH0_PHOTE 0.82 0.95 1 83 1 83 83 0 0 83 U7QYH0 Antitoxin OS=Photorhabdus temperata J3 GN=O185_19335 PE=4 SV=1
24 : A0P0T2_9RHOB 0.81 0.96 1 83 1 81 83 1 2 81 A0P0T2 Plasmid stabilization protein OS=Labrenzia aggregata IAM 12614 GN=SIAM614_01359 PE=4 SV=1
25 : F4SYJ4_ECOLX 0.81 0.95 1 83 9 91 83 0 0 91 F4SYJ4 Protein ParD OS=Escherichia coli M605 GN=ECIG_04838 PE=4 SV=1
26 : K0WHX0_9RHIZ 0.81 0.96 1 83 1 83 83 0 0 83 K0WHX0 Putative plasmid stabilization protein OS=Rhizobium sp. Pop5 GN=RCCGEPOP_02741 PE=4 SV=1
27 : A9BVK5_DELAS 0.80 0.93 1 82 1 82 82 0 0 83 A9BVK5 Plasmid stabilization protein OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=Daci_2434 PE=4 SV=1
28 : B2I500_XYLF2 0.80 0.95 1 79 1 79 79 0 0 79 B2I500 Uncharacterized protein OS=Xylella fastidiosa (strain M23) GN=XfasM23_1017 PE=4 SV=1
29 : E1RMG1_XYLFG 0.80 0.95 1 79 1 79 79 0 0 79 E1RMG1 Uncharacterized protein OS=Xylella fastidiosa (strain GB514) GN=XFLM_10420 PE=4 SV=1
30 : F7N9X0_XYLFS 0.80 0.95 1 79 48 126 79 0 0 126 F7N9X0 Uncharacterized protein (Fragment) OS=Xylella fastidiosa EB92.1 GN=XFEB_01190 PE=4 SV=1
31 : I3UHS5_ADVKW 0.80 0.98 1 83 1 83 83 0 0 83 I3UHS5 Plasmid stabilization protein OS=Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001) GN=TKWG_25090 PE=4 SV=1
32 : Q87CU8_XYLFT 0.80 0.95 1 79 1 79 79 0 0 79 Q87CU8 Plasmid stabilization protein OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=parD PE=4 SV=1
33 : T0QPB7_PHOTE 0.80 0.95 1 83 1 83 83 0 0 86 T0QPB7 Plasmid stabilization protein OS=Photorhabdus temperata subsp. temperata M1021 GN=B738_06699 PE=4 SV=1
34 : W6RH38_PSEPS 0.80 0.96 1 83 1 83 83 0 0 83 W6RH38 Protein parD OS=Pseudomonas pseudoalcaligenes CECT 5344 GN=parD PE=4 SV=1
35 : W7L1G0_XYLFS 0.80 0.95 1 79 48 126 79 0 0 126 W7L1G0 Uncharacterized protein OS=Xylella fastidiosa Mul-MD GN=P910_003497 PE=4 SV=1
36 : W8FPF2_RHIRD 0.80 0.96 1 82 1 82 82 0 0 83 W8FPF2 Plasmid stabilization protein OS=Agrobacterium tumefaciens LBA4213 (Ach5) GN=X971_4818 PE=4 SV=1
37 : G7UVN5_PSEUP 0.78 0.88 1 81 1 81 81 0 0 84 G7UVN5 Plasmid stabilization protein OS=Pseudoxanthomonas spadix (strain BD-a59) GN=DSC_02495 PE=4 SV=1
38 : H0HIK2_RHIRD 0.78 0.96 1 83 1 83 83 0 0 83 H0HIK2 Putative plasmid stabilization protein OS=Agrobacterium tumefaciens 5A GN=AT5A_27568 PE=4 SV=1
39 : H1UKN6_ACEPA 0.78 0.89 1 83 12 94 83 0 0 94 H1UKN6 Plasmid stabilization protein OS=Acetobacter pasteurianus NBRC 101655 GN=APT_2707 PE=4 SV=1
40 : J0BNT7_RHILT 0.78 0.95 1 83 1 83 83 0 0 83 J0BNT7 Antitoxin ParD OS=Rhizobium leguminosarum bv. trifolii WSM2012 GN=Rleg10DRAFT_0140 PE=4 SV=1
41 : K2KUH3_9PROT 0.78 0.94 1 83 1 83 83 0 0 83 K2KUH3 Plasmid stabilization protein OS=Thalassospira profundimaris WP0211 GN=TH2_05643 PE=4 SV=1
42 : W0NDS0_RHILT 0.78 0.95 1 83 1 83 83 0 0 83 W0NDS0 Antitoxin OS=Rhizobium leguminosarum bv. trifolii CB782 GN=RLEG12_07510 PE=4 SV=1
43 : F0BJF0_9XANT 0.77 0.93 1 82 8 89 82 0 0 91 F0BJF0 Antitoxin ParD OS=Xanthomonas vesicatoria ATCC 35937 GN=XVE_4410 PE=4 SV=1
44 : E7PDQ8_PSESG 0.76 0.94 1 83 1 83 83 0 0 83 E7PDQ8 Plasmid stabilization protein OS=Pseudomonas syringae pv. glycinea str. B076 GN=PsgB076_28080 PE=4 SV=1
45 : F3CCS3_PSESG 0.76 0.94 1 83 1 83 83 0 0 83 F3CCS3 Plasmid stabilization protein OS=Pseudomonas syringae pv. glycinea str. race 4 GN=Pgy4_29070 PE=4 SV=1
46 : F3F693_9PSED 0.76 0.94 1 83 1 83 83 0 0 83 F3F693 Plasmid stabilization protein OS=Pseudomonas syringae pv. mori str. 301020 GN=PSYMO_31662 PE=4 SV=1
47 : K5C010_RHILU 0.75 0.95 1 83 1 83 83 0 0 83 K5C010 Putative plasmid stabilization protein OS=Rhizobium lupini HPC(L) GN=C241_15743 PE=4 SV=1
48 : V7Z6Y8_9XANT 0.75 0.89 1 82 1 83 83 1 1 85 V7Z6Y8 ParD OS=Xanthomonas hortorum pv. carotae str. M081 GN=parD PE=4 SV=1
49 : U4Q562_9RHIZ 0.73 0.94 1 83 1 83 83 0 0 83 U4Q562 Antitoxin ParD OS=Rhizobium sp. IRBG74 GN=parD PE=4 SV=1
50 : F1Z4M4_9SPHN 0.72 0.92 1 83 1 83 83 0 0 84 F1Z4M4 Plasmid stabilization protein OS=Novosphingobium nitrogenifigens DSM 19370 GN=Y88_2912 PE=4 SV=1
51 : Q1NH10_9SPHN 0.72 0.89 1 79 1 79 79 0 0 84 Q1NH10 Plasmid stabilization protein OS=Sphingomonas sp. SKA58 GN=SKA58_02290 PE=4 SV=1
52 : Q7N4K2_PHOLL 0.72 0.91 1 81 1 81 81 0 0 84 Q7N4K2 Complete genome; segment 8/17 OS=Photorhabdus luminescens subsp. laumondii (strain TT01) GN=plu2330 PE=4 SV=1
53 : F1Z8T4_9SPHN 0.70 0.92 1 83 1 83 83 0 0 84 F1Z8T4 Plasmid stabilization protein OS=Novosphingobium nitrogenifigens DSM 19370 GN=Y88_1385 PE=4 SV=1
54 : F6ICH6_9SPHN 0.70 0.89 1 82 1 82 82 0 0 84 F6ICH6 Plasmid stabilization protein OS=Novosphingobium sp. PP1Y GN=PP1Y_Lpl2017 PE=4 SV=1
55 : F4QH89_9CAUL 0.66 0.86 1 83 1 83 83 0 0 84 F4QH89 Plasmid stabilization protein OS=Asticcacaulis biprosthecum C19 GN=ABI_10630 PE=4 SV=1
56 : N1MV46_9SPHN 0.64 0.81 1 82 1 83 83 1 1 85 N1MV46 Plasmid stabilization protein OS=Sphingobium japonicum BiD32 GN=EBBID32_38590 PE=4 SV=1
57 : V4RBM0_9CAUL 0.63 0.79 1 82 1 82 82 0 0 84 V4RBM0 Antitoxin OS=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 GN=ABENE_15045 PE=4 SV=1
58 : K9VML4_9CYAN 0.52 0.81 1 80 1 81 81 1 1 85 K9VML4 Antitoxin ParD protein OS=Oscillatoria nigro-viridis PCC 7112 GN=Osc7112_4487 PE=4 SV=1
59 : F9ZDA5_9PROT 0.51 0.79 1 80 1 80 80 0 0 83 F9ZDA5 Antitoxin ParD protein OS=Nitrosomonas sp. AL212 GN=NAL212_3036 PE=4 SV=1
60 : H3ZDM5_9ALTE 0.49 0.72 3 77 2 75 75 1 1 80 H3ZDM5 Protein parD OS=Alishewanella jeotgali KCTC 22429 GN=AJE_07251 PE=4 SV=1
61 : J2IHY6_9ALTE 0.49 0.72 3 77 2 75 75 1 1 80 J2IHY6 Protein parD OS=Alishewanella aestuarii B11 GN=AEST_03830 PE=4 SV=1
62 : K6Y9R3_9ALTE 0.49 0.75 3 82 2 80 80 1 1 80 K6Y9R3 Protein parD OS=Glaciecola arctica BSs20135 GN=parD PE=4 SV=1
63 : W4MC16_9DELT 0.48 0.77 1 78 1 80 80 2 2 86 W4MC16 Uncharacterized protein OS=Candidatus Entotheonella sp. TSY2 GN=ETSY2_09475 PE=4 SV=1
64 : L0DTV2_THIND 0.47 0.80 1 83 1 82 83 1 1 83 L0DTV2 Plasmid stabilization protein OS=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) GN=parD [H] PE=4 SV=1
65 : W2UF76_9GAMM 0.47 0.69 3 76 2 74 74 1 1 78 W2UF76 Antitoxin ParD OS=Gammaproteobacteria bacterium MOLA455 GN=parD PE=4 SV=1
66 : U5QKI5_9CYAN 0.45 0.68 1 78 11 87 78 1 1 99 U5QKI5 Plasmid stabilization protein OS=Gloeobacter kilaueensis JS1 GN=GKIL_1888 PE=4 SV=1
67 : F3KYK4_9GAMM 0.43 0.67 3 77 2 75 75 1 1 78 F3KYK4 Uncharacterized protein OS=gamma proteobacterium IMCC3088 GN=IMCC3088_2024 PE=4 SV=1
68 : G4SVC6_META2 0.43 0.73 3 82 2 79 80 2 2 79 G4SVC6 Protein parD OS=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) GN=parD PE=4 SV=1
69 : H8Z656_9GAMM 0.43 0.75 1 78 1 78 79 2 2 86 H8Z656 Antitoxin ParD OS=Thiorhodovibrio sp. 970 GN=Thi970DRAFT_03210 PE=4 SV=1
70 : U3AHQ9_9RHOB 0.42 0.67 1 73 1 78 78 1 5 88 U3AHQ9 Uncharacterized protein OS=Loktanella cinnabarina LL-001 GN=MBE-LCI_3286 PE=4 SV=1
71 : W4LCT5_9DELT 0.40 0.65 1 81 1 86 86 2 5 90 W4LCT5 Antitoxin OS=Candidatus Entotheonella sp. TSY1 GN=ETSY1_28800 PE=4 SV=1
72 : G3IZ40_9GAMM 0.39 0.67 3 81 2 85 84 1 5 87 G3IZ40 Antitoxin ParD protein OS=Methylobacter tundripaludum SV96 GN=Mettu_3342 PE=4 SV=1
73 : V5BGZ9_9GAMM 0.39 0.67 3 81 2 85 84 2 5 87 V5BGZ9 Antitoxin ParD protein OS=Methyloglobulus morosus KoM1 GN=MGMO_53c00240 PE=4 SV=1
74 : W4M195_9DELT 0.35 0.65 1 65 1 70 71 3 7 71 W4M195 Antitoxin (Fragment) OS=Candidatus Entotheonella sp. TSY1 GN=ETSY1_00005 PE=4 SV=1
## ALIGNMENTS 1 - 70
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A M 0 0 176 67 1 MMMMMMMMMMMMMMMMMMMMMMMMVMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMM MM M MM
2 2 A S E +A 92 0A 15 67 16 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS AS S RP
3 3 A R E -A 91 0A 137 75 17 RRRRRRRRRRRRRRRRRRRRRRRRRRRCCCRCRRCRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRER
4 4 A L E -A 90 0A 12 75 3 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLILLLLLLLLLLLL
5 5 A T E -A 89 0A 43 75 41 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTSSSSNTSTSSIS
6 6 A I E -A 88 0A 0 75 0 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
7 7 A D E +A 87 0A 49 75 12 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDEEDDDEEEEDD
8 8 A M E -A 86 0A 5 75 28 MMMMMIIIIIIILMIIMLIILLIIIIMIIILIIMIIIIMIIILIIIILIIIIIIMIMVLVVIIIIVIVMI
9 9 A T > - 0 0 67 75 19 TTTTTTTTTTTTSTTTTSTTSSTTTTTTTTSTTTTTTTTTTTSTTTTNTTTTTSTTTTTTTTTTSTSTTT
10 10 A D H > S+ 0 0 99 75 50 DDDDDDDDDDDDDDDDDDDDDDDDDDPDDDDDDDDDSDDDDDDNNNGDDSEDSEDDDDPPPPDEPEPPDP
11 11 A Q H > S+ 0 0 152 75 27 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQEEAAEEQEQEEQE
12 12 A Q H >> S+ 0 0 50 75 4 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQEQQQQQQE
13 13 A H H 3X S+ 0 0 18 75 5 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHQHHHHHHHHHHHHHLHHHHHHHH
14 14 A Q H 3X S+ 0 0 127 75 9 QQQQQQQQQQQQQQQQQQQQQQQKQQQQQQQQQQQQQQQQKQQQQQQQQQQKQQQQQQQQQQQQQQQQQQ
15 15 A S H S+ 0 0 0 75 6 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
21 21 A A H <5S+ 0 0 59 75 1 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAPAAAAAAAAAAAAAAAAAAAAAA
22 22 A L H <5S+ 0 0 143 75 7 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLVLLLLMLLLLLRL
23 23 A Q H <5S- 0 0 101 75 31 QQQQQQQQQQQQQQQQQQQQQQQEQQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQLQQQQQAQQSHEK
24 24 A G T <5S+ 0 0 63 75 1 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGGGGGG
25 25 A K S > - 0 0 58 75 42 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTSSSTTTTTTTTTTTSSSSSSSSSSSTS
27 27 A I H 3>>S+ 0 0 1 75 4 IIIIIIIIIIIIIIIIIIIIIIIIIIIVVVIVIIVIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIVI
28 28 A K H 345S+ 0 0 74 75 16 KKKKKKKKKKKKKKKKKKKKKKKKKKEEEEKEKKEKKKKKKKKKKKKKKKKKKRKKRKKKKKKKKKKKKK
29 29 A Q H <>5S+ 0 0 102 75 32 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPQQQQQQQQEEDDNGQDEDDED
30 30 A Y H X5S+ 0 0 31 75 0 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYFYYYYYFYYYYFY
31 31 A A H X5S+ 0 0 0 75 50 AAAAAAAAAAAAAAAAAAAAAAAAAATAAAAAAAAATAAAAAAAAAVAVAATAAATAVVVVVVTVVVVAV
32 32 A L H >4< S+ 0 0 123 75 12 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAEEEEEEASEEK
34 34 A R H 3< S+ 0 0 87 75 12 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRQRRRKRKRKRKR
35 35 A L T << S+ 0 0 0 75 38 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLITTALLSLTVLT
36 36 A F S < S+ 0 0 57 75 9 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFLFFFFFFFFFFFFFFFLFLFLLLLLFLLLLLL
37 37 A P + 0 0 60 75 21 PPPPPPPPPPPPPTPPTPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPSPPDPPag
38 38 A G + 0 0 61 73 56 GGGGGGGGGGGGGGGGGGGGGGGSDGGSSSGSGGSGGGDGDGGGGGGDGAVDAAASASTNNKPPG..Akd
39 39 A D + 0 0 131 75 44 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDSDDDDDDDDDDDDMDNVQSNSGGGpGLEDEND
40 40 A A S S+ 0 0 82 72 72 AAAAAAAAATAAVAVVALTTVVVAATATTTTTVLTAATMATAVAAATDTAATAAGIWDS..NtSAPS.AM
41 41 A D S >> S+ 0 0 114 75 37 DDDDDDDDDDDDDDDDDNDDDDDDGDDDDDTDDDDDADDNNNNDDDDEDSGDSGDDERDDDEDEEDDDKS
42 42 A A H 3>>S+ 0 0 38 74 58 AAAAAAAAAAGGAAAAAAGGAAA.AGAAAAAAAAAAGATGAGAAAAAnAGDSGTDdGeEEEQdDENENPE
43 43 A D H 345S+ 0 0 117 68 37 DDDDDDDDDDEEDNNNNDDDDDN.DEGDDDEDNNDEDEDEDEDNNNGdEDDDDDAdAeDEE.q..TQ..D
44 44 A Q H <>5S+ 0 0 134 75 58 QQQQQQQQQQQQRQQQQQRRRRQQLRQQQQQQQQQRQRHRKRQQQQRQRQEQQQQTQQISSEQQAAAEEE
45 45 A A H >X5S+ 0 0 34 75 16 AAAAAAAAAAAATAAAAAAATTVAAAAAAATAAAAAAAAAAAAAAAAAAAPAAAAADAAAAAAAAKAAAA
46 46 A W H 3X5S+ 0 0 173 75 41 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWLLLLWALLLLSV
47 47 A Q H 34 S+ 0 0 43 60 44 GGGGGGGGGGEEEEEEEEEEEEEGGEE E EE EEEGQEQEEEEEEET KTEEREAE K S E
81 81 A D T 3 S+ 0 0 150 58 54 DDDDDNDEDDGGGDGGDGDDGGGHEGG D GG GDGKDTDRGGGGSGS NGDGNS A E A
82 82 A R T 3 0 0 125 51 42 RRRRRRRRRHRRR RR RRRRRRRRRR R WQ R RRRPRRSSSRRRQ QSPRS K S R
83 83 A A < 0 0 107 37 21 AAAAAAAA TAA AA AA ASAA T GA AAAAA AAAA AA A A S
## ALIGNMENTS 71 - 74
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....8....:....9....:....0....:....1....:....2....:....3....:....4
1 1 A M 0 0 176 67 1 M M
2 2 A S E +A 92 0A 15 67 16 S A
3 3 A R E -A 91 0A 137 75 17 RRRR
4 4 A L E -A 90 0A 12 75 3 LLLI
5 5 A T E -A 89 0A 43 75 41 SSSF
6 6 A I E -A 88 0A 0 75 0 IIII
7 7 A D E +A 87 0A 49 75 12 EEEE
8 8 A M E -A 86 0A 5 75 28 IVVV
9 9 A T > - 0 0 67 75 19 TTTT
10 10 A D H > S+ 0 0 99 75 50 PQPP
11 11 A Q H > S+ 0 0 152 75 27 EEEE
12 12 A Q H >> S+ 0 0 50 75 4 QQQQ
13 13 A H H 3X S+ 0 0 18 75 5 HHHH
14 14 A Q H 3X S+ 0 0 127 75 9 SQQQ
15 15 A S H S+ 0 0 0 75 6 ASSA
21 21 A A H <5S+ 0 0 59 75 1 AAAA
22 22 A L H <5S+ 0 0 143 75 7 LLLL
23 23 A Q H <5S- 0 0 101 75 31 RRRR
24 24 A G T <5S+ 0 0 63 75 1 GGGG
25 25 A K S > - 0 0 58 75 42 SSSS
27 27 A I H 3>>S+ 0 0 1 75 4 IIII
28 28 A K H 345S+ 0 0 74 75 16 KKKE
29 29 A Q H <>5S+ 0 0 102 75 32 DDDE
30 30 A Y H X5S+ 0 0 31 75 0 YYYY
31 31 A A H X5S+ 0 0 0 75 50 VVVV
32 32 A L H >4< S+ 0 0 123 75 12 EEEE
34 34 A R H 3< S+ 0 0 87 75 12 RRRQ
35 35 A L T << S+ 0 0 0 75 38 TVVT
36 36 A F S < S+ 0 0 57 75 9 LFFL
37 37 A P + 0 0 60 75 21 pqqp
38 38 A G + 0 0 61 73 56 dntn
39 39 A D + 0 0 131 75 44 eAnq
40 40 A A S S+ 0 0 82 72 72 lAkf
41 41 A D S >> S+ 0 0 114 75 37 TSDE
42 42 A A H 3>>S+ 0 0 38 74 58 EETE
43 43 A D H 345S+ 0 0 117 68 37 EED.
44 44 A Q H <>5S+ 0 0 134 75 58 EDED
45 45 A A H >X5S+ 0 0 34 75 16 AAAA
46 46 A W H 3X5S+ 0 0 173 75 41 LLLL
47 47 A Q H 34 S+ 0 0 43 60 44 EEE
81 81 A D T 3 S+ 0 0 150 58 54 QEE
82 82 A R T 3 0 0 125 51 42
83 83 A A < 0 0 107 37 21
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 1 0 0 99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 67 0 0 0.078 2 0.98
2 2 A 0 0 0 0 0 0 0 0 3 1 94 0 0 0 1 0 0 0 0 0 67 0 0 0.288 9 0.84
3 3 A 0 0 0 0 0 0 0 0 0 0 0 0 7 0 92 0 0 1 0 0 75 0 0 0.315 10 0.82
4 4 A 0 97 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 75 0 0 0.123 4 0.96
5 5 A 0 0 1 0 1 0 0 0 0 0 15 81 0 0 0 0 0 0 1 0 75 0 0 0.622 20 0.58
6 6 A 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 75 0 0 0.000 0 1.00
7 7 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 87 75 0 0 0.393 13 0.88
8 8 A 11 11 60 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 75 0 0 1.097 36 0.72
9 9 A 0 0 0 0 0 0 0 0 0 0 12 87 0 0 0 0 0 0 1 0 75 0 0 0.436 14 0.80
10 10 A 0 0 0 0 0 0 0 1 0 16 4 0 0 0 0 0 1 5 4 68 75 0 0 1.084 36 0.50
11 11 A 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 81 16 0 0 75 0 0 0.558 18 0.72
12 12 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 97 3 0 0 75 0 0 0.123 4 0.96
13 13 A 0 1 0 0 0 0 0 0 0 0 0 0 0 97 0 0 1 0 0 0 75 0 0 0.141 4 0.94
14 14 A 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 4 95 0 0 0 75 0 0 0.238 7 0.91
15 15 A 0 0 0 0 0 0 0 0 3 0 79 0 0 1 13 3 1 0 0 0 75 0 0 0.766 25 0.49
16 16 A 0 93 5 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 75 0 0 0.278 9 0.90
17 17 A 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 97 1 0 0 0 75 0 0 0.141 4 0.95
18 18 A 1 0 0 0 0 0 0 0 99 0 0 0 0 0 0 0 0 0 0 0 75 0 0 0.071 2 0.98
19 19 A 5 75 1 8 1 0 0 0 4 0 4 0 1 0 0 0 0 0 0 0 75 0 0 1.007 33 0.59
20 20 A 0 0 0 0 0 0 0 0 97 0 3 0 0 0 0 0 0 0 0 0 75 0 0 0.123 4 0.94
21 21 A 0 0 0 0 0 0 0 0 99 1 0 0 0 0 0 0 0 0 0 0 75 0 0 0.071 2 0.98
22 22 A 1 96 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 75 0 0 0.212 7 0.92
23 23 A 0 1 0 0 0 0 0 0 1 0 1 0 0 3 5 1 84 3 0 0 75 0 0 0.726 24 0.69
24 24 A 0 0 0 0 0 0 0 99 0 0 0 0 0 0 0 0 0 0 0 1 75 0 0 0.071 2 0.99
25 25 A 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 88 9 1 0 0 75 0 0 0.449 14 0.73
26 26 A 0 0 0 0 0 0 0 0 0 0 25 75 0 0 0 0 0 0 0 0 75 0 0 0.566 18 0.57
27 27 A 8 0 92 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 75 0 0 0.279 9 0.96
28 28 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 88 0 9 0 0 75 0 0 0.430 14 0.84
29 29 A 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 77 7 1 12 75 0 0 0.806 26 0.67
30 30 A 0 0 0 0 4 0 96 0 0 0 0 0 0 0 0 0 0 0 0 0 75 0 0 0.168 5 0.99
31 31 A 23 0 0 0 0 0 0 0 71 0 0 7 0 0 0 0 0 0 0 0 75 0 0 0.762 25 0.49
32 32 A 0 93 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 75 0 0 0.278 9 0.94
33 33 A 0 0 0 0 0 0 0 0 3 0 1 0 0 0 0 1 0 95 0 0 75 0 0 0.264 8 0.87
34 34 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 92 5 3 0 0 0 75 0 0 0.330 11 0.87
35 35 A 4 84 1 0 0 0 0 0 1 0 1 8 0 0 0 0 0 0 0 0 75 0 0 0.650 21 0.61
36 36 A 0 21 0 0 79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 75 0 0 0.518 17 0.90
37 37 A 0 0 0 0 0 0 0 1 1 89 1 3 0 0 0 0 3 0 0 1 75 2 6 0.524 17 0.78
38 38 A 1 0 0 0 0 0 0 56 8 3 11 3 0 0 0 3 0 0 5 10 73 0 0 1.510 50 0.44
39 39 A 1 1 0 1 0 0 0 5 1 1 4 0 0 0 0 0 3 4 5 72 75 3 4 1.191 39 0.56
40 40 A 11 4 1 3 1 1 0 1 43 1 4 22 0 0 0 1 0 0 1 3 72 0 0 1.821 60 0.28
41 41 A 0 0 0 0 0 0 0 4 1 0 5 3 0 0 1 1 0 8 7 69 75 1 0 1.191 39 0.62
42 42 A 0 0 0 0 0 0 0 15 53 1 1 4 0 0 0 0 1 14 4 7 74 6 4 1.508 50 0.41
43 43 A 0 0 0 0 0 0 0 3 3 0 0 1 0 0 0 0 3 21 15 54 68 0 0 1.312 43 0.63
44 44 A 0 1 1 0 0 0 0 0 4 0 3 1 0 1 16 1 59 9 0 3 75 0 0 1.437 47 0.42
45 45 A 1 0 0 0 0 0 0 0 89 1 0 5 0 0 0 1 0 0 0 1 75 0 0 0.487 16 0.84
46 46 A 1 16 0 0 0 80 0 0 1 0 1 0 0 0 0 0 0 0 0 0 75 0 0 0.644 21 0.59
47 47 A 0 1 0 1 0 0 1 0 4 0 1 4 0 7 8 11 41 15 3 3 75 0 0 1.949 65 0.33
48 48 A 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 1 8 76 0 8 75 0 0 0.851 28 0.69
49 49 A 0 99 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 75 0 0 0.071 2 0.98
50 50 A 0 0 1 0 0 0 0 0 1 0 1 0 0 0 9 67 4 16 0 0 75 0 0 1.086 36 0.50
51 51 A 1 0 1 0 0 0 0 3 25 0 3 49 0 0 0 3 0 3 7 5 75 0 0 1.535 51 0.41
52 52 A 8 64 0 8 19 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 75 0 0 1.061 35 0.76
53 53 A 7 79 3 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 75 0 0 0.720 24 0.89
54 54 A 0 1 0 0 0 0 0 52 7 0 0 4 0 0 4 7 3 4 17 1 75 0 0 1.603 53 0.33
55 55 A 0 1 0 1 0 0 0 4 9 15 1 32 0 0 1 1 1 13 19 0 75 0 0 1.924 64 0.24
56 56 A 0 0 0 0 0 0 0 0 1 0 0 0 0 0 99 0 0 0 0 0 75 0 0 0.071 2 0.95
57 57 A 20 3 76 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 75 0 0 0.685 22 0.83
58 58 A 1 0 0 0 0 0 0 0 11 0 8 0 0 16 0 4 4 16 33 7 75 0 0 1.889 63 0.32
59 59 A 0 0 0 0 0 0 0 0 11 0 4 0 0 0 1 1 12 45 5 20 75 0 0 1.574 52 0.45
60 60 A 0 0 1 0 0 0 0 77 21 0 0 0 0 0 0 0 0 0 0 0 75 0 0 0.586 19 0.68
61 61 A 1 72 3 1 0 0 0 0 1 0 1 0 0 1 4 5 0 8 1 0 75 0 0 1.166 38 0.29
62 62 A 1 0 0 0 0 0 0 0 64 0 3 5 0 0 8 3 7 5 3 1 75 0 0 1.386 46 0.36
63 63 A 0 0 0 0 0 0 0 96 0 0 0 0 0 0 1 0 0 3 0 0 75 0 0 0.193 6 0.92
64 64 A 1 0 0 0 0 0 0 4 1 0 0 0 0 4 5 53 3 8 13 7 75 0 0 1.612 53 0.40
65 65 A 61 17 8 0 8 0 1 1 0 0 0 3 0 0 0 0 0 0 0 0 75 0 0 1.219 40 0.59
66 66 A 4 1 1 0 0 0 0 0 7 0 86 0 0 0 0 0 0 0 0 0 74 0 0 0.554 18 0.66
67 67 A 3 0 0 0 0 0 0 1 16 1 5 58 0 1 0 3 1 4 3 3 74 0 0 1.521 50 0.39
68 68 A 0 5 0 0 0 0 1 3 0 0 1 0 0 0 4 84 1 0 0 0 74 0 0 0.708 23 0.64
69 69 A 0 0 0 0 0 0 0 1 0 1 69 20 0 0 0 0 0 0 5 3 74 0 0 0.952 31 0.60
70 70 A 43 0 45 3 7 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 74 0 0 1.119 37 0.68
71 71 A 0 1 0 0 0 0 0 35 3 0 30 0 0 0 0 0 3 7 11 11 74 0 0 1.645 54 0.40
72 72 A 0 0 0 0 0 0 0 0 5 0 3 5 0 0 0 4 9 57 0 16 74 0 0 1.383 46 0.58
73 73 A 3 0 96 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 74 0 0 0.195 6 0.94
74 74 A 8 74 0 0 12 0 1 0 1 0 0 1 0 0 0 0 0 1 0 0 73 0 0 0.922 30 0.69
75 75 A 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 1 14 8 67 73 0 0 1.086 36 0.64
76 76 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 89 0 5 73 0 0 0.452 15 0.88
77 77 A 4 0 0 0 0 0 0 0 6 0 0 6 0 0 0 1 0 82 0 1 72 0 0 0.736 24 0.56
78 78 A 3 78 12 0 0 0 1 0 0 1 0 0 0 4 0 0 0 0 0 0 69 0 0 0.803 26 0.65
79 79 A 0 0 5 0 0 0 0 14 23 0 27 21 0 2 0 2 5 0 0 3 66 0 0 1.806 60 0.30
80 80 A 0 0 0 0 0 0 0 23 2 0 2 3 0 0 2 3 3 62 0 0 60 0 0 1.183 39 0.55
81 81 A 0 0 0 0 0 0 0 38 3 0 5 2 0 2 2 2 2 9 5 31 58 0 0 1.715 57 0.45
82 82 A 0 0 0 0 0 2 0 0 0 4 12 0 0 2 73 2 6 0 0 0 51 0 0 1.010 33 0.57
83 83 A 0 0 0 0 0 0 0 3 86 0 5 5 0 0 0 0 0 0 0 0 37 0 0 0.539 17 0.79
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
48 43 43 1 nPd
56 43 43 1 dGd
58 43 43 1 eEe
63 40 40 1 pMt
63 43 44 1 dEq
69 38 38 1 aKk
70 38 38 5 gDAPALd
71 38 38 4 pPLPKd
71 40 44 1 eTl
72 36 37 5 qPLPEIn
73 36 37 4 qPVPEt
73 38 43 1 nVk
74 38 38 5 pPEADNn
74 40 45 1 qLf
//