Complet list of 2a4h hssp file
Complete list of 2a4h.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 2A4H
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-16
HEADER OXIDOREDUCTASE 28-JUN-05 2A4H
COMPND MOL_ID: 1; MOLECULE: SELENOPROTEIN SEP15; CHAIN: A; FRAGMENT: REDOX DO
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; ORGANISM_COMM
AUTHOR A.D.FERGUSON,V.M.LABUNSKYY,D.E.FOMENKO,Y.CHELLIAH, C.A.AMEZCUA,J.RIZO,
DBREF 2A4H A 62 178 UNP Q9VVJ7 Q9VVJ7_DROME 62 178
SEQLENGTH 126
NCHAIN 1 chain(s) in 2A4H data set
NALIGN 34
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : A0APL2_DROME 1.00 1.00 11 126 63 178 116 0 0 178 A0APL2 CG7484 protein OS=Drosophila melanogaster GN=CG7484 PE=4 SV=1
2 : A0APL6_DROME 1.00 1.00 11 126 63 178 116 0 0 178 A0APL6 CG7484 protein OS=Drosophila melanogaster GN=CG7484 PE=4 SV=1
3 : C0MK69_DROME 1.00 1.00 11 126 63 178 116 0 0 178 C0MK69 CG7484-PA OS=Drosophila melanogaster GN=CG7484 PE=4 SV=1
4 : C0MK70_DROME 1.00 1.00 11 126 63 178 116 0 0 178 C0MK70 CG7484-PA OS=Drosophila melanogaster GN=CG7484 PE=4 SV=1
5 : Q9VVJ7_DROME2A4H 1.00 1.00 11 126 63 178 116 0 0 178 Q9VVJ7 CG7484 OS=Drosophila melanogaster GN=CG7484 PE=1 SV=2
6 : A0APL1_DROME 0.99 1.00 11 126 63 178 116 0 0 178 A0APL1 CG7484 protein OS=Drosophila melanogaster GN=CG7484 PE=4 SV=1
7 : A0APM0_DROSI 0.98 1.00 11 126 63 178 116 0 0 178 A0APM0 CG7484 protein OS=Drosophila simulans GN=CG7484 PE=4 SV=1
8 : B4HKV3_DROSE 0.98 1.00 11 126 63 178 116 0 0 178 B4HKV3 GM25714 OS=Drosophila sechellia GN=Dsec\GM25714 PE=4 SV=1
9 : B4PJK6_DROYA 0.98 0.99 11 126 63 178 116 0 0 178 B4PJK6 GE19924 OS=Drosophila yakuba GN=Dyak\GE19924 PE=4 SV=1
10 : B3NHS6_DROER 0.97 0.98 11 126 63 177 116 1 1 177 B3NHS6 GG13628 OS=Drosophila erecta GN=Dere\GG13628 PE=4 SV=1
11 : B3N2M8_DROAN 0.94 1.00 11 126 63 178 116 0 0 178 B3N2M8 GF13902 OS=Drosophila ananassae GN=Dana\GF13902 PE=4 SV=1
12 : B4KZI8_DROMO 0.93 0.99 13 126 69 181 114 1 1 181 B4KZI8 GI12390 OS=Drosophila mojavensis GN=Dmoj\GI12390 PE=4 SV=1
13 : B4GRL9_DROPE 0.91 0.97 10 126 62 179 118 1 1 179 B4GRL9 GL24911 OS=Drosophila persimilis GN=Dper\GL24911 PE=4 SV=1
14 : Q2M0H5_DROPS 0.91 0.97 10 126 62 178 117 0 0 178 Q2M0H5 GA20385 OS=Drosophila pseudoobscura pseudoobscura GN=Dpse\GA20385 PE=4 SV=1
15 : B4LEY7_DROVI 0.89 0.97 13 126 65 177 114 1 1 177 B4LEY7 GJ12280 OS=Drosophila virilis GN=Dvir\GJ12280 PE=4 SV=1
16 : B4N6K9_DROWI 0.88 0.94 13 126 902 1021 120 2 6 1021 B4N6K9 GK12298 OS=Drosophila willistoni GN=Dwil\GK12298 PE=4 SV=1
17 : B4J3J7_DROGR 0.86 0.93 13 126 69 185 118 2 5 185 B4J3J7 GH16126 OS=Drosophila grimshawi GN=Dgri\GH16126 PE=4 SV=1
18 : W8BXL0_CERCA 0.77 0.90 14 115 30 134 105 1 3 141 W8BXL0 15 kDa selenoprotein OS=Ceratitis capitata GN=SEP15 PE=2 SV=1
19 : W8C424_CERCA 0.75 0.88 14 126 77 188 116 2 7 188 W8C424 15 kDa selenoprotein OS=Ceratitis capitata GN=SEP15 PE=2 SV=1
20 : D3TQS6_GLOMM 0.70 0.88 11 126 62 177 118 2 4 177 D3TQS6 Selenoprotein OS=Glossina morsitans morsitans PE=2 SV=1
21 : B0WAC9_CULQU 0.65 0.79 20 126 74 165 107 1 15 165 B0WAC9 15 kDa selenoprotein OS=Culex quinquefasciatus GN=CpipJ_CPIJ003981 PE=4 SV=1
22 : Q16IZ9_AEDAE 0.64 0.79 20 126 75 166 107 1 15 166 Q16IZ9 AAEL013494-PA OS=Aedes aegypti GN=AAEL013494 PE=4 SV=1
23 : Q7Q7W5_ANOGA 0.64 0.77 20 126 73 163 107 1 16 163 Q7Q7W5 AGAP004986-PA OS=Anopheles gambiae GN=AGAP004986 PE=4 SV=2
24 : Q8WR40_ANOGA 0.64 0.76 20 126 73 163 107 1 16 163 Q8WR40 Selenoprotein (Fragment) OS=Anopheles gambiae PE=2 SV=1
25 : T1DP83_ANOAQ 0.62 0.78 21 126 74 163 106 1 16 163 T1DP83 Putative selenoprotein OS=Anopheles aquasalis PE=2 SV=1
26 : N6TP72_DENPD 0.60 0.75 20 126 70 159 107 1 17 159 N6TP72 Uncharacterized protein (Fragment) OS=Dendroctonus ponderosae GN=D910_05165 PE=4 SV=1
27 : I4DMS2_PAPPL 0.58 0.77 12 126 68 168 115 1 14 168 I4DMS2 Simila to CG7484 OS=Papilio polytes PE=2 SV=1
28 : C4WSA5_ACYPI 0.57 0.72 20 120 72 155 101 1 17 160 C4WSA5 ACYPI003278 protein OS=Acyrthosiphon pisum GN=ACYPI003278 PE=2 SV=1
29 : D6WEH9_TRICA 0.57 0.73 12 126 66 163 115 1 17 163 D6WEH9 Putative uncharacterized protein OS=Tribolium castaneum GN=TcasGA2_TC003269 PE=4 SV=1
30 : E0VEG0_PEDHC 0.57 0.71 20 126 76 168 107 2 14 168 E0VEG0 15 kDa selenoprotein, putative OS=Pediculus humanus subsp. corporis GN=Phum_PHUM132180 PE=4 SV=1
31 : H9IUL7_BOMMO 0.57 0.78 12 126 64 164 115 2 14 164 H9IUL7 Uncharacterized protein OS=Bombyx mori GN=Bmo.1792 PE=4 SV=1
32 : I4DKN8_PAPXU 0.57 0.77 12 126 70 170 115 1 14 170 I4DKN8 Similar to CG7484 OS=Papilio xuthus PE=2 SV=1
33 : V5IAF9_ANOGL 0.57 0.73 12 126 64 162 115 1 16 162 V5IAF9 Selenoprotein OS=Anoplophora glabripennis GN=SEP15 PE=4 SV=1
34 : S4PGE6_9NEOP 0.56 0.76 12 126 68 168 115 1 14 168 S4PGE6 15 kDa selenoprotein OS=Pararge aegeria PE=4 SV=1
## ALIGNMENTS 1 - 34
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 53 A M 0 0 205 1 0
2 54 A A - 0 0 104 1 0
3 55 A S S S- 0 0 110 1 0
4 56 A H S S+ 0 0 133 1 0
5 57 A H - 0 0 118 1 0
6 58 A H S S- 0 0 148 1 0
7 59 A H S S+ 0 0 160 1 0
8 60 A H S S- 0 0 110 1 0
9 61 A H S S- 0 0 202 1 0
10 62 A L S S- 0 0 166 3 0 LL
11 63 A D - 0 0 122 15 0 DDDDDDDDDDD DD D
12 64 A Q - 0 0 187 21 41 QQQQQQQQQQQ QQ Q E E EEED
13 65 A Q - 0 0 149 25 84 QQQQQQQQQQQQQQQEQ L S S SSNS
14 66 A P - 0 0 91 27 48 PPPPPPPPPPPPPPPPTPPP A A AAGA
15 67 A A - 0 0 108 27 48 AAAAAAAAAAAAAAAAAAAA T T STTP
16 68 A A S S+ 0 0 77 27 72 AAAAAAAAAAAAAAASAVVA N V KNSK
17 69 A Q S S- 0 0 114 27 39 QQQQQQQQQQQQQQQQQQQH E E EEEE
18 70 A R - 0 0 148 27 30 RRRRRRRRRRRRRRRRRRRR K K KKKK
19 71 A T - 0 0 72 27 74 TTTTTTTTTTTTTTTTTRRR K K KKVK
20 72 A Y - 0 0 28 34 3 YYYYYYYYYYYYYYYYYWWYYYYY YYYYYYYYY
21 73 A A S S+ 0 0 60 35 35 AAAAAAAAAAAAAAAAAPPPPPPPPAAAAAAAHA
22 74 A K + 0 0 74 35 33 KKKKKKKKKKKKKKKKKKKMKRAAKKRKKKRRKR
23 75 A A B -a 53 0A 0 35 0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
24 76 A I E -B 66 0B 15 35 29 IIIIIIIIIIIIIIIIIIIIVVVVVVIRVRIIVI
25 77 A L E -B 65 0B 0 35 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
26 78 A E E +B 64 0B 47 35 0 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
27 79 A V - 0 0 1 35 0 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
28 80 A a - 0 0 20 35 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
29 81 A T S S+ 0 0 49 35 5 TTTTTTTTTTTTTTTTTTTTTTTTSTTTTTTTTT
30 82 A a > + 0 0 88 35 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
31 83 A K T 3> + 0 0 15 35 0 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
32 84 A F T 34 S+ 0 0 93 35 0 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
33 85 A R T <4 S+ 0 0 237 35 78 RRRRRRRRRRRRRRRRRRRRGGGGGGPGGGPPGP
34 86 A A T 4 S+ 0 0 68 35 0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
35 87 A Y >X + 0 0 59 35 0 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
36 88 A P T 34 S+ 0 0 67 35 0 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
37 89 A Q T 3> S+ 0 0 113 35 0 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
38 90 A I H X> S+ 0 0 2 35 0 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
39 91 A Q H 3X S+ 0 0 26 35 10 QQQQQQQQQQQQQQQQQEEQQQQQQQQQQEQQQQ
40 92 A A H 3> S+ 0 0 40 35 0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
41 93 A F H S+ 0 0 22 35 0 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
42 94 A I H <5S+ 0 0 19 35 10 IIIIIIIIIIIIIIIIVIIIVIIIIIVIIIVVIV
43 95 A Q H <5S+ 0 0 124 35 48 QQQQQQQQQQQQQQQQQKKKKKKKKKKKKKKKKK
44 96 A S H <5S- 0 0 56 35 0 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
45 97 A G T X5S+ 0 0 23 35 43 GGGGGGGGGGGGGGGGGGGGDDDDDDDDSDDDHD
46 98 A R T >44 S+ 0 0 2 35 0 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
48 100 A A G 34 S+ 0 0 86 35 33 AAAAAAAAAASAAAAAAAAALQAAAAANLTAAAA
49 101 A K G << S+ 0 0 126 35 11 KKKKKKKKKKKKKKKKKKKKKKKKKKKKQKKKQK
50 102 A F X - 0 0 10 35 1 FFFFFFFFFFFFFFFFFYYFFFFFFFFYFFFFFF
51 103 A P T 3 S+ 0 0 32 35 20 PPPPPPPPPPPPPPPPPSSRPPPPPQPPPPPPPP
52 104 A N T 3 S+ 0 0 22 35 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
53 105 A L B < -a 23 0A 13 35 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
54 106 A Q - 0 0 105 35 48 QQQQQQQQQQQQQQQQQQQTTTTTTQQTQTQQQQ
55 107 A I - 0 0 20 35 0 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
56 108 A K - 0 0 77 35 10 KKKKKKKKKKKKKKKKKKKRKKKKKKKRKRKKKK
57 109 A Y - 0 0 140 35 0 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
58 110 A V - 0 0 14 35 13 VVVVVVVVVVVVVVVVVMMVVVVVLVVVVVVVVL
59 111 A R S S- 0 0 255 35 0 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
60 112 A G S S+ 0 0 43 35 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
61 113 A L - 0 0 106 35 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
62 114 A D - 0 0 82 35 0 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
63 115 A P + 0 0 2 35 0 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
64 116 A V E -BC 26 79B 15 35 22 VVVVVVVVVVVIVVLIIVVIIIIILIILIIIIII
65 117 A V E -BC 25 78B 1 35 16 VVVVVVVVVVVVVVVVVVVIVVVVVIIIIIIIII
66 118 A K E -BC 24 77B 48 35 0 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
67 119 A L E + C 0 76B 0 35 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
68 120 A L - 0 0 11 35 23 LLLLLLLLLLLLLLLLLLLLMMMMMYLMYMLLYL
69 121 A D - 0 0 95 35 0 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
70 122 A A S S+ 0 0 71 35 77 AAAAAAAAAAAADAAAASSSEEEEEKKSKKKKKK
71 123 A S S S- 0 0 127 35 72 SSSSSSSSSSSSAASSRSSNRAQQHDDSDEDDDD
72 124 A G S S+ 0 0 36 35 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
73 125 A K - 0 0 151 35 79 KKKKKKKKKKKKKKKKKNNNQNNTNHINTNIIHI
74 126 A V - 0 0 35 35 10 VVVVVVVVVVVVVVVVVVVVVVVVVLVVLVVVLV
75 127 A Q S S+ 0 0 61 35 53 QQQQQQQQQQQQQQQQLQQKKKKKKQRQQVKRQR
76 128 A E E +C 67 0B 55 35 7 EEEEEEEEEEEEEEEEEEEEEEEEEEDEEEDDEE
77 129 A T E +C 66 0B 64 35 6 TTTTTTTTTTTTTTTTTTTTTTTTTTTVTTTTTT
78 130 A L E -C 65 0B 38 35 22 LLLLLLLLLLLLLLLLLLLLLLLLLVVLVLVVVV
79 131 A S E -C 64 0B 49 35 42 SSSSSSSSSSSSSSSSSSSSSSSSSAAAAAAAAA
80 132 A I + 0 0 2 35 0 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
81 133 A T S S- 0 0 32 35 56 TTTTTTTTTTTTTTTTTTTTTTNNTEEEEDEEEE
82 134 A K S S+ 0 0 166 35 3 KKKKKKKKKKKKKKKKKKKKKKKKKKKRKKKKKK
83 135 A W S S- 0 0 171 35 0 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
84 136 A N S S- 0 0 86 35 4 NNNNNNNNNNNNNNNNNNNNNNNNNNNDNNNNNN
85 137 A T + 0 0 17 35 0 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
86 138 A D S >> S+ 0 0 108 35 0 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
87 139 A T H 3> S+ 0 0 57 35 42 TTTTTTTTTTTTTTTTTTTTTTTTTSSTSSSSSS
88 140 A V H 3> S+ 0 0 10 35 0 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
89 141 A E H <> S+ 0 0 43 35 22 EEEEEEEEEEEEEEEEEDDEQQQQQDEDEEEEEE
90 142 A E H X S+ 0 0 105 35 0 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
91 143 A F H X S+ 0 0 40 35 0 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
92 144 A F H X S+ 0 0 0 35 11 FFFFFFFFFFFFFFFFFFFFFFFFFLLLLLLLLL
93 145 A E H < S+ 0 0 72 35 46 EEEEEEEEEEEEEEEEEEEEEEEEEQNSKKNNKK
94 146 A T H < S+ 0 0 42 35 6 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA
95 147 A H H < S+ 0 0 54 35 26 HHHHHHHHHHHHHHHHHHHHRRRRRHHHHYHHHH
96 148 A L S < S- 0 0 6 35 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
97 149 A A - 0 0 34 35 66 AAAAAAAAAAAAAASASEEETTAAADEEQEDEVV
98 150 A K + 0 0 96 35 21 KKKKKKKKKKKKKKKKKKKKKKKKKDKRQPKKKK
99 151 A D - 0 0 84 35 77 DDDDDDDDDDEEDDEEEPPHMVVVVGGIDVEGIE
100 152 A G - 0 0 59 35 58 GGGGGGGGGGGGGGGGGAAETAEEDDEEDNHEDE
101 153 A A S S+ 0 0 92 35 69 AAAAATAAVVGTKKGaaggsDDDDDLDDDNDDDD
102 154 A G + 0 0 42 21 18 GGGGGGGGGGGGGGGggggn..............
103 155 A K - 0 0 119 21 0 KKKKKKKKKKKKKKKkKKKK..............
104 156 A N S S+ 0 0 171 21 54 NNNNNNSSSSSSSSSSNSSQ..............
105 157 A S - 0 0 62 21 27 SSSSSSSSSSSSSSSSSAAS..............
106 158 A Y + 0 0 200 21 1 YYYYYYYYYYYYYYYYYYYF..............
107 159 A S + 0 0 112 21 0 SSSSSSSSSSSSSSSSSSSS..............
108 160 A V S S- 0 0 124 21 0 VVVVVVVVVVVVVVVVVVVV..............
109 161 A V - 0 0 112 21 6 VVVVVVVVVVVVVVVVVVVI..............
110 162 A E - 0 0 142 21 8 EEEEEEEEEEEEEE.EEEEE..........D...
111 163 A D S S+ 0 0 176 22 22 DDDDDDDDDDDDEEEDDEEE..........E...
112 164 A A - 0 0 54 23 63 AAAAAAAAAAAAaADAAEEE.........VP...
113 165 A D S S- 0 0 167 17 38 DDDDDDDDDDD.dVAN.D................
114 166 A G S S+ 0 0 71 18 49 GGGGGGGGG.DSDDDDDN................
115 167 A D + 0 0 123 20 7 DDDDDDDDDDDDDDDDGD.D..............
116 168 A D + 0 0 77 22 12 DDDDDDDDDDEDDDEDE .D......D....E.D
117 169 A D - 0 0 117 26 11 DDDDDDDDDDEDDDDDE DDDD....D..N.D.D
118 170 A E + 0 0 165 30 67 EEEEEEDDEEEDDDEAE NDDNDDT.R..L.RDR
119 171 A D - 0 0 101 34 18 DDDDDDDDDDDDDDDDD DDDDDDDDSDDDDSDG
120 172 A Y - 0 0 216 34 2 YYYYYYYYYYYFYYYYY YFYYYYFYYYYYFYYF
121 173 A L - 0 0 146 33 3 LLLLLLLLLLLLLLLLL LLLLLILLL LLLLLL
122 174 A R - 0 0 219 33 48 RRRRRRRRRRRRLLRRR EKRLKKKKK RKKKRK
123 175 A T - 0 0 111 33 6 TTTTTTTTTTTTTTTTT TSTTTTTTT TTTTTT
124 176 A N - 0 0 131 33 0 NNNNNNNNNNNNNNNNN NNNNNNNNN NNNNNN
125 177 A R 0 0 218 33 59 RRRRRRRRRRRRKKRRR RMRRRRQQQ MLRQML
126 178 A I 0 0 227 33 14 IIIIIIIIIIIIVVVII IVVVVVVII IVIIVI
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 53 A 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
2 54 A 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
3 55 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
4 56 A 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 1 0 0 0.000 0 1.00
5 57 A 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 1 0 0 0.000 0 1.00
6 58 A 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 1 0 0 0.000 0 1.00
7 59 A 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 1 0 0 0.000 0 1.00
8 60 A 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 1 0 0 0.000 0 1.00
9 61 A 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 1 0 0 0.000 0 1.00
10 62 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0.000 0 1.00
11 63 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 15 0 0 0.000 0 1.00
12 64 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 71 24 0 5 21 0 0 0.727 24 0.59
13 65 A 0 4 0 0 0 0 0 0 0 0 20 0 0 0 0 0 68 4 4 0 25 0 0 0.970 32 0.16
14 66 A 0 0 0 0 0 0 0 4 19 74 0 4 0 0 0 0 0 0 0 0 27 0 0 0.779 25 0.51
15 67 A 0 0 0 0 0 0 0 0 78 4 4 15 0 0 0 0 0 0 0 0 27 0 0 0.722 24 0.52
16 68 A 11 0 0 0 0 0 0 0 67 0 7 0 0 0 0 7 0 0 7 0 27 0 0 1.093 36 0.27
17 69 A 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 74 22 0 0 27 0 0 0.679 22 0.61
18 70 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 78 22 0 0 0 0 27 0 0 0.530 17 0.70
19 71 A 4 0 0 0 0 0 0 0 0 0 0 67 0 0 11 19 0 0 0 0 27 0 0 0.949 31 0.26
20 72 A 0 0 0 0 0 6 94 0 0 0 0 0 0 0 0 0 0 0 0 0 34 0 0 0.224 7 0.96
21 73 A 0 0 0 0 0 0 0 0 74 23 0 0 0 3 0 0 0 0 0 0 35 0 0 0.660 22 0.64
22 74 A 0 0 0 3 0 0 0 0 6 0 0 0 0 0 14 77 0 0 0 0 35 0 0 0.743 24 0.67
23 75 A 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.000 0 1.00
24 76 A 23 0 71 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 35 0 0 0.741 24 0.71
25 77 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.000 0 1.00
26 78 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 35 0 0 0.000 0 1.00
27 79 A 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.000 0 1.00
28 80 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 35 0 0 0.000 0 1.00
29 81 A 0 0 0 0 0 0 0 0 0 0 3 97 0 0 0 0 0 0 0 0 35 0 0 0.130 4 0.95
30 82 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 35 0 0 0.000 0 1.00
31 83 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 35 0 0 0.000 0 1.00
32 84 A 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.000 0 1.00
33 85 A 0 0 0 0 0 0 0 29 0 11 0 0 0 0 60 0 0 0 0 0 35 0 0 0.912 30 0.22
34 86 A 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.000 0 1.00
35 87 A 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.000 0 1.00
36 88 A 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 35 0 0 0.000 0 1.00
37 89 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 35 0 0 0.000 0 1.00
38 90 A 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.000 0 1.00
39 91 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 91 9 0 0 35 0 0 0.293 9 0.89
40 92 A 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.000 0 1.00
41 93 A 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.000 0 1.00
42 94 A 17 0 83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.458 15 0.90
43 95 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49 51 0 0 0 35 0 0 0.693 23 0.52
44 96 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 35 0 0 0.000 0 1.00
45 97 A 0 0 0 0 0 0 0 60 0 0 3 0 0 3 0 0 0 0 0 34 35 0 0 0.877 29 0.57
46 98 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 97 3 0 0 0 0 35 0 0 0.130 4 0.96
47 99 A 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 35 0 0 0.000 0 1.00
48 100 A 0 6 0 0 0 0 0 0 83 0 3 3 0 0 0 0 3 0 3 0 35 0 0 0.726 24 0.66
49 101 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 94 6 0 0 0 35 0 0 0.219 7 0.89
50 102 A 0 0 0 0 91 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.293 9 0.99
51 103 A 0 0 0 0 0 0 0 0 0 89 6 0 0 0 3 0 3 0 0 0 35 0 0 0.474 15 0.80
52 104 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 35 0 0 0.000 0 1.00
53 105 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.000 0 1.00
54 106 A 0 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 77 0 0 0 35 0 0 0.538 17 0.52
55 107 A 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.000 0 1.00
56 108 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 91 0 0 0 0 35 0 0 0.293 9 0.90
57 109 A 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.000 0 1.00
58 110 A 89 6 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.435 14 0.86
59 111 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 35 0 0 0.000 0 1.00
60 112 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.000 0 1.00
61 113 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.000 0 1.00
62 114 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 35 0 0 0.000 0 1.00
63 115 A 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 35 0 0 0.000 0 1.00
64 116 A 46 9 46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.926 30 0.78
65 117 A 71 0 29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.598 19 0.84
66 118 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 35 0 0 0.000 0 1.00
67 119 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.000 0 1.00
68 120 A 0 71 0 20 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.773 25 0.76
69 121 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 35 0 0 0.000 0 1.00
70 122 A 0 0 0 0 0 0 0 0 49 0 11 0 0 0 0 23 0 14 0 3 35 0 0 1.316 43 0.23
71 123 A 0 0 0 0 0 0 0 0 9 0 51 0 0 3 6 0 6 3 3 20 35 0 0 1.506 50 0.27
72 124 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.000 0 1.00
73 125 A 0 0 11 0 0 0 0 0 0 0 0 6 0 6 0 51 3 0 23 0 35 0 0 1.356 45 0.20
74 126 A 91 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.293 9 0.90
75 127 A 3 3 0 0 0 0 0 0 0 0 0 0 0 0 9 20 66 0 0 0 35 0 0 1.012 33 0.47
76 128 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 91 0 9 35 0 0 0.293 9 0.92
77 129 A 3 0 0 0 0 0 0 0 0 0 0 97 0 0 0 0 0 0 0 0 35 0 0 0.130 4 0.93
78 130 A 20 80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.500 16 0.77
79 131 A 0 0 0 0 0 0 0 0 26 0 74 0 0 0 0 0 0 0 0 0 35 0 0 0.570 19 0.58
80 132 A 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.000 0 1.00
81 133 A 0 0 0 0 0 0 0 0 0 0 0 69 0 0 0 0 0 23 6 3 35 0 0 0.861 28 0.43
82 134 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 97 0 0 0 0 35 0 0 0.130 4 0.96
83 135 A 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.000 0 1.00
84 136 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 97 3 35 0 0 0.130 4 0.96
85 137 A 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 35 0 0 0.000 0 1.00
86 138 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 35 0 0 0.000 0 1.00
87 139 A 0 0 0 0 0 0 0 0 0 0 23 77 0 0 0 0 0 0 0 0 35 0 0 0.538 17 0.57
88 140 A 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.000 0 1.00
89 141 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 74 0 11 35 0 0 0.747 24 0.77
90 142 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 35 0 0 0.000 0 1.00
91 143 A 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.000 0 1.00
92 144 A 0 26 0 0 74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.570 19 0.88
93 145 A 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 11 3 74 9 0 35 0 0 0.882 29 0.54
94 146 A 0 0 0 0 0 0 0 0 3 0 0 97 0 0 0 0 0 0 0 0 35 0 0 0.130 4 0.94
95 147 A 0 0 0 0 0 0 3 0 0 0 0 0 0 83 14 0 0 0 0 0 35 0 0 0.535 17 0.74
96 148 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.000 0 1.00
97 149 A 6 0 0 0 0 0 0 0 54 0 6 6 0 0 0 0 3 20 0 6 35 0 0 1.409 47 0.34
98 150 A 0 0 0 0 0 0 0 0 0 3 0 0 0 0 3 89 3 0 0 3 35 0 0 0.514 17 0.78
99 151 A 14 0 6 3 0 0 0 9 0 6 0 0 0 3 0 0 0 20 0 40 35 0 0 1.707 56 0.23
100 152 A 0 0 0 0 0 0 0 51 9 0 0 3 0 3 0 0 0 20 3 11 35 0 0 1.427 47 0.42
101 153 A 6 3 0 0 0 0 0 11 29 0 3 6 0 0 0 6 0 0 3 34 35 14 5 1.768 59 0.31
102 154 A 0 0 0 0 0 0 0 95 0 0 0 0 0 0 0 0 0 0 5 0 21 0 1 0.191 6 0.82
103 155 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 21 0 0 0.000 0 1.00
104 156 A 0 0 0 0 0 0 0 0 0 0 57 0 0 0 0 0 5 0 38 0 21 0 0 0.832 27 0.45
105 157 A 0 0 0 0 0 0 0 0 10 0 90 0 0 0 0 0 0 0 0 0 21 0 0 0.314 10 0.73
106 158 A 0 0 0 0 5 0 95 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0.191 6 0.98
107 159 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 21 0 0 0.000 0 1.00
108 160 A 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0.000 0 1.00
109 161 A 95 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 1 0 0.191 6 0.93
110 162 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 95 0 5 21 0 0 0.191 6 0.91
111 163 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32 0 68 22 0 0 0.625 20 0.77
112 164 A 4 0 0 0 0 0 0 0 74 4 0 0 0 0 0 0 0 13 0 4 23 6 1 0.898 29 0.37
113 165 A 6 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 6 82 17 1 0 0.660 22 0.62
114 166 A 0 0 0 0 0 0 0 56 0 0 6 0 0 0 0 0 0 0 6 33 18 0 0 1.014 33 0.50
115 167 A 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 95 20 0 0 0.199 6 0.92
116 168 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 82 22 0 0 0.474 15 0.87
117 169 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 88 26 0 0 0.431 14 0.88
118 170 A 0 3 0 0 0 0 0 0 3 0 0 3 0 0 10 0 0 40 7 33 30 0 0 1.484 49 0.33
119 171 A 0 0 0 0 0 0 0 3 0 0 6 0 0 0 0 0 0 0 0 91 34 0 0 0.355 11 0.82
120 172 A 0 0 0 0 15 0 85 0 0 0 0 0 0 0 0 0 0 0 0 0 34 0 0 0.418 13 0.98
121 173 A 0 97 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33 0 0 0.136 4 0.97
122 174 A 0 9 0 0 0 0 0 0 0 0 0 0 0 0 58 30 0 3 0 0 33 0 0 1.004 33 0.51
123 175 A 0 0 0 0 0 0 0 0 0 0 3 97 0 0 0 0 0 0 0 0 33 0 0 0.136 4 0.94
124 176 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 33 0 0 0.000 0 1.00
125 177 A 0 6 0 9 0 0 0 0 0 0 0 0 0 0 67 6 12 0 0 0 33 0 0 1.084 36 0.40
126 178 A 33 0 67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33 0 0 0.637 21 0.86
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
13 104 165 1 aVd
16 90 991 4 aTPSSg
16 91 996 2 gGGk
17 90 158 4 aGGGGg
18 89 118 3 gKNSg
19 89 165 3 gKNSg
20 92 153 2 sLGn
//