Complet list of 1z9v hssp file
Complete list of 1z9v.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1Z9V
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-14
HEADER UNKNOWN FUNCTION 04-APR-05 1Z9V
COMPND MOL_ID: 1; MOLECULE: CONSERVED HYPOTHETICAL PROTEIN MTH0776; CHAIN: A;
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: METHANOTHERMOBACTER THERMAUTOTROPHICUS
AUTHOR G.AMEGBEY,P.STOTHARD,A.IAKOUNINE,A.YEE,C.H.ARROWSMITH,D.S.WISHART
DBREF 1Z9V A 2 102 GB 2621867 AAB85279 1 101
SEQLENGTH 102
NCHAIN 1 chain(s) in 1Z9V data set
NALIGN 34
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : O26870_METTH1Z9V 1.00 1.00 2 102 1 101 101 0 0 101 O26870 Conserved protein OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=MTH_776 PE=1 SV=1
2 : T2GIS2_METTF 0.99 1.00 2 102 1 101 101 0 0 101 T2GIS2 Uncharacterized protein OS=Methanothermobacter thermautotrophicus CaT2 GN=MTCT_0695 PE=4 SV=1
3 : D9PX17_METTM 0.84 0.96 2 101 1 100 100 0 0 101 D9PX17 Uncharacterized protein OS=Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) GN=MTBMA_c11720 PE=4 SV=1
4 : F6D466_METSW 0.70 0.90 2 100 1 99 99 0 0 101 F6D466 Uncharacterized conserved protein UCP006577 OS=Methanobacterium sp. (strain SWAN-1) GN=MSWAN_0448 PE=4 SV=1
5 : K2R9X2_METFO 0.69 0.89 4 99 2 97 96 0 0 100 K2R9X2 Uncharacterized protein OS=Methanobacterium formicicum DSM 3637 GN=A994_09618 PE=4 SV=1
6 : K6U0U3_9EURY 0.69 0.89 4 100 2 98 97 0 0 100 K6U0U3 Uncharacterized protein OS=Methanobacterium sp. Maddingley MBC34 GN=B655_1270 PE=4 SV=1
7 : U6ECZ4_9EURY 0.68 0.87 4 100 2 98 97 0 0 100 U6ECZ4 Uncharacterized protein OS=Methanobacterium sp. MB1 GN=MBMB1_0532 PE=4 SV=1
8 : A5UJD0_METS3 0.61 0.83 2 99 1 98 98 0 0 101 A5UJD0 Uncharacterized protein OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=Msm_0103 PE=4 SV=1
9 : B9AD47_METSM 0.61 0.83 2 99 1 98 98 0 0 101 B9AD47 Uncharacterized protein OS=Methanobrevibacter smithii DSM 2375 GN=METSMIALI_00270 PE=4 SV=1
10 : D2ZRI9_METSM 0.61 0.83 2 99 1 98 98 0 0 101 D2ZRI9 Uncharacterized protein OS=Methanobrevibacter smithii DSM 2374 GN=METSMIF1_03472 PE=4 SV=1
11 : R7PSA8_9EURY 0.61 0.83 2 99 1 98 98 0 0 101 R7PSA8 Uncharacterized protein OS=Methanobrevibacter smithii CAG:186 GN=BN522_00707 PE=4 SV=1
12 : E3GXM8_METFV 0.58 0.78 2 100 1 98 99 1 1 101 E3GXM8 Uncharacterized protein OS=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) GN=Mfer_0257 PE=4 SV=1
13 : F0TCE5_METSL 0.58 0.79 2 100 1 99 99 0 0 102 F0TCE5 Uncharacterized conserved protein UCP006577 OS=Methanobacterium sp. (strain AL-21) GN=Metbo_2198 PE=4 SV=1
14 : R9SIF7_9EURY 0.55 0.81 2 97 1 96 96 0 0 104 R9SIF7 Uncharacterized protein OS=Methanobrevibacter sp. AbM4 GN=Abm4_0609 PE=4 SV=1
15 : D3E4S7_METRM 0.51 0.84 2 100 1 99 99 0 0 102 D3E4S7 Uncharacterized protein OS=Methanobrevibacter ruminantium (strain ATCC 35063 / DSM 1093 / JCM 13430 / M1) GN=mru_1621 PE=4 SV=1
16 : Q8TY94_METKA 0.43 0.62 2 94 1 87 94 3 8 97 Q8TY94 Uncharacterized protein conserved in archaea OS=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=MK0411 PE=4 SV=1
17 : H8I4E7_METCZ 0.35 0.60 17 98 10 91 82 0 0 111 H8I4E7 Uncharacterized protein conserved in archaea OS=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) GN=Mtc_0948 PE=4 SV=1
18 : A2SPZ2_METLZ 0.34 0.59 16 102 9 92 87 2 3 94 A2SPZ2 Uncharacterized protein-like protein OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=Mlab_0222 PE=4 SV=1
19 : D1YW01_METPS 0.34 0.57 17 98 10 91 82 0 0 112 D1YW01 Uncharacterized protein OS=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) GN=MCP_0551 PE=4 SV=1
20 : F8AMW9_METOI 0.33 0.61 16 95 9 88 82 3 4 110 F8AMW9 Uncharacterized conserved protein UCP006577 OS=Methanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1) GN=Metok_0096 PE=4 SV=1
21 : Q46E54_METBF 0.33 0.59 18 101 11 95 86 2 3 124 Q46E54 Uncharacterized protein OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=Mbar_A0864 PE=4 SV=1
22 : A6USJ6_METVS 0.32 0.62 25 101 17 94 79 2 3 105 A6USJ6 Uncharacterised conserved protein UCP006577 OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=Mevan_1576 PE=4 SV=1
23 : G0H3P2_METMI 0.32 0.64 24 101 16 94 80 2 3 105 G0H3P2 Uncharacterized protein OS=Methanococcus maripaludis X1 GN=GYY_02765 PE=4 SV=1
24 : Q6LZD1_METMP 0.32 0.64 24 101 16 94 80 2 3 105 Q6LZD1 Putative uncharacterized protein OS=Methanococcus maripaludis (strain S2 / LL) GN=MMP0698 PE=4 SV=1
25 : A4FYA2_METM5 0.31 0.62 24 101 16 94 80 2 3 105 A4FYA2 Uncharacterized protein OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=MmarC5_0878 PE=4 SV=1
26 : A6VK05_METM7 0.31 0.61 24 101 16 94 80 2 3 105 A6VK05 Uncharacterised conserved protein UCP006577 OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=MmarC7_1725 PE=4 SV=1
27 : A9A785_METM6 0.31 0.64 24 101 16 94 80 2 3 105 A9A785 Uncharacterized protein OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=MmarC6_0186 PE=4 SV=1
28 : F4BV72_METCG 0.31 0.54 15 101 2 86 87 2 2 124 F4BV72 Uncharacterized protein OS=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) GN=MCON_0247 PE=4 SV=1
29 : L0HAP9_METFS 0.31 0.55 16 99 9 89 84 2 3 91 L0HAP9 Uncharacterized protein OS=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) GN=Metfor_0757 PE=4 SV=1
30 : M1Q9H4_METMZ 0.31 0.57 18 101 11 95 86 2 3 124 M1Q9H4 Uncharacterized protein OS=Methanosarcina mazei Tuc01 GN=MmTuc01_1474 PE=4 SV=1
31 : Q0W329_UNCMA 0.31 0.60 17 98 10 92 83 1 1 227 Q0W329 Uncharacterized protein OS=Uncultured methanogenic archaeon RC-I GN=UNCMA_10320 PE=4 SV=1
32 : Q8PX07_METMA 0.31 0.56 18 101 11 95 86 2 3 124 Q8PX07 Conserved protein OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=MM_1415 PE=4 SV=1
33 : Q8TUD8_METAC 0.31 0.56 17 101 10 95 87 2 3 124 Q8TUD8 Uncharacterized protein OS=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=MA_0129 PE=4 SV=1
34 : H1Z467_9EURY 0.30 0.59 17 98 10 89 82 1 2 90 H1Z467 Uncharacterized conserved protein UCP006577 OS=Methanoplanus limicola DSM 2279 GN=Metlim_1645 PE=4 SV=1
## ALIGNMENTS 1 - 34
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A H 0 0 143 1 0
2 2 A M - 0 0 112 14 0 MMMM MMMMMMMMM
3 3 A T B +A 24 0A 36 14 38 TTSS SSSSSSSST
4 4 A F + 0 0 75 17 16 FFFFFFFFFFFTFFFF
5 5 A C + 0 0 64 17 0 CCCCCCCCCCCCCCCC
6 6 A L >> + 0 0 20 17 11 LLILLLLLLLLILLLL
7 7 A E H 3> S+ 0 0 90 16 19 EEEEDDDDDDDEEDE.
8 8 A T H 34 S+ 0 0 52 16 32 TTTTTTTTTTTLQTT.
9 9 A Y H X>>S+ 0 0 13 16 12 YYYYYYYYYYYYHYY.
10 10 A L H 3<5S+ 0 0 74 16 0 LLLLLLLLLLLLLLL.
11 11 A Q T 3<5S+ 0 0 140 16 32 QQQQRRRQQQQRQQQ.
12 12 A Q T <45S- 0 0 134 17 28 QQQEEEEQQQQEQQQE
13 13 A S T <5S- 0 0 87 17 38 SSSSSSSSSSSVSSNE
14 14 A G < - 0 0 11 17 45 GGDEEEEDDDDEEEDR
15 15 A E + 0 0 7 18 48 EDDNDDNNNNNHDDDE K
16 16 A Y + 0 0 1 20 0 YYYYYYYYYYY.YYYY Y Y YY
17 17 A E S S- 0 0 6 26 32 EEEREEEEEEEEKKKEDEDE KE E EE
18 18 A I - 0 0 56 29 5 IIIIIIIIIIIIIIIIIIIII LIIIIIV
19 19 A H S S+ 0 0 108 29 60 HHHVHHHLLLLHLLLLLLLLH YVLLLLI
20 20 A M S S- 0 0 114 29 48 MMMIMMMAAAALILIMLALLL LLLLLLQ
21 21 A K - 0 0 60 29 75 KKTATTTSSSSRKSQASKSKQ ERDSDER
22 22 A R E - B 0 48A 3 29 61 RRRKRRRQQQQNNQRRHNHGR RDRHRKN
23 23 A A E + B 0 47A 0 29 75 AASTSSSAAAAATSSRQCQSI TAICITS
24 24 A G E +AB 3 46A 0 33 54 GGGGGGGGGGGKGGGPTST.S SSSSSSTSTSTS
25 25 A F S S+ 0 0 65 35 7 FFFFFFFFFFFFFFVFYFYFFFFFFFFFFFLFYF
26 26 A R S >> S+ 0 0 141 35 24 RRRKKKKKKKKKKKKDKKARKKKKKKKKKKRKKK
27 27 A E H 3> S+ 0 0 2 35 24 EEEEDDDDDDDDEDQDAEEEEEEEEEEEEEQEEE
28 28 A C H 3> S+ 0 0 17 35 43 CCCCCCCCCCCCACCCSASCACCCCCCASAGAAA
29 29 A A H <> S+ 0 0 29 35 79 AAAAAAAAAAAAKAYAEREARSSSSSSRRRERRR
30 30 A A H X S+ 0 0 1 35 67 AAARRRRRRRREKKKREEKEEDDDDDDEDEEEEE
31 31 A M H X S+ 0 0 10 35 43 MMFLFFFLLLLFVALYFIFYYYYYYYYFYYFYYY
32 32 A I H < S+ 0 0 85 35 3 IIIIIIIIIIIIIVIIIIIIIIIIIIIIIIIIIV
33 33 A E H >X S+ 0 0 110 35 63 EEEEEEERRRRKEEEELRLKEKKKKKKEREREEE
34 34 A K H 3< S+ 0 0 1 35 65 KKKKKKEFFFFKKDDSSKSNKQKKKKKKSKSKKK
35 35 A K T 3< S+ 0 0 103 35 46 KKKENNNKKKKKHNNKNNKNNHNNNNNNHNKNNN
36 36 A A T <4 S- 0 0 78 35 83 AAAAAAAAAAAASSAFYSYYSYYYYYYSFSYSSI
37 37 A R S < S- 0 0 198 35 78 RRKKPPPPPPPAPKKGWTWKDKKKKKKERDWDEK
38 38 A R E -c 81 0B 89 35 48 RRREEEEEEEEKKEENEEENENNNNNNEEEEEEE
39 39 A V E -c 82 0B 42 35 48 VVVVVVVIIIIVKIIITKTIVIIIIIIVSVTVVY
40 40 A V E -c 83 0B 74 35 87 VVVIVVIVVVVLVVIVYYYRYRRRRRRYIYYYYY
41 41 A H E -c 84 0B 40 35 77 HHHHHHHYYYYCYHHKYEYDYEEEEEEYDYYYYE
42 42 A I E S+c 85 0B 108 35 37 IIIVVVVVVVVVVIVLVVVLVFFFFFFVVVFVVV
43 43 A K S S- 0 0 120 35 59 KKRNNNKNNNNNNNNQEPENSNNNNNNEQSESDP
44 44 A P + 0 0 2 35 19 PPPPPPPAAAAPAPPPPPPAPPPPPPPPPPPPPP
45 45 A G + 0 0 18 35 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
46 46 A E E -B 24 0A 20 35 79 EEEEEEEEEEEEEDDEYFYEYDDDDDDYFYFYYY
47 47 A K E -B 23 0A 50 35 52 KKKKKKKEEEEKKKKETKTEKEEEEEERKKQKKK
48 48 A I E -B 22 0A 23 35 16 IIIIIIIIIIIIIVVIVLVVIIIILLIIVIVIII
49 49 A L S S- 0 0 12 35 17 LLLLVVVLLLLLLLLLLLLIFLLLLLLFFFLFFF
50 50 A G S S+ 0 0 26 35 59 GGGGGGGGGGGGGGGPGENEKEEEEEEKDKGKKD
51 51 A A S S- 0 0 58 35 76 AAAAAAASSSSTAIAgLKLGNGGGGGGDVDLDDV
52 52 A R + 0 0 88 21 15 RRRRRRRRRRRRRRRrRAR...........R...
53 53 A I - 0 0 74 33 54 IIIIIIIVVVVLIILAILIVYVVVVVVY.YTYY.
54 54 A I - 0 0 10 35 57 IIIIIIIIIIIIIIIILILMYMMMMMMFHYLYHY
55 55 A G S S+ 0 0 52 35 76 GGGGGGGGGGGGGGGGGGGLILLLLLLIVIGIII
56 56 A I S S- 0 0 46 35 34 IIILVIVIIIIIIVLYDISIIIIIIIIIIIEIII
57 57 A P + 0 0 120 35 57 PPPPPPPTTTTPPPPGEPEGGGGGGGGGGGGGGG
58 58 A P - 0 0 56 35 82 PPPPPPPPPPPPPPPKYPYKIVLLLLLVLVAVVV
59 59 A V - 0 0 62 34 65 VVVVVVVIIIIIIIIIV.VPPPPPPPPPPPIPPP
60 60 A P + 0 0 123 34 0 PPPPPPPPPPPPPPPPP.PPPPPPPPPPPPPPPP
61 61 A I E +D 74 0C 96 35 10 IIVIIIIIIIIIIVVVILIIIIIIIIIVIIVIII
62 62 A G E -D 73 0C 38 35 58 GGGGGGGGGGGGGGGAAIAPAPPPPPPASAAAAK
63 63 A I E +D 72 0C 75 35 31 IIIIIIIVVVVIIIIYVVVIMVVVVVVLIMIMMI
64 64 A D E +D 71 0C 123 35 55 DDDDNNNDDDDDNNNGEGEAGGAAAAAGGGEGGG
65 65 A E - 0 0 132 35 95 EEKEEEESSSSEDPEDDVDYAYYYYYYILADAVI
66 66 A E > - 0 0 106 35 53 EEEEEEEKKKKKDDEENANEKEDDDEDRDKnKKD
67 67 A R T 3 S+ 0 0 32 34 74 RRRKKKKKKKKNEKE.TNTGGEDEDDDGGGdGGG
68 68 A S T 3 S+ 0 0 21 34 56 SSSGGGGGGGGKSKG.NEDDNDDDDDDDDNDNND
69 69 A T S < S- 0 0 44 35 89 TTTTTTTTTTTRKTTWNKNYAFFYFFFEFATASA
70 70 A V - 0 0 38 35 24 VVVVIIIVVVVIVVIILLLILIVVVVVVVLILLV
71 71 A M E -D 64 0C 40 35 43 MMMMMMMLLLLMTCLVIVIIIIIIIIILVIIIII
72 72 A I E -D 63 0C 64 35 32 IIILLLIIIIIILIILIYLFFFFFFFFFFFFFFF
73 73 A P E -D 62 0C 6 35 25 PPPPPPPPPPPPPTTPPAPPPPPPPPPTPPTPTP
74 74 A Y E +D 61 0C 114 35 7 YYYYYYYYYYYYYYYIYYYYYYFFFFFYYYYYYY
75 75 A T - 0 0 10 35 5 TTTTTTTTTTTTTTTTTTTTTTTTTTTVTTTTTT
76 76 A K + 0 0 142 35 0 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
77 77 A P - 0 0 10 35 0 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
78 78 A C S S+ 0 0 93 35 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
79 79 A Y S S- 0 0 22 35 56 YYYYYYYYYYYYHNHHMHMYHYYYYYYHHHMHYH
80 80 A G - 0 0 6 35 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
81 81 A T E -c 38 0B 1 35 37 TTTTTTTTTTTTTTTSTTTSSTSSSSSTTSTSTT
82 82 A A E +c 39 0B 3 35 90 AAAAAAAAAAAFASAFFFFFFHHHHHHFFFFFFF
83 83 A V E -c 40 0B 18 35 27 VVVVTTTVVVVVVAAVVVVVVVVVVVVVLVVVVL
84 84 A V E -c 41 0B 10 35 30 VVIVVVVVVVVIVIIVVVVLLLLLLLLMLLLLLV
85 85 A E E -c 42 0B 71 35 72 EEEEEEEEEEEEEEEKRVRKSKRRRRRGRNRSTR
86 86 A L - 0 0 4 35 28 LLILVIVLLLLLLLIIIVIVIVVVVVVVVIIIVV
87 87 A P S S+ 0 0 77 35 51 PPPPPPPPPPPPPPPEKEKPDPPPPPPDEEPEDK
88 88 A V S S- 0 0 56 34 77 VVVIVVVVVVVVLVIVN.HLDMLLLLLSDNGNSE
89 89 A D > - 0 0 113 35 72 DDDEPPPDDDDDESSSVDVkennnnknSTdVdeA
90 90 A P G > S+ 0 0 51 33 84 PPEKPPPMMMMRKDQAPPPliimmmmm..iPitR
91 91 A E G > + 0 0 75 35 59 EEDDEEEAAAAKDEEEEEQKKDKKKKKEAKDKKD
92 92 A E G X> S+ 0 0 52 35 36 EEEEEEEEEEEEEEEEEGESESSSSSSEEEEEEE
93 93 A I H <> S+ 0 0 76 35 68 IIIIRRRIIIILIIILVVVEIHHHQQQIAIVIII
94 94 A E H <> S+ 0 0 148 35 42 EEENEEEEEEEEDNQEEDEKNEEEEEEAANKNDN
95 95 A R H X> S+ 0 0 106 34 42 RRRRKKNKKKKNKDN RHRKRKKKKKKRRRRRRK
96 96 A I H 3< S+ 0 0 20 33 28 IIIIIIIIIIIIIIV IVI LTIIIIVLLLVLLL
97 97 A L H 3< S+ 0 0 140 33 48 LLIRRRRRRRRKKLR RRR RKKKKKKRRRRRRR
98 98 A E H X< S+ 0 0 154 32 66 EEEAAAATTTTKS D KRK EKEEEDEEADTDEK
99 99 A V T 3< S+ 0 0 38 28 84 VVVVVVVLLLLVS M N SETTNGTKLA AT
100 100 A A T 3 S- 0 0 24 22 50 AAAA GG GA D G GGGGENGE E EE
101 101 A E < 0 0 88 16 44 EEE K KEEEEEEE K KK
102 102 A P 0 0 97 4 0 PP P
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 1 0 0 0.000 0 1.00
2 2 A 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0.000 0 1.00
3 3 A 0 0 0 0 0 0 0 0 0 0 71 29 0 0 0 0 0 0 0 0 14 0 0 0.598 19 0.62
4 4 A 0 0 0 0 94 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 17 0 0 0.224 7 0.83
5 5 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 17 0 0 0.000 0 1.00
6 6 A 0 88 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 1 0 0.362 12 0.89
7 7 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50 0 50 16 0 0 0.693 23 0.80
8 8 A 0 6 0 0 0 0 0 0 0 0 0 88 0 0 0 0 6 0 0 0 16 0 0 0.463 15 0.68
9 9 A 0 0 0 0 0 0 94 0 0 0 0 0 0 6 0 0 0 0 0 0 16 0 0 0.234 7 0.88
10 10 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0.000 0 1.00
11 11 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 75 0 0 0 16 0 0 0.562 18 0.68
12 12 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 65 35 0 0 17 0 0 0.649 21 0.72
13 13 A 6 0 0 0 0 0 0 0 0 0 82 0 0 0 0 0 0 6 6 0 17 0 0 0.660 22 0.61
14 14 A 0 0 0 0 0 0 0 18 0 0 0 0 0 0 6 0 0 41 0 35 17 0 0 1.206 40 0.55
15 15 A 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 6 0 17 33 39 18 1 0 1.353 45 0.51
16 16 A 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0.000 0 1.00
17 17 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 15 0 73 0 8 26 0 0 0.840 28 0.67
18 18 A 3 3 93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29 0 0 0.299 9 0.94
19 19 A 7 55 3 0 0 0 3 0 0 0 0 0 0 31 0 0 0 0 0 0 29 0 0 1.108 36 0.39
20 20 A 0 41 10 28 0 0 0 0 17 0 0 0 0 0 0 0 3 0 0 0 29 0 0 1.374 45 0.52
21 21 A 0 0 0 0 0 0 0 0 7 0 28 14 0 0 10 21 7 7 0 7 29 0 0 1.927 64 0.24
22 22 A 0 0 0 0 0 0 0 3 0 0 0 0 0 10 45 7 17 0 14 3 29 0 0 1.587 52 0.39
23 23 A 0 0 10 0 0 0 0 0 31 0 28 14 7 0 3 0 7 0 0 0 29 1 0 1.711 57 0.25
24 24 A 0 0 0 0 0 0 0 45 0 3 33 15 0 0 0 3 0 0 0 0 33 0 0 1.222 40 0.46
25 25 A 3 3 0 0 86 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.546 18 0.92
26 26 A 0 0 0 0 0 0 0 0 3 0 0 0 0 0 17 77 0 0 0 3 35 0 0 0.706 23 0.76
27 27 A 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 6 63 0 29 35 0 0 0.915 30 0.76
28 28 A 0 0 0 0 0 0 0 3 23 0 9 0 66 0 0 0 0 0 0 0 35 0 0 0.925 30 0.56
29 29 A 0 0 0 0 0 0 3 0 46 0 17 0 0 0 23 3 0 9 0 0 35 0 0 1.411 47 0.20
30 30 A 0 0 0 0 0 0 0 0 11 0 0 0 0 0 26 11 0 31 0 20 35 0 0 1.531 51 0.32
31 31 A 3 17 3 9 26 0 40 0 3 0 0 0 0 0 0 0 0 0 0 0 35 0 0 1.533 51 0.56
32 32 A 6 0 94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.219 7 0.97
33 33 A 0 6 0 0 0 0 0 0 0 0 0 0 0 0 20 23 0 51 0 0 35 0 0 1.165 38 0.37
34 34 A 0 0 0 0 11 0 0 0 0 0 14 0 0 0 0 60 3 3 3 6 35 0 0 1.301 43 0.35
35 35 A 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 34 0 3 54 0 35 0 0 1.011 33 0.54
36 36 A 0 0 3 0 6 0 29 0 40 0 23 0 0 0 0 0 0 0 0 0 35 0 0 1.327 44 0.16
37 37 A 0 0 0 0 0 9 0 3 3 23 0 3 0 0 11 34 0 6 0 9 35 0 0 1.842 61 0.21
38 38 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 6 0 60 23 0 35 0 0 1.055 35 0.51
39 39 A 40 0 40 0 0 0 3 0 0 0 3 9 0 0 0 6 0 0 0 0 35 0 0 1.310 43 0.52
40 40 A 37 3 11 0 0 0 29 0 0 0 0 0 0 0 20 0 0 0 0 0 35 0 0 1.397 46 0.12
41 41 A 0 0 0 0 0 0 37 0 0 0 0 0 3 29 0 3 0 23 0 6 35 0 0 1.430 47 0.23
42 42 A 60 6 14 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 1.070 35 0.62
43 43 A 0 0 0 0 0 0 0 0 0 6 9 0 0 0 3 11 6 11 51 3 35 0 0 1.579 52 0.41
44 44 A 0 0 0 0 0 0 0 0 17 83 0 0 0 0 0 0 0 0 0 0 35 0 0 0.458 15 0.81
45 45 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.000 0 1.00
46 46 A 0 0 0 0 9 0 23 0 0 0 0 0 0 0 0 0 0 46 0 23 35 0 0 1.243 41 0.20
47 47 A 0 0 0 0 0 0 0 0 0 0 0 6 0 0 3 54 3 34 0 0 35 0 0 1.065 35 0.48
48 48 A 20 9 71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.773 25 0.83
49 49 A 9 69 3 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.893 29 0.82
50 50 A 0 0 0 0 0 0 0 51 0 3 0 0 0 0 0 14 0 23 3 6 35 0 0 1.324 44 0.40
51 51 A 6 9 3 0 0 0 0 23 29 0 11 3 0 0 0 3 0 0 3 11 35 14 1 1.972 65 0.23
52 52 A 0 0 0 0 0 0 0 0 5 0 0 0 0 0 95 0 0 0 0 0 21 0 0 0.191 6 0.84
53 53 A 33 9 36 0 0 0 15 0 3 0 0 3 0 0 0 0 0 0 0 0 33 0 0 1.450 48 0.46
54 54 A 0 9 51 20 3 0 11 0 0 0 0 0 0 6 0 0 0 0 0 0 35 0 0 1.387 46 0.42
55 55 A 3 20 17 0 0 0 0 60 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 1.032 34 0.23
56 56 A 9 6 74 0 0 0 3 0 0 0 3 0 0 0 0 0 0 3 0 3 35 0 0 1.001 33 0.66
57 57 A 0 0 0 0 0 0 0 46 0 37 0 11 0 0 0 0 0 6 0 0 35 0 0 1.137 37 0.43
58 58 A 17 17 3 0 0 0 6 0 3 49 0 0 0 0 0 6 0 0 0 0 35 1 0 1.486 49 0.17
59 59 A 29 0 29 0 0 0 0 0 0 41 0 0 0 0 0 0 0 0 0 0 34 0 0 1.085 36 0.35
60 60 A 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 34 0 0 0.000 0 1.00
61 61 A 17 3 80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.582 19 0.89
62 62 A 0 0 3 0 0 0 0 46 26 20 3 0 0 0 0 3 0 0 0 0 35 0 0 1.334 44 0.42
63 63 A 37 3 46 11 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 1.177 39 0.68
64 64 A 0 0 0 0 0 0 0 29 17 0 0 0 0 0 0 0 0 9 17 29 35 0 0 1.531 51 0.45
65 65 A 6 3 6 0 0 0 20 0 9 3 11 0 0 0 0 3 0 26 0 14 35 0 0 2.039 68 0.04
66 66 A 0 0 0 0 0 0 0 0 3 0 0 0 0 0 3 26 0 37 9 23 35 1 1 1.468 49 0.46
67 67 A 0 0 0 0 0 0 0 24 0 0 0 6 0 0 12 26 0 12 6 15 34 0 0 1.811 60 0.25
68 68 A 0 0 0 0 0 0 0 26 0 0 15 0 0 0 0 6 0 3 15 35 34 0 0 1.554 51 0.43
69 69 A 0 0 0 0 17 3 6 0 11 0 3 43 0 0 3 6 0 3 6 0 35 0 0 1.810 60 0.11
70 70 A 54 20 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 1.003 33 0.75
71 71 A 9 17 43 26 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 35 0 0 1.428 47 0.57
72 72 A 0 17 37 0 43 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 1.135 37 0.67
73 73 A 0 0 0 0 0 0 0 0 3 83 0 14 0 0 0 0 0 0 0 0 35 0 0 0.535 17 0.75
74 74 A 0 0 3 0 14 0 83 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.535 17 0.93
75 75 A 3 0 0 0 0 0 0 0 0 0 0 97 0 0 0 0 0 0 0 0 35 0 0 0.130 4 0.94
76 76 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 35 0 0 0.000 0 1.00
77 77 A 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 35 0 0 0.000 0 1.00
78 78 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 35 0 0 0.000 0 1.00
79 79 A 0 0 0 9 0 0 60 0 0 0 0 0 0 29 0 0 0 0 3 0 35 0 0 0.977 32 0.43
80 80 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.000 0 1.00
81 81 A 0 0 0 0 0 0 0 0 0 0 29 71 0 0 0 0 0 0 0 0 35 0 0 0.598 19 0.62
82 82 A 0 0 0 0 40 0 0 0 40 0 3 0 0 17 0 0 0 0 0 0 35 0 0 1.137 37 0.10
83 83 A 80 6 0 0 0 0 0 0 6 0 0 9 0 0 0 0 0 0 0 0 35 0 0 0.716 23 0.72
84 84 A 49 37 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 1.068 35 0.70
85 85 A 3 0 0 0 0 0 0 3 0 0 6 3 0 0 29 9 0 46 3 0 35 0 0 1.496 49 0.27
86 86 A 40 31 29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 1.088 36 0.71
87 87 A 0 0 0 0 0 0 0 0 0 69 0 0 0 0 0 9 0 14 0 9 35 1 0 0.958 31 0.48
88 88 A 41 21 6 3 0 0 0 3 0 0 6 0 0 3 0 0 0 3 9 6 34 0 0 1.820 60 0.23
89 89 A 9 0 0 0 0 0 0 0 3 9 11 3 0 0 0 6 0 11 14 34 35 2 11 1.929 64 0.28
90 90 A 0 3 12 27 0 0 0 0 3 30 0 3 0 0 6 6 3 3 0 3 33 0 0 1.947 65 0.16
91 91 A 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 31 3 34 0 17 35 0 0 1.413 47 0.41
92 92 A 0 0 0 0 0 0 0 3 0 0 20 0 0 0 0 0 0 77 0 0 35 0 0 0.624 20 0.64
93 93 A 11 6 51 0 0 0 0 0 3 0 0 0 0 9 9 0 9 3 0 0 35 0 0 1.588 53 0.31
94 94 A 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 6 3 60 17 9 35 0 0 1.248 41 0.57
95 95 A 0 0 0 0 0 0 0 0 0 0 0 0 0 3 41 44 0 0 9 3 34 0 0 1.148 38 0.58
96 96 A 12 21 64 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 33 0 0 0.978 32 0.72
97 97 A 0 12 3 0 0 0 0 0 0 0 0 0 0 0 61 24 0 0 0 0 33 0 0 1.009 33 0.51
98 98 A 0 0 0 0 0 0 0 0 16 0 3 16 0 0 3 16 0 34 0 13 32 0 0 1.714 57 0.33
99 99 A 32 18 0 4 0 0 0 4 7 0 7 14 0 0 0 4 0 4 7 0 28 0 0 1.992 66 0.15
100 100 A 0 0 0 0 0 0 0 41 27 0 0 0 0 0 0 0 0 23 5 5 22 0 0 1.338 44 0.49
101 101 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31 0 69 0 0 16 0 0 0.621 20 0.56
102 102 A 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 4 0 0 0.000 0 1.00
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
16 46 46 1 gLr
20 73 81 2 kEYl
21 72 82 2 eDSi
22 65 81 2 nQYi
23 66 81 2 nQYm
24 66 81 2 nQYm
25 66 81 2 nQYm
26 66 81 2 kQYm
27 66 81 2 nQYm
30 72 82 2 dDSi
31 51 60 1 nTd
32 72 82 2 dDSi
33 73 82 2 eDSt
//