Complet list of 1ygm hssp file
Complete list of 1ygm.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1YGM
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-14
HEADER MEMBRANE PROTEIN 05-JAN-05 1YGM
COMPND MOL_ID: 1; MOLECULE: HYPOTHETICAL PROTEIN BSU31320; CHAIN: A; ENGINEER
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS SUBSP. SUBTILIS STR.
AUTHOR T.P.ROOSILD,J.GREENWALD,M.VEGA,S.CASTRONOVO,R.RIEK,S.CHOE
DBREF 1YGM A 1 110 UNP O05247 O05247_BACSU 1 110
SEQLENGTH 112
NCHAIN 1 chain(s) in 1YGM data set
NALIGN 40
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : D4G0M3_BACNB 1.00 1.00 1 108 3 110 108 0 0 110 D4G0M3 Atypical membrane-integrating protein OS=Bacillus subtilis subsp. natto (strain BEST195) GN=BSNT_04613 PE=4 SV=1
2 : E8VJ83_BACST 1.00 1.00 1 108 3 110 108 0 0 110 E8VJ83 Atypical membrane-integrating protein (Mistic protein) OS=Bacillus subtilis (strain BSn5) GN=BSn5_06540 PE=4 SV=1
3 : G4ERW7_BACIU 1.00 1.00 1 108 3 110 108 0 0 110 G4ERW7 Uncharacterized protein OS=Bacillus subtilis subsp. subtilis str. SC-8 GN=BSSC8_10970 PE=4 SV=1
4 : G4P3Q7_BACIU 1.00 1.00 1 108 3 110 108 0 0 110 G4P3Q7 Mistic OS=Bacillus subtilis subsp. subtilis str. RO-NN-1 GN=I33_3222 PE=4 SV=1
5 : J7JYI5_BACIU 1.00 1.00 1 108 3 110 108 0 0 110 J7JYI5 Atypical membrane-integrating protein (Misticprotein) OS=Bacillus subtilis QB928 GN=mstX PE=4 SV=1
6 : L8AUD2_BACIU 1.00 1.00 22 108 1 87 87 0 0 87 L8AUD2 Atypical membrane-integrating protein OS=Bacillus subtilis BEST7613 GN=mstX PE=4 SV=1
7 : M1UQM0_BACIU 1.00 1.00 1 108 3 110 108 0 0 110 M1UQM0 Atypical membrane-integrating protein MstX OS=Bacillus subtilis subsp. subtilis 6051-HGW GN=mstX PE=4 SV=1
8 : M2UFF4_BACIU 1.00 1.00 1 108 3 110 108 0 0 110 M2UFF4 Protein mistic OS=Bacillus subtilis MB73/2 GN=mstX PE=4 SV=1
9 : MSTX_BACSU 1YGM 1.00 1.00 1 108 3 110 108 0 0 110 Q5BU39 Protein mistic OS=Bacillus subtilis (strain 168) GN=mstX PE=1 SV=1
10 : N0DEV4_BACIU 1.00 1.00 25 108 1 84 84 0 0 84 N0DEV4 Atypical membrane-integrating protein OS=Bacillus subtilis BEST7003 GN=mstX PE=4 SV=1
11 : V5MVB6_BACIU 1.00 1.00 1 108 3 110 108 0 0 110 V5MVB6 Protein mistic OS=Bacillus subtilis PY79 GN=U712_15590 PE=4 SV=1
12 : I0F869_9BACI 0.99 1.00 1 108 3 110 108 0 0 110 I0F869 Atypical membrane-integrating protein OS=Bacillus sp. JS GN=MY9_3142 PE=4 SV=1
13 : L0D0X2_BACIU 0.99 0.99 1 109 3 111 109 0 0 438 L0D0X2 Uncharacterized protein OS=Bacillus subtilis subsp. subtilis str. BSP1 GN=A7A1_2244 PE=4 SV=1
14 : U1Z6Z3_9BACI 0.99 0.99 1 108 3 110 108 0 0 110 U1Z6Z3 Protein mistic OS=Bacillus sp. EGD-AK10 GN=N880_09590 PE=4 SV=1
15 : M4KZT8_BACIU 0.98 0.99 1 108 3 110 108 0 0 110 M4KZT8 Uncharacterized protein OS=Bacillus subtilis XF-1 GN=C663_2990 PE=4 SV=1
16 : M4XDH0_BACIU 0.98 0.99 1 108 3 110 108 0 0 110 M4XDH0 Uncharacterized protein OS=Bacillus subtilis subsp. subtilis str. BAB-1 GN=I653_15060 PE=4 SV=1
17 : G4P018_BACPT 0.97 1.00 1 108 3 110 108 0 0 110 G4P018 Mistic OS=Bacillus subtilis subsp. spizizenii (strain TU-B-10) GN=GYO_3419 PE=4 SV=1
18 : L8PNG7_BACIU 0.96 1.00 1 108 3 110 108 0 0 110 L8PNG7 Uncharacterized protein OS=Bacillus subtilis subsp. inaquosorum KCTC 13429 GN=BSI_43410 PE=4 SV=1
19 : D5MYU0_BACPN 0.95 0.99 1 108 3 110 108 0 0 110 D5MYU0 Atypical membrane-integrating protein (Mistic protein) OS=Bacillus subtilis subsp. spizizenii ATCC 6633 GN=BSU6633_06891 PE=4 SV=1
20 : E0TZ53_BACPZ 0.95 0.99 1 108 3 110 108 0 0 110 E0TZ53 Atypical membrane-integrating protein (Mistic protein) OS=Bacillus subtilis subsp. spizizenii (strain ATCC 23059 / NRRL B-14472 / W23) GN=mstX PE=4 SV=1
21 : Q19WT8_BACMO 0.93 0.99 25 108 1 84 84 0 0 84 Q19WT8 Mistic protein OS=Bacillus mojavensis PE=4 SV=1
22 : E1UP44_BACAS 0.80 0.89 25 108 1 84 84 0 0 84 E1UP44 Atypical membrane-integrating protein (Mistic protein) OS=Bacillus amyloliquefaciens (strain ATCC 23350 / DSM 7 / BCRC 11601 / NBRC 15535 / NRRL B-14393) GN=mstX PE=4 SV=1
23 : F4E8W1_BACAM 0.80 0.89 25 108 1 84 84 0 0 84 F4E8W1 Atypical membrane-integrating protein (Mistic protein) OS=Bacillus amyloliquefaciens TA208 GN=mstX PE=4 SV=1
24 : F4EKX2_BACAM 0.80 0.89 25 108 1 84 84 0 0 84 F4EKX2 Atypical membrane-integrating protein (Mistic protein) OS=Bacillus amyloliquefaciens LL3 GN=mstX PE=4 SV=1
25 : G0IJV9_BACAM 0.80 0.89 25 108 1 84 84 0 0 84 G0IJV9 Uncharacterized protein OS=Bacillus amyloliquefaciens XH7 GN=BAXH7_03179 PE=4 SV=1
26 : H2ACE9_BACAM 0.77 0.90 25 108 1 84 84 0 0 84 H2ACE9 Uncharacterized protein OS=Bacillus amyloliquefaciens subsp. plantarum CAU B946 GN=mstX PE=4 SV=1
27 : H8XG97_BACAM 0.77 0.90 25 108 1 84 84 0 0 84 H8XG97 Uncharacterized protein OS=Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2 GN=mstX PE=4 SV=1
28 : J0LVW0_9BACI 0.77 0.90 25 108 1 84 84 0 0 84 J0LVW0 Atypical membrane-integrating protein OS=Bacillus sp. 916 GN=BB65665_08782 PE=4 SV=1
29 : K2H5S2_BACAM 0.77 0.90 25 108 1 84 84 0 0 84 K2H5S2 Uncharacterized protein OS=Bacillus amyloliquefaciens subsp. plantarum M27 GN=WYY_05357 PE=4 SV=1
30 : S6FZ39_BACAM 0.77 0.90 25 108 1 84 84 0 0 84 S6FZ39 Atypical membrane-integrating protein OS=Bacillus amyloliquefaciens subsp. plantarum UCMB5033 GN=RBAU_2966 PE=4 SV=1
31 : U4PPG9_BACAM 0.77 0.90 25 108 1 84 84 0 0 84 U4PPG9 Uncharacterized protein OS=Bacillus amyloliquefaciens subsp. plantarum NAU-B3 GN=BAPNAU_3016 PE=4 SV=1
32 : V9RKK2_BACAM 0.77 0.90 25 108 1 84 84 0 0 84 V9RKK2 Protein mistic OS=Bacillus amyloliquefaciens LFB112 GN=U722_15310 PE=4 SV=1
33 : I2C9G7_BACAM 0.76 0.89 22 108 1 87 87 0 0 87 I2C9G7 Uncharacterized protein OS=Bacillus amyloliquefaciens Y2 GN=MUS_3417 PE=4 SV=1
34 : M1KNT3_BACAM 0.76 0.90 25 108 1 84 84 0 0 84 M1KNT3 Uncharacterized protein OS=Bacillus amyloliquefaciens IT-45 GN=KSO_004970 PE=4 SV=1
35 : M1X7L1_BACAM 0.76 0.90 25 108 1 84 84 0 0 84 M1X7L1 Atypical membrane-integrating protein OS=Bacillus amyloliquefaciens subsp. plantarum UCMB5036 GN=BAM5036_2752 PE=4 SV=1
36 : U1U3E6_BACAM 0.76 0.90 25 108 1 84 84 0 0 84 U1U3E6 Protein mistic OS=Bacillus amyloliquefaciens EGD-AQ14 GN=O205_16610 PE=4 SV=1
37 : U2S9K1_BACAM 0.76 0.90 25 108 1 84 84 0 0 84 U2S9K1 Protein mistic OS=Bacillus amyloliquefaciens UASWS BA1 GN=N786_05085 PE=4 SV=1
38 : U5XBR6_BACAM 0.76 0.90 25 108 1 84 84 0 0 84 U5XBR6 Atypical membrane-integrating protein OS=Bacillus amyloliquefaciens CC178 GN=U471_29380 PE=4 SV=1
39 : L0BRI0_BACAM 0.74 0.90 25 108 1 84 84 0 0 84 L0BRI0 Uncharacterized protein OS=Bacillus amyloliquefaciens subsp. plantarum AS43.3 GN=B938_14515 PE=4 SV=1
40 : I2HUN1_9BACI 0.71 0.85 17 108 13 104 92 0 0 104 I2HUN1 Atypical membrane-integrating protein OS=Bacillus sp. 5B6 GN=MY7_2803 PE=4 SV=1
## ALIGNMENTS 1 - 40
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 3 A C 0 0 29 19 0 CCCCC CCC CCCCCCCCCC
2 4 A T + 0 0 129 19 60 TTTTT TTT TSTTTTSSSS
3 5 A F S S- 0 0 182 19 0 FFFFF FFF FFFFFFFFFF
4 6 A F S S+ 0 0 174 19 0 FFFFF FFF FFFFFFFFFF
5 7 A E - 0 0 49 19 0 EEEEE EEE EEEEEEEEEE
6 8 A K S S- 0 0 156 19 0 KKKKK KKK KKKKKKKKKK
7 9 A H S >> S+ 0 0 71 19 0 HHHHH HHH HHHHHHHHHH
8 10 A H T 34 S+ 0 0 37 19 0 HHHHH HHH HHHHHHHHHH
9 11 A R T 34 S+ 0 0 80 19 0 RRRRR RRR RRRRRRRRRR
10 12 A K T <> S+ 0 0 74 19 0 KKKKK KKK KKKKKKKKKK
11 13 A W H X S+ 0 0 11 19 0 WWWWW WWW WWWWWWWWWW
12 14 A D H > S+ 0 0 25 19 0 DDDDD DDD DDDDDDDDDD
13 15 A I H > S+ 0 0 30 19 0 IIIII III IIIIIIIIII
14 16 A L H X S+ 0 0 12 19 0 LLLLL LLL LLLLLLLLLL
15 17 A L H X S+ 0 0 11 19 9 LLLLL LLL LLLLLLLLFF
16 18 A E H < S+ 0 0 76 19 36 EEEEE EEE EEEEEEEEKK
17 19 A K H < S+ 0 0 99 20 0 KKKKK KKK KKKKKKKKKK K
18 20 A S H < S- 0 0 3 20 53 SSSSS SSS SSSSSSSSSS K
19 21 A T S < S+ 0 0 16 20 53 TTTTT TTT TTTTTTTTTT D
20 22 A G S S+ 0 0 40 20 45 GGGGG GGG GGGGGGGGGG T
21 23 A V S S- 0 0 44 20 53 VVVVV VVV VVVVVVVVVV G
22 24 A M S S+ 0 0 104 22 24 MMMMMMMMM MMMMMMMMMM M V
23 25 A E S > S+ 0 0 118 22 84 EEEEEEEEE EEEEEEEEEE I I
24 26 A A T 4 S- 0 0 59 22 59 AAAAAAAAA AAAAAAAAAA D D
25 27 A M T 4 S+ 0 0 40 41 0 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMM
26 28 A K T 4 S+ 0 0 30 41 0 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
27 29 A V < + 0 0 93 41 0 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
28 30 A T S S- 0 0 71 41 0 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
29 31 A S - 0 0 75 41 71 SSSSSSSSSSSSSSSSSSSSSNNNNNNNNNNNNNNNNNNN
30 32 A E S > S+ 0 0 54 41 59 EEEEEEEEEEEEEEEEEEEEEGGGGGGGGGGGGGGGGGGG
31 33 A E H > S+ 0 0 125 41 0 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
32 34 A K H > S+ 0 0 131 41 4 KKKKKKKKKKKKKKRRKKKKKKKKKKKKKKKKKKKKKKKK
33 35 A E H 4 S+ 0 0 0 41 0 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
34 36 A Q H X S+ 0 0 7 41 0 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
35 37 A L H X S+ 0 0 85 41 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
36 38 A S H X S+ 0 0 20 41 0 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
37 39 A T H >>S+ 0 0 1 41 77 TTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNN
38 40 A A H <5S+ 0 0 8 41 0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
39 41 A I H X5S+ 0 0 89 41 0 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
40 42 A D H <5S- 0 0 84 41 0 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
41 43 A R T X>S+ 0 0 105 41 0 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
42 44 A M I 4XS+ 0 0 7 41 0 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMM
43 45 A N I X5S- 0 0 91 41 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
44 46 A E I >5S+ 0 0 131 41 0 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
45 47 A G I X5S+ 0 0 21 41 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
46 48 A L I >X S+ 0 0 27 41 27 AAAAAAAAAAAAAAAAAAAAVVVVVAAAAAAAATAATAAA
49 51 A F H >X S+ 0 0 1 41 0 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
50 52 A I H 3< S+ 0 0 9 41 0 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
51 53 A Q H << S+ 0 0 142 41 0 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
52 54 A L H << S+ 0 0 89 41 1 LLLLLLLLLLLLLLLLLLLLFLLLLLLLLLLLLLLLLLLL
53 55 A Y < - 0 0 25 41 0 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
54 56 A N + 0 0 50 41 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
55 57 A E S S- 0 0 65 41 0 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
56 58 A S S S- 0 0 5 41 20 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSAASAAA
57 59 A E S S+ 0 0 1 41 0 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
58 60 A I + 0 0 66 41 107 IIIIIIIIIIIIIIIIIIIIINNNNNNNNNNNNNNNNNNN
59 61 A D S S+ 0 0 113 41 0 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
60 62 A E S S- 0 0 28 41 0 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
61 63 A P + 0 0 113 41 0 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
62 64 A L S S- 0 0 113 41 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
63 65 A I S S- 0 0 101 41 0 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
64 66 A Q - 0 0 126 41 0 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
65 67 A L S >>S+ 0 0 13 41 17 LLLLLLLLLLLLLLLLLLLLLFFFFFFFFFFFFFFFFFFF
66 68 A D I >>>S+ 0 0 78 41 28 DDDDDDDDDDDDDDDDDEDDEEEEEEEEEEEEEEEEEEEE
67 69 A D I 345S+ 0 0 80 41 0 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
68 70 A D I 345S- 0 0 20 41 29 DDDDDDDDDDDDDDDDDDDDDEEEEEEEEEEEEEEEEEEE
69 71 A T I XX5S+ 0 0 5 41 0 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
70 72 A A I 3X S+ 0 0 41 41 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
73 75 A M H X S+ 0 0 11 41 53 MMMMMMMMMMMMMMMMMMMMMIIIIIIIIIIIIIIIIIII
74 76 A K H X S+ 0 0 106 41 41 KKKKKKKKKKKKKKKKKKKKKRRRRRRRRRRRRRRRRRRR
75 77 A Q H X S+ 0 0 97 41 40 QQQQQQQQQQQQQQQQQQQQQQQQQHHHHHHHHHHHHHHH
76 78 A A H X>S+ 0 0 14 41 0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
77 79 A R H <5S+ 0 0 133 41 0 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
78 80 A D H <5S+ 0 0 114 41 3 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDND
79 81 A M H <5S- 0 0 128 41 103 MMMMMMMMMMMMKKKKMMMMLSSSSSSSSSSSSSSSSSSS
80 82 A Y T <5S- 0 0 129 41 0 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
81 83 A G S > + 0 0 22 41 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
86 88 A N H 3> + 0 0 55 41 35 NNNNNNNNNNNNNNNNNNNNNNNNNDDNDNDDDDDDDDDD
87 89 A E H 34 S+ 0 0 171 41 0 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
88 90 A K H X> S+ 0 0 114 41 0 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
89 91 A L H 3X>S+ 0 0 0 41 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
90 92 A N H 3X5S+ 0 0 106 41 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
91 93 A T H <>5S+ 0 0 80 41 0 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
92 94 A I H X5S+ 0 0 32 41 0 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
93 95 A I H X5S+ 0 0 20 41 0 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
94 96 A K H XS+ 0 0 31 41 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
98 100 A S H <5S+ 0 0 35 41 0 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
99 101 A I T <5S- 0 0 61 41 0 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
100 102 A S T 5S+ 0 0 42 41 0 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
101 103 A V T 5 + 0 0 1 41 34 VVVVVVVVVVVVVVVVLLLLLLLLLLLLLLLLLLLLLLLL
102 104 A S S > S- 0 0 32 41 59 GGGGGGGGGGGGGGGGGGGGGEEEEEEEEEEEEEEEEEEE
106 108 A E T 34 S- 0 0 139 41 83 EEEEEEEEEEEEEEEEEEEEEPPPPPPPPPPPPPPPPPAP
107 109 A K T 34 S- 0 0 101 41 76 KKKKKKKKKKKKKKKKKKKKKDDDDDDGDGDDDDDDDGDD
108 110 A E T <4 S- 0 0 105 41 0 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
109 111 A L S < S+ 0 0 152 2 0 L
110 112 A V - 0 0 99 1 0
111 113 A P 0 0 87 1 0
112 114 A R 0 0 255 1 0
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 3 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 19 0 0 0.000 0 1.00
2 4 A 0 0 0 0 0 0 0 0 0 0 26 74 0 0 0 0 0 0 0 0 19 0 0 0.576 19 0.39
3 5 A 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0.000 0 1.00
4 6 A 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0.000 0 1.00
5 7 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 19 0 0 0.000 0 1.00
6 8 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 19 0 0 0.000 0 1.00
7 9 A 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 19 0 0 0.000 0 1.00
8 10 A 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 19 0 0 0.000 0 1.00
9 11 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 19 0 0 0.000 0 1.00
10 12 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 19 0 0 0.000 0 1.00
11 13 A 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0.000 0 1.00
12 14 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 19 0 0 0.000 0 1.00
13 15 A 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0.000 0 1.00
14 16 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0.000 0 1.00
15 17 A 0 89 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0.336 11 0.91
16 18 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 89 0 0 19 0 0 0.336 11 0.63
17 19 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 20 0 0 0.000 0 1.00
18 20 A 0 0 0 0 0 0 0 0 0 0 95 0 0 0 0 5 0 0 0 0 20 0 0 0.199 6 0.47
19 21 A 0 0 0 0 0 0 0 0 0 0 0 95 0 0 0 0 0 0 0 5 20 0 0 0.199 6 0.47
20 22 A 0 0 0 0 0 0 0 95 0 0 0 5 0 0 0 0 0 0 0 0 20 0 0 0.199 6 0.55
21 23 A 95 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0.199 6 0.47
22 24 A 5 0 0 95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0.185 6 0.75
23 25 A 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 91 0 0 22 0 0 0.305 10 0.16
24 26 A 0 0 0 0 0 0 0 0 91 0 0 0 0 0 0 0 0 0 0 9 22 0 0 0.305 10 0.40
25 27 A 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
26 28 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 41 0 0 0.000 0 1.00
27 29 A 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
28 30 A 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
29 31 A 0 0 0 0 0 0 0 0 0 0 54 0 0 0 0 0 0 0 46 0 41 0 0 0.690 23 0.28
30 32 A 0 0 0 0 0 0 0 46 0 0 0 0 0 0 0 0 0 54 0 0 41 0 0 0.690 23 0.40
31 33 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 41 0 0 0.000 0 1.00
32 34 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 95 0 0 0 0 41 0 0 0.195 6 0.95
33 35 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 41 0 0 0.000 0 1.00
34 36 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 41 0 0 0.000 0 1.00
35 37 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
36 38 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
37 39 A 0 0 0 0 0 0 0 0 0 0 0 54 0 0 0 0 0 0 46 0 41 0 0 0.690 23 0.22
38 40 A 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
39 41 A 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
40 42 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 41 0 0 0.000 0 1.00
41 43 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 41 0 0 0.000 0 1.00
42 44 A 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
43 45 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 41 0 0 0.000 0 1.00
44 46 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 41 0 0 0.000 0 1.00
45 47 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
46 48 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
47 49 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 41 0 0 0.000 0 1.00
48 50 A 12 0 0 0 0 0 0 0 83 0 0 5 0 0 0 0 0 0 0 0 41 0 0 0.559 18 0.72
49 51 A 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
50 52 A 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
51 53 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 41 0 0 0.000 0 1.00
52 54 A 0 98 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.115 3 0.99
53 55 A 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
54 56 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 41 0 0 0.000 0 1.00
55 57 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 41 0 0 0.000 0 1.00
56 58 A 0 0 0 0 0 0 0 0 12 0 88 0 0 0 0 0 0 0 0 0 41 0 0 0.371 12 0.79
57 59 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 41 0 0 0.000 0 1.00
58 60 A 0 0 54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46 0 41 0 0 0.690 23 -0.07
59 61 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 41 0 0 0.000 0 1.00
60 62 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 41 0 0 0.000 0 1.00
61 63 A 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
62 64 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
63 65 A 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
64 66 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 41 0 0 0.000 0 1.00
65 67 A 0 54 0 0 46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.690 23 0.82
66 68 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51 0 49 41 0 0 0.693 23 0.72
67 69 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 41 0 0 0.000 0 1.00
68 70 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46 0 54 41 0 0 0.690 23 0.70
69 71 A 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
70 72 A 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
71 73 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51 0 49 41 0 0 0.693 23 0.77
72 74 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
73 75 A 0 0 46 54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.690 23 0.46
74 76 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46 54 0 0 0 0 41 0 0 0.690 23 0.58
75 77 A 0 0 0 0 0 0 0 0 0 0 0 0 0 37 0 0 63 0 0 0 41 0 0 0.657 21 0.60
76 78 A 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
77 79 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 41 0 0 0.000 0 1.00
78 80 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 98 41 0 0 0.115 3 0.97
79 81 A 0 2 0 41 0 0 0 0 0 0 46 0 0 0 0 10 0 0 0 0 41 0 0 1.039 34 -0.04
80 82 A 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
81 83 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
82 84 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 41 0 0 0.000 0 1.00
83 85 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 95 0 0 41 0 0 0.195 6 0.94
84 86 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54 46 0 0 0 41 0 0 0.690 23 0.34
85 87 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
86 88 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 68 32 41 0 0 0.625 20 0.64
87 89 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 41 0 0 0.000 0 1.00
88 90 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 41 0 0 0.000 0 1.00
89 91 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
90 92 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 41 0 0 0.000 0 1.00
91 93 A 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
92 94 A 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
93 95 A 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
94 96 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 41 0 0 0.000 0 1.00
95 97 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 41 0 0 0.000 0 1.00
96 98 A 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
97 99 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
98 100 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
99 101 A 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
100 102 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
101 103 A 41 59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.679 22 0.65
102 104 A 0 0 0 0 0 0 0 0 0 0 98 2 0 0 0 0 0 0 0 0 41 0 0 0.115 3 0.95
103 105 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46 0 54 0 0 41 0 0 0.690 23 0.28
104 106 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 41 0 0 0.000 0 1.00
105 107 A 0 0 0 0 0 0 0 54 0 0 0 0 0 0 0 0 0 46 0 0 41 0 0 0.690 23 0.40
106 108 A 0 0 0 0 0 0 0 0 2 44 0 0 0 0 0 0 0 54 0 0 41 0 0 0.786 26 0.16
107 109 A 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 54 0 0 0 39 41 0 0 0.893 29 0.24
108 110 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 41 0 0 0.000 0 1.00
109 111 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0.000 0 1.00
110 112 A 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
111 113 A 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
112 114 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 1 0 0 0.000 0 1.00
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
//