Complet list of 1xx8 hssp file
Complete list of 1xx8.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1XX8
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-13
HEADER DNA BINDING PROTEIN 04-NOV-04 1XX8
COMPND MOL_ID: 1; MOLECULE: SAC7D; CHAIN: A; ENGINEERED: YES; MUTATION: YES
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: SULFOLOBUS ACIDOCALDARIUS; ORGANISM_TA
AUTHOR J.L.BEDELL,S.P.EDMONDSON,J.W.SHRIVER
DBREF 1XX8 A 1 66 UNP P13123 DN71_SULAC 0 65
SEQLENGTH 66
NCHAIN 1 chain(s) in 1XX8 data set
NALIGN 42
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : DN71_SULAC 1WD1 0.98 0.98 1 66 1 66 66 0 0 66 P13123 DNA-binding protein 7d OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) GN=Saci_0064 PE=1 SV=3
2 : M1IS33_9CREN 0.98 0.98 1 66 1 66 66 0 0 66 M1IS33 DNA-binding protein 7e OS=Sulfolobus acidocaldarius N8 GN=SacN8_00300 PE=4 SV=1
3 : M1IZ43_9CREN 0.98 0.98 1 66 1 66 66 0 0 66 M1IZ43 DNA-binding protein 7e OS=Sulfolobus acidocaldarius Ron12/I GN=SacRon12I_00300 PE=4 SV=1
4 : V9S4U6_9CREN 0.98 0.98 1 66 1 66 66 0 0 66 V9S4U6 DNA-binding protein OS=Sulfolobus acidocaldarius SUSAZ GN=SUSAZ_00300 PE=4 SV=1
5 : DN72_SULAC 0.91 0.95 1 65 1 65 65 0 0 65 P13125 DNA-binding protein 7e OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) GN=Saci_0362 PE=1 SV=2
6 : M1ISX7_9CREN 0.91 0.95 1 65 1 65 65 0 0 65 M1ISX7 DNA-bindign protein 7e OS=Sulfolobus acidocaldarius N8 GN=SacN8_01775 PE=4 SV=1
7 : M1IZZ5_9CREN 0.91 0.95 1 65 1 65 65 0 0 65 M1IZZ5 DNA-bindign protein 7e OS=Sulfolobus acidocaldarius Ron12/I GN=SacRon12I_01775 PE=4 SV=1
8 : V9S432_9CREN 0.91 0.95 1 65 1 65 65 0 0 65 V9S432 DNA-binding protein OS=Sulfolobus acidocaldarius SUSAZ GN=SUSAZ_01845 PE=4 SV=1
9 : F4B8X5_ACIHW 0.89 0.93 2 58 3 59 57 0 0 60 F4B8X5 DNA-binding 7 kDa protein OS=Acidianus hospitalis (strain W1) GN=Ahos_0959 PE=4 SV=1
10 : F4B9I5_ACIHW 0.88 0.92 2 60 3 61 59 0 0 62 F4B9I5 DNA-binding 7 kDa protein OS=Acidianus hospitalis (strain W1) GN=Ahos_2260 PE=4 SV=1
11 : F4B991_ACIHW 0.85 0.90 1 60 1 60 60 0 0 61 F4B991 DNA-binding 7 kDa protein OS=Acidianus hospitalis (strain W1) GN=Ahos_0998 PE=4 SV=1
12 : W7KXD2_9CREN 0.85 0.92 2 60 3 61 59 0 0 61 W7KXD2 DNA-binding 7 kDa protein OS=Sulfolobales archaeon AZ1 GN=ASUL_02969 PE=4 SV=1
13 : DN71_SULTO 0.83 0.91 1 64 1 64 64 0 0 64 Q96X56 DNA-binding protein 7 OS=Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) GN=STK_06395 PE=3 SV=3
14 : C3MNA8_SULIL 0.81 0.89 1 63 1 64 64 1 1 64 C3MNA8 DNA-binding 7 kDa protein OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=LS215_2918 PE=4 SV=1
15 : C3MTG6_SULIM 0.81 0.89 1 63 1 64 64 1 1 64 C3MTG6 DNA-binding 7 kDa protein OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=M1425_2753 PE=4 SV=1
16 : C3N3R8_SULIA 0.81 0.89 1 63 1 64 64 1 1 64 C3N3R8 DNA-binding 7 kDa protein OS=Sulfolobus islandicus (strain M.16.27) GN=M1627_2806 PE=4 SV=1
17 : C3NCP5_SULIY 0.81 0.89 1 63 1 64 64 1 1 64 C3NCP5 DNA-binding 7 kDa protein OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=YG5714_2932 PE=4 SV=1
18 : C3NG43_SULIN 0.81 0.89 1 63 1 64 64 1 1 64 C3NG43 DNA-binding 7 kDa protein OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=YN1551_3121 PE=4 SV=1
19 : C4KFJ4_SULIK 0.81 0.89 1 63 1 64 64 1 1 64 C4KFJ4 DNA-binding 7 kDa protein OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=M164_2736 PE=4 SV=1
20 : DN72_SULSH 0.81 0.89 1 63 1 64 64 1 1 64 O59632 DNA-binding protein 7b OS=Sulfolobus shibatae GN=ssh7b PE=1 SV=3
21 : F0NG01_SULIR 0.81 0.89 1 63 1 64 64 1 1 64 F0NG01 DNA-binding 7 kDa protein OS=Sulfolobus islandicus (strain REY15A) GN=SiRe_2648 PE=4 SV=1
22 : F0NQV6_SULIH 0.81 0.89 1 63 1 64 64 1 1 64 F0NQV6 DNA-binding 7 kDa protein OS=Sulfolobus islandicus (strain HVE10/4) GN=SiH_2711 PE=4 SV=1
23 : D2PIL5_SULID 0.80 0.89 1 63 1 64 64 1 1 64 D2PIL5 DNA-binding 7 kDa protein OS=Sulfolobus islandicus (strain L.D.8.5 / Lassen #2) GN=LD85_3079 PE=4 SV=1
24 : M9UII2_SULIS 0.80 0.89 1 63 1 64 64 1 1 64 M9UII2 DNA-binding 7 kDa protein OS=Sulfolobus islandicus LAL14/1 GN=SiL_2597 PE=4 SV=1
25 : D0KNM8_SULS9 0.78 0.86 1 63 1 64 64 1 1 64 D0KNM8 DNA-binding 7 kDa protein OS=Sulfolobus solfataricus (strain 98/2) GN=Ssol_0360 PE=4 SV=1
26 : DN72_SULSO 1C8C 0.78 0.86 1 63 1 64 64 1 1 64 P39476 DNA-binding protein 7d OS=Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=sso7d PE=1 SV=2
27 : F0NEI9_SULIR 0.78 0.88 1 63 1 64 64 1 1 64 F0NEI9 DNA-binding 7 kDa protein OS=Sulfolobus islandicus (strain REY15A) GN=SiRe_0668 PE=4 SV=1
28 : F0NJT3_SULIH 0.78 0.88 1 63 1 64 64 1 1 64 F0NJT3 DNA-binding 7 kDa protein OS=Sulfolobus islandicus (strain HVE10/4) GN=SiH_0663 PE=4 SV=1
29 : M9UD85_SULIS 0.78 0.88 1 63 1 64 64 1 1 64 M9UD85 Uncharacterized protein OS=Sulfolobus islandicus LAL14/1 GN=SiL_0707 PE=4 SV=1
30 : A4YEA2_METS5 0.77 0.92 2 61 3 62 60 0 0 62 A4YEA2 Nucleoid protein Sul7d OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=Msed_0579 PE=4 SV=1
31 : C3MNJ3_SULIL 0.77 0.86 1 63 1 64 64 1 1 64 C3MNJ3 DNA-binding 7 kDa protein OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=LS215_0909 PE=4 SV=1
32 : C3MVV3_SULIM 0.77 0.86 1 63 1 64 64 1 1 64 C3MVV3 DNA-binding 7 kDa protein OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=M1425_0719 PE=4 SV=1
33 : C3N3H2_SULIA 0.77 0.86 1 63 1 64 64 1 1 64 C3N3H2 DNA-binding 7 kDa protein OS=Sulfolobus islandicus (strain M.16.27) GN=M1627_0722 PE=4 SV=1
34 : C3ND22_SULIY 0.77 0.86 1 63 1 64 64 1 1 64 C3ND22 DNA-binding 7 kDa protein OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=YG5714_0978 PE=4 SV=1
35 : C3NIJ5_SULIN 0.77 0.86 1 63 1 64 64 1 1 64 C3NIJ5 DNA-binding 7 kDa protein OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=YN1551_1897 PE=4 SV=1
36 : C4KFE9_SULIK 0.77 0.86 1 63 1 64 64 1 1 64 C4KFE9 DNA-binding 7 kDa protein OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=M164_0747 PE=4 SV=1
37 : D0KPA3_SULS9 0.77 0.86 1 63 1 64 64 1 1 64 D0KPA3 DNA-binding 7 kDa protein OS=Sulfolobus solfataricus (strain 98/2) GN=Ssol_2697 PE=4 SV=1
38 : D2PHL8_SULID 0.77 0.86 1 63 1 64 64 1 1 64 D2PHL8 DNA-binding 7 kDa protein OS=Sulfolobus islandicus (strain L.D.8.5 / Lassen #2) GN=LD85_0770 PE=4 SV=1
39 : DN71_SULSH 0.77 0.86 1 63 1 64 64 1 1 64 P61990 DNA-binding protein 7a OS=Sulfolobus shibatae GN=ssh7a PE=1 SV=2
40 : DN71_SULSO 2CVR 0.77 0.86 1 63 1 64 64 1 1 64 P61991 DNA-binding protein 7a OS=Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=sso7a1 PE=1 SV=2
41 : F4FYY6_METCR 0.77 0.90 2 61 3 62 60 0 0 62 F4FYY6 Uncharacterized protein OS=Metallosphaera cuprina (strain Ar-4) GN=Mcup_1453 PE=4 SV=1
42 : H2C2U0_9CREN 0.77 0.92 2 61 3 62 60 0 0 62 H2C2U0 7kD DNA-binding domain protein OS=Metallosphaera yellowstonensis MK1 GN=MetMK1DRAFT_00010640 PE=4 SV=1
## ALIGNMENTS 1 - 42
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A M 0 0 220 37 0 MMMMMMMM M MMMMMMMMMMMMMMMMM MMMMMMMMMM
2 2 A V + 0 0 54 43 60 VVVVAAAATTTTVVVVVVVVVVVVAATTTTTAAAATATAATT
3 3 A K - 0 0 76 43 64 KKKKKKKKKKTKTTTTTTTTTTTTTTTTTKTTTTTTTTTTKK
4 4 A V B +A 15 0A 2 43 7 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVIVVVVVVVVVVII
5 5 A K + 0 0 105 43 12 KKKKRRRRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
6 6 A F - 0 0 0 43 0 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
7 7 A K B -BC 12 44B 111 43 0 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
8 8 A Y S S- 0 0 64 43 0 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
9 9 A K S S- 0 0 158 43 0 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
10 10 A G S S+ 0 0 78 43 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
11 11 A E S S- 0 0 125 43 14 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEQEEEEEEEEEEQQ
12 12 A E B +B 7 0B 140 43 10 EEEEEEEEEEEEEEEEEEEEEEEDEEEEEDEEEEEEEEEEDD
13 13 A K - 0 0 80 43 33 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKLKKKKKKKKKKLL
14 14 A E - 0 0 130 43 25 EEEEEEEEEEEEEEEEEEEEEEQEEEQQQEQQQQQQQQQQEE
15 15 A V B -A 4 0A 15 43 0 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
16 16 A D > - 0 0 94 43 0 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
17 17 A T G > S+ 0 0 29 43 49 TTTTTTTTIIIIITTTTTTTTTTTIITTTIIIIIIIIIIIII
18 18 A S G 3 S+ 0 0 107 43 0 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
19 19 A K G < S+ 0 0 95 43 0 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
20 20 A I E < +D 34 0B 39 43 7 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIVIIIIIIIIIIVV
21 21 A K E + 0 0B 119 43 0 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
22 22 A K E -D 33 0B 140 43 0 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
23 23 A V E +D 32 0B 32 43 0 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
24 24 A A - 0 0 53 43 10 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
25 25 A R + 0 0 86 43 12 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRKRRRRRRRRRRKK
26 26 A V - 0 0 94 43 0 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
27 27 A G S S- 0 0 55 43 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
28 28 A K S S+ 0 0 163 43 0 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
29 29 A M E S- E 0 46B 88 43 0 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMM
30 30 A V E - E 0 45B 1 43 18 VVVVVVVVIIIIIIIIIIIIIIIIIIIIIVIIIIIIIIIIVV
31 31 A S E + E 0 44B 14 43 0 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
32 32 A F E -DE 23 43B 0 43 0 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
33 33 A T E -DE 22 42B 22 43 0 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
34 34 A Y E -DE 20 41B 1 43 0 YYYYYYYFYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
35 35 A D E + E 0 40B 48 43 0 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
36 36 A D - 0 0 54 43 25 DDDDDDDDDDDDDEEEEEEEEEEEEEEEEDEEEEEEEEEEDD
37 37 A N S S+ 0 0 108 43 55 NNNNNNNNNNNNNggggggggggggggggNggggggggggNN
38 38 A G S S- 0 0 62 43 0 GGGGGGGGGGGGGggggggggggggggggGggggggggggGG
39 39 A K S S- 0 0 120 43 0 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
40 40 A T E - E 0 35B 108 43 0 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
41 41 A G E - E 0 34B 0 43 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
42 42 A R E - E 0 33B 142 43 0 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
43 43 A G E - E 0 32B 0 43 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
44 44 A A E +CE 7 31B 41 43 0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
45 45 A V E - E 0 30B 2 43 0 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
46 46 A S E - E 0 29B 50 43 0 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
47 47 A E S > S+ 0 0 73 43 0 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
48 48 A K T 3 S+ 0 0 189 43 0 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
49 49 A D T 3 S+ 0 0 97 43 0 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
50 50 A A < - 0 0 9 43 0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
51 51 A P >> - 0 0 24 43 0 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
52 52 A K H 3> S+ 0 0 129 43 0 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
53 53 A E H 3> S+ 0 0 59 43 0 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
54 54 A L H <4 S+ 0 0 3 43 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
55 55 A L H X S+ 0 0 81 43 2 LLLLMMMLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
56 56 A D H X S+ 0 0 65 43 52 DDDDDDDDEDEEQQQQQQQQQQQQQQQQQNQQQQQQQQQQSN
57 57 A M H < S+ 0 0 53 43 16 MMMMMMMMKKKKMMMMMMMMMMMMMMMMMMMMMMMMMMMMMM
58 58 A L H >> S+ 0 0 5 43 15 LLLLLLLLLLLILLLLLLLLLLLLLLLLLILLLLLLLLLLII
59 59 A A H 3< S+ 0 0 28 42 61 AAAAAAAA EEKEEEEEEEEEEEEEEEEEGEEEEEEEEEEGG
60 60 A R T 3< S+ 0 0 154 42 25 RRRRRRRR KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
61 61 A A T <4>S+ 0 0 42 39 74 AAAAAAAA SQQQQQQQQQQQQQQQQKQQQQQQQQQQKK
62 62 A E T <5S+ 0 0 63 36 66 EEEEEEEE GKKKKKKKKKKKKKKKK KKKKKKKKKK
63 63 A R T 5S+ 0 0 208 36 20 RRRRKKKK KKKKKKKKKKKKKKKKK KKKKKKKKKK
64 64 A E T 5S+ 0 0 176 10 59 EEEEKKKK K
65 65 A K T 5 0 0 178 9 0 KKKKKKKK
66 66 A K < 0 0 192 5 0 KKKK
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37 0 0 0.000 0 1.00
2 2 A 40 0 0 0 0 0 0 0 30 0 0 30 0 0 0 0 0 0 0 0 43 0 0 1.090 36 0.39
3 3 A 0 0 0 0 0 0 0 0 0 0 0 65 0 0 0 35 0 0 0 0 43 0 0 0.647 21 0.35
4 4 A 93 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.253 8 0.93
5 5 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 91 0 0 0 0 43 0 0 0.309 10 0.88
6 6 A 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.000 0 1.00
7 7 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 43 0 0 0.000 0 1.00
8 8 A 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.000 0 1.00
9 9 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 43 0 0 0.000 0 1.00
10 10 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.000 0 1.00
11 11 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 93 0 0 43 0 0 0.253 8 0.85
12 12 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 91 0 9 43 0 0 0.309 10 0.90
13 13 A 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 93 0 0 0 0 43 0 0 0.253 8 0.67
14 14 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33 67 0 0 43 0 0 0.631 21 0.74
15 15 A 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.000 0 1.00
16 16 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 43 0 0 0.000 0 1.00
17 17 A 0 0 47 0 0 0 0 0 0 0 0 53 0 0 0 0 0 0 0 0 43 0 0 0.691 23 0.51
18 18 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 43 0 0 0.000 0 1.00
19 19 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 43 0 0 0.000 0 1.00
20 20 A 7 0 93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.253 8 0.93
21 21 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 43 0 0 0.000 0 1.00
22 22 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 43 0 0 0.000 0 1.00
23 23 A 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.000 0 1.00
24 24 A 0 0 0 0 0 98 0 0 2 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.110 3 0.90
25 25 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 93 7 0 0 0 0 43 0 0 0.253 8 0.87
26 26 A 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.000 0 1.00
27 27 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.000 0 1.00
28 28 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 43 0 0 0.000 0 1.00
29 29 A 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.000 0 1.00
30 30 A 28 0 72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.592 19 0.81
31 31 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 43 0 0 0.000 0 1.00
32 32 A 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.000 0 1.00
33 33 A 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 43 0 0 0.000 0 1.00
34 34 A 0 0 0 0 2 0 98 0 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.110 3 1.00
35 35 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 43 0 0 0.000 0 1.00
36 36 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60 0 40 43 0 0 0.671 22 0.75
37 37 A 0 0 0 0 0 0 0 60 0 0 0 0 0 0 0 0 0 0 40 0 43 0 26 0.671 22 0.45
38 38 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.000 0 1.00
39 39 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 43 0 0 0.000 0 1.00
40 40 A 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 43 0 0 0.000 0 1.00
41 41 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.000 0 1.00
42 42 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 43 0 0 0.000 0 1.00
43 43 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.000 0 1.00
44 44 A 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.000 0 1.00
45 45 A 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.000 0 1.00
46 46 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 43 0 0 0.000 0 1.00
47 47 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 43 0 0 0.000 0 1.00
48 48 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 43 0 0 0.000 0 1.00
49 49 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 43 0 0 0.000 0 1.00
50 50 A 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.000 0 1.00
51 51 A 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 43 0 0 0.000 0 1.00
52 52 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 43 0 0 0.000 0 1.00
53 53 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 43 0 0 0.000 0 1.00
54 54 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.000 0 1.00
55 55 A 0 93 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.253 8 0.97
56 56 A 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 63 7 5 23 43 0 0 1.047 34 0.47
57 57 A 0 0 0 91 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 43 0 0 0.309 10 0.84
58 58 A 0 91 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.309 10 0.85
59 59 A 0 0 0 0 0 0 0 7 21 0 0 0 0 0 0 2 0 69 0 0 42 0 0 0.863 28 0.39
60 60 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 79 0 0 0 0 42 0 0 0.520 17 0.74
61 61 A 0 0 0 0 0 0 0 0 23 0 3 0 0 0 0 8 67 0 0 0 39 0 0 0.900 30 0.26
62 62 A 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 72 0 25 0 0 36 0 0 0.681 22 0.34
63 63 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 86 0 0 0 0 36 0 0 0.403 13 0.79
64 64 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50 0 50 0 0 10 0 0 0.693 23 0.41
65 65 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 9 0 0 0.000 0 1.00
66 66 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 5 0 0 0.000 0 1.00
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
14 38 38 1 gGg
15 38 38 1 gGg
16 38 38 1 gGg
17 38 38 1 gGg
18 38 38 1 gGg
19 38 38 1 gGg
20 38 38 1 gGg
21 38 38 1 gGg
22 38 38 1 gGg
23 38 38 1 gGg
24 38 38 1 gGg
25 38 38 1 gGg
26 38 38 1 gGg
27 38 38 1 gGg
28 38 38 1 gGg
29 38 38 1 gGg
31 38 38 1 gGg
32 38 38 1 gGg
33 38 38 1 gGg
34 38 38 1 gGg
35 38 38 1 gGg
36 38 38 1 gGg
37 38 38 1 gGg
38 38 38 1 gGg
39 38 38 1 gGg
40 38 38 1 gGg
//