Complet list of 1xrd hssp file
Complete list of 1xrd.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1XRD
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-13
HEADER MEMBRANE PROTEIN 14-OCT-04 1XRD
COMPND MOL_ID: 1; MOLECULE: LIGHT-HARVESTING PROTEIN B-880, ALPHA CHAIN; CHAI
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: RHODOSPIRILLUM RUBRUM; ORGANISM_TAXID:
AUTHOR Z.-Y.WANG,K.GOKAN,M.KOBAYASHI,T.NOZAWA
DBREF 1XRD A 1 52 UNP P02947 LHA_RHORU 1 52
SEQLENGTH 52
NCHAIN 1 chain(s) in 1XRD data set
NALIGN 158
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : G2T9D5_RHORU 1.00 1.00 1 52 1 52 52 0 0 62 G2T9D5 Antenna complex, alpha/subunit beta OS=Rhodospirillum rubrum F11 GN=F11_15245 PE=3 SV=1
2 : LHA_RHORU 1XRD 1.00 1.00 1 52 1 52 52 0 0 62 P02947 Light-harvesting protein B-870 alpha chain OS=Rhodospirillum rubrum PE=1 SV=1
3 : Q2RQ24_RHORT 1.00 1.00 1 52 1 52 52 0 0 62 Q2RQ24 Antenna complex, alpha/beta subunit OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=Rru_A2976 PE=3 SV=1
4 : H1G753_9GAMM 0.80 0.91 1 45 1 45 45 0 0 57 H1G753 Light-Harvesting I Complex, alpha subunit OS=Ectothiorhodospira sp. PHS-1 GN=ECTPHS_13290 PE=3 SV=1
5 : H1G621_9GAMM 0.78 0.93 1 46 1 46 46 0 0 61 H1G621 Light-Harvesting I Complex, alpha subunit OS=Ectothiorhodospira sp. PHS-1 GN=ECTPHS_11260 PE=3 SV=1
6 : H6SJF7_RHOPH 0.77 0.87 1 52 1 52 52 0 0 58 H6SJF7 Antenna complex, alpha/beta subunit OS=Rhodospirillum photometricum DSM 122 GN=RSPPHO_01496 PE=3 SV=1
7 : LHA_AFIMA 0.75 0.92 1 52 1 52 52 0 0 52 P80259 Light-harvesting protein B-880 alpha chain OS=Afifella marina PE=1 SV=1
8 : B9R4N0_9RHOB 0.74 0.88 1 42 1 42 42 0 0 66 B9R4N0 Antenna complex alpha/beta subunit domain protein OS=Labrenzia alexandrii DFL-11 GN=SADFL11_2162 PE=3 SV=1
9 : K2IZQ9_9PROT 0.74 0.95 7 45 1 39 39 0 0 59 K2IZQ9 Antenna complex subunit alpha/beta OS=Oceanibaculum indicum P24 GN=P24_09111 PE=3 SV=1
10 : O30842_ECTSH 0.74 0.89 1 46 1 46 46 0 0 61 O30842 B880 antenna alpha-subunit OS=Ectothiorhodospira shaposhnikovii GN=pufA PE=3 SV=1
11 : Q07S00_RHOP5 0.73 0.83 1 48 1 48 48 0 0 56 Q07S00 Antenna complex, alpha/beta subunit OS=Rhodopseudomonas palustris (strain BisA53) GN=RPE_1332 PE=3 SV=1
12 : Q9F212_9BURK 0.73 0.96 1 49 1 49 49 0 0 63 Q9F212 LH1 alpha subunit OS=Roseateles depolymerans GN=pufA PE=3 SV=1
13 : V4LHY2_9GAMM 0.73 0.86 1 44 1 44 44 0 0 60 V4LHY2 Uncharacterized protein OS=uncultured Thiohalocapsa sp. PB-PSB1 GN=N838_06015 PE=3 SV=1
14 : F5RI09_9RHOO 0.72 0.87 6 52 1 47 47 0 0 61 F5RI09 Antenna complex alpha/beta subunit OS=Methyloversatilis universalis FAM5 GN=METUNv1_03959 PE=3 SV=1
15 : H9LRY7_THIRO 0.72 0.86 1 43 1 43 43 0 0 44 H9LRY7 Light harvesting complex alpha subunit 2 OS=Thiocapsa roseopersicina GN=pufA2 PE=3 SV=1
16 : B6ITV1_RHOCS 0.71 0.87 1 52 1 52 52 0 0 58 B6ITV1 Light-Harvesting I Complex, alpha subunit OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=pufA PE=3 SV=1
17 : Q219S6_RHOPB 0.71 0.83 1 48 1 48 48 0 0 56 Q219S6 Antenna complex, alpha/beta subunit OS=Rhodopseudomonas palustris (strain BisB18) GN=RPC_1298 PE=3 SV=1
18 : Q9R4K5_PHAMO 0.71 0.89 1 45 1 45 45 0 0 50 Q9R4K5 LH1 ALPHA=CORE antenna light-harvesting complex 1 alpha-polypeptide OS=Phaeospirillum molischianum PE=3 SV=1
19 : F9U7P2_9GAMM 0.70 0.84 1 43 1 43 43 0 0 44 F9U7P2 Antenna complex alpha/beta subunit (Precursor) OS=Thiocapsa marina 5811 GN=ThimaDRAFT_1118 PE=3 SV=1
20 : H0S7J7_9BRAD 0.70 0.87 1 47 1 47 47 0 0 62 H0S7J7 Light harvesting 1 alpha subunit OS=Bradyrhizobium sp. ORS 285 GN=pufA PE=3 SV=1
21 : H0SQA5_9BRAD 0.70 0.87 1 47 1 47 47 0 0 62 H0SQA5 Light harvesting 1 alpha subunit OS=Bradyrhizobium sp. ORS 375 GN=pufA PE=3 SV=1
22 : H0T6R4_9BRAD 0.70 0.87 1 47 1 47 47 0 0 62 H0T6R4 Light harvesting 1 alpha subunit OS=Bradyrhizobium sp. STM 3809 GN=pufA PE=3 SV=1
23 : K9H5I5_9PROT 0.70 0.85 1 47 1 47 47 0 0 58 K9H5I5 Light-harvesting LHI, alpha subunit OS=Caenispirillum salinarum AK4 GN=C882_1675 PE=3 SV=1
24 : LHA6_RHOAC 0.70 0.91 1 46 1 46 46 0 0 50 P35092 Light-harvesting protein B-880 alpha chain OS=Rhodoblastus acidophilus PE=1 SV=1
25 : M4ZZG5_9BRAD 0.70 0.87 1 47 1 47 47 0 0 62 M4ZZG5 Light harvesting 1 subunit alpha OS=Bradyrhizobium oligotrophicum S58 GN=S58_59130 PE=3 SV=1
26 : Q9F100_BRASO 0.70 0.87 1 47 1 47 47 0 0 62 Q9F100 Light harvesting 1 alpha subunit OS=Bradyrhizobium sp. (strain ORS278) GN=pufA PE=3 SV=1
27 : W0E1H3_MARPU 0.70 0.86 1 44 1 44 44 0 0 44 W0E1H3 Uncharacterized protein OS=Marichromatium purpuratum 984 GN=MARPU_13230 PE=3 SV=1
28 : D9QP84_BRESC 0.69 0.85 1 52 1 52 52 0 0 56 D9QP84 Antenna complex alpha/beta subunit (Precursor) OS=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) GN=Bresu_3041 PE=3 SV=1
29 : Q132L7_RHOPS 0.69 0.81 1 48 1 48 48 0 0 59 Q132L7 Antenna complex, alpha/beta subunit OS=Rhodopseudomonas palustris (strain BisB5) GN=RPD_3751 PE=3 SV=1
30 : Q2ISX1_RHOP2 0.69 0.81 1 48 1 48 48 0 0 59 Q2ISX1 Antenna complex, alpha/beta subunit OS=Rhodopseudomonas palustris (strain HaA2) GN=RPB_3996 PE=3 SV=1
31 : D3RP69_ALLVD 0.68 0.86 1 44 1 44 44 0 0 44 D3RP69 Antenna complex alpha/beta subunit OS=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) GN=Alvin_2549 PE=3 SV=1
32 : I0G2Z9_9BRAD 0.68 0.82 1 50 1 50 50 0 0 63 I0G2Z9 Light harvesting 1 alpha subunit PufA OS=Bradyrhizobium sp. S23321 GN=pufA PE=3 SV=1
33 : I3YAD6_THIV6 0.68 0.86 1 44 1 44 44 0 0 44 I3YAD6 Antenna complex alpha/beta subunit (Precursor) OS=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) GN=Thivi_1996 PE=3 SV=1
34 : Q93UZ3_ALLVI 0.68 0.86 1 44 1 44 44 0 0 44 Q93UZ3 2nd alpha subunit of light-harvesting 1 complex OS=Allochromatium vinosum GN=pufA2 PE=3 SV=1
35 : U1IMF3_9BRAD 0.68 0.82 1 50 1 50 50 0 0 63 U1IMF3 Light-harvesting protein B-880 alpha chain OS=Bradyrhizobium sp. DFCI-1 GN=C207_02900 PE=3 SV=1
36 : A9W6C0_METEP 0.67 0.83 1 52 1 52 52 0 0 62 A9W6C0 Antenna complex alpha/beta subunit (Precursor) OS=Methylobacterium extorquens (strain PA1) GN=Mext_2735 PE=3 SV=1
37 : B1ZDU6_METPB 0.67 0.83 1 52 1 52 52 0 0 62 B1ZDU6 Antenna complex alpha/beta subunit (Precursor) OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=Mpop_2857 PE=3 SV=1
38 : B7KQN7_METC4 0.67 0.83 1 52 1 52 52 0 0 62 B7KQN7 Antenna complex alpha/beta subunit OS=Methylobacterium extorquens (strain CM4 / NCIMB 13688) GN=Mchl_2962 PE=3 SV=1
39 : C5AUS4_METEA 0.67 0.83 1 52 1 52 52 0 0 62 C5AUS4 Light-harvesting complex 1 alpha chain OS=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) GN=pufA PE=3 SV=1
40 : C7C8K3_METED 0.67 0.83 1 52 1 52 52 0 0 62 C7C8K3 Light-harvesting complex 1 alpha chain OS=Methylobacterium extorquens (strain DSM 5838 / DM4) GN=pufA PE=3 SV=1
41 : H1KLS1_METEX 0.67 0.83 1 52 1 52 52 0 0 62 H1KLS1 Antenna complex alpha/beta subunit (Precursor) OS=Methylobacterium extorquens DSM 13060 GN=MetexDRAFT_3583 PE=3 SV=1
42 : K2QIJ3_9RHIZ 0.67 0.80 1 51 1 51 51 0 0 65 K2QIJ3 Antenna complex alpha/subunit beta OS=Agrobacterium albertimagni AOL15 GN=QWE_04133 PE=3 SV=1
43 : O70086_9PROT 0.67 0.85 1 46 1 46 46 0 0 59 O70086 Alpha subunit of light-harvesting 1 complex OS=Acidiphilium angustum GN=pufA PE=3 SV=1
44 : O82949_ALLVI 0.67 0.84 1 43 1 43 43 0 0 43 O82949 2nd alpha subunit of light-harvesting 1 complex (Fragment) OS=Allochromatium vinosum GN=pufA2 PE=3 SV=1
45 : Q7DL69_ACIRU 0.67 0.85 1 46 1 46 46 0 0 59 Q7DL69 Alpha subunit of light-harvesting 1 complex OS=Acidiphilium rubrum GN=pufA PE=3 SV=1
46 : Q83ZZ1_9GAMM 0.67 0.86 1 43 1 43 43 0 0 44 Q83ZZ1 Light-harvesting 1 antenna complex alpha subunit 3 OS=Lamprocystis purpurea GN=pufA3 PE=3 SV=1
47 : W0AI68_9SPHN 0.67 0.85 1 52 1 52 52 0 0 59 W0AI68 Light-harvesting protein B-870 alpha chain OS=Sphingomonas sanxanigenens DSM 19645 = NX02 GN=NX02_18430 PE=3 SV=1
48 : G2DXN0_9GAMM 0.66 0.86 1 44 1 44 44 0 0 44 G2DXN0 Antenna complex alpha/beta subunit OS=Thiorhodococcus drewsii AZ1 GN=ThidrDRAFT_0757 PE=3 SV=1
49 : LHA1_HALHL 0.66 0.89 1 44 1 44 44 0 0 46 P80100 Light-harvesting protein B800/850/890 alpha-1 chain (Fragment) OS=Halorhodospira halophila (strain DSM 244 / SL1) PE=1 SV=1
50 : A5EQ98_BRASB 0.65 0.82 1 51 1 51 51 0 0 62 A5EQ98 Light harvesting 1 alpha subunit OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=pufA PE=3 SV=1
51 : B0UCN4_METS4 0.65 0.85 1 52 1 52 52 0 0 59 B0UCN4 Antenna complex alpha/beta subunit OS=Methylobacterium sp. (strain 4-46) GN=M446_3702 PE=3 SV=1
52 : B3Q7A9_RHOPT 0.65 0.78 1 51 1 51 51 0 0 63 B3Q7A9 Antenna complex alpha/beta subunit OS=Rhodopseudomonas palustris (strain TIE-1) GN=Rpal_1715 PE=3 SV=1
53 : E6VJJ9_RHOPX 0.65 0.78 1 51 1 51 51 0 0 63 E6VJJ9 Antenna complex alpha/beta subunit OS=Rhodopseudomonas palustris (strain DX-1) GN=Rpdx1_3993 PE=3 SV=1
54 : LHA7_RHOAC 0.65 0.91 1 46 1 46 46 0 0 49 P35093 Light-harvesting protein B-880 alpha chain OS=Rhodoblastus acidophilus PE=1 SV=1
55 : M7YVU4_9RHIZ 0.65 0.85 1 52 1 52 52 0 0 62 M7YVU4 Antenna complex subunit alpha/beta OS=Methylobacterium mesophilicum SR1.6/6 GN=MmSR116_0802 PE=3 SV=1
56 : Q6N9L4_RHOPA 0.65 0.78 1 51 1 51 51 0 0 63 Q6N9L4 Light-harvesting complex 1 alpha chain (Precursor) OS=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) GN=pufA PE=3 SV=1
57 : Q0FYT1_9RHIZ 0.64 0.80 1 50 1 50 50 0 0 63 Q0FYT1 Uncharacterized protein OS=Fulvimarina pelagi HTCC2506 GN=FP2506_11742 PE=3 SV=1
58 : B8EPZ3_METSB 0.63 0.83 1 52 3 54 52 0 0 70 B8EPZ3 Antenna complex alpha/beta subunit OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=Msil_2057 PE=3 SV=1
59 : F0IZL2_ACIMA 0.63 0.80 1 49 1 49 49 0 0 60 F0IZL2 Light-harvesting 1 complex alpha subunit OS=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) GN=pufA PE=3 SV=1
60 : F7S2X6_9PROT 0.63 0.80 1 49 1 49 49 0 0 60 F7S2X6 PufA OS=Acidiphilium sp. PM GN=pufA PE=3 SV=1
61 : I9CJ90_9RHIZ 0.63 0.85 1 52 1 52 52 0 0 62 I9CJ90 Antenna complex subunit alpha/beta OS=Methylobacterium sp. GXF4 GN=WYO_3003 PE=3 SV=1
62 : B1M381_METRJ 0.62 0.83 1 52 1 52 52 0 0 63 B1M381 Antenna complex alpha/beta subunit OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=Mrad2831_2813 PE=3 SV=1
63 : G4E5A2_9GAMM 0.62 0.81 1 42 1 42 42 0 0 43 G4E5A2 Antenna complex alpha/beta subunit (Precursor) OS=Thiorhodospira sibirica ATCC 700588 GN=ThisiDRAFT_1481 PE=3 SV=1
64 : I3YAD4_THIV6 0.62 0.81 1 52 4 55 52 0 0 64 I3YAD4 Antenna complex alpha/beta subunit (Precursor) OS=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) GN=Thivi_1994 PE=3 SV=1
65 : J6UH76_9RHOB 0.62 0.79 1 52 1 52 52 0 0 60 J6UH76 Light-harvesting LHI, alpha subunit OS=Rhodovulum sp. PH10 GN=A33M_1598 PE=3 SV=1
66 : E0MPW6_9RHOB 0.61 0.82 1 49 1 49 49 0 0 60 E0MPW6 Conserved domain protein OS=Ahrensia sp. R2A130 GN=R2A130_1564 PE=3 SV=1
67 : H8FR61_PHAMO 0.61 0.76 1 51 1 51 51 0 0 61 H8FR61 Light harvesting 1 alpha subunit OS=Phaeospirillum molischianum DSM 120 GN=pufA PE=3 SV=1
68 : O32410_PHAMO 0.61 0.78 1 51 1 51 51 0 0 61 O32410 Light harvesting 1 alpha subunit OS=Phaeospirillum molischianum GN=pufA PE=3 SV=1
69 : Q8KZ67_9PROT 0.61 0.85 1 41 1 41 41 0 0 60 Q8KZ67 Light-harvesting protein, alpha chain OS=uncultured marine proteobacterium GN=pufA PE=3 SV=1
70 : S9S5E3_PHAFV 0.61 0.76 1 51 1 51 51 0 0 61 S9S5E3 Light harvesting 1 alpha subunit PufA OS=Phaeospirillum fulvum MGU-K5 GN=K678_12756 PE=3 SV=1
71 : A1WWW5_HALHL 0.60 0.83 1 52 1 52 52 0 0 64 A1WWW5 Antenna complex, alpha/beta subunit OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=Hhal_1410 PE=3 SV=1
72 : A3WHV7_9SPHN 0.60 0.76 1 42 1 42 42 0 0 42 A3WHV7 Uncharacterized protein OS=Erythrobacter sp. NAP1 GN=NAP1_09327 PE=3 SV=1
73 : E3I6E4_RHOVT 0.60 0.80 1 50 1 50 50 0 0 58 E3I6E4 Antenna complex alpha/beta subunit OS=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) GN=Rvan_0215 PE=3 SV=1
74 : LHA1_HALHR 0.60 0.85 1 47 1 47 47 0 0 52 P80102 Light-harvesting protein B800/830/1020 alpha-1 chain (Fragment) OS=Halorhodospira halochloris PE=1 SV=1
75 : LHA2_HALHL 0.60 0.80 1 45 1 45 45 0 0 47 P80101 Light-harvesting protein B800/850/890 alpha-2 chain (Fragment) OS=Halorhodospira halophila (strain DSM 244 / SL1) PE=1 SV=1
76 : O66385_THIAC 0.60 0.81 1 47 1 47 47 0 0 60 O66385 Alpha subunit of light-harvesting 1 complex OS=Thiobacillus acidophilus GN=pufA PE=3 SV=1
77 : A9DA68_9RHIZ 0.58 0.78 1 50 1 50 50 0 0 65 A9DA68 Antenna complex, alpha/beta subunit OS=Hoeflea phototrophica DFL-43 GN=HPDFL43_04016 PE=3 SV=1
78 : B8KEW4_9GAMM 0.58 0.75 1 52 1 52 52 0 0 63 B8KEW4 Antenna complex alpha/beta subunit domain protein OS=gamma proteobacterium NOR5-3 GN=NOR53_1498 PE=3 SV=1
79 : LHA1_RUBGI 0.58 0.85 1 52 1 52 52 0 0 67 I0HUL6 Light-harvesting protein B-870 alpha chain OS=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) GN=pufA PE=3 SV=1
80 : Q7DJB5_RUBGE 0.58 0.85 1 52 1 52 52 0 0 67 Q7DJB5 Alpha subunit of light-harvesting 1 (B870) complex OS=Rubrivivax gelatinosus GN=pufA PE=3 SV=1
81 : Q7DJG8_9SPHN 0.58 0.75 1 52 1 52 52 0 0 61 Q7DJG8 Light-harvesting 1 complex alpha subunit OS=Blastomonas natatoria GN=pufA PE=3 SV=1
82 : Q9K2S1_9SPHN 0.58 0.75 1 52 1 52 52 0 0 61 Q9K2S1 Light-harvesting 1 complex alpha subunit OS=Sphingomonas ursincola GN=pufA PE=3 SV=1
83 : G4E5A8_9GAMM 0.57 0.81 1 42 1 42 42 0 0 43 G4E5A8 Antenna complex alpha/beta subunit (Precursor) OS=Thiorhodospira sibirica ATCC 700588 GN=ThisiDRAFT_1487 PE=3 SV=1
84 : Q83ZZ8_9GAMM 0.57 0.80 1 44 4 47 44 0 0 63 Q83ZZ8 Light-harvesting 1 antenna complex alpha subunit 1 OS=Lamprocystis purpurea GN=pufA1 PE=3 SV=1
85 : Q9KWI5_ERYLO 0.57 0.74 1 42 1 42 42 0 0 42 Q9KWI5 Alpha subunit of light-harvesting 1 complex OS=Erythrobacter longus GN=pufA PE=3 SV=1
86 : A0Z4H8_9GAMM 0.56 0.78 1 50 1 50 50 0 0 60 A0Z4H8 Uncharacterized protein OS=marine gamma proteobacterium HTCC2080 GN=MGP2080_10218 PE=3 SV=1
87 : A4ACQ4_9GAMM 0.56 0.75 1 52 1 52 52 0 0 63 A4ACQ4 Antenna complex alpha/beta subunit OS=Congregibacter litoralis KT71 GN=KT71_19423 PE=3 SV=2
88 : B8Y5U5_BLAVI 0.56 0.80 2 42 10 50 41 0 0 69 B8Y5U5 Light harvesting complex 1 alpha-apoprotein OS=Blastochloris viridis GN=pufA PE=3 SV=1
89 : F9U7P4_9GAMM 0.56 0.81 1 52 1 52 52 0 0 67 F9U7P4 Antenna complex alpha/beta subunit (Precursor) OS=Thiocapsa marina 5811 GN=ThimaDRAFT_1120 PE=3 SV=1
90 : H9LT92_THIRO 0.56 0.83 1 52 1 52 52 0 0 67 H9LT92 Light harvesting complex alpha subunit 3 OS=Thiocapsa roseopersicina GN=pufA3 PE=3 SV=1
91 : LHA1_RUBGE 0.56 0.83 1 52 1 52 52 0 0 67 P0DJO0 Light-harvesting protein B-870 alpha chain OS=Rubrivivax gelatinosus GN=pufA PE=1 SV=1
92 : LHA_BLAVI 0.56 0.80 2 42 10 50 41 0 0 69 P04123 Light-harvesting protein B-1015 alpha chain OS=Blastochloris viridis GN=pufA PE=1 SV=3
93 : Q58PN0_9PROT 0.56 0.77 1 52 1 52 52 0 0 69 Q58PN0 Light-harvesting LHI alpha subunit OS=uncultured proteobacterium DelRiverFos06H03 GN=pufA PE=3 SV=1
94 : Q8RTW7_9PROT 0.56 0.78 1 50 1 50 50 0 0 60 Q8RTW7 Light-harvesting protein B-880, alpha chain OS=uncultured marine proteobacterium GN=MBMO_EBAC000-65D09.14 PE=3 SV=1
95 : A8LQ15_DINSH 0.55 0.83 1 42 4 45 42 0 0 53 A8LQ15 Light-harvesting protein B-870 alpha chain OS=Dinoroseobacter shibae (strain DSM 16493 / NCIMB 14021 / DFL 12) GN=pufA PE=3 SV=1
96 : D3RP67_ALLVD 0.55 0.80 1 44 5 48 44 0 0 66 D3RP67 Antenna complex alpha/beta subunit OS=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) GN=Alvin_2547 PE=3 SV=1
97 : Q93UZ1_ALLVI 0.55 0.80 1 44 5 48 44 0 0 66 Q93UZ1 3rd alpha subunit of light-harvesting 1 complex OS=Allochromatium vinosum GN=pufA3 PE=3 SV=1
98 : W0E1H8_MARPU 0.55 0.78 1 49 1 49 49 0 0 61 W0E1H8 Light-harvesting protein B-870 alpha chain OS=Marichromatium purpuratum 984 GN=MARPU_13255 PE=3 SV=1
99 : W0E1X3_MARPU 0.55 0.73 1 44 1 44 44 0 0 44 W0E1X3 Uncharacterized protein OS=Marichromatium purpuratum 984 GN=MARPU_13375 PE=3 SV=1
100 : A3VXX5_9RHOB 0.54 0.85 2 42 5 45 41 0 0 53 A3VXX5 LHI alpha, Light-harvesting B875 protein OS=Roseovarius sp. 217 GN=ROS217_22302 PE=3 SV=1
101 : A6DYG8_9RHOB 0.54 0.85 2 42 5 45 41 0 0 53 A6DYG8 LHI alpha, Light-harvesting B875 protein OS=Roseovarius sp. TM1035 GN=RTM1035_12143 PE=3 SV=1
102 : D5AP85_RHOCB 0.53 0.76 1 49 4 52 49 0 0 58 D5AP85 Light-harvesting protein B-870, alpha subunit OS=Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003) GN=pufA PE=3 SV=1
103 : I3YAE1_THIV6 0.53 0.78 1 49 6 54 49 0 0 65 I3YAE1 Antenna complex alpha/beta subunit (Precursor) OS=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) GN=Thivi_2001 PE=3 SV=1
104 : LHA1_RHOCA 0.53 0.76 1 49 4 52 49 0 0 58 P02948 Light-harvesting protein B-870 alpha chain OS=Rhodobacter capsulatus GN=pufA PE=1 SV=1
105 : Q6XBJ8_9RHIZ 0.53 0.78 2 52 6 56 51 0 0 67 Q6XBJ8 Alpha subunit of light-harvesting 1 complex OS=Roseospirillum parvum GN=pufA PE=3 SV=1
106 : V4JVR6_9GAMM 0.53 0.76 1 49 1 49 49 0 0 63 V4JVR6 Uncharacterized protein OS=uncultured Thiohalocapsa sp. PB-PSB1 GN=N838_06025 PE=3 SV=1
107 : V8AKT5_RHOCA 0.53 0.76 1 49 4 52 49 0 0 58 V8AKT5 Light-harvesting protein B-870 alpha chain OS=Rhodobacter capsulatus DE442 GN=U714_04660 PE=3 SV=1
108 : V8GT70_RHOCA 0.53 0.76 1 49 4 52 49 0 0 58 V8GT70 Light-harvesting protein B-870 alpha chain OS=Rhodobacter capsulatus R121 GN=U717_04665 PE=3 SV=1
109 : V8H1D5_RHOCA 0.53 0.76 1 49 4 52 49 0 0 58 V8H1D5 Light-harvesting protein B-870 alpha chain OS=Rhodobacter capsulatus YW1 GN=U703_12680 PE=3 SV=1
110 : V8H4R9_RHOCA 0.53 0.76 1 49 4 52 49 0 0 58 V8H4R9 Light-harvesting protein B-870 alpha chain OS=Rhodobacter capsulatus B6 GN=U716_09555 PE=3 SV=1
111 : V8HNI3_RHOCA 0.53 0.76 1 49 4 52 49 0 0 58 V8HNI3 Light-harvesting protein B-870 alpha chain OS=Rhodobacter capsulatus YW2 GN=U713_08785 PE=3 SV=1
112 : V8MZ78_RHOCA 0.53 0.76 1 49 4 52 49 0 0 58 V8MZ78 Light-harvesting protein B-870 alpha chain OS=Rhodobacter capsulatus Y262 GN=U715_04655 PE=3 SV=1
113 : A1WXF8_HALHL 0.52 0.75 1 52 1 52 52 0 0 67 A1WXF8 Antenna complex, alpha/beta subunit OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=Hhal_1606 PE=3 SV=1
114 : A6FQ04_9RHOB 0.52 0.83 1 42 4 45 42 0 0 53 A6FQ04 LHI alpha, Light-harvesting B875 protein OS=Roseobacter sp. AzwK-3b GN=RAZWK3B_19621 PE=3 SV=1
115 : L0H0V8_9GAMM 0.52 0.81 1 48 1 48 48 0 0 64 L0H0V8 Antenna complex alpha/beta subunit OS=Thioflavicoccus mobilis 8321 GN=Thimo_3001 PE=3 SV=1
116 : Q9XDV1_9SPHN 0.52 0.69 1 52 1 52 52 0 0 65 Q9XDV1 Light harvesting I alpha subunit OS=Erythrobacter sp. MBIC3960 GN=pufA PE=3 SV=1
117 : A3PKY9_RHOS1 0.51 0.81 1 47 4 50 47 0 0 58 A3PKY9 Antenna complex, alpha/beta subunit OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=Rsph17029_1901 PE=3 SV=1
118 : A4WU58_RHOS5 0.51 0.81 1 47 4 50 47 0 0 58 A4WU58 Antenna complex, alpha/beta subunit OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=Rsph17025_2031 PE=3 SV=1
119 : B9KJZ6_RHOSK 0.51 0.81 1 47 4 50 47 0 0 58 B9KJZ6 Light-harvesting protein B-875 alpha chain PufA OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=RSKD131_1583 PE=3 SV=1
120 : D3RP74_ALLVD 0.51 0.73 1 49 5 53 49 0 0 64 D3RP74 Antenna complex alpha/beta subunit OS=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) GN=Alvin_2554 PE=3 SV=1
121 : F5M246_RHOSH 0.51 0.81 1 47 4 50 47 0 0 58 F5M246 Light-harvesting protein B-875 alpha chain PufA OS=Rhodobacter sphaeroides WS8N GN=RSWS8N_06585 PE=3 SV=1
122 : G2DXN5_9GAMM 0.51 0.76 1 49 6 54 49 0 0 65 G2DXN5 Antenna complex alpha/beta subunit OS=Thiorhodococcus drewsii AZ1 GN=ThidrDRAFT_0762 PE=3 SV=1
123 : L1K7P7_9RHOB 0.51 0.81 1 47 4 50 47 0 0 58 L1K7P7 Light-harvesting LHI, alpha subunit OS=Rhodobacter sp. AKP1 GN=D516_3166 PE=3 SV=1
124 : LHA1_RHOS4 0.51 0.81 1 47 4 50 47 0 0 58 Q3J1A4 Light-harvesting protein B-875 alpha chain OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=pufA PE=3 SV=1
125 : LHA1_RHOSH 4JC9 0.51 0.81 1 47 4 50 47 0 0 58 P0C0X9 Light-harvesting protein B-875 alpha chain OS=Rhodobacter sphaeroides GN=pufA PE=1 SV=1
126 : O82944_ALLVI 0.51 0.73 1 49 5 53 49 0 0 64 O82944 Alpha subunit of light-harvesting 1 complex OS=Allochromatium vinosum GN=pufA PE=3 SV=1
127 : Q7B2Z9_RHOSH 0.51 0.81 1 47 4 50 47 0 0 58 Q7B2Z9 Light harvesting 1 a(B850a) polypeptide OS=Rhodobacter sphaeroides GN=pufA PE=3 SV=1
128 : C8RYQ8_9RHOB 0.50 0.79 1 42 4 45 42 0 0 58 C8RYQ8 Antenna complex alpha/beta subunit OS=Rhodobacter sp. SW2 GN=Rsw2DRAFT_0936 PE=3 SV=1
129 : G1BIX7_9GAMM 0.50 0.82 1 44 8 50 44 1 1 67 G1BIX7 Alpha subunit of light-harvesting 1 complex OS=Thiorhodovibrio winogradskyi GN=pufA PE=3 SV=1
130 : H9LT91_THIRO 0.50 0.71 1 52 7 58 52 0 0 70 H9LT91 Light harvesting complex alpha subunit 1 OS=Thiocapsa roseopersicina GN=pufA1 PE=3 SV=1
131 : L0H206_9GAMM 0.50 0.69 1 48 1 48 48 0 0 64 L0H206 Antenna complex alpha/beta subunit (Precursor) OS=Thioflavicoccus mobilis 8321 GN=Thimo_2994 PE=3 SV=1
132 : Q83ZZ3_9GAMM 0.50 0.81 1 52 1 52 52 0 0 63 Q83ZZ3 Light-harvesting 1 antenna complex alpha subunit 2 OS=Lamprocystis purpurea GN=pufA2 PE=3 SV=1
133 : U4URQ7_9RHOB 0.50 0.81 1 42 4 45 42 0 0 52 U4URQ7 Antenna complex alpha/beta subunit OS=Rhodobacteraceae bacterium HIMB11 GN=HIMB11_02844 PE=3 SV=1
134 : V4JVS1_9GAMM 0.50 0.75 1 52 5 56 52 0 0 65 V4JVS1 Uncharacterized protein OS=uncultured Thiohalocapsa sp. PB-PSB1 GN=N838_06050 PE=3 SV=1
135 : LHA1_RHOTE 0.49 0.73 2 52 6 56 51 0 0 72 P80588 Light-harvesting polypeptide B-885 alpha-1 chain OS=Rhodocyclus tenuis PE=1 SV=1
136 : LHA2_RHOTE 0.49 0.73 2 52 6 56 51 0 0 60 P80589 Light-harvesting polypeptide B-885 alpha-2 chain OS=Rhodocyclus tenuis PE=1 SV=1
137 : Q9WXE0_RHOSU 0.49 0.76 1 51 4 54 51 0 0 54 Q9WXE0 PufA protein OS=Rhodovulum sulfidophilum GN=pufA PE=3 SV=1
138 : A3V2P7_9RHOB 0.48 0.76 1 42 4 45 42 0 0 50 A3V2P7 LHI alpha, Light-harvesting B875 protein OS=Loktanella vestfoldensis SKA53 GN=SKA53_12363 PE=3 SV=1
139 : A4EG60_9RHOB 0.48 0.76 1 42 4 45 42 0 0 52 A4EG60 Light-harvesting protein B-875, alpha chain OS=Roseobacter sp. CCS2 GN=RCCS2_08334 PE=3 SV=1
140 : C7DFP7_9RHOB 0.48 0.74 1 42 4 45 42 0 0 54 C7DFP7 Conserved domain protein OS=Thalassiobium sp. R2A62 GN=TR2A62_2743 PE=3 SV=1
141 : F9U7N7_9GAMM 0.48 0.69 1 52 7 58 52 0 0 70 F9U7N7 Antenna complex alpha/beta subunit (Precursor) OS=Thiocapsa marina 5811 GN=ThimaDRAFT_1113 PE=3 SV=1
142 : G1BIY1_9GAMM 0.48 0.77 1 44 8 50 44 1 1 67 G1BIY1 Alpha subunit of light-harvesting 1 complex OS=Thiorhodovibrio winogradskyi GN=pufA PE=3 SV=1
143 : H3NRQ9_9GAMM 0.48 0.80 3 52 9 58 50 0 0 66 H3NRQ9 Antenna complex alpha/beta subunit OS=gamma proteobacterium HIMB55 GN=OMB55_00005940 PE=3 SV=1
144 : Q6BA67_9PROT 0.47 0.78 1 51 4 54 51 0 0 54 Q6BA67 Putative light-harvesting protein alpha chain OS=uncultured proteobacterium eBACred25D05 GN=pufA PE=3 SV=1
145 : B6B3R2_9RHOB 0.45 0.79 1 42 5 46 42 0 0 55 B6B3R2 Antenna complex alpha/beta subunit, putative OS=Rhodobacteraceae bacterium HTCC2083 GN=RB2083_2409 PE=3 SV=1
146 : F3LQC6_9BURK 0.45 0.79 11 52 1 42 42 0 0 57 F3LQC6 Uncharacterized protein OS=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 GN=RBXJA2T_09467 PE=3 SV=1
147 : J7FY18_9RHOB 0.45 0.71 1 42 4 45 42 0 0 55 J7FY18 Light-harvesting protein B-870 alpha chain OS=Sulfitobacter guttiformis GN=pufA PE=3 SV=1
148 : LHA2_HALHR 0.45 0.77 1 47 1 47 47 0 0 65 P80103 Light-harvesting protein B800/830/1020 alpha-2 chain OS=Halorhodospira halochloris PE=1 SV=1
149 : Q58PR7_9PROT 0.45 0.77 1 47 4 50 47 0 0 63 Q58PR7 Light-harvesting protein b-870 alpha chain-related protein OS=uncultured proteobacterium DelRiverFos13D03 GN=pufA PE=3 SV=1
150 : Q8KZ17_9PROT 0.45 0.74 1 42 4 45 42 0 0 50 Q8KZ17 Antenna pigment protein, alpha chain OS=uncultured marine proteobacterium GN=pufA PE=3 SV=1
151 : L0GY40_9GAMM 0.44 0.73 1 48 1 48 48 0 0 64 L0GY40 Antenna complex alpha/beta subunit (Precursor) OS=Thioflavicoccus mobilis 8321 GN=Thimo_2987 PE=3 SV=1
152 : L0H212_9GAMM 0.44 0.77 1 48 14 61 48 0 0 77 L0H212 Antenna complex alpha/beta subunit OS=Thioflavicoccus mobilis 8321 GN=Thimo_2999 PE=3 SV=1
153 : Q8GNU1_9RHOB 0.43 0.75 1 51 4 54 51 0 0 54 Q8GNU1 PufA OS=Rhodovulum euryhalinum GN=pufA PE=3 SV=1
154 : G2DXM8_9GAMM 0.42 0.75 1 52 1 53 53 1 1 62 G2DXM8 Antenna complex alpha/beta subunit (Precursor) OS=Thiorhodococcus drewsii AZ1 GN=ThidrDRAFT_0755 PE=3 SV=1
155 : L0H0D1_9GAMM 0.40 0.73 1 52 1 52 52 0 0 64 L0H0D1 Antenna complex alpha/beta subunit OS=Thioflavicoccus mobilis 8321 GN=Thimo_2990 PE=3 SV=1
156 : Q28W21_JANSC 0.39 0.69 1 49 4 51 49 1 1 55 Q28W21 Light-harvesting protein B-870 alpha chain OS=Jannaschia sp. (strain CCS1) GN=pufA PE=3 SV=1
157 : L0GY44_9GAMM 0.38 0.83 1 52 1 52 52 0 0 64 L0GY44 Antenna complex alpha/beta subunit (Precursor) OS=Thioflavicoccus mobilis 8321 GN=Thimo_2992 PE=3 SV=1
158 : V7EMJ2_9RHOB 0.37 0.67 1 51 4 53 51 1 1 54 V7EMJ2 Light-harvesting protein B-870 alpha chain OS=Rhodobacter sp. CACIA14H1 GN=Q27BPR15_06835 PE=3 SV=1
## ALIGNMENTS 1 - 70
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A M > 0 0 182 148 26 MMMMMMMM MMMM MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMLMMMMMMMMMMMM
2 2 A W G > - 0 0 211 155 46 WWWWWWWW WWWH HWWWHWWWHYWWHWWWHWHHWHHHHHHWWHWHWHWWHWWYHWGYWWHHYYWHWWSW
3 3 A R G > S- 0 0 207 156 24 RRRRRRKK RRKK KRRKKRRRKKRRKRRRKRKKRKKKKKKRRKRKRKRRKRRKKRQKRRKKKKKKKKRK
4 4 A I G X> S- 0 0 64 156 23 IIITVIVM VIII ILIIVLLLVLLLIIIIIILIIIIIIIIVMIMIVILLIIILVIIIMMVVMLIIIIII
5 5 A W G <4 S- 0 0 195 156 0 WWWWWWWW WWWW WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
6 6 A Q G <4 S+ 0 0 140 157 55 QQQLLLLL LLLQMQLLTQLLLLLLLQLLLQLQQLLLLLLLLLQLQLQKLLLLLLLLLLLLLLQLLTTMT
7 7 A L T <4 S- 0 0 115 158 39 LLLLLLLLMLLLILILLLILLLLLLLILLLILIILLLLLLLMLILIIILLLLLLLLLVLLLLYILLLLIL
8 8 A F S < S+ 0 0 153 158 17 FFFFFFFFFFFFFFFFFYFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFYFFFFFFFFFFFFFFFFFYYFY
9 9 A D S > S+ 0 0 81 158 5 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
10 10 A P H > S+ 0 0 30 158 13 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
11 11 A R H > S+ 0 0 136 159 17 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
12 12 A Q H > S+ 0 0 108 159 31 QQQRRRRRKRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRKRRRRRRRRRRRRRRRRRRRRRRRRRRRR
13 13 A A H X S+ 0 0 49 159 59 AAAAAATVAAAAASTTATAVVVAAVVTAAATATTATTTTTTAVTVTATVVTAATTAAAVVTTTTVVATVA
14 14 A L H X S+ 0 0 113 159 13 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
15 15 A V H X S+ 0 0 65 159 32 VVVVVVVVVVVVVVVVVSSVVVIVVVVVVVVVVVVVVVVVVVTVTVVVIVVVVVVVIITTVVTVVVTTVT
16 16 A G H X S+ 0 0 37 159 30 GGGAAGALAALAAAGALGGAAAAAAAAALLAAAAAAAAAAAAAAAAAAGAALLAALGGAAAAAAAAAAAA
17 17 A L H X S+ 0 0 108 159 62 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLIILLLLLLLLLLLLLLLLLLLQL
18 18 A A H X S+ 0 0 50 159 85 AAAFFFFTSFFFAFFAFFLGGGFSGGLAFFFFFFFFFFFFFSGFGFFFFGAFFSFFFFGGFFFFFAFFGF
19 19 A T H X S+ 0 0 69 159 60 TTTTTATVATTAGTGTTTGVVVTAVVGVVVGTGGTTTTTTTVVGVGIGSIVVVATVTVVVTTTGTVVTVV
20 20 A F H X S+ 0 0 144 159 13 FFFFFFFFFVFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFWFFFFFFFFFFFFFFFFFFFFF
21 21 A L H X S+ 0 0 103 159 7 LLLLLLLLLPLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
22 22 A F H X S+ 0 0 135 159 53 FFFAAAFFFGFFAMLFFTLFFFFFFFFFFFFFLFFFFFFFFFFFFLFFAFFFFFFFLFFFFFTFTFTTFT
23 23 A V H X S+ 0 0 54 159 58 VVVVVVVSTVGVVVVGGVVGGGVVGGVTGGVGVVGVVVVVVTAVAIVVVGTGGVIGVGAAIIVVITVVSV
24 24 A L H X S+ 0 0 79 159 4 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLVL
25 25 A A H X S+ 0 0 48 159 16 AAAAAAAAAAAAAAAAGGAAAAAAAAAAAAGAAGAAAAAAAAAGAAAGAAAAAGAAAAAAAAAAAAGGAG
26 26 A L H X S+ 0 0 81 159 41 LLLLLLLVILILLLLVILLLLLLLLLLLIILILLILLLLLLIILILLLLLIIILLILIIILLFLLVLLVL
27 27 A L H X S+ 0 0 102 159 40 LLLLLLLLLLIVLLLLILLVVVLIVVLLIILVLLVLLLLLLLLLLLLLVVLIIILILLLLLLILLLLLLL
28 28 A I H X S+ 0 0 83 159 0 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
29 29 A H H X S+ 0 0 126 159 0 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
30 30 A F H X S+ 0 0 125 159 20 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
31 31 A I H X S+ 0 0 107 159 26 IIIIILIIIIIIIIIIILIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIVLLVL
32 32 A L H X S+ 0 0 73 159 10 LLLLLLLLLLLLLLLLLLLLLLLALLLLLLLLLLLLLLLLLLLLLLLLLLLLLSLLLLLLLLVLLLLLLL
33 33 A L H X S+ 0 0 72 159 1 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
34 34 A S H X S+ 0 0 51 159 19 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSS
35 35 A T H X S+ 0 0 78 159 31 TTTTTTTTTTTTTTSTTTSTTTTTTTSSTTSTSSTTTTTTTTTSTSTSTTTTTTTTTTTTTTTSTTTTST
36 36 A E H X S+ 0 0 124 159 66 EEEEEEDEDESNADPDSDPNNNDDNNPPSSPDPPDDDDDDDEPPPADPDNNSSDDSADPPDDEPSEDDED
37 37 A R H X S+ 0 0 118 159 76 RRRRRRRRRRRKDRGRRRARRRRRRRARRRARAARRRRRRRRRARDRARRRRRRRRRRRRRRNARRRRKR
38 38 A F H X S+ 0 0 131 155 15 FFFFFFFYFFFYFFFFFFFFFFFFFFFYFFFFFFFFFFFFFFFFFFFFFFFFFFFFYFFFFFFFLYFFYF
39 39 A N H X S+ 0 0 78 159 8 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNDNDNNNNNNNNNNNNNDDNNNNNNNNNN
40 40 A W H < S+ 0 0 151 159 0 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
41 41 A L H < S+ 0 0 138 159 23 LLLMMLMLLMLLLILLLLLLLLLLLLVILLLLLLLLLLLLLLLHLLLLVLLLLLLLLLLLLLLLLLLLLL
42 42 A E H < S- 0 0 110 158 51 EEEHHEQEEHDDGEGEDDGEEETEEESDDDSDSSDEEEEEEEGTGGDSGEEDDEEDAEGGEDAQEDDD D
43 43 A G < + 0 0 20 139 55 GGGSSGG GSGGDGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGG GYVGG G
44 44 A A S S- 0 0 56 135 57 AAAAANA KAAPGP AAA PPPPKPPAAPPSPASPPPPPPPRA A PSAPPPPKPPPPAAPP SPKAA A
45 45 A S S S+ 0 0 118 122 82 SSSSSPP PSKN S SKR RRRQPRR QKK R RKKKKKKPP P H RARRPKRARPPRR EQARR R
46 46 A T S S+ 0 0 81 118 71 TTT AVT AKT K AK AAAPAAA AKK K KDDDDDDLA A Q AVAAATAAVAAQN AVAVV V
47 47 A K S S+ 0 0 113 112 67 KKK KA TK K TT AAAS AA TTT A AAAAAAAT P AKAA NAESMMNN TPTAA A
48 48 A P S S+ 0 0 85 94 75 PPP AP AP P RA PAA K KKKKKKKT A KRKK KKGRTTKK PAAHH H
49 49 A V - 0 0 75 86 63 VVV AA V A A A T TAAAAAAS A TAAA AAGVTTAA AKSGG G
50 50 A Q S S- 0 0 186 67 57 QQQ QQ A A A S SAAAAAAS A SEAA AAGK AA AA SS S
51 51 A T 0 0 124 60 66 TTT VT T V A AAAAAAI T SISS NS A SE VA VV V
52 52 A S 0 0 187 48 41 SSS SS A A S AAAAAA A P A S NN SS
## ALIGNMENTS 71 - 140
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....8....:....9....:....0....:....1....:....2....:....3....:....4
1 1 A M > 0 0 182 148 26 MMMMMMMMMMMMMIMMM MMM MMFLLMM FLF MFFFFFFMFMMFFFLFLFFFLFFLLMMFL FFFF
2 2 A W G > - 0 0 211 155 46 WYWWWWWHWWHHYYYHHWHHWWWHYYYWHYYYWYHHYYYYYYWYYWYYYWYWYYYWYYHWHHYYWWYYYY
3 3 A R G > S- 0 0 207 156 24 RKRRRRRKRRRRKKKRKKKKRKRRKKKKKKKKKKKRKKKKKKRKKSKKKKKKKKKKKKKKKRKKKKKKKK
4 4 A I G X> S- 0 0 64 156 23 LIIIMMIIIIMMMIIVILIIILIVIIIIVIIIIIVIIIIIIIMILIIIIIIIIIIIIIIIIIIILLIIII
5 5 A W G <4 S- 0 0 195 156 0 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
6 6 A Q G <4 S+ 0 0 140 157 55 KHLKKLMMRRQQQLHMMLQQRLRMLLLMMLLLLLLQLLLLLLKLQLMMMLMLMMMLMLQLQQLTLLMLLL
7 7 A L T <4 S- 0 0 115 158 39 LHLVILIILLSSTIHLIIIILILLIAALMIIVLVMLVVVVVVIIIHIIILILIIILIIIIIWVIVVIVVI
8 8 A F S < S+ 0 0 153 158 17 YFFFLFFFFFFFFFFFFLFFFLFFFFFIFFFFIFFFFFFFFFLFLFFFFVFVFFFVFFIMMFFIMMFFFF
9 9 A D S > S+ 0 0 81 158 5 DDDDDDDDDDDDNNDDDDDDDDDDDDDDNDDDDDDDDDDDDDDDDDDDDDDDDDDDDDNDDDDQDDDDDD
10 10 A P H > S+ 0 0 30 158 13 PVPPYPPPPPGGPPVPPPPPPPPPPPPPPPPPPPPPPPPPPPYPPVPPPPPPPPPPPPPPPPPPPPPPPP
11 11 A R H > S+ 0 0 136 159 17 RRRRRRRRMMNNRSRRRRRRMRLRRRRRPRRRRRRRRRRRRRRRRRRRRRRRRRRRRRARRRRQRRRRRR
12 12 A Q H > S+ 0 0 108 159 31 RRRRRRKRRRRRGLRRRRRRRRRRRMMRLRRRVRSRRRRRRRRRQRRRRRRRRRRRRRQRARRTTTRRRR
13 13 A A H X S+ 0 0 49 159 59 VTVITVTIAAIITITVIVTTAVAVVAAVIVVVVVTSVVVVVVTVVVVVVIVVVVVIVVTITAVAVVVVVV
14 14 A L H X S+ 0 0 113 159 13 LLLLVLLLMMLLLLLLLLLLMLMLFLLLLFFFLFLLFFFFFFVFLLFFFLFLFFFLFFLLLLFLMMLFFF
15 15 A V H X S+ 0 0 65 159 32 IVVIVTVVVVTTTIVVVTVVVTVVVIIIAVVVIVVMVVVVVVVVIVVVVIVIVVVIVVVISMVIIIVVVV
16 16 A G H X S+ 0 0 37 159 30 GAAALAVAAAAAAGAAAAAAAALAAGGASAAAAAAAAAAAAALAGAAAAAAAAAAAAAAAAAAGGGAAAA
17 17 A L H X S+ 0 0 108 159 62 ILLTALQNQQLLLLLNNLLLQLQNQLLILQQQLQLLQQQQQQAQILQQQVQLQQQVQQLLILQLTTQQQQ
18 18 A A H X S+ 0 0 50 159 85 FHFAHGGAAAAAFFHAAFFFAFGAGGGFLGGGGGAFGGGGGGHGTHGGGFGGGGGFGGGFAFGAAAGGGG
19 19 A T H X S+ 0 0 69 159 60 SVAIVVVIVVVVASVAIVGGVVIAVAAAGAAVAVASVVVVVVVAVVVVVAVVVVVAVVVAVSVAAAVVVV
20 20 A F H X S+ 0 0 144 159 13 WGFWGFFFFFFFFFGFFYFFFYFFFFFFGFFFFFFFFFFFFFGFFGFFFFFFFFFFFFFFFFFFWWFFFF
21 21 A L H X S+ 0 0 103 159 7 LLLLMLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLMLLLLLLLLLLLLLLLQLLLLLLLLLLL
22 22 A F H X S+ 0 0 135 159 53 AAVIAFFFLLFFTIAFFTLLLTFFFFFLFFFFIFVMFFFFFFAFIAFFFTFIFFFTFFIIVFFAGGFFFF
23 23 A V H X S+ 0 0 54 159 58 VVVIVAATGGVVLVVVTVVVGVGVLAAVLLLLVLVALLLLLLVLPVLLLVLILLLVLLVVFVLVVVLLLL
24 24 A L H X S+ 0 0 79 159 4 LLLILLLLLLLLLLLLLILLLILLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
25 25 A A H X S+ 0 0 48 159 16 AAGAAAAAAAAAAAAAAAGGAAAAAAAAAAAAGAAAAAAAAAAAGAAAAGAGAAAGAAGGGAAGAAAAAA
26 26 A L H X S+ 0 0 81 159 41 LFLLLIVIVVLLFLFLVLLLVLALALLLLAAVLVLLVVVVVVLALFVVVLVLVVVLVALLLLALLLVAAA
27 27 A L H X S+ 0 0 102 159 40 VTLTLLMLLLLLIATFLLLLLLMFMFFAFMMLALLFLLLLLLLMLSMMMAMAMMMAMMGALVMVLLMMMM
28 28 A I H X S+ 0 0 83 159 0 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
29 29 A H H X S+ 0 0 126 159 0 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
30 30 A F H X S+ 0 0 125 159 20 FFFVFFLFLLFFFLFFFFFFLFLFLYYMFLLLMLFLLLLLLLFLFFLLLMLMLLLMLLMMAFLMFFLLLL
31 31 A I H X S+ 0 0 107 159 26 IIIIIIVIMMIIIIIVVGIIMGIVVMMIVVVIIILIIIIIIIIVLIIIIIIIIIIIIVIIGIVILLVVVV
32 32 A L H X S+ 0 0 73 159 10 LLLLLLLLLLLLVLLLLLLLLLLLLLLLLLLLLLCLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
33 33 A L H X S+ 0 0 72 159 1 LLLMLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
34 34 A S H X S+ 0 0 51 159 19 SSSTSSSSGGSSSSSSSSSSGSSSSRRSSSSSSSGMSSSSSSSSASSSSSSSSSSSSSSSSMSSGGSSSS
35 35 A T H X S+ 0 0 78 159 31 TTTTTTTTTTTTTTTSTTTTTTTSTSSTTTTTTTHSTTTTTTTTTTTTTTTTTTTTTSTTTSTTTTTNNN
36 36 A E H X S+ 0 0 124 159 66 DETEEPTANNNNETEGADAANDNGEPPTADDPAPDAPPPPPPEDEDPPPAPAPPPAPPDATPDTEEDEEP
37 37 A R H X S+ 0 0 118 159 76 RSRRSRRKKKRRNDTKKRDDKRKKHEEEEGGAEARDAAAAAASGDRSSSESESSSESALDDGYDRRYASE
38 38 A F H X S+ 0 0 131 155 15 FYYFFFFYYYYYFFYYYLFFYLFYFFFFFFFFFFFFFFFFFFFFLYYYYFYFYYYFYF.FLYYFFFFTTT
39 39 A N H X S+ 0 0 78 159 8 NNNNNDNNNNNNNNGNNNNNNNNNNDDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNNNNNNN
40 40 A W H < S+ 0 0 151 159 0 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
41 41 A L H < S+ 0 0 138 159 23 VLILLIFILLLLLLLLIWLLLWLLFLLLLFFLLLLLLLLLLLLFHLLLLLLLLLLLLLLLWVFLIILFFF
42 42 A E H < S- 0 0 110 158 51 GSDEEGEEDDEEAETDEESSDEDDELLETEETETETTTTTTTEEEDEEEEEEEEEEEDDEESEEDDTQQE
43 43 A G < + 0 0 20 139 55 G TGGAGGGGPP D GG DDG GG GGDG VDVGTVVVVVVG DNIIIDIDIIIDI DDDA DTTI
44 44 A A S S- 0 0 56 135 57 A PANGADAAPP G ED GGA AE PPGA AGANSAAAAAAN GSSSSGSGSSSGS GGGT GGGA
45 45 A S S S+ 0 0 118 122 82 A APPGPSKKMM VS ATK KV I TVTPKTTTTTTP RTAAAVAVAAAVA VRK MLLA
46 46 A T S S+ 0 0 81 118 71 V PA PVMKKPP MM PPK KM P APAAAAAAAAAY PTAAAPAPAAAPA PPA PKKE
47 47 A K S S+ 0 0 113 112 67 S AA AVAAAAA AA AAA PA A KAKAVKKKKKKG IGKKKAKAKKKAK AAQ AEEK
48 48 A P S S+ 0 0 85 94 75 S A TGPPAA AG AAP VA S HAHTAHHHHHHN PN A A A KPA VQQA
49 49 A V - 0 0 75 86 63 V A GAVVAA AA GGA AA P GSGKPGGGGGGA P T S T S P SKKA
50 50 A Q S S- 0 0 186 67 57 S S ASAAPP SS SKA AS A E A A A VAAG
51 51 A T 0 0 124 60 66 E TTTAA T AAT S A S P V S TTTA
52 52 A S 0 0 187 48 41 S AAAAA A AAA A A A A S N PAA
## ALIGNMENTS 141 - 158
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....5....:....6....:....7....:....8....:....9....:....0....:....1
1 1 A M > 0 0 182 148 26 LL FF FMFFMMFMMFMF
2 2 A W G > - 0 0 211 155 46 WH YY YWYYYWYHYYYY
3 3 A R G > S- 0 0 207 156 24 KKRKK KKKKKQKKKKKK
4 4 A I G X> S- 0 0 64 156 23 IVIIV ILVIIIVILVLI
5 5 A W G <4 S- 0 0 195 156 0 WWWWW WWWWWWWWWWWW
6 6 A Q G <4 S+ 0 0 140 157 55 LLRLL LKLLKKMLQLLL
7 7 A L T <4 S- 0 0 115 158 39 ILIVI IFIIIIIVIIII
8 8 A F S < S+ 0 0 153 158 17 MIFFF FVFFMLFFLFLF
9 9 A D S > S+ 0 0 81 158 5 NNDDD DDDDDDDDDDDD
10 10 A P H > S+ 0 0 30 158 13 PPPPP PFPPPPPPPPPP
11 11 A R H > S+ 0 0 136 159 17 RARRRMRRRRRARRRRRR
12 12 A Q H > S+ 0 0 108 159 31 PQRRRRRMRRSRRMGRRR
13 13 A A H X S+ 0 0 49 159 59 IVVVVAVTVVTTVAIVTV
14 14 A L H X S+ 0 0 113 159 13 LLLFFMFAFFLLLILFLF
15 15 A V H X S+ 0 0 65 159 32 IVVVVVVVVVLWVMLVAV
16 16 A G H X S+ 0 0 37 159 30 AAAAAAAGAAAAAGLAAA
17 17 A L H X S+ 0 0 108 159 62 LLQQQQQFQQILQLIQIQ
18 18 A A H X S+ 0 0 50 159 85 FGGGGAGHGGSTGAAGTG
19 19 A T H X S+ 0 0 69 159 60 GVVVVVVIVVVWVAVVAV
20 20 A F H X S+ 0 0 144 159 13 FFFFFFFFFFFFFFFFFF
21 21 A L H X S+ 0 0 103 159 7 LQLLLLLFLLLLLLQLLL
22 22 A F H X S+ 0 0 135 159 53 LIFFFLFAFFTIFLVFIF
23 23 A V H X S+ 0 0 54 159 58 VVSLLGLLLLLVLVALLL
24 24 A L H X S+ 0 0 79 159 4 LLVLLLLILLLLLLILLL
25 25 A A H X S+ 0 0 48 159 16 AGAAAAAAAAGGAAGAGA
26 26 A L H X S+ 0 0 81 159 41 LLVAVVAFAALLVFLALA
27 27 A L H X S+ 0 0 102 159 40 GGLMMLMAMMTLMALMLM
28 28 A I H X S+ 0 0 83 159 0 IIIIIIIVIIIIIIIIII
29 29 A H H X S+ 0 0 126 159 0 HHHHHHHHHHHHHHHHHH
30 30 A F H X S+ 0 0 125 159 20 LMFLLLLFLLFVLYILLL
31 31 A I H X S+ 0 0 107 159 26 VIVVVMVAVVGLFILVLV
32 32 A L H X S+ 0 0 73 159 10 LLLLLLLCLLLLVLLVLV
33 33 A L H X S+ 0 0 72 159 1 LLLLLLLILLLLLMLLLL
34 34 A S H X S+ 0 0 51 159 19 SSSSSGSSSSSKSVSSAS
35 35 A T H X S+ 0 0 78 159 31 TTSTNTNSNNTSNSTSTN
36 36 A E H X S+ 0 0 124 159 66 ADAEENPEPDEDPSVGVG
37 37 A R H X S+ 0 0 118 159 76 DLKHEKERAADDYsDLDI
38 38 A F H X S+ 0 0 131 155 15 F.YFTYTFYTLLFyL.L.
39 39 A N H X S+ 0 0 78 159 8 NNNNNNNNNNDNNDNNNN
40 40 A W H < S+ 0 0 151 159 0 WWWWWWWWWWWWWFWWWW
41 41 A L H < S+ 0 0 138 159 23 LLIFFMFLFFHHLLWFHF
42 42 A E H < S- 0 0 110 158 51 EDDENDTENSSTNQEEEQ
43 43 A G < + 0 0 20 139 55 DDGS G GI DDVGDNDT
44 44 A A S S- 0 0 56 135 57 GGPA A AA GGAPGAGA
45 45 A S S S+ 0 0 118 122 82 I YA K PS RRAPRARA
46 46 A T S S+ 0 0 81 118 71 P AA K AA PPEIPMPA
47 47 A K S S+ 0 0 113 112 67 A AA A AK AIKSSTIA
48 48 A P S S+ 0 0 85 94 75 K PA P PPAAPMPG
49 49 A V - 0 0 75 86 63 S AA A AELGLG
50 50 A Q S S- 0 0 186 67 57 A AG A GAK KA
51 51 A T 0 0 124 60 66 V MG T AAA AG
52 52 A S 0 0 187 48 41 S A A AA A
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 8 1 70 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 148 0 0 0.821 27 0.74
2 2 A 0 0 0 0 0 42 32 1 0 0 1 0 0 25 0 0 0 0 0 0 155 0 0 1.139 38 0.53
3 3 A 0 0 0 0 0 0 0 0 0 0 1 0 0 0 33 65 1 0 0 0 156 0 0 0.732 24 0.75
4 4 A 12 13 66 8 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 156 0 0 1.030 34 0.76
5 5 A 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 156 0 0 0.000 0 1.00
6 6 A 0 59 0 12 0 0 0 0 0 0 0 3 0 1 3 5 17 0 0 0 157 0 0 1.293 43 0.44
7 7 A 11 44 35 3 1 1 1 0 1 0 1 1 0 2 0 0 0 0 0 0 158 0 0 1.375 45 0.60
8 8 A 3 5 3 4 82 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 158 0 0 0.767 25 0.83
9 9 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 4 96 158 0 0 0.200 6 0.95
10 10 A 2 0 0 0 1 0 1 1 0 95 0 0 0 0 0 0 0 0 0 0 158 0 0 0.267 8 0.87
11 11 A 0 1 0 3 0 0 0 0 2 1 1 0 0 0 92 0 1 0 1 0 159 0 0 0.428 14 0.82
12 12 A 1 1 0 3 0 0 0 1 1 1 1 2 0 0 84 2 4 0 0 0 159 0 0 0.790 26 0.69
13 13 A 41 0 8 0 0 0 0 0 25 0 1 25 0 0 0 0 0 0 0 0 159 0 0 1.310 43 0.41
14 14 A 1 73 1 4 20 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 159 0 0 0.809 27 0.86
15 15 A 72 1 13 2 0 1 0 0 1 0 2 9 0 0 0 0 0 0 0 0 159 0 0 1.005 33 0.68
16 16 A 1 8 0 0 0 0 0 13 78 0 1 0 0 0 0 0 0 0 0 0 159 0 0 0.720 24 0.70
17 17 A 1 60 6 0 1 0 0 0 1 0 0 2 0 0 0 0 26 0 3 0 159 0 0 1.128 37 0.37
18 18 A 0 2 0 0 37 0 0 35 17 0 3 3 0 4 0 0 0 0 0 0 159 0 0 1.436 47 0.15
19 19 A 48 0 4 0 0 1 0 9 16 0 3 18 0 0 0 0 0 0 0 0 159 0 0 1.453 48 0.40
20 20 A 1 0 0 0 91 3 1 4 0 0 0 0 0 0 0 0 0 0 0 0 159 0 0 0.403 13 0.86
21 21 A 0 96 0 1 1 0 0 0 0 1 0 0 0 0 0 0 2 0 0 0 159 0 0 0.237 7 0.93
22 22 A 3 9 6 1 64 0 0 2 8 0 0 8 0 0 0 0 0 0 0 0 159 0 0 1.299 43 0.47
23 23 A 43 25 4 0 1 0 0 14 6 1 2 4 0 0 0 0 0 0 0 0 159 0 0 1.568 52 0.41
24 24 A 1 96 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 159 0 0 0.207 6 0.95
25 25 A 0 0 0 0 0 0 0 17 83 0 0 0 0 0 0 0 0 0 0 0 159 0 0 0.456 15 0.83
26 26 A 19 55 12 0 4 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 159 0 0 1.267 42 0.58
27 27 A 8 53 7 18 4 0 0 2 6 0 1 3 0 0 0 0 0 0 0 0 159 0 0 1.518 50 0.59
28 28 A 1 0 99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 159 0 0 0.038 1 1.00
29 29 A 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 159 0 0 0.000 0 1.00
30 30 A 1 28 1 6 62 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 159 0 0 1.007 33 0.80
31 31 A 16 8 69 4 1 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 159 0 0 1.030 34 0.73
32 32 A 3 94 0 0 0 0 0 0 1 0 1 0 1 0 0 0 0 0 0 0 159 0 0 0.283 9 0.90
33 33 A 0 98 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 159 0 0 0.106 3 0.99
34 34 A 1 0 0 1 0 0 0 5 1 0 89 1 0 0 1 1 0 0 0 0 159 0 0 0.512 17 0.81
35 35 A 0 0 0 0 0 0 0 0 0 0 15 79 0 1 0 0 0 0 6 0 159 0 0 0.669 22 0.69
36 36 A 1 0 0 0 0 0 0 3 10 25 6 4 0 0 0 0 0 18 9 25 159 0 0 1.887 63 0.34
37 37 A 0 2 1 0 0 0 2 3 13 0 8 1 0 1 45 8 0 7 1 9 159 4 1 1.860 62 0.23
38 38 A 0 6 0 0 69 0 21 0 0 0 0 4 0 0 0 0 0 0 0 0 155 0 0 0.876 29 0.84
39 39 A 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 93 6 159 0 0 0.293 9 0.92
40 40 A 0 0 0 0 1 99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 159 0 0 0.038 1 1.00
41 41 A 3 73 6 3 10 3 0 0 0 0 0 0 0 3 0 0 0 0 0 0 159 0 0 1.027 34 0.76
42 42 A 0 1 0 0 0 0 0 7 2 0 7 10 0 2 0 0 4 44 2 21 158 0 0 1.696 56 0.49
43 43 A 7 0 7 0 0 0 1 59 1 1 3 4 0 0 0 0 0 0 2 14 139 0 0 1.431 47 0.45
44 44 A 0 0 0 0 0 0 0 17 35 27 10 1 0 0 1 3 0 1 3 1 135 0 0 1.665 55 0.42
45 45 A 6 2 2 2 0 0 1 1 16 14 10 8 0 1 20 15 2 1 1 0 122 0 0 2.277 76 0.17
46 46 A 8 1 1 4 0 0 1 0 40 18 0 7 0 0 0 12 2 2 1 5 118 0 0 1.891 63 0.28
47 47 A 2 0 3 2 0 0 0 2 46 3 4 9 0 0 0 24 1 3 3 0 112 0 0 1.701 56 0.32
48 48 A 2 0 0 1 0 0 0 4 27 21 2 5 0 12 3 18 2 0 2 0 94 0 0 2.018 67 0.25
49 49 A 10 2 0 0 0 0 0 20 41 5 8 8 0 0 0 5 0 1 0 0 86 0 0 1.756 58 0.36
50 50 A 1 0 0 0 0 0 0 6 51 3 21 0 0 0 0 6 9 3 0 0 67 0 0 1.496 49 0.43
51 51 A 13 0 3 2 0 0 0 3 32 2 13 27 0 0 0 0 0 3 2 0 60 0 0 1.799 60 0.33
52 52 A 0 0 0 0 0 0 0 0 63 4 27 0 0 0 0 0 0 0 6 0 48 0 0 0.953 31 0.58
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
154 38 38 1 sYy
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