Complet list of 1x5a hssp file
Complete list of 1x5a.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1X5A
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-12
HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 15-MAY-05 1X5A
COMPND MOL_ID: 1; MOLECULE: EPHRIN TYPE-A RECEPTOR 1; CHAIN: A; FRAGMENT: FIB
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: MUS MUSCULUS; ORGANISM_COMMON: HOUSE M
AUTHOR N.TOCHIO,A.SASAGAWA,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA, RIKEN STRUC
DBREF 1X5A A 8 101 UNP Q60750 EPHA1_MOUSE 446 539
SEQLENGTH 107
NCHAIN 1 chain(s) in 1X5A data set
NALIGN 78
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : G3HL34_CRIGR 0.97 0.99 8 103 415 510 96 0 0 887 G3HL34 Ephrin type-A receptor 1 OS=Cricetulus griseus GN=I79_011419 PE=4 SV=1
2 : EPHA1_MOUSE 1X5A 0.95 0.97 6 105 444 543 100 0 0 977 Q60750 Ephrin type-A receptor 1 OS=Mus musculus GN=Epha1 PE=1 SV=2
3 : Q6IR19_MOUSE 0.95 0.97 6 105 444 543 100 0 0 977 Q6IR19 Eph receptor A1 OS=Mus musculus GN=Epha1 PE=2 SV=1
4 : D3ZDH4_RAT 0.93 0.96 6 105 444 543 100 0 0 977 D3ZDH4 Eph receptor A1 (Predicted) OS=Rattus norvegicus GN=Epha1 PE=4 SV=1
5 : I3M5H9_SPETR 0.91 0.95 6 105 417 516 100 0 0 951 I3M5H9 Uncharacterized protein (Fragment) OS=Spermophilus tridecemlineatus GN=EPHA1 PE=4 SV=1
6 : D2HP53_AILME 0.90 0.95 6 104 393 491 99 0 0 926 D2HP53 Putative uncharacterized protein (Fragment) OS=Ailuropoda melanoleuca GN=PANDA_013528 PE=4 SV=1
7 : G5C2M3_HETGA 0.90 0.97 6 106 413 513 101 0 0 921 G5C2M3 Ephrin type-A receptor 1 OS=Heterocephalus glaber GN=GW7_09040 PE=4 SV=1
8 : L9JAL2_TUPCH 0.89 0.94 9 105 458 554 97 0 0 1023 L9JAL2 Ephrin type-A receptor 1 OS=Tupaia chinensis GN=TREES_T100001116 PE=4 SV=1
9 : M1EPI1_MUSPF 0.89 0.95 6 105 332 431 100 0 0 849 M1EPI1 EPH receptor A1 (Fragment) OS=Mustela putorius furo PE=2 SV=1
10 : M3W7F9_FELCA 0.89 0.95 6 105 445 544 100 0 0 978 M3W7F9 Uncharacterized protein (Fragment) OS=Felis catus GN=EPHA1 PE=4 SV=1
11 : M3Y6K6_MUSPF 0.89 0.95 6 105 443 542 100 0 0 976 M3Y6K6 Uncharacterized protein OS=Mustela putorius furo GN=EPHA1 PE=4 SV=1
12 : U6DLV0_NEOVI 0.89 0.95 6 105 9 108 100 0 0 542 U6DLV0 Ephrin type-A receptor 1 (Fragment) OS=Neovison vison GN=EPHA1 PE=2 SV=1
13 : E2R6A6_CANFA 0.88 0.95 6 105 443 542 100 0 0 976 E2R6A6 Uncharacterized protein OS=Canis familiaris GN=EPHA1 PE=4 SV=1
14 : F6WYP6_HORSE 0.88 0.95 6 105 416 515 100 0 0 949 F6WYP6 Uncharacterized protein (Fragment) OS=Equus caballus GN=EPHA1 PE=4 SV=1
15 : H0VRN3_CAVPO 0.88 0.94 3 106 442 545 104 0 0 979 H0VRN3 Uncharacterized protein OS=Cavia porcellus GN=EPHA1 PE=4 SV=1
16 : L5KPP9_PTEAL 0.88 0.97 9 105 438 534 97 0 0 703 L5KPP9 Ephrin type-A receptor 1 OS=Pteropus alecto GN=PAL_GLEAN10019007 PE=4 SV=1
17 : F7EBG2_MACMU 0.87 0.94 6 105 445 544 100 0 0 978 F7EBG2 Uncharacterized protein OS=Macaca mulatta GN=EPHA1 PE=4 SV=1
18 : G3QCY0_GORGO 0.87 0.94 6 105 443 542 100 0 0 976 G3QCY0 Uncharacterized protein OS=Gorilla gorilla gorilla GN=101126195 PE=4 SV=1
19 : G7P1I2_MACFA 0.87 0.94 6 105 427 526 100 0 0 930 G7P1I2 Putative uncharacterized protein OS=Macaca fascicularis GN=EGM_13060 PE=4 SV=1
20 : H0X9F1_OTOGA 0.87 0.95 6 105 445 544 100 0 0 977 H0X9F1 Uncharacterized protein OS=Otolemur garnettii GN=EPHA1 PE=4 SV=1
21 : H2PNW1_PONAB 0.87 0.94 6 105 360 459 100 0 0 893 H2PNW1 Uncharacterized protein OS=Pongo abelii GN=EPHA1 PE=4 SV=1
22 : S9XZG3_9CETA 0.87 0.93 6 104 418 516 99 0 0 929 S9XZG3 Ephrin type-A receptor 1 OS=Camelus ferus GN=CB1_000804076 PE=4 SV=1
23 : G1QSZ6_NOMLE 0.86 0.94 6 105 443 542 100 0 0 975 G1QSZ6 Uncharacterized protein OS=Nomascus leucogenys GN=EPHA1 PE=4 SV=1
24 : G1T0K8_RABIT 0.86 0.93 2 105 439 542 104 0 0 976 G1T0K8 Uncharacterized protein (Fragment) OS=Oryctolagus cuniculus GN=EPHA1 PE=4 SV=1
25 : G3RNZ5_GORGO 0.86 0.94 6 105 446 545 100 0 0 979 G3RNZ5 Uncharacterized protein OS=Gorilla gorilla gorilla GN=101126195 PE=4 SV=1
26 : G7MN62_MACMU 0.86 0.94 6 105 427 526 100 0 0 930 G7MN62 Putative uncharacterized protein OS=Macaca mulatta GN=EGK_14278 PE=4 SV=1
27 : F1SRW1_PIG 0.85 0.92 2 104 441 543 103 0 0 982 F1SRW1 Uncharacterized protein OS=Sus scrofa GN=EPHA1 PE=4 SV=1
28 : S7MQA8_MYOBR 0.85 0.95 6 103 424 521 98 0 0 906 S7MQA8 Ephrin type-A receptor 1 OS=Myotis brandtii GN=D623_10026183 PE=4 SV=1
29 : A8K2T6_HUMAN 0.84 0.92 2 105 439 542 104 0 0 976 A8K2T6 cDNA FLJ76013, highly similar to Homo sapiens EPH receptor A1 (EPHA1), mRNA OS=Homo sapiens PE=2 SV=1
30 : EPHA1_HUMAN 3KKA 0.84 0.92 2 105 439 542 104 0 0 976 P21709 Ephrin type-A receptor 1 OS=Homo sapiens GN=EPHA1 PE=1 SV=4
31 : H2QVJ8_PANTR 0.84 0.92 2 105 439 542 104 0 0 976 H2QVJ8 Uncharacterized protein OS=Pan troglodytes GN=EPHA1 PE=4 SV=1
32 : F1MFH7_BOVIN 0.83 0.91 2 104 442 544 103 0 0 982 F1MFH7 Uncharacterized protein OS=Bos taurus GN=EPHA1 PE=4 SV=2
33 : W5Q9P6_SHEEP 0.83 0.92 2 104 396 498 103 0 0 937 W5Q9P6 Uncharacterized protein (Fragment) OS=Ovis aries GN=EPHA1 PE=4 SV=1
34 : F7I7A7_CALJA 0.82 0.90 2 105 439 542 104 0 0 976 F7I7A7 Uncharacterized protein OS=Callithrix jacchus GN=EPHA1 PE=4 SV=1
35 : G1LJW7_AILME 0.82 0.92 1 104 434 537 104 0 0 972 G1LJW7 Uncharacterized protein OS=Ailuropoda melanoleuca GN=EPHA1 PE=4 SV=1
36 : G1PRK9_MYOLU 0.82 0.90 2 105 435 538 104 0 0 977 G1PRK9 Uncharacterized protein OS=Myotis lucifugus GN=EPHA1 PE=4 SV=1
37 : U3B5E4_CALJA 0.82 0.90 2 105 439 542 104 0 0 976 U3B5E4 Ephrin type-A receptor 1 OS=Callithrix jacchus GN=EPHA1 PE=2 SV=1
38 : L5LNF3_MYODS 0.80 0.89 2 105 381 484 104 0 0 930 L5LNF3 Ephrin type-A receptor 1 OS=Myotis davidii GN=MDA_GLEAN10005327 PE=4 SV=1
39 : L8J285_9CETA 0.78 0.88 1 104 413 516 104 0 0 954 L8J285 Ephrin type-A receptor 1 (Fragment) OS=Bos mutus GN=M91_03713 PE=4 SV=1
40 : G3VXD9_SARHA 0.77 0.88 2 105 441 544 104 0 0 979 G3VXD9 Uncharacterized protein OS=Sarcophilus harrisii GN=EPHA1 PE=4 SV=1
41 : K9INJ6_DESRO 0.76 0.87 2 104 436 538 103 0 0 973 K9INJ6 Putative ephrin type-a receptor 1 OS=Desmodus rotundus PE=2 SV=1
42 : F7APP4_MONDO 0.75 0.87 2 105 442 545 104 0 0 980 F7APP4 Uncharacterized protein OS=Monodelphis domestica GN=EPHA1 PE=4 SV=1
43 : G3UJ23_LOXAF 0.75 0.90 2 105 440 543 104 0 0 976 G3UJ23 Uncharacterized protein OS=Loxodonta africana GN=EPHA1 PE=4 SV=1
44 : G1MYL2_MELGA 0.37 0.63 3 101 432 532 101 1 2 969 G1MYL2 Uncharacterized protein OS=Meleagris gallopavo GN=EPHA1 PE=4 SV=2
45 : G1NN07_MELGA 0.37 0.63 3 101 431 531 101 1 2 968 G1NN07 Uncharacterized protein (Fragment) OS=Meleagris gallopavo GN=EPHA1 PE=4 SV=1
46 : H2LEN5_ORYLA 0.37 0.56 16 100 442 535 94 3 9 950 H2LEN5 Uncharacterized protein (Fragment) OS=Oryzias latipes PE=4 SV=1
47 : F1NB88_CHICK 0.36 0.63 3 103 432 534 103 1 2 969 F1NB88 Uncharacterized protein OS=Gallus gallus GN=EPHA1 PE=4 SV=2
48 : H0ZSP2_TAEGU 0.36 0.63 3 101 419 519 101 1 2 957 H0ZSP2 Uncharacterized protein (Fragment) OS=Taeniopygia guttata GN=EPHA1 PE=4 SV=1
49 : Q98TD0_CHICK 0.36 0.63 3 103 432 534 103 1 2 969 Q98TD0 Tyrosine kinase receptor EphA9 OS=Gallus gallus GN=ephA9 PE=2 SV=1
50 : R0LT46_ANAPL 0.36 0.63 3 101 383 483 101 1 2 926 R0LT46 Ephrin type-A receptor 1 (Fragment) OS=Anas platyrhynchos GN=Anapl_10415 PE=4 SV=1
51 : U3I500_ANAPL 0.36 0.63 3 101 434 534 101 1 2 971 U3I500 Uncharacterized protein OS=Anas platyrhynchos GN=EPHA1 PE=4 SV=1
52 : U3JPR9_FICAL 0.36 0.63 3 101 434 534 101 1 2 971 U3JPR9 Uncharacterized protein (Fragment) OS=Ficedula albicollis GN=EPHA1 PE=4 SV=1
53 : V8NVX2_OPHHA 0.36 0.62 3 100 378 477 100 1 2 690 V8NVX2 Ephrin type-A receptor 2 (Fragment) OS=Ophiophagus hannah GN=EPHA2 PE=4 SV=1
54 : F6Y6T3_ORNAN 0.33 0.58 16 100 862 949 88 1 3 1843 F6Y6T3 Uncharacterized protein OS=Ornithorhynchus anatinus GN=PTPRF PE=4 SV=2
55 : H9GCN5_ANOCA 0.33 0.59 3 100 436 535 100 1 2 972 H9GCN5 Uncharacterized protein OS=Anolis carolinensis GN=EPHA1 PE=4 SV=2
56 : M7B241_CHEMY 0.33 0.61 3 107 596 702 107 1 2 1109 M7B241 Ephrin type-A receptor 1 OS=Chelonia mydas GN=UY3_13370 PE=4 SV=1
57 : B7ZS86_XENLA 0.32 0.50 19 100 913 1000 88 1 6 1897 B7ZS86 XPTP-D protein OS=Xenopus laevis GN=XPTP-D PE=2 SV=1
58 : F6SAK6_XENTR 0.32 0.50 19 100 928 1015 88 1 6 1916 F6SAK6 Uncharacterized protein (Fragment) OS=Xenopus tropicalis GN=ptprd PE=4 SV=1
59 : G1TL18_RABIT 0.32 0.57 16 100 913 1000 88 1 3 1897 G1TL18 Uncharacterized protein OS=Oryctolagus cuniculus GN=PTPRF PE=4 SV=2
60 : H3B075_LATCH 0.32 0.55 16 100 706 793 88 1 3 1693 H3B075 Uncharacterized protein (Fragment) OS=Latimeria chalumnae PE=4 SV=1
61 : K7FLC7_PELSI 0.32 0.60 3 100 435 534 100 1 2 980 K7FLC7 Uncharacterized protein OS=Pelodiscus sinensis GN=EPHA1 PE=4 SV=1
62 : M3WLZ3_FELCA 0.32 0.59 16 100 922 1009 88 1 3 1907 M3WLZ3 Uncharacterized protein OS=Felis catus GN=PTPRF PE=4 SV=1
63 : Q9IAJ1_XENLA 0.32 0.50 19 100 912 999 88 1 6 1896 Q9IAJ1 Receptor protein tyrosine phosphatase delta OS=Xenopus laevis GN=ptprd PE=2 SV=1
64 : D2HSQ6_AILME 0.31 0.59 16 100 927 1014 88 1 3 1913 D2HSQ6 Uncharacterized protein (Fragment) OS=Ailuropoda melanoleuca GN=PTPRF PE=4 SV=1
65 : E2RE80_CANFA 0.31 0.59 16 100 913 1000 88 1 3 1897 E2RE80 Uncharacterized protein OS=Canis familiaris GN=PTPRF PE=4 SV=2
66 : E2RE81_CANFA 0.31 0.59 16 100 922 1009 88 1 3 1906 E2RE81 Uncharacterized protein OS=Canis familiaris GN=PTPRF PE=4 SV=2
67 : F7C1W3_HORSE 0.31 0.59 16 100 932 1019 88 1 3 1916 F7C1W3 Uncharacterized protein (Fragment) OS=Equus caballus GN=PTPRF PE=4 SV=1
68 : F7DNP8_HORSE 0.31 0.59 16 100 922 1009 88 1 3 1906 F7DNP8 Uncharacterized protein OS=Equus caballus GN=PTPRF PE=4 SV=1
69 : G1L3U9_AILME 0.31 0.59 16 100 914 1001 88 1 3 1905 G1L3U9 Uncharacterized protein (Fragment) OS=Ailuropoda melanoleuca GN=PTPRF PE=4 SV=1
70 : G1PTQ5_MYOLU 0.31 0.57 16 100 924 1011 88 1 3 1916 G1PTQ5 Uncharacterized protein OS=Myotis lucifugus GN=PTPRF PE=4 SV=1
71 : G5AQF6_HETGA 0.31 0.57 16 100 923 1010 88 1 3 1908 G5AQF6 Receptor-type tyrosine-protein phosphatase F OS=Heterocephalus glaber GN=GW7_04344 PE=4 SV=1
72 : L5KQB0_PTEAL 0.31 0.57 16 100 922 1009 88 1 3 1922 L5KQB0 Receptor-type tyrosine-protein phosphatase F OS=Pteropus alecto GN=PAL_GLEAN10003113 PE=4 SV=1
73 : M3YQF3_MUSPF 0.31 0.54 16 100 922 1009 90 2 7 1906 M3YQF3 Uncharacterized protein OS=Mustela putorius furo GN=PTPRF PE=4 SV=1
74 : S7MU60_MYOBR 0.31 0.57 16 100 928 1015 88 1 3 1914 S7MU60 Receptor-type tyrosine-protein phosphatase F OS=Myotis brandtii GN=D623_10008283 PE=4 SV=1
75 : T0MGH1_9CETA 0.31 0.58 16 100 874 961 88 1 3 2491 T0MGH1 Receptor-type tyrosine-protein phosphatase F isoform 1 (Fragment) OS=Camelus ferus GN=CB1_000365077 PE=4 SV=1
76 : W5LCG5_ASTMX 0.31 0.50 16 100 443 536 94 3 9 987 W5LCG5 Uncharacterized protein OS=Astyanax mexicanus PE=4 SV=1
77 : G3HFG6_CRIGR 0.30 0.55 17 100 854 940 87 1 3 1838 G3HFG6 Receptor-type tyrosine-protein phosphatase F OS=Cricetulus griseus GN=I79_009306 PE=4 SV=1
78 : H0UZZ7_CAVPO 0.30 0.51 18 98 444 526 83 1 2 976 H0UZZ7 Uncharacterized protein (Fragment) OS=Cavia porcellus GN=EPHA2 PE=4 SV=1
## ALIGNMENTS 1 - 70
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A G 0 0 138 3 43 A A
2 2 A S - 0 0 118 18 7 S S SSSSSSGSSSSSSSS
3 3 A S > + 0 0 83 31 34 I I I IIIIIIAVIVALVLVVV VVVVVVV VV V
4 4 A G T 5 + 0 0 58 31 59 N G S SSSNNSSHSHSSSSNAA ASAAASS TS S
5 5 A S T > 5S- 0 0 109 31 50 M M M MMMMMMLMMMLILIMVV VVVVVVV VV V
6 6 A S T 3 5S+ 0 0 123 53 6 GGGGGG GGGGGGG GGGGGGGGGGGGGGGGGGSGGGSGGGGGG GGGGGGG GG G
7 7 A G T 3 5 + 0 0 64 53 38 HHQHHQ PHPPHHQ HHHPHHHHPHHHHHHSSHIHHHIHHHHHH HHHHHHH YH H
8 8 A A < < + 0 0 55 54 23 AAAAAAA AAAAAAA AAAPAAAAPAATAAAAAASTATNATAAAA AAAAAAA AA I
9 9 A E - 0 0 138 56 62 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEMEEEMEEEEAA AAAAAAA DA A
10 10 A S - 0 0 115 56 53 SSSSSSSPSSSSSSSSPSPSSPSSSPSSSSSSSSGSSSGSSPPPP PPPPPPP PP P
11 11 A L - 0 0 64 56 52 LLLLLLPLLLLLLLLLLLLLLLLLLLLPLLLLLLHPLASLPLLVV VVVVVVV IV V
12 12 A S - 0 0 81 56 68 SSSSSSSSSSSSSSSSSSSSSSSSSSSPSSSSSSAPSPASASATT TTTTTTA IT T
13 13 A G S S+ 0 0 27 56 65 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGVV VVVVVVV VV V
14 14 A L + 0 0 6 56 93 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLSS SSSSSST TS S
15 15 A S - 0 0 71 56 82 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSLSSQQ QQQHHQN NH H
16 16 A L - 0 0 7 74 10 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLFFIFFFFFFVLIL LLLL LLLLLLL
17 17 A K - 0 0 100 75 61 RKKKRRKTRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRSRSQIIHIIIIIIIRNT RRTR RRRRRRH
18 18 A L E +A 28 0A 58 76 29 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLVLL VALV VVVVVVV
19 19 A V E + 0 0A 53 79 60 VVVVVVLVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVTTETTTTTTDVDTDDIVTVDIIIIIII
20 20 A K E -A 27 0A 93 79 80 KKKKKKKKKKKKKKKRKKKKKKKKKKKRKKKKKNKRNRKKKKKQQKQQQQQQKGSQSSGGQGSGGGGGGG
21 21 A K E +A 26 0A 110 79 86 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRRSRRRRRRRLQRTTLLRLTLLLLLLL
22 22 A E E > -A 25 0A 84 79 68 EEEEEEEEEEEEEEEEEEEEEAEEEEAEEEEAAEEEEEAGEGADDGDDDDDDNTNDSSTTDTSTTTTTTT
23 23 A P T 3 S+ 0 0 30 79 74 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPDDPDDDDDDDTEDSSTADTSTTTIITT
24 24 A R T 3 S+ 0 0 185 79 73 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRSSTSSSSSSSSSSTTSSSSTSSSSSSS
25 25 A Q E < -AB 22 67A 56 79 88 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQRQSSSSSSSSSSTSSSSTTSTSTTTTTTT
26 26 A L E -AB 21 66A 2 79 56 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLTLLVVTTLTVTTTTTTT
27 27 A E E +AB 20 65A 49 79 51 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEESSSSSSSSSSESSLLEQSELEEEEEEE
28 28 A L E -AB 18 64A 1 79 23 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLVVLVVVVVVVVVVIILLVLILLLLLLL
29 29 A T E - B 0 63A 49 79 45 TTTTTTTTTTTTTTTSTTTTTTTTTTTTTTTTTTTTTTTSTSASSSSSSSSSTTTSTTATSTTTTTAATA
30 30 A W + 0 0 6 79 0 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
31 31 A A + 0 0 86 79 82 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAEASLLSLLLLLLLDLPQQDEPDQDDDEEDD
32 32 A G + 0 0 54 79 71 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAALAAAAAAPPPAHHPPAPHPPPPPPP
33 33 A S - 0 0 104 79 55 SSSSSSSSSSSSSSSGSSSSSSSSSSSSSSSSSSSSSSSSSSAPPSPPPPPPSPTPPPPPPPPPPPPPPP
34 34 A R - 0 0 209 79 77 RRRRRRQRRRRRRWRWRRRRRRRWRRRRRRRRRRRRRRRRQQQRRRRRRRRRRMRRNNVVRVNVVVVVVV
35 35 A P S S+ 0 0 115 79 89 PPPLPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPQQRQQQQQQLLHHLLLLPLLLLLLLLL
36 36 A R S S+ 0 0 245 79 75 RRRQRRRRRRRRRRRRRRRRRRQRRRRRRRRRRRRRRRRRRRRRRPRRRRRRRARREEASRAEAAAAAAA
37 37 A N - 0 0 105 79 61 NNNNSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSSSSSSSESSEEEESEEEEEEEEE
38 38 A P - 0 0 101 79 67 PPPPLPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPRRARRRQQRQRHRRRRRRRRRRRRRRQ
39 39 A G S S+ 0 0 71 79 72 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGVGGVGGGSGGTTHTTTTTTSNVSNNNNSNNNNNNNNN
40 40 A G S S- 0 0 63 79 40 GGGGGGGGGGGGAGGGGAGGAGAGAGGGAAAGGGGGGGGVGVGSSISSSAASSGPSGGGGSGGGGGGGGG
41 41 A N - 0 0 161 79 92 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNVVSVVVVVVVRIVLLRKVRLHRRHHHH
42 42 A L - 0 0 76 79 72 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEHEEEEEENISQLLIIQILIIIIIII
43 43 A S E -C 82 0B 26 79 86 SSSSSSSSSSSSSSSSSSSSSSSTSSSTTTTSSSSTSTSSTSTYYRYYYYYYYTYYTTTVYTTTTTTTTT
44 44 A Y E -CD 81 59B 40 79 97 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYEEYEEEEEEENEEKKNLENKNNNNNNS
45 45 A E E -CD 80 58B 46 79 104 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEVVEVVVVVVVYVVYYYYVYYYYYYYYY
46 46 A L E -CD 79 57B 0 79 71 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLMMLMMMMMMLTMMTTTTMSTSSSTTST
47 47 A H E -CD 78 56B 29 79 94 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHFFMFFFFFFYVYYLLVVYVLVVVVVVV
48 48 A V E -CD 77 55B 0 79 46 VVVVVVVVVVVVVVVVVVVVVIVVVVVVVVVVVVVVVVVVVVVFFYFFFFFFFVFFMMVVFVMVVVVVVV
49 49 A L E -CD 76 54B 48 79 92 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLQLLQLLLLLLEErEEEEEEEyEEyyyyEyyyyyyyyy
50 50 A N - 0 0 36 79 43 NNNNNNNNNNNNNNHNNNNNNNNNNNNNNNNNNNNNNNNNNNNKKeKKKKKKKdKKhhnnKnhnnnnnnn
51 51 A Q S S- 0 0 170 79 84 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQGGRGGGGGGGSGGYYSSGSYSSSSSSS
52 52 A D S S+ 0 0 155 79 46 DDDDDDDDDDDDDDDDDDDDDDDDDDNDDDDDDDDDDGDEDKDEEDEEEEEEEQEEPPQKEQPQQQQQQQ
53 53 A E - 0 0 124 79 54 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEKEAEEEEEEVEEEEEEEQEDIIQQDQIQQQQQQQ
54 54 A E E +D 49 0B 109 79 39 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAATAAAAAAKDKAEEEEAEEEEEEEEE
55 55 A W E -D 48 0B 68 79 83 WWWWWRWRRRRRRRWRRRRRRRRRRRRRRRRRRWRWWWGRWRRRRTRRRRRRHLHHVVLLHLVLLLLLLL
56 56 A H E -D 47 0B 115 79 76 HHHHHHHHHHHHHHYHYYYHYHYHYYHYYYYYYHHYHYYYHYHYYYYYYYYYYHYYPPQAYQPQQQQQQQ
57 57 A Q E -D 46 0B 71 79 80 QQQQQQQQQQQQQQQQQQQEQQQQQQQQQQQQQQQQQQQQRQQttttttttttNttIINNtNINNNNNNN
58 58 A M E -D 45 0B 100 78 82 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMLMMLMMMMMThhihhhhhhhVhqVVVTqIVIVVVVIT
59 59 A V E -D 44 0B 14 78 71 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVLLLLLLLLLLTLFPPTTFTPTTTTTTT
60 60 A L S S+ 0 0 130 79 83 LLLLLLLPLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLPPPLLLDLLLLLLQAKHAAATHAAAAAAAAA
61 61 A E S S- 0 0 78 79 31 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEEEKDEEDDDEEDDHDDNNHD
62 62 A P S S+ 0 0 53 79 56 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPSPPPPPPPTPPTTTTPTTTTTTTTT
63 63 A R E -B 29 0A 150 79 69 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRNNFNNNNNNQRKNTTRHNHTHHHHHHR
64 64 A V E -B 28 0A 4 79 26 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVAVVVVVVVVVVVLVVVVLIVLVLLLLLLL
65 65 A L E -B 27 0A 67 79 77 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLSLLLTTQTTTTTTTTTTTTTTTVTTMMTTTT
66 66 A L E +B 26 0A 7 79 3 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLILLLLLLLLLLLLLLLLLLLLLLLL
67 67 A T E +B 25 0A 79 79 57 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTRTTTRATARTTSTKSTSSSSSSS
68 68 A K S S+ 0 0 195 79 57 KKKKKEKEEEEEEEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEDDDDDDDDDNNNDGGGNDGGGGGGGGG
69 69 A L - 0 0 6 79 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
70 70 A Q - 0 0 124 79 53 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQTQQQQQQQRQQKKTKQKKKKKKKKK
71 71 A P S S+ 0 0 41 79 0 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
72 72 A D S S+ 0 0 103 79 2 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
73 73 A T - 0 0 23 79 0 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
74 74 A T E - E 0 97B 46 79 22 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATAAAATSATTTTATTTTTTTTT
75 75 A Y E - E 0 96B 8 79 0 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
76 76 A I E -CE 49 95B 39 79 83 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIVIIVIIVTVILLILLLLLLMDLLDDDDLDDDDDDDDD
77 77 A V E +CE 48 94B 2 79 30 VVVVVVVVVVVVVVVVVVVVVVVVVVVIVVVVVVVIVIVVVVVLLFLLLLLLLILLVVVILIVIIIVVII
78 78 A R E -C 47 0B 71 79 29 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRKRRRRRRRKRRKKKKRKKKKKKKKK
79 79 A V E -C 46 0B 0 79 4 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVLLVVVVLVVVVVVV
80 80 A R E -C 45 0B 39 79 8 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRQRRRRRRRRRRRRRRRRRRRRRRRR
81 81 A T E -C 44 0B 21 79 84 TTTTMMTMMMMMMMTTMMMMMMMMMMMMMMMMMMMMMMMIMTMSSASSSSSSSASSAAAASAAAAAAAAA
82 82 A L E -C 43 0B 43 79 82 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLVVLLLLLVLLLVIILIIIIIIIRVIHHRHIRHRRRRRRH
83 83 A T - 0 0 49 79 2 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTSTTTTTTTTTTTTTTTTTTTTTTTT
84 84 A P S S+ 0 0 126 79 47 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPSPPPPPPPPPPNPPSSSNPSSSSSSSSS
85 85 A L S S- 0 0 164 79 81 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLQLQLLELLLLLLLKSLKKKKLKKKKKKKKK
86 86 A G S S- 0 0 59 79 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGgGGGGGGGGGGGGGGGGGGGGGGGG
87 87 A P - 0 0 64 79 40 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPpPPPPPPPPEPPPAAIAPAAAAAAA
88 88 A G - 0 0 15 79 2 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
89 89 A P - 0 0 73 79 7 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPSPPPPPPPPPPPPPPPPPPPPPPPP
90 90 A F - 0 0 73 79 26 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFYFYYFYYYYYYYLFFFFLLYLFLLLLLLL
91 91 A S - 0 0 3 79 0 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
92 92 A P - 0 0 78 79 36 PPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPAAPPPPPAPPPPQQTQPQQQPQPQQPPPPQPPPPPPPPP
93 93 A D - 0 0 122 79 60 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDGDDEEEEEEEEEESEESSSSESSSSSSSSS
94 94 A H E -E 77 0B 36 79 84 HHHHHHHHHHHHHQHHHHHHHHHHHHHHHHHHHHHHHHHHHHHQQHQQQQQQKIQQVVIVQIVIIIIIII
95 95 A E E +E 76 0B 146 79 31 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEQEEQQQQEQQQQQQQQQ
96 96 A F E -E 75 0B 25 79 62 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFSFFFFSSFSFSSSSSSS
97 97 A R E -E 74 0B 144 79 8 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRHRRRRRRRRRRRRRRRRRRRRRRRR
98 98 A T - 0 0 3 79 0 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
99 99 A S - 0 0 26 78 90 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSLLSLLLLLLLVLLLLMVLMLMMMMMMM
100 100 A P - 0 0 88 78 2 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPP
101 101 A P - 0 0 69 53 0 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP PPPPPP P
102 102 A S S S+ 0 0 138 47 61 EVVVVVPVVVVVVVPVVVVVVVVVVVVGVVVVVVVVVVVVVLA G G D
103 103 A G - 0 0 55 47 56 DSSSSSASSSSSSSASSSSSSPSSSSSGSSSSSSSSSPSSSFS T T T
104 104 A P - 0 0 138 43 48 RRRRRSRRRRRRRSRRRRRRRRRRRR RRRRSRRRRRRKRKR G
105 105 A S - 0 0 112 35 46 SSSS RGGGGGGSRGGGGGG GGGG GGG G SGG G GG A
106 106 A S 0 0 124 4 64 S S P
107 107 A G 0 0 130 2 59 S
## ALIGNMENTS 71 - 78
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....8....:....9....:....0....:....1....:....2....:....3....:....4
1 1 A G 0 0 138 3 43
2 2 A S - 0 0 118 18 7
3 3 A S > + 0 0 83 31 34
4 4 A G T 5 + 0 0 58 31 59
5 5 A S T > 5S- 0 0 109 31 50
6 6 A S T 3 5S+ 0 0 123 53 6
7 7 A G T 3 5 + 0 0 64 53 38
8 8 A A < < + 0 0 55 54 23
9 9 A E - 0 0 138 56 62
10 10 A S - 0 0 115 56 53
11 11 A L - 0 0 64 56 52
12 12 A S - 0 0 81 56 68
13 13 A G S S+ 0 0 27 56 65
14 14 A L + 0 0 6 56 93
15 15 A S - 0 0 71 56 82
16 16 A L - 0 0 7 74 10 LLLLLL
17 17 A K - 0 0 100 75 61 RRRHRRR
18 18 A L E +A 28 0A 58 76 29 VVVVVVVL
19 19 A V E + 0 0A 53 79 60 TIIIIVIE
20 20 A K E -A 27 0A 93 79 80 GGGGGDGG
21 21 A K E +A 26 0A 110 79 86 LLLLLRLR
22 22 A E E > -A 25 0A 84 79 68 TTTTTTTT
23 23 A P T 3 S+ 0 0 30 79 74 TTTTTPTT
24 24 A R T 3 S+ 0 0 185 79 73 SSSSSSST
25 25 A Q E < -AB 22 67A 56 79 88 TTTSTSTS
26 26 A L E -AB 21 66A 2 79 56 TMTTTLTL
27 27 A E E +AB 20 65A 49 79 51 EEEEESET
28 28 A L E -AB 18 64A 1 79 23 LLLLLLLV
29 29 A T E - B 0 63A 49 79 45 ATTASSST
30 30 A W + 0 0 6 79 0 WWWWWWWW
31 31 A A + 0 0 86 79 82 DDDDDADS
32 32 A G + 0 0 54 79 71 PPPPPVPI
33 33 A S - 0 0 104 79 55 PPPPPDPP
34 34 A R - 0 0 209 79 77 VVVVVHVV
35 35 A P S S+ 0 0 115 79 89 LLLLLRLP
36 36 A R S S+ 0 0 245 79 75 AAAAATAQ
37 37 A N - 0 0 105 79 61 EEEEELER
38 38 A P - 0 0 101 79 67 RRRQRSRS
39 39 A G S S+ 0 0 71 79 72 NNNNNRNR
40 40 A G S S- 0 0 63 79 40 GGGGGQGV
41 41 A N - 0 0 161 79 92 HRRHRPRW
42 42 A L - 0 0 76 79 72 IIIIIPIK
43 43 A S E -C 82 0B 26 79 86 ATTTTHTY
44 44 A Y E -CD 81 59B 40 79 97 NNNSNFNE
45 45 A E E -CD 80 58B 46 79 104 YYYYYEYV
46 46 A L E -CD 79 57B 0 79 71 TTSTTLTT
47 47 A H E -CD 78 56B 29 79 94 VMVVVMVY
48 48 A V E -CD 77 55B 0 79 46 VVVVVYVH
49 49 A L E -CD 76 54B 48 79 92 yyfyyryK
50 50 A N - 0 0 36 79 43 nnqnnenK
51 51 A Q S S- 0 0 170 79 84 SSQSSQSG
52 52 A D S S+ 0 0 155 79 46 QQEQQDQD
53 53 A E - 0 0 124 79 54 QQLQQVHA
54 54 A E E +D 49 0B 109 79 39 EEQEETEN
55 55 A W E -D 48 0B 68 79 83 LMNLLTLS
56 56 A H E -D 47 0B 115 79 76 QQFQQYHY
57 57 A Q E -D 46 0B 71 79 80 DNTNNtNn
58 58 A M E -D 45 0B 100 78 82 VT.TIkFr
59 59 A V E -D 44 0B 14 78 71 TT.TTLTT
60 60 A L S S+ 0 0 130 79 83 AAAAAEDE
61 61 A E S S- 0 0 78 79 31 DDDDEKDG
62 62 A P S S+ 0 0 53 79 56 TTTTTDIF
63 63 A R E -B 29 0A 150 79 69 HLRRHSHS
64 64 A V E -B 28 0A 4 79 26 FLLLLVLV
65 65 A L E -B 27 0A 67 79 77 TTTTTQTT
66 66 A L E +B 26 0A 7 79 3 LLLLLILL
67 67 A T E +B 25 0A 79 79 57 SSSSSNFE
68 68 A K S S+ 0 0 195 79 57 GGGGGDGN
69 69 A L - 0 0 6 79 0 LLLLLLLL
70 70 A Q - 0 0 124 79 53 KKKKRLKA
71 71 A P S S+ 0 0 41 79 0 PPPPPPPP
72 72 A D S S+ 0 0 103 79 2 DDDDDGDD
73 73 A T - 0 0 23 79 0 TTTTTTTT
74 74 A T E - E 0 97B 46 79 22 TTTTTKTT
75 75 A Y E - E 0 96B 8 79 0 YYYYYYYY
76 76 A I E -CE 49 95B 39 79 83 DDDDDVDL
77 77 A V E +CE 48 94B 2 79 30 VIIIIFIV
78 78 A R E -C 47 0B 71 79 29 KKRKKRKQ
79 79 A V E -C 46 0B 0 79 4 VVVVVVVV
80 80 A R E -C 45 0B 39 79 8 RRRRRQRQ
81 81 A T E -C 44 0B 21 79 84 AAAAAAAA
82 82 A L E -C 43 0B 43 79 82 YRWHRLHL
83 83 A T - 0 0 49 79 2 TTTTTTTT
84 84 A P S S+ 0 0 126 79 47 SSSSSPSQ
85 85 A L S S- 0 0 164 79 81 KKKKKEKE
86 86 A G S S- 0 0 59 79 0 GGGGGgGG
87 87 A P - 0 0 64 79 40 AAAAApAQ
88 88 A G - 0 0 15 79 2 GGGGGSGG
89 89 A P - 0 0 73 79 7 PPPPPSPA
90 90 A F - 0 0 73 79 26 LLLLLHLG
91 91 A S - 0 0 3 79 0 SSSSSSSS
92 92 A P - 0 0 78 79 36 PPPPPAPK
93 93 A D - 0 0 122 79 60 SSSSSESE
94 94 A H E -E 77 0B 36 79 84 IIIIIHIH
95 95 A E E +E 76 0B 146 79 31 QQQQQEQE
96 96 A F E -E 75 0B 25 79 62 SSSSSFSF
97 97 A R E -E 74 0B 144 79 8 RRRRRERQ
98 98 A T - 0 0 3 79 0 TTTTTTTT
99 99 A S - 0 0 26 78 90 MMMMMLM
100 100 A P - 0 0 88 78 2 PPPPPPP
101 101 A P - 0 0 69 53 0
102 102 A S S S+ 0 0 138 47 61
103 103 A G - 0 0 55 47 56
104 104 A P - 0 0 138 43 48
105 105 A S - 0 0 112 35 46
106 106 A S 0 0 124 4 64
107 107 A G 0 0 130 2 59
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 33 67 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0.637 21 0.56
2 2 A 0 0 0 0 0 0 0 6 0 0 94 0 0 0 0 0 0 0 0 0 18 0 0 0.215 7 0.93
3 3 A 52 6 32 0 0 0 0 0 6 0 3 0 0 0 0 0 0 0 0 0 31 0 0 1.171 39 0.65
4 4 A 0 0 0 0 0 0 0 6 19 0 52 3 0 6 0 0 0 0 13 0 31 0 0 1.388 46 0.41
5 5 A 39 10 6 42 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 31 0 0 1.245 41 0.50
6 6 A 0 0 0 0 0 0 0 94 0 0 6 0 0 0 0 0 0 0 0 0 53 0 0 0.218 7 0.94
7 7 A 0 0 4 0 0 0 2 2 0 9 4 0 0 74 0 0 6 0 0 0 53 0 0 1.008 33 0.61
8 8 A 0 0 2 0 0 0 0 0 83 4 2 7 0 0 0 0 0 0 2 0 54 0 0 0.688 22 0.76
9 9 A 0 0 0 4 0 0 0 0 20 0 0 0 0 0 0 0 0 75 0 2 56 0 0 0.726 24 0.38
10 10 A 0 0 0 0 0 0 0 4 0 34 63 0 0 0 0 0 0 0 0 0 56 0 0 0.779 26 0.47
11 11 A 20 66 2 0 0 0 0 0 2 7 2 0 0 2 0 0 0 0 0 0 56 0 0 1.070 35 0.48
12 12 A 0 0 2 0 0 0 0 0 9 5 66 18 0 0 0 0 0 0 0 0 56 0 0 1.026 34 0.31
13 13 A 21 0 0 0 0 0 0 79 0 0 0 0 0 0 0 0 0 0 0 0 56 0 0 0.520 17 0.35
14 14 A 0 79 0 0 0 0 0 0 0 0 18 4 0 0 0 0 0 0 0 0 56 0 0 0.616 20 0.06
15 15 A 0 2 0 0 0 0 0 0 0 0 77 0 0 7 0 0 11 0 4 0 56 0 0 0.822 27 0.18
16 16 A 1 85 3 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 74 0 0 0.533 17 0.89
17 17 A 0 0 12 0 0 0 0 0 0 0 3 4 0 4 68 7 1 0 1 0 75 0 0 1.167 38 0.39
18 18 A 22 76 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 76 0 0 0.598 19 0.71
19 19 A 59 1 16 0 0 0 0 0 0 0 0 14 0 0 0 0 0 3 0 6 79 0 0 1.203 40 0.40
20 20 A 0 0 0 0 0 0 0 23 0 0 5 0 0 0 5 51 13 0 3 1 79 0 0 1.394 46 0.19
21 21 A 0 22 0 0 0 0 0 0 0 0 1 4 0 0 19 53 1 0 0 0 79 0 0 1.217 40 0.14
22 22 A 0 0 0 0 0 0 0 4 8 0 4 24 0 0 0 0 0 46 3 13 79 0 0 1.500 50 0.32
23 23 A 0 0 3 0 0 0 0 0 1 58 4 19 0 0 0 0 0 1 0 14 79 0 0 1.233 41 0.25
24 24 A 0 0 0 0 0 0 0 0 0 0 38 6 0 0 56 0 0 0 0 0 79 0 0 0.868 28 0.26
25 25 A 0 0 0 0 0 0 0 0 0 0 24 20 0 0 3 0 53 0 0 0 79 0 0 1.095 36 0.11
26 26 A 4 75 0 1 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 79 0 0 0.721 24 0.44
27 27 A 0 4 0 0 0 0 0 0 0 0 18 1 0 0 0 0 1 76 0 0 79 0 0 0.750 25 0.48
28 28 A 18 78 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 79 0 0 0.621 20 0.77
29 29 A 0 0 0 0 0 0 0 0 9 0 22 70 0 0 0 0 0 0 0 0 79 0 0 0.797 26 0.55
30 30 A 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 79 0 0 0.000 0 1.00
31 31 A 0 13 0 0 0 0 0 0 54 3 4 0 0 0 0 0 4 5 0 18 79 0 0 1.392 46 0.17
32 32 A 1 1 1 0 0 0 0 56 13 24 0 0 0 4 0 0 0 0 0 0 79 0 0 1.220 40 0.29
33 33 A 0 0 0 0 0 0 0 1 1 39 56 1 0 0 0 0 0 0 0 1 79 0 0 0.914 30 0.44
34 34 A 22 0 0 1 0 4 0 0 0 0 0 0 0 1 63 0 5 0 4 0 79 0 0 1.130 37 0.22
35 35 A 0 28 0 0 0 0 0 0 0 57 0 0 0 3 3 0 10 0 0 0 79 0 0 1.095 36 0.10
36 36 A 0 0 0 0 0 0 0 0 20 1 1 1 0 0 68 0 4 4 0 0 79 0 0 0.998 33 0.25
37 37 A 0 1 0 0 0 0 0 0 0 1 65 0 0 0 1 0 0 25 6 0 79 0 0 0.971 32 0.38
38 38 A 0 1 0 0 0 0 0 0 1 54 3 0 0 1 33 0 6 0 0 0 79 0 0 1.131 37 0.33
39 39 A 4 0 0 0 0 0 0 52 0 0 5 10 0 1 3 0 0 0 25 0 79 0 0 1.344 44 0.27
40 40 A 4 0 1 0 0 0 0 68 13 1 11 0 0 0 0 0 1 0 0 0 79 0 0 1.059 35 0.59
41 41 A 14 4 1 0 0 1 0 0 0 1 1 0 0 9 11 1 0 0 56 0 79 0 0 1.463 48 0.07
42 42 A 0 59 22 0 0 0 0 0 0 1 1 0 0 1 0 1 3 10 1 0 79 0 0 1.241 41 0.27
43 43 A 1 0 0 0 0 0 16 0 1 0 44 34 0 1 1 0 0 0 0 0 79 0 0 1.246 41 0.13
44 44 A 0 1 0 0 1 0 57 0 0 0 3 0 0 0 0 4 0 16 18 0 79 0 0 1.252 41 0.02
45 45 A 16 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 58 0 0 79 0 0 0.960 32 -0.04
46 46 A 0 59 0 14 0 0 0 0 0 0 8 19 0 0 0 0 0 0 0 0 79 0 0 1.095 36 0.29
47 47 A 20 4 0 4 10 0 6 0 0 0 0 0 0 56 0 0 0 0 0 0 79 0 0 1.304 43 0.06
48 48 A 76 0 1 4 15 0 3 0 0 0 0 0 0 1 0 0 0 0 0 0 79 0 0 0.823 27 0.53
49 49 A 0 53 0 0 1 0 24 0 0 0 0 0 0 0 3 1 3 15 0 0 79 0 22 1.262 42 0.08
50 50 A 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 16 1 3 73 1 79 0 0 0.879 29 0.57
51 51 A 0 0 0 0 0 0 4 16 0 0 20 0 0 0 1 0 58 0 0 0 79 0 0 1.115 37 0.15
52 52 A 0 0 0 0 0 0 0 1 0 4 0 0 0 0 0 3 19 18 1 54 79 0 0 1.281 42 0.53
53 53 A 3 1 4 0 0 0 0 0 3 0 0 0 0 1 0 3 19 65 0 3 79 0 0 1.205 40 0.46
54 54 A 0 0 0 0 0 0 0 0 13 0 0 3 0 0 0 3 1 78 1 1 79 0 0 0.804 26 0.60
55 55 A 4 19 0 1 0 16 0 1 0 0 1 3 0 5 48 0 0 0 1 0 79 0 0 1.554 51 0.16
56 56 A 0 0 0 0 1 0 43 0 1 4 0 0 0 34 0 0 16 0 0 0 79 0 0 1.262 42 0.23
57 57 A 0 0 4 0 0 0 0 0 0 0 0 19 0 0 1 0 53 1 20 1 79 1 15 1.265 42 0.19
58 58 A 13 3 6 53 1 0 0 0 0 0 0 6 0 13 1 1 3 0 0 0 78 0 0 1.572 52 0.18
59 59 A 56 15 0 0 3 0 0 0 0 4 0 22 0 0 0 0 0 0 0 0 78 0 0 1.162 38 0.28
60 60 A 0 61 0 0 0 0 0 0 23 5 0 1 0 3 0 1 1 3 0 3 79 0 0 1.236 41 0.17
61 61 A 0 0 0 0 0 0 0 1 0 0 0 0 0 3 0 4 0 72 3 18 79 0 0 0.908 30 0.68
62 62 A 0 0 1 0 1 0 0 0 0 71 1 24 0 0 0 0 0 0 0 1 79 0 0 0.808 26 0.43
63 63 A 0 1 0 0 1 0 0 0 0 0 3 4 0 14 62 1 1 0 13 0 79 0 0 1.271 42 0.30
64 64 A 77 19 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 79 0 0 0.681 22 0.73
65 65 A 1 54 0 3 0 0 0 0 0 0 1 38 0 0 0 0 3 0 0 0 79 0 0 0.996 33 0.22
66 66 A 0 97 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 79 0 0 0.118 3 0.97
67 67 A 0 0 0 0 1 0 0 0 3 0 18 71 0 0 4 1 0 1 1 0 79 0 0 0.989 33 0.43
68 68 A 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 10 0 46 6 15 79 0 0 1.388 46 0.43
69 69 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 79 0 0 0.000 0 1.00
70 70 A 0 1 0 0 0 0 0 0 1 0 0 3 0 0 3 22 71 0 0 0 79 0 0 0.871 29 0.47
71 71 A 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 79 0 0 0.000 0 1.00
72 72 A 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 99 79 0 0 0.068 2 0.98
73 73 A 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 79 0 0 0.000 0 1.00
74 74 A 0 0 0 0 0 0 0 0 9 0 1 89 0 0 0 1 0 0 0 0 79 0 0 0.433 14 0.78
75 75 A 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 79 0 0 0.000 0 1.00
76 76 A 6 15 51 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 25 79 0 0 1.264 42 0.17
77 77 A 62 15 20 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 79 0 0 0.999 33 0.70
78 78 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 73 25 1 0 0 0 79 0 0 0.630 21 0.71
79 79 A 96 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 79 0 0 0.161 5 0.95
80 80 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 96 0 4 0 0 0 79 0 0 0.161 5 0.92
81 81 A 0 0 1 43 0 0 0 0 29 0 15 11 0 0 0 0 0 0 0 0 79 0 0 1.311 43 0.15
82 82 A 6 54 14 0 0 1 1 0 0 0 0 0 0 9 14 0 0 0 0 0 79 0 0 1.380 46 0.18
83 83 A 0 0 0 0 0 0 0 0 0 0 1 99 0 0 0 0 0 0 0 0 79 0 0 0.068 2 0.97
84 84 A 0 0 0 0 0 0 0 0 0 72 24 0 0 0 0 0 1 0 3 0 79 0 0 0.727 24 0.52
85 85 A 0 67 0 0 0 0 0 0 0 0 1 0 0 0 0 25 3 4 0 0 79 0 0 0.888 29 0.18
86 86 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 79 0 2 0.000 0 1.00
87 87 A 0 0 1 0 0 0 0 0 20 76 0 0 0 0 0 0 1 1 0 0 79 0 0 0.698 23 0.59
88 88 A 0 0 0 0 0 0 0 99 0 0 1 0 0 0 0 0 0 0 0 0 79 0 0 0.068 2 0.98
89 89 A 0 0 0 0 0 0 0 0 1 96 3 0 0 0 0 0 0 0 0 0 79 0 0 0.186 6 0.92
90 90 A 0 22 0 0 62 0 14 1 0 0 0 0 0 1 0 0 0 0 0 0 79 0 0 1.012 33 0.73
91 91 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 79 0 0 0.000 0 1.00
92 92 A 0 0 0 0 0 0 0 0 6 78 0 1 0 0 0 1 13 0 0 0 79 0 0 0.737 24 0.63
93 93 A 0 0 0 0 0 0 0 1 0 0 25 0 0 0 0 0 0 19 0 54 79 0 0 1.050 35 0.39
94 94 A 5 0 20 0 0 0 0 0 0 0 0 0 0 58 0 1 15 0 0 0 79 0 0 1.131 37 0.16
95 95 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 75 0 0 79 0 0 0.566 18 0.69
96 96 A 0 0 0 0 78 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 79 0 0 0.521 17 0.38
97 97 A 0 0 0 0 0 0 0 0 0 0 0 0 0 1 96 0 1 1 0 0 79 0 0 0.203 6 0.91
98 98 A 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 79 0 0 0.000 0 1.00
99 99 A 3 21 0 19 0 0 0 0 0 0 58 0 0 0 0 0 0 0 0 0 78 0 0 1.053 35 0.09
100 100 A 0 0 0 0 0 0 0 0 1 99 0 0 0 0 0 0 0 0 0 0 78 0 0 0.069 2 0.98
101 101 A 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 53 0 0 0.000 0 1.00
102 102 A 79 2 0 0 0 0 0 6 2 4 2 0 0 0 0 0 0 2 0 2 47 0 0 0.908 30 0.38
103 103 A 0 0 0 0 2 0 0 4 4 4 77 6 0 0 0 0 0 0 0 2 47 0 0 0.947 31 0.44
104 104 A 0 0 0 0 0 0 0 2 0 2 7 0 0 0 84 5 0 0 0 0 43 0 0 0.652 21 0.51
105 105 A 0 0 0 0 0 0 0 71 3 0 20 0 0 0 6 0 0 0 0 0 35 0 0 0.827 27 0.54
106 106 A 0 0 0 0 0 0 0 0 0 25 75 0 0 0 0 0 0 0 0 0 4 0 0 0.562 18 0.36
107 107 A 0 0 0 0 0 0 0 50 0 0 50 0 0 0 0 0 0 0 0 0 2 0 0 0.693 23 0.40
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
44 56 487 2 tVKh
45 56 486 2 tVKh
46 35 476 6 rRKEAEGe
46 43 490 2 tVRi
46 72 521 1 gTp
47 56 487 2 tVKh
48 56 474 2 tVKh
49 56 487 2 tVKh
50 56 438 2 tVKh
51 56 489 2 tVKh
52 56 489 2 tVKh
53 56 433 2 tVHh
54 35 896 3 yRDId
55 56 491 2 tVQh
56 56 651 2 tVKq
57 32 944 6 yRDINLPh
58 32 959 6 yRDINLPh
59 35 947 3 yRDIn
60 35 740 3 yRDIn
61 56 490 2 tVKq
62 35 956 3 yRDIn
63 32 943 6 yRDINLPh
64 35 961 3 yRDIn
65 35 947 3 yRDIn
66 35 956 3 yRDIn
67 35 966 3 yRDIn
68 35 956 3 yRDIn
69 35 948 3 yRDIn
70 35 958 3 yHDIn
71 35 957 3 yRDIn
72 35 956 3 yRDIn
73 35 956 5 fRDINSq
74 35 962 3 yHDIn
75 35 908 3 yRDIn
76 35 477 6 rMKEDQPe
76 43 491 2 tVLk
76 72 522 1 gHp
77 34 887 3 yRDIn
78 41 484 2 nVHr
//