Complet list of 1x4p hssp file
Complete list of 1x4p.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1X4P
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-12
HEADER RNA BINDING PROTEIN 14-MAY-05 1X4P
COMPND MOL_ID: 1; MOLECULE: PUTATIVE SPLICING FACTOR, ARGININE/SERINE-RICH 14
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: HOMO SAPIENS; ORGANISM_COMMON: HUMAN;
AUTHOR F.HE,Y.MUTO,M.INOUE,T.KIGAWA,M.SHIROUZU,T.TERADA,S.YOKOYAMA, RIKEN STR
DBREF 1X4P A 8 60 UNP Q8IX01 SFR14_HUMAN 587 639
SEQLENGTH 66
NCHAIN 1 chain(s) in 1X4P data set
NALIGN 104
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : A8K5G0_HUMAN 0.85 0.92 3 64 582 643 62 0 0 1082 A8K5G0 cDNA FLJ76836, highly similar to Homo sapiens splicing factor, arginine/serine-rich 14 (SFRS14), transcript variant 2, mRNA OS=Homo sapiens PE=2 SV=1
2 : E7ETX7_HUMAN 0.85 0.92 3 64 351 412 62 0 0 861 E7ETX7 SURP and G-patch domain-containing protein 2 OS=Homo sapiens GN=SUGP2 PE=2 SV=1
3 : F6SZK4_CALJA 0.85 0.92 3 64 582 643 62 0 0 1083 F6SZK4 SURP and G-patch domain-containing protein 2 OS=Callithrix jacchus GN=SUGP2 PE=2 SV=1
4 : F6SZN2_CALJA 0.85 0.92 3 64 582 643 62 0 0 1030 F6SZN2 Uncharacterized protein OS=Callithrix jacchus GN=SUGP2 PE=4 SV=1
5 : F6TB00_CALJA 0.85 0.92 3 64 351 412 62 0 0 862 F6TB00 Uncharacterized protein (Fragment) OS=Callithrix jacchus GN=SUGP2 PE=4 SV=1
6 : F6TML2_CALJA 0.85 0.92 3 64 530 591 62 0 0 988 F6TML2 Uncharacterized protein OS=Callithrix jacchus GN=SUGP2 PE=4 SV=1
7 : G1R2Q6_NOMLE 0.85 0.92 3 64 581 642 62 0 0 1081 G1R2Q6 Uncharacterized protein OS=Nomascus leucogenys GN=SUGP2 PE=4 SV=1
8 : G3RCI0_GORGO 0.85 0.92 3 64 582 643 62 0 0 1082 G3RCI0 Uncharacterized protein OS=Gorilla gorilla gorilla GN=101145800 PE=4 SV=1
9 : G3S0P7_GORGO 0.85 0.92 3 64 582 643 62 0 0 1068 G3S0P7 Uncharacterized protein OS=Gorilla gorilla gorilla GN=101145800 PE=4 SV=1
10 : H2R3L9_PANTR 0.85 0.92 3 64 582 643 62 0 0 1061 H2R3L9 Uncharacterized protein OS=Pan troglodytes GN=SUGP2 PE=4 SV=1
11 : K7C3X0_PANTR 0.85 0.92 3 64 582 643 62 0 0 1082 K7C3X0 SURP and G patch domain containing 2 OS=Pan troglodytes GN=SUGP2 PE=2 SV=1
12 : M0R2Z9_HUMAN 0.85 0.92 3 64 596 657 62 0 0 1096 M0R2Z9 SURP and G-patch domain-containing protein 2 OS=Homo sapiens GN=SUGP2 PE=2 SV=1
13 : M0R3F6_HUMAN 0.85 0.92 3 64 582 643 62 0 0 841 M0R3F6 SURP and G-patch domain-containing protein 2 OS=Homo sapiens GN=SUGP2 PE=2 SV=1
14 : SUGP2_HUMAN 1X4P 0.85 0.92 3 64 582 643 62 0 0 1082 Q8IX01 SURP and G-patch domain-containing protein 2 OS=Homo sapiens GN=SUGP2 PE=1 SV=2
15 : U3DKY5_CALJA 0.85 0.92 3 64 582 643 62 0 0 1083 U3DKY5 SURP and G-patch domain-containing protein 2 OS=Callithrix jacchus GN=SUGP2 PE=2 SV=1
16 : U3DSK0_CALJA 0.85 0.92 3 64 582 643 62 0 0 1083 U3DSK0 SURP and G-patch domain-containing protein 2 OS=Callithrix jacchus GN=SUGP2 PE=2 SV=1
17 : B4DSQ4_HUMAN 0.84 0.90 3 64 351 412 62 0 0 861 B4DSQ4 cDNA FLJ55365, highly similar to splicing factor, arginine/serine-rich14 OS=Homo sapiens PE=2 SV=1
18 : Q80U25_MOUSE 0.83 0.92 8 60 167 219 53 0 0 370 Q80U25 MKIAA0365 protein (Fragment) OS=Mus musculus GN=mKIAA0365 PE=2 SV=1
19 : F6ZC41_MACMU 0.82 0.90 3 64 583 644 62 0 0 1032 F6ZC41 Uncharacterized protein OS=Macaca mulatta GN=SUGP2 PE=4 SV=1
20 : F6ZC61_MACMU 0.82 0.90 3 64 583 644 62 0 0 1032 F6ZC61 Uncharacterized protein OS=Macaca mulatta GN=SUGP2 PE=4 SV=1
21 : F7CNG6_MACMU 0.82 0.90 3 64 583 644 62 0 0 976 F7CNG6 Uncharacterized protein OS=Macaca mulatta GN=SUGP2 PE=4 SV=1
22 : F7CNH3_MACMU 0.82 0.90 3 64 583 644 62 0 0 1084 F7CNH3 Uncharacterized protein OS=Macaca mulatta GN=SUGP2 PE=4 SV=1
23 : G7NNF9_MACMU 0.82 0.90 3 64 583 644 62 0 0 1084 G7NNF9 Arginine/serine-rich-splicing factor 14 OS=Macaca mulatta GN=SUGP2 PE=2 SV=1
24 : G7PX07_MACFA 0.82 0.90 3 64 583 644 62 0 0 1084 G7PX07 Arginine/serine-rich-splicing factor 14 OS=Macaca fascicularis GN=EGM_09470 PE=4 SV=1
25 : H2NY49_PONAB 0.82 0.90 3 64 579 640 62 0 0 1079 H2NY49 Uncharacterized protein OS=Pongo abelii GN=SUGP2 PE=4 SV=1
26 : Q4R8S4_MACFA 0.82 0.90 3 64 560 621 62 0 0 711 Q4R8S4 Testis cDNA clone: QtsA-11594, similar to human splicing factor, arginine/serine-rich 14 (SFRS14), OS=Macaca fascicularis PE=2 SV=1
27 : I3MVI6_SPETR 0.79 0.93 8 64 11 67 57 0 0 515 I3MVI6 Uncharacterized protein (Fragment) OS=Spermophilus tridecemlineatus GN=SUGP2 PE=4 SV=1
28 : G1SF67_RABIT 0.75 0.87 3 65 518 580 63 0 0 671 G1SF67 Uncharacterized protein (Fragment) OS=Oryctolagus cuniculus GN=SUGP2 PE=4 SV=1
29 : G9KNE7_MUSPF 0.74 0.90 3 64 375 436 62 0 0 858 G9KNE7 Splicing factor, arginine/serine-rich 14 (Fragment) OS=Mustela putorius furo PE=2 SV=1
30 : H0Y0K9_OTOGA 0.74 0.87 3 64 581 642 62 0 0 1083 H0Y0K9 Uncharacterized protein OS=Otolemur garnettii GN=SUGP2 PE=4 SV=1
31 : L5L647_PTEAL 0.74 0.87 3 64 581 642 62 0 0 1087 L5L647 Putative splicing factor, arginine/serine-rich 14 OS=Pteropus alecto GN=PAL_GLEAN10006714 PE=4 SV=1
32 : L8IEB9_9CETA 0.74 0.87 3 64 581 642 62 0 0 1096 L8IEB9 Putative splicing factor, arginine/serine-rich 14 OS=Bos mutus GN=M91_10166 PE=4 SV=1
33 : M3WC28_FELCA 0.74 0.89 3 64 581 642 62 0 0 1089 M3WC28 Uncharacterized protein OS=Felis catus GN=SUGP2 PE=4 SV=1
34 : M3YVK7_MUSPF 0.74 0.90 3 64 581 642 62 0 0 1095 M3YVK7 Uncharacterized protein OS=Mustela putorius furo GN=SUGP2 PE=4 SV=1
35 : D2GV47_AILME 0.73 0.89 3 64 581 642 62 0 0 1092 D2GV47 Uncharacterized protein (Fragment) OS=Ailuropoda melanoleuca GN=SUGP2 PE=4 SV=1
36 : D3ZJH2_RAT 0.73 0.84 3 64 565 626 62 0 0 1068 D3ZJH2 Protein Sugp2 OS=Rattus norvegicus GN=Sugp2 PE=4 SV=1
37 : E1BE55_BOVIN 0.73 0.87 3 64 580 641 62 0 0 1096 E1BE55 Uncharacterized protein OS=Bos taurus GN=SUGP2 PE=4 SV=1
38 : E2RGL4_CANFA 0.73 0.89 3 64 581 642 62 0 0 1082 E2RGL4 Uncharacterized protein OS=Canis familiaris GN=SUGP2 PE=4 SV=2
39 : E2RGP1_CANFA 0.73 0.89 3 64 581 642 62 0 0 1095 E2RGP1 Uncharacterized protein OS=Canis familiaris GN=SUGP2 PE=4 SV=2
40 : F7CNS0_HORSE 0.73 0.87 3 64 581 642 62 0 0 1077 F7CNS0 Uncharacterized protein OS=Equus caballus GN=SUGP2 PE=4 SV=1
41 : G3H480_CRIGR 0.73 0.84 3 64 565 626 62 0 0 1064 G3H480 Putative splicing factor, arginine/serine-rich 14 OS=Cricetulus griseus GN=I79_005080 PE=4 SV=1
42 : I3LFJ5_PIG 0.73 0.87 3 64 582 643 62 0 0 1095 I3LFJ5 Uncharacterized protein OS=Sus scrofa GN=SUGP2 PE=4 SV=1
43 : J9P3P4_CANFA 0.73 0.89 3 64 529 590 62 0 0 1043 J9P3P4 Uncharacterized protein OS=Canis familiaris GN=SUGP2 PE=4 SV=1
44 : SUGP2_MOUSE 0.73 0.84 3 64 565 626 62 0 0 1067 Q8CH09 SURP and G-patch domain-containing protein 2 OS=Mus musculus GN=Sugp2 PE=2 SV=2
45 : W5PJ99_SHEEP 0.73 0.85 3 64 581 642 62 0 0 1103 W5PJ99 Uncharacterized protein OS=Ovis aries GN=SUGP2 PE=4 SV=1
46 : K9J087_DESRO 0.71 0.86 3 65 580 642 63 0 0 1084 K9J087 Putative arginine/serine-rich 14 splicing factor OS=Desmodus rotundus PE=2 SV=1
47 : G5C5B7_HETGA 0.70 0.89 3 66 585 648 64 0 0 1100 G5C5B7 Putative splicing factor, arginine/serine-rich 14 OS=Heterocephalus glaber GN=GW7_11674 PE=4 SV=1
48 : L9L175_TUPCH 0.70 0.84 3 65 626 688 63 0 0 1128 L9L175 SURP and G-patch domain-containing protein 2 OS=Tupaia chinensis GN=TREES_T100014714 PE=4 SV=1
49 : G1PK10_MYOLU 0.68 0.86 3 65 581 643 63 0 0 1071 G1PK10 Uncharacterized protein OS=Myotis lucifugus GN=SUGP2 PE=4 SV=1
50 : G3TL82_LOXAF 0.67 0.86 3 66 578 641 64 0 0 1047 G3TL82 Uncharacterized protein OS=Loxodonta africana GN=SUGP2 PE=4 SV=1
51 : S7N669_MYOBR 0.67 0.84 3 66 620 683 64 0 0 1139 S7N669 SURP and G-patch domain-containing protein 2 OS=Myotis brandtii GN=D623_10018578 PE=4 SV=1
52 : F7DSD1_MONDO 0.64 0.84 3 63 596 656 61 0 0 1102 F7DSD1 Uncharacterized protein OS=Monodelphis domestica GN=SUGP2 PE=4 SV=2
53 : G3WE36_SARHA 0.64 0.82 3 63 599 659 61 0 0 1111 G3WE36 Uncharacterized protein OS=Sarcophilus harrisii GN=SUGP2 PE=4 SV=1
54 : G3WE37_SARHA 0.64 0.82 3 63 604 664 61 0 0 1109 G3WE37 Uncharacterized protein OS=Sarcophilus harrisii GN=SUGP2 PE=4 SV=1
55 : H0V7M6_CAVPO 0.60 0.87 3 65 578 640 63 0 0 1060 H0V7M6 Uncharacterized protein OS=Cavia porcellus GN=SUGP2 PE=4 SV=1
56 : K7FLY5_PELSI 0.57 0.79 3 65 307 369 63 0 0 827 K7FLY5 Uncharacterized protein OS=Pelodiscus sinensis GN=SUGP2 PE=4 SV=1
57 : R0L5C3_ANAPL 0.57 0.78 3 62 594 653 60 0 0 1096 R0L5C3 Putative splicing factor, arginine/serine-rich 14 (Fragment) OS=Anas platyrhynchos GN=Anapl_15277 PE=4 SV=1
58 : U3IFP4_ANAPL 0.57 0.78 3 62 575 634 60 0 0 1077 U3IFP4 Uncharacterized protein OS=Anas platyrhynchos GN=SUGP2 PE=4 SV=1
59 : E1C5N4_CHICK 0.56 0.79 3 65 586 648 63 0 0 1086 E1C5N4 Uncharacterized protein OS=Gallus gallus PE=4 SV=2
60 : G1MZ65_MELGA 0.56 0.79 3 65 543 605 63 0 0 1043 G1MZ65 Uncharacterized protein (Fragment) OS=Meleagris gallopavo GN=SUGP2 PE=4 SV=2
61 : G1MZ69_MELGA 0.56 0.79 3 65 546 608 63 0 0 1004 G1MZ69 Uncharacterized protein (Fragment) OS=Meleagris gallopavo GN=SUGP2 PE=4 SV=2
62 : F7E4S2_ORNAN 0.54 0.78 3 65 614 676 63 0 0 1050 F7E4S2 Uncharacterized protein OS=Ornithorhynchus anatinus GN=SUGP2 PE=4 SV=2
63 : T1DIF9_CROHD 0.49 0.76 3 65 540 602 63 0 0 1038 T1DIF9 SURP and G-patch domain-containing protein 2 OS=Crotalus horridus PE=2 SV=1
64 : H0YS57_TAEGU 0.46 0.78 3 65 271 333 63 0 0 684 H0YS57 Uncharacterized protein (Fragment) OS=Taeniopygia guttata GN=SUGP2 PE=4 SV=1
65 : H3AP92_LATCH 0.42 0.69 2 65 546 609 64 0 0 1041 H3AP92 Uncharacterized protein (Fragment) OS=Latimeria chalumnae PE=4 SV=1
66 : H3AP93_LATCH 0.42 0.69 2 65 511 574 64 0 0 1006 H3AP93 Uncharacterized protein (Fragment) OS=Latimeria chalumnae PE=4 SV=1
67 : H3AP94_LATCH 0.42 0.69 2 65 482 545 64 0 0 1009 H3AP94 Uncharacterized protein (Fragment) OS=Latimeria chalumnae PE=4 SV=1
68 : M3XHY4_LATCH 0.42 0.69 2 65 553 616 64 0 0 1174 M3XHY4 Uncharacterized protein OS=Latimeria chalumnae PE=4 SV=1
69 : F6Z0D2_XENTR 0.39 0.59 3 61 166 218 59 1 6 273 F6Z0D2 Uncharacterized protein OS=Xenopus tropicalis GN=sugp2 PE=4 SV=1
70 : G3U0P8_LOXAF 0.38 0.59 11 64 186 241 56 1 2 645 G3U0P8 Uncharacterized protein OS=Loxodonta africana GN=SUGP1 PE=4 SV=1
71 : H2TIC6_TAKRU 0.38 0.60 11 60 168 219 52 1 2 602 H2TIC6 Uncharacterized protein (Fragment) OS=Takifugu rubripes GN=LOC101061980 PE=4 SV=1
72 : H3DCY2_TETNG 0.38 0.60 11 60 168 219 52 1 2 599 H3DCY2 Uncharacterized protein (Fragment) OS=Tetraodon nigroviridis PE=4 SV=1
73 : Q4RV55_TETNG 0.38 0.60 11 60 164 215 52 1 2 595 Q4RV55 Chromosome 15 SCAF14992, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00028503001 PE=4 SV=1
74 : F6ZW49_XENTR 0.37 0.56 3 64 336 391 62 1 6 727 F6ZW49 Uncharacterized protein OS=Xenopus tropicalis GN=sugp2 PE=4 SV=1
75 : G3TIR9_LOXAF 0.37 0.58 10 64 122 178 57 1 2 582 G3TIR9 Uncharacterized protein (Fragment) OS=Loxodonta africana GN=SUGP1 PE=4 SV=1
76 : K7EM86_HUMAN 0.37 0.60 11 65 7 63 57 1 2 78 K7EM86 SURP and G-patch domain-containing protein 1 (Fragment) OS=Homo sapiens GN=SUGP1 PE=4 SV=3
77 : L5L656_PTEAL 0.37 0.60 11 65 178 234 57 1 2 631 L5L656 Splicing factor 4 OS=Pteropus alecto GN=PAL_GLEAN10006725 PE=4 SV=1
78 : G1PWP3_MYOLU 0.36 0.59 11 64 186 241 56 1 2 639 G1PWP3 Uncharacterized protein OS=Myotis lucifugus GN=SUGP1 PE=4 SV=1
79 : K9IM35_DESRO 0.36 0.59 11 64 182 237 56 1 2 635 K9IM35 Putative rna-binding protein OS=Desmodus rotundus PE=2 SV=1
80 : U3DN29_CALJA 0.34 0.55 3 65 180 244 65 1 2 641 U3DN29 SURP and G-patch domain-containing protein 1 OS=Callithrix jacchus GN=SUGP1 PE=2 SV=1
81 : A5PLN4_HUMAN 0.33 0.56 2 65 183 248 66 1 2 645 A5PLN4 Splicing factor 4 OS=Homo sapiens GN=SF4 PE=2 SV=1
82 : A8K7S0_HUMAN 0.33 0.56 2 65 183 248 66 1 2 645 A8K7S0 cDNA FLJ75478, highly similar to Homo sapiens splicing factor 4 (SF4), transcript variant a, mRNA OS=Homo sapiens PE=2 SV=1
83 : F6ZCT6_MACMU 0.33 0.56 2 65 106 171 66 1 2 568 F6ZCT6 Uncharacterized protein OS=Macaca mulatta GN=SUGP1 PE=4 SV=1
84 : F6ZCX1_MACMU 0.33 0.56 2 65 244 309 66 1 2 706 F6ZCX1 Uncharacterized protein OS=Macaca mulatta GN=SUGP1 PE=4 SV=1
85 : F7AJH5_HORSE 0.33 0.56 2 65 173 238 66 1 2 634 F7AJH5 Uncharacterized protein OS=Equus caballus GN=SUGP1 PE=4 SV=1
86 : F7AJT8_HORSE 0.33 0.56 2 65 179 244 66 1 2 640 F7AJT8 Uncharacterized protein OS=Equus caballus GN=SUGP1 PE=4 SV=1
87 : F7APL1_HORSE 0.33 0.56 2 65 180 245 66 1 2 641 F7APL1 Uncharacterized protein OS=Equus caballus GN=SUGP1 PE=4 SV=1
88 : G1R343_NOMLE 0.33 0.56 2 65 182 247 66 1 2 644 G1R343 Uncharacterized protein OS=Nomascus leucogenys GN=SUGP1 PE=4 SV=1
89 : G2HJM4_PANTR 0.33 0.56 2 65 183 248 66 1 2 645 G2HJM4 SURP and G patch domain containing 1 OS=Pan troglodytes GN=SUGP1 PE=2 SV=1
90 : G3QKG2_GORGO 0.33 0.56 2 65 183 248 66 1 2 645 G3QKG2 Uncharacterized protein OS=Gorilla gorilla gorilla GN=101149498 PE=4 SV=1
91 : G7NNG9_MACMU 0.33 0.56 2 65 244 309 66 1 2 706 G7NNG9 Putative uncharacterized protein OS=Macaca mulatta GN=EGK_10359 PE=4 SV=1
92 : H0VAW3_CAVPO 0.33 0.58 2 65 182 247 66 1 2 651 H0VAW3 Uncharacterized protein OS=Cavia porcellus GN=SUGP1 PE=4 SV=1
93 : H0X1N3_OTOGA 0.33 0.56 2 65 183 248 66 1 2 645 H0X1N3 Uncharacterized protein OS=Otolemur garnettii PE=4 SV=1
94 : H2NY59_PONAB 0.33 0.56 2 65 147 212 66 1 2 609 H2NY59 Uncharacterized protein OS=Pongo abelii GN=SUGP1 PE=4 SV=1
95 : H9ERV6_MACMU 0.33 0.56 2 65 183 248 66 1 2 645 H9ERV6 SURP and G-patch domain-containing protein 1 OS=Macaca mulatta GN=SF4 PE=2 SV=1
96 : H9KWA1_CALJA 0.33 0.56 2 65 173 238 66 1 2 635 H9KWA1 Uncharacterized protein (Fragment) OS=Callithrix jacchus GN=SUGP1 PE=4 SV=1
97 : I3JVA4_ORENI 0.33 0.56 2 65 183 248 66 1 2 636 I3JVA4 Uncharacterized protein OS=Oreochromis niloticus GN=LOC100705816 PE=4 SV=1
98 : I3LXT6_SPETR 0.33 0.56 2 65 180 245 66 1 2 643 I3LXT6 Uncharacterized protein OS=Spermophilus tridecemlineatus GN=SUGP1 PE=4 SV=1
99 : K7D4F1_PANTR 0.33 0.56 2 65 183 248 66 1 2 645 K7D4F1 SURP and G patch domain containing 1 OS=Pan troglodytes GN=SUGP1 PE=2 SV=1
100 : M7AGP9_CHEMY 0.33 0.56 4 64 154 216 63 1 2 966 M7AGP9 SURP and G-patch domain-containing protein 1 OS=Chelonia mydas GN=UY3_18743 PE=4 SV=1
101 : Q4V7M9_XENLA 0.33 0.56 3 65 522 578 63 1 6 961 Q4V7M9 MGC115540 protein OS=Xenopus laevis GN=sugp2 PE=2 SV=1
102 : SUGP1_HUMAN 0.33 0.56 2 65 183 248 66 1 2 645 Q8IWZ8 SURP and G-patch domain-containing protein 1 OS=Homo sapiens GN=SUGP1 PE=1 SV=2
103 : U3E6Y9_CALJA 0.33 0.56 2 65 183 248 66 1 2 645 U3E6Y9 SURP and G-patch domain-containing protein 1 OS=Callithrix jacchus GN=SUGP1 PE=2 SV=1
104 : V9GZ08_HUMAN 0.33 0.56 2 65 151 216 66 1 2 242 V9GZ08 SURP and G-patch domain-containing protein 1 (Fragment) OS=Homo sapiens GN=SUGP1 PE=4 SV=1
## ALIGNMENTS 1 - 70
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A G 0 0 136 1 0
2 2 A S - 0 0 127 27 13 PPPP
3 3 A S S S+ 0 0 122 93 49 AAAAAAAAAAAAAAAAA AAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
4 4 A G S S- 0 0 76 94 31 DDDDDDDDDDDDDDDDD DDDDDDDD GDDDDDDDDDDDDDDDDDDDDDGDDDDDDDDDDDDDDDDDDD
5 5 A S - 0 0 129 94 86 HHHHHHHHHHHHHHHHH HHHHHHHH HHHHHHHHHHHHHHHHHHHYQHHHRRRSRRRRRRRRRPPPPP
6 6 A S - 0 0 91 94 62 RRKKKKRRRRRRRRKKR KKKKKKRK EKKKKKKKRKKKKRKKRKKRKKKKKKKRRKKKEEKKKKKKKE
7 7 A G S S- 0 0 64 94 57 VVVVVVVVVVVVVVVVV VVVVVVVV VVVVVVVVVVVVVVVVVVMMVVVVVVVVVIIIIIVVVVVVVV
8 8 A V S > S+ 0 0 23 96 83 VVVVVVVVVVVVVVVVVVAAAAAAVAVVVVVVVVVVVVVVVVVVAVVVVVVVVVVVVVVVVVVVKKKKV
9 9 A G H > + 0 0 39 96 73 GGGGGGGGGGGGGGGGGDDDDDDDGDDGDDDDDDDDDDDDDDDDDDDDDEDEEEDEEEEEEEEDQQQQA
10 10 A T H >> S+ 0 0 57 97 62 TTTTTTTTTTTTTTTTTTTTTTTTITTTTTTITTTTITTTTITTITTVITITTTTTTTTTTITTMMMMT
11 11 A I H 3> S+ 0 0 0 105 0 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
12 12 A D H 3X S+ 0 0 70 105 23 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDENDNEEEEEEEEEEEEEDDDDDE
13 13 A Q H X S+ 0 0 2 105 2 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLFFFLLLLLLLLLLLLLLLL
15 15 A V H 3X S+ 0 0 0 105 61 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVLA
16 16 A K H 3X S+ 0 0 101 105 77 KKKKKKKKKKKKKKKKKMKKKKKKKKTTTGTATTTMATTTMSTMATTTTITKKKAKNNNNNKKSEEEEER
17 17 A R H S+ 0 0 90 105 107 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRSSSRSSSSSSTTSCCCCNF
18 18 A V H <5S+ 0 0 22 105 16 VVVVVVVVVVVVVVVVVVVVVVVVVVIIVVVVIVVVVIIVVVIVVVVVVIVIIIIIIIIIIIMIVVVVAV
19 19 A I H <5S+ 0 0 43 105 75 IIIIIIIIIIIIIIIIIIIIIIIIIIVVVVIIVVVIIVVVIVVIIVLVVVVITTVVVVVVVNVVVVVVKA
20 20 A E H <5S- 0 0 140 105 36 EEEEEEEEEEEEEEEEEQEEEEEEEEEEEEGGGEGQGGGGQGGQGGEEGEGEEEGSSSSSSESSEEEENE
21 21 A G T <5 + 0 0 44 105 5 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDDDDGg
22 22 A S < + 0 0 101 102 78 SSSSSSSSSSSSSSSSSRSSSSSSGSTSSSSSSSSRSSSSRSSRSSTSSSSNNNATTTTTTTMTAAAA.e
23 23 A L S S- 0 0 17 102 10 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLTTTT.L
24 24 A S > - 0 0 79 102 67 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTTSQQQQ.E
25 25 A P H > S+ 0 0 107 102 80 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPAAAAAAPGALLLL.K
26 26 A K H > S+ 0 0 121 102 80 KKKKKKKKKKKKKKKKKRKKKKKKKKKKKKKKKKKRKKKKRKKRKKRKKRKKKKRKKKKKKKKKEEEE.V
27 27 A E H > S+ 0 0 87 102 56 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEEEE.A
28 28 A R H >X S+ 0 0 101 105 69 RRRRRRRRRRRRRRRRRRRRRRRRRRRSRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRKRIIIIYM
29 29 A T H >X S+ 0 0 68 105 73 TTTTTTTTTTTTTTTTTTTTTTTTTTSAAAAATAATAAAATAATAAAAAAAAAAATNNNNNAASAAAAPE
30 30 A L H >X S+ 0 0 67 105 100 LLLLLLLLLLLLLLLLLLLLLLLLLLVVLDLLLLLLLLLLLLLLLHAALALSTTAAAAAAAAEAFFFFAD
31 31 A L H X< S+ 0 0 10 105 82 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLQQQQQQQLQKKKKDY
32 32 A K H << S+ 0 0 138 105 19 KKKKKKKKKKKKKKKKKLKKKKKKKKKKKKKKKKKLQKKKLKKLKKKQKKKKKKQKKKKKKKKKKKKKGK
33 33 A E H << S+ 0 0 146 105 38 EEEEEEEEEEEEEEEEEQEEEEEEEEEEEEEEEEEQEEEEQEEQEEEEEEEKKKESNNNNNKHNDDDDED
34 34 A D S X< S- 0 0 87 105 52 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDNNNDCSSCCCNNSNNNNKN
35 35 A P G > S+ 0 0 98 105 1 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPRPPPPPPPPPPPPPPPPPPPPPP
36 36 A A G 3 S+ 0 0 52 105 32 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAVAAAAAAAAAAAAAAAAAAAAATTTEEEEEEEDEEAAAAVA
37 37 A Y G < S+ 0 0 28 105 10 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYFYYCCCCFF
38 38 A W X> + 0 0 139 105 87 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWS
39 39 A F T 34 S+ 0 0 1 105 0 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
40 40 A L T 34 S+ 0 0 17 105 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
41 41 A S T <4 S+ 0 0 114 105 90 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSLCFFFFFH
42 42 A D < + 0 0 75 105 2 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDEDDDDDEEDDDDDDD
43 43 A E + 0 0 130 105 60 EEEEEEEEEEEEEEEEEEEEEEEEEEEEDEDDDDDEDDDDEDDEDDEEDKDEEEEEEEEEEEEKQQQQKK
44 44 A N S S+ 0 0 157 105 47 NNNNNNNNNNNNNNNNNSNNNNNNNNNNSNSSSSSSSSSSSSSSSSNNSDSDDDSDDDDDDDEDSSSSDN
45 45 A S S S- 0 0 21 105 0 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
46 46 A L S >> S+ 0 0 76 105 88 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLMHHHHSR
47 47 A E H 3> S+ 0 0 41 105 0 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
48 48 A Y H 3> S+ 0 0 31 105 11 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYFYYHYYYYYYYYYYYYYYF
49 49 A K H <> S+ 0 0 125 105 81 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKNKNKKKKKKKKKKKKKKKKKKL
50 50 A Y H X>S+ 0 0 77 105 0 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
51 51 A Y H <5S+ 0 0 34 105 0 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
52 52 A K H X5S+ 0 0 101 105 33 KKKKKKKKKKKKKKKKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRRRRRRKKRKKKKRR
53 53 A L H >X5S+ 0 0 78 105 89 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLAAAAQK
54 54 A K H 3X5S+ 0 0 46 105 1 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKKKKKKKKKKKKKRKKKKKK
55 55 A L H 3> S+ 0 0 23 96 83 V RRRRRRRRRRRRRRRRRRRRRVRRR
9 9 A G H > + 0 0 39 96 73 A KKKKKKKKKKKKKKKKKLKKKAKKK
10 10 A T H >> S+ 0 0 57 97 62 TV VVVVVVVVVVVVVVVVVIVVVAVVV
11 11 A I H 3> S+ 0 0 0 105 0 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIVIIII
12 12 A D H 3X S+ 0 0 70 105 23 EEEDEEEEEEEEEEEEEEEEEEEEEEDEEEDEEE
13 13 A Q H X S+ 0 0 2 105 2 MMMLLLLLLLLLLLLLLLLLLLLLLLMLLLLLLL
15 15 A V H 3X S+ 0 0 0 105 61 AAALAAAAAAAAAAAAAAAAAAAAAAAAAALAAA
16 16 A K H 3X S+ 0 0 101 105 77 SSSERRRRRRRRRRRRRRRRRRRRRRSRRRERRR
17 17 A R H S+ 0 0 90 105 107 FFFNFFFFFFFFFFFFFFFFFFFFFFFFFFNFFF
18 18 A V H <5S+ 0 0 22 105 16 VVVAVVVVVVVVVVVVVVVVVVVVVVVVVVAVVV
19 19 A I H <5S+ 0 0 43 105 75 AAAKAAAAAAAAAAAAAAAAAAAAAAAAAAKAAA
20 20 A E H <5S- 0 0 140 105 36 EEENEEEEEEEEEEEEEEEEEEEEEEEEEENEEE
21 21 A G T <5 + 0 0 44 105 5 gggGggggggggggggggggggggggggggGggg
22 22 A S < + 0 0 101 102 78 eee.eeeeeeeeeeeeeeeeeeeeeeeeee.eee
23 23 A L S S- 0 0 17 102 10 LLL.LLLLLLLLLLLLLLLLLLLLLLLLLL.LLL
24 24 A S > - 0 0 79 102 67 EEE.EEEEEEEEEEEEEEEEEEEEEEEEEE.EEE
25 25 A P H > S+ 0 0 107 102 80 RRR.KKKKKKKKKKKKKKKKKKKKKKKKKK.KKK
26 26 A K H > S+ 0 0 121 102 80 KKK.VVVVVVVVVVVVVVVVVVVVVVKVVV.VVV
27 27 A E H > S+ 0 0 87 102 56 AAA.AAAAAAAAAAAAAAAAAAAAAAAAAA.AAA
28 28 A R H >X S+ 0 0 101 105 69 RRRYMMMMMMMMMMMMMMMMMMMMMMKMMMYMMM
29 29 A T H >X S+ 0 0 68 105 73 DDDPEEEEEEEEEEEEEEEEEEEEEEEEEEPEEE
30 30 A L H >X S+ 0 0 67 105 100 DDDADDNNNDDDDDNNNDDDDDDDDDDDDDADDD
31 31 A L H X< S+ 0 0 10 105 82 YYYDYYYYYYYYYYYYYYYYYYYYYYYYYYNYYY
32 32 A K H << S+ 0 0 138 105 19 KKKGKKKKKKKKKKKKKKKKKKKKKKKKKKEKKK
33 33 A E H << S+ 0 0 146 105 38 DDDEDDDDDDDDDDDDDDDDDDDDDDDDDDQDDD
34 34 A D S X< S- 0 0 87 105 52 NNNKNNNNNNNNNNNNNNNNNNNNNNNNNNKNNN
35 35 A P G > S+ 0 0 98 105 1 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
36 36 A A G 3 S+ 0 0 52 105 32 VVVVAAAAAAAAAAAAAAAAAAAAAAVAAAAAAA
37 37 A Y G < S+ 0 0 28 105 10 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
38 38 A W X> + 0 0 139 105 87 TAAWSASSSAAAAASSSAAVATSAAASAASWAAA
39 39 A F T 34 S+ 0 0 1 105 0 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
40 40 A L T 34 S+ 0 0 17 105 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
41 41 A S T <4 S+ 0 0 114 105 90 FFFFHHHHHHHHHHHHHHHHHHHHHHYHHHFHHH
42 42 A D < + 0 0 75 105 2 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
43 43 A E + 0 0 130 105 60 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKEKKK
44 44 A N S S+ 0 0 157 105 47 GGGDNNNNNNNNNNNNNNNNNNNNNNSNNNDNNN
45 45 A S S S- 0 0 21 105 0 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
46 46 A L S >> S+ 0 0 76 105 88 MMMSRRRRRRRRRRRRRRRRRRRRRRVRRRSRRR
47 47 A E H 3> S+ 0 0 41 105 0 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
48 48 A Y H 3> S+ 0 0 31 105 11 HHHYFFFFFFFFFFFFFFFFFFFFFFYFFFFFFF
49 49 A K H <> S+ 0 0 125 105 81 LLLKLLLLLLLLLLLLLLLLLLLLLLLLLLKLLL
50 50 A Y H X>S+ 0 0 77 105 0 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
51 51 A Y H <5S+ 0 0 34 105 0 FFFYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
52 52 A K H X5S+ 0 0 101 105 33 KKKRRRRRRRRRRRRRRRRRRRRRRRKRRRHRRR
53 53 A L H >X5S+ 0 0 78 105 89 KKKQKKKKKKKKKKKKKKKKKKKKKKKKKKQKKK
54 54 A K H 3X5S+ 0 0 46 105 1 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
55 55 A L H 3>