Complet list of 1x3q hssp file
Complete list of 1x3q.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1X3Q
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-12
HEADER UNKNOWN FUNCTION 10-MAY-05 1X3Q
COMPND MOL_ID: 1; MOLECULE: CPSRP43; CHAIN: A; FRAGMENT: CHROMO-2 DOMAIN; ENG
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; ORGANISM_COMMON:
AUTHOR V.SIVARAJA,T.K.S.KUMAR,R.HENRY,C.YU
DBREF 1X3Q A 3 57 UNP O22265 O22265_ARATH 268 322
SEQLENGTH 57
NCHAIN 1 chain(s) in 1X3Q data set
NALIGN 34
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : SR43C_ARATH 3DEO 0.98 1.00 2 57 264 319 56 0 0 373 O22265 Signal recognition particle 43 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=CAO PE=1 SV=2
2 : R0GDV2_9BRAS 0.96 1.00 2 57 264 319 56 0 0 386 R0GDV2 Uncharacterized protein OS=Capsella rubella GN=CARUB_v10021283mg PE=4 SV=1
3 : D7LGN1_ARALL 0.95 0.98 2 57 253 308 56 0 0 366 D7LGN1 Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_904220 PE=4 SV=1
4 : V4LU51_THESL 0.88 0.96 2 57 249 304 56 0 0 364 V4LU51 Uncharacterized protein OS=Thellungiella salsuginea GN=EUTSA_v10000208mg PE=4 SV=1
5 : M4DC93_BRARP 0.86 0.95 2 57 261 316 56 0 0 380 M4DC93 Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=BRA014106 PE=4 SV=1
6 : I1LIP2_SOYBN 0.71 0.86 2 57 256 311 56 0 0 382 I1LIP2 Uncharacterized protein OS=Glycine max PE=4 SV=2
7 : B9HR05_POPTR 0.69 0.89 4 57 262 315 54 0 0 380 B9HR05 Chaos family protein OS=Populus trichocarpa GN=POPTR_0009s14260g PE=4 SV=2
8 : V4SA78_9ROSI 0.68 0.82 2 57 251 306 56 0 0 389 V4SA78 Uncharacterized protein OS=Citrus clementina GN=CICLE_v10028628mg PE=4 SV=1
9 : B9H1N6_POPTR 0.64 0.88 2 57 192 247 56 0 0 311 B9H1N6 Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s18750g PE=4 SV=2
10 : B9RF69_RICCO 0.62 0.86 2 57 252 307 56 0 0 396 B9RF69 Ankyrin repeat domain protein, putative OS=Ricinus communis GN=RCOM_1431980 PE=4 SV=1
11 : K4BBP7_SOLLC 0.62 0.84 2 57 259 314 56 0 0 368 K4BBP7 Uncharacterized protein OS=Solanum lycopersicum GN=Solyc02g087400.1 PE=4 SV=1
12 : M0ZLC9_SOLTU 0.62 0.84 2 57 263 318 56 0 0 372 M0ZLC9 Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400001299 PE=4 SV=1
13 : M5VMP6_PRUPE 0.62 0.84 2 57 214 269 56 0 0 333 M5VMP6 Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008415mg PE=4 SV=1
14 : S8C2S1_9LAMI 0.62 0.84 2 57 196 251 56 0 0 300 S8C2S1 Uncharacterized protein (Fragment) OS=Genlisea aurea GN=M569_13846 PE=4 SV=1
15 : A5C8N4_VITVI 0.61 0.88 2 57 257 312 56 0 0 373 A5C8N4 Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027983 PE=4 SV=1
16 : F6I0T6_VITVI 0.61 0.88 2 57 257 312 56 0 0 373 F6I0T6 Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0038g03560 PE=4 SV=1
17 : V7ADE1_PHAVU 0.61 0.77 1 57 299 355 57 0 0 424 V7ADE1 Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G025300g PE=4 SV=1
18 : J3LJM8_ORYBR 0.60 0.78 3 57 264 318 55 0 0 419 J3LJM8 Uncharacterized protein OS=Oryza brachyantha GN=OB03G12540 PE=4 SV=1
19 : W1NL70_AMBTC 0.60 0.76 2 57 266 323 58 1 2 378 W1NL70 Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00001p00270240 PE=4 SV=1
20 : I1HA39_BRADI 0.58 0.75 3 57 272 326 55 0 0 399 I1HA39 Uncharacterized protein OS=Brachypodium distachyon GN=BRADI1G76290 PE=4 SV=1
21 : A2XC41_ORYSI 0.56 0.76 3 57 266 320 55 0 0 388 A2XC41 Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_09862 PE=4 SV=1
22 : C5WZV5_SORBI 0.56 0.75 3 57 319 373 55 0 0 435 C5WZV5 Putative uncharacterized protein Sb01g048210 OS=Sorghum bicolor GN=Sb01g048210 PE=4 SV=1
23 : I1P787_ORYGL 0.56 0.76 3 57 266 320 55 0 0 388 I1P787 Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1
24 : SR43C_ORYSJ 0.56 0.76 3 57 266 320 55 0 0 388 Q8LSQ2 Probable signal recognition particle 43 kDa protein, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0131900 PE=2 SV=1
25 : C0P9X8_MAIZE 0.55 0.75 3 57 266 320 55 0 0 382 C0P9X8 Uncharacterized protein OS=Zea mays PE=2 SV=1
26 : K4AKQ4_SETIT 0.55 0.75 3 57 265 319 55 0 0 385 K4AKQ4 Uncharacterized protein OS=Setaria italica GN=Si039479m.g PE=4 SV=1
27 : A9SYD6_PHYPA 0.44 0.72 1 57 181 237 57 0 0 285 A9SYD6 Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_15522 PE=4 SV=1
28 : D8RDK6_SELML 0.40 0.67 1 57 252 309 58 1 1 361 D8RDK6 Putative uncharacterized protein OS=Selaginella moellendorffii GN=SELMODRAFT_270723 PE=4 SV=1
29 : D8T2U0_SELML 0.40 0.67 1 57 252 309 58 1 1 361 D8T2U0 Putative uncharacterized protein OS=Selaginella moellendorffii GN=SELMODRAFT_160480 PE=4 SV=1
30 : A8JIB9_CHLRE 0.39 0.65 9 53 64 112 49 1 4 382 A8JIB9 Chloroplast SRP43/CAO subunit of signal recognition particle OS=Chlamydomonas reinhardtii GN=SRP43 PE=4 SV=1
31 : L7V0A4_CHLRE 0.39 0.65 7 53 62 112 51 1 4 430 L7V0A4 Chloroplast SRP43 OS=Chlamydomonas reinhardtii GN=cpSRP43 PE=2 SV=1
32 : D8TZZ9_VOLCA 0.37 0.61 7 53 55 105 51 1 4 561 D8TZZ9 Putative uncharacterized protein OS=Volvox carteri GN=VOLCADRAFT_105313 PE=4 SV=1
33 : K8ENU2_9CHLO 0.37 0.67 5 57 232 285 54 1 1 315 K8ENU2 Uncharacterized protein OS=Bathycoccus prasinos GN=Bathy14g02660 PE=4 SV=1
34 : F0ZFW6_DICPU 0.36 0.60 9 55 32 86 55 3 8 87 F0ZFW6 Putative uncharacterized protein (Fragment) OS=Dictyostelium purpureum GN=DICPUDRAFT_12703 PE=4 SV=1
## ALIGNMENTS 1 - 34
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A G 0 0 126 5 38 E DDD
2 2 A S + 0 0 76 21 42 GGGGDG EEEDDGGEEG E EEE
3 3 A Q - 0 0 100 29 39 QQQQQA AEEAAAAAAAAAAAAAAAAAAA
4 4 A V + 0 0 82 30 28 VVVVVVIVIIIIIIIIVVVVVVVVVVICC
5 5 A F S S- 0 0 150 31 3 FFFFFFFFFFFFFYFFFYYYYYYYYYYYY F
6 6 A E - 0 0 147 31 0 EEEEEEEEEEEEEEEEEEEEEEEEEEEEE E
7 7 A Y + 0 0 11 33 56 YYYYYYYYYYYYYFYYYWDWWWWWWWTTT YYE
8 8 A A + 0 0 69 33 54 AAAAAAAAAAAAAAAAVGAGGAGGAAVVV KKV
9 9 A E - 0 0 34 35 26 EEEEEEEEEEQQEEEEEEEEEEEEEEESSEEEVE
10 10 A V S S+ 0 0 98 35 14 VVVVVVVVVVVVVVVVAVVVVVVVVVVVVVVVPI
11 11 A D S S+ 0 0 107 35 36 DDEQEQQQQQEEQEQQQEEEEEEEEEEDDEEESD
12 12 A E S S- 0 0 134 35 52 EEEEEEEEEEEEEEEEEKAKKKKKKKQQQEEENT
13 13 A I - 0 0 34 35 23 IVIIIIIIILIILIIIIVIVVVVVVVIVVLLLII
14 14 A V + 0 0 9 35 45 VVVVLLLLLLLLLLMMLVLVVIVVIILLLAAAIV
15 15 A E + 0 0 61 35 32 EEEEEEEEEEEEEEEEEDEDDDDDDDDDDGGGDN
16 16 A K + 0 0 19 35 66 KKKKKRKKKKKKKKRRQGKGGGGGGGKKKAAASK
17 17 A R + 0 0 139 35 0 RRRRRRRRRRRRRRRRRRrRRRRRRRRrrrrrrr
18 18 A G - 0 0 53 35 31 GGGGGGGGGGGGGGGGGGgGGGGGGGIaassssg
19 19 A K B > -A 22 0A 155 35 65 KKKKRKKKKKKKKKKKKEVEEEEEEEVAADDDDK
20 20 A G T 3 S+ 0 0 88 35 22 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGPPTNG
21 21 A K T 3 S+ 0 0 204 35 69 KKKNKEKDRDEEDAQQEKKKKKKKKKNNNPPPGS
22 22 A D B < +A 19 0A 62 35 88 DDDDDNDQDKNNRDNNNWGWWWWWWWVKKRRRGR
23 23 A V - 0 0 19 35 64 VVVVVLLLMVVVVVLLLRVRRRRRRRTVVVVVVI
24 24 A E - 0 0 26 35 0 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
25 25 A Y + 0 0 3 35 0 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
26 26 A L + 0 0 30 35 6 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLYLL
27 27 A V + 0 0 4 35 9 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVTVI
28 28 A R S S+ 0 0 20 35 48 RRRKKRKKKKKKKKKKREKEEEEEEEKKKKKKER
29 29 A W S S- 0 0 67 35 2 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWY
30 30 A K S S+ 0 0 175 35 44 KKKKKKKRKKKKKKKKKRRSRRRRRRSSSKKKMK
31 31 A D + 0 0 56 35 4 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDN
32 32 A G S S+ 0 0 68 35 19 GGGGGGGGGGGGGAGGGGGGGGGGGGDEEGGGGA
33 33 A G S S- 0 0 73 35 58 GGEGGGSGGSEEGASSEGRGGGGGGGSTTSSSYg
34 34 A D S S- 0 0 129 35 44 DDDEDADDADDDDADDADPDDEDDEEEPPDDDQn
35 35 A C - 0 0 33 35 85 CCCCCNNNNNNNNNNNNRSRRRRRRREDDSSPED
36 36 A E + 0 0 88 35 49 EEEEDEEEEEEEEEEEEEEEEEEEEESSSTTTSV
37 37 A W - 0 0 71 35 0 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
38 38 A V - 0 0 73 35 36 VVVVVVVVVVVVVVVVVVVVVVVVVVELLEEEVV
39 39 A K > - 0 0 101 35 64 KKKKKKKKKKKKNKKKKKGKRKRRKRTPPVVVSP
40 40 A G T 4>S+ 0 0 0 35 45 GGGGGAAVAAAAASAAAAEAAAAAAATAAAASEQ
41 41 A V T >45S+ 0 0 116 35 85 VVVVVKKGRGWWKAGGKAAPAAAAAPESSAAALH
42 42 A H T 345S+ 0 0 134 35 93 HHHHHFFFFVLLLALLFWFWWWWWWWNEEDDNDY
43 43 A V T 3<5S- 0 0 25 35 25 VVVVVVIIIIIIIVIIVVVVVVVVMVIIILLLIL
44 44 A A T X>5 - 0 0 40 35 44 AAAAAAGAGGSSDAAAAAAAAAAAAAASSSSSSE
45 45 A E H 3> S+ 0 0 131 35 7 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDEDQ
51 51 A Y H > S+ 0 0 79 35 8 YYYYYYFYFFFFFFFFHFFFFFFFFFYYYFFYYF
52 52 A E H < S+ 0 0 4 35 12 EEEEEEEEEEEEEEEEEDEEDEDDEEEEEEEENE
53 53 A D H < S+ 0 0 65 35 42 DDDAAAAAAAAAAAAAAAEAAAAAAAEAAEEDDD
54 54 A G H >< S+ 0 0 52 32 6 GGGGGGGGGGGGGGGGGGGGGGGGGGGGG GE
55 55 A L T 3< S+ 0 0 65 32 1 LLLLLLLLLLLLLLLLLLLLLLLLLLLLL FL
56 56 A E T 3 0 0 36 31 0 EEEEEEEEEEEEEEEEEEEEEEEEEEEEE E
57 57 A Y < 0 0 210 31 0 YYYYYYYYYYYYYYYYYYYYYYYYYYYYY F
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 20 0 60 5 0 0 0.950 31 0.61
2 2 A 0 0 0 0 0 0 0 38 0 0 5 0 0 0 0 0 0 43 0 14 21 0 0 1.154 38 0.57
3 3 A 0 0 0 0 0 0 0 0 72 0 0 0 0 0 0 0 21 7 0 0 29 0 0 0.744 24 0.60
4 4 A 60 0 33 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 30 0 0 0.853 28 0.72
5 5 A 0 0 0 0 58 0 42 0 0 0 0 0 0 0 0 0 0 0 0 0 31 0 0 0.680 22 0.96
6 6 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 31 0 0 0.000 0 1.00
7 7 A 0 0 0 0 3 24 58 0 0 0 0 9 0 0 0 0 0 3 0 3 33 0 0 1.197 39 0.43
8 8 A 15 0 0 0 0 0 0 15 64 0 0 0 0 0 0 6 0 0 0 0 33 0 0 1.029 34 0.45
9 9 A 3 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 6 86 0 0 35 0 0 0.561 18 0.73
10 10 A 91 0 3 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 35 0 0 0.387 12 0.85
11 11 A 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 29 51 0 17 35 0 0 1.104 36 0.64
12 12 A 0 0 0 0 0 0 0 0 3 0 0 3 0 0 0 23 9 60 3 0 35 0 0 1.159 38 0.47
13 13 A 31 14 54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.973 32 0.76
14 14 A 31 43 11 6 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 35 0 0 1.349 45 0.55
15 15 A 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 54 3 34 35 0 0 1.011 33 0.68
16 16 A 0 0 0 0 0 0 0 23 9 0 3 0 0 0 9 54 3 0 0 0 35 0 0 1.293 43 0.34
17 17 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 35 0 8 0.000 0 1.00
18 18 A 0 0 3 0 0 0 0 80 6 0 11 0 0 0 0 0 0 0 0 0 35 0 0 0.692 23 0.68
19 19 A 6 0 0 0 0 0 0 0 6 0 0 0 0 0 3 51 0 23 0 11 35 0 0 1.356 45 0.35
20 20 A 0 0 0 0 0 0 0 89 0 6 0 3 0 0 0 0 0 0 3 0 35 0 0 0.474 15 0.77
21 21 A 0 0 0 0 0 0 0 3 3 9 3 0 0 0 3 43 6 11 11 9 35 0 0 1.850 61 0.31
22 22 A 3 0 0 0 0 23 0 6 0 0 0 0 0 0 14 9 3 0 17 26 35 0 0 1.844 61 0.12
23 23 A 51 17 3 3 0 0 0 0 0 0 0 3 0 0 23 0 0 0 0 0 35 0 0 1.286 42 0.35
24 24 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 35 0 0 0.000 0 1.00
25 25 A 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.000 0 1.00
26 26 A 0 97 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.130 4 0.93
27 27 A 94 0 3 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 35 0 0 0.259 8 0.91
28 28 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 54 0 26 0 0 35 0 0 1.003 33 0.51
29 29 A 0 0 0 0 0 97 3 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.130 4 0.98
30 30 A 0 0 0 3 0 0 0 0 0 0 11 0 0 0 26 60 0 0 0 0 35 0 0 1.005 33 0.56
31 31 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 97 35 0 0 0.130 4 0.95
32 32 A 0 0 0 0 0 0 0 86 6 0 0 0 0 0 0 0 0 6 0 3 35 0 0 0.561 18 0.80
33 33 A 0 0 0 0 0 0 3 51 3 0 23 6 0 0 3 0 0 11 0 0 35 0 1 1.396 46 0.42
34 34 A 0 0 0 0 0 0 0 0 11 9 0 0 0 0 0 0 3 14 3 60 35 0 0 1.246 41 0.56
35 35 A 0 0 0 0 0 0 0 0 0 3 9 0 17 0 23 0 0 6 34 9 35 0 0 1.693 56 0.14
36 36 A 3 0 0 0 0 0 0 0 0 0 11 9 0 0 0 0 0 74 0 3 35 0 0 0.882 29 0.51
37 37 A 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.000 0 1.00
38 38 A 83 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 35 0 0 0.567 18 0.63
39 39 A 9 0 0 0 0 0 0 3 0 9 3 3 0 0 11 60 0 0 3 0 35 0 0 1.382 46 0.35
40 40 A 3 0 0 0 0 0 0 17 63 0 6 3 0 0 0 0 3 6 0 0 35 0 0 1.226 40 0.55
41 41 A 17 3 0 0 0 6 0 11 31 6 6 0 0 3 3 11 0 3 0 0 35 0 0 2.059 68 0.15
42 42 A 3 14 0 0 17 23 3 0 3 0 0 0 0 17 0 0 0 6 6 9 35 0 0 2.062 68 0.06
43 43 A 49 11 37 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 1.068 35 0.74
44 44 A 0 0 0 0 0 0 0 9 63 0 23 0 0 0 0 0 0 3 0 3 35 0 0 1.043 34 0.55
45 45 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 89 0 11 35 0 1 0.355 11 0.90
46 46 A 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 91 35 0 0 0.347 11 0.86
47 47 A 17 83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.458 15 0.86
48 48 A 66 0 17 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.881 29 0.66
49 49 A 0 0 0 3 0 0 0 0 3 0 9 3 0 0 40 43 0 0 0 0 35 0 0 1.245 41 0.54
50 50 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 94 35 0 0 0.259 8 0.93
51 51 A 0 0 0 0 60 0 37 0 0 0 0 0 0 3 0 0 0 0 0 0 35 0 0 0.776 25 0.91
52 52 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 86 3 11 35 0 0 0.482 16 0.88
53 53 A 0 0 0 0 0 0 0 0 69 0 0 0 0 0 0 0 0 11 0 20 35 0 0 0.828 27 0.57
54 54 A 0 0 0 0 0 0 0 97 0 0 0 0 0 0 0 0 0 3 0 0 32 0 0 0.139 4 0.93
55 55 A 0 97 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32 0 0 0.139 4 0.98
56 56 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 31 0 0 0.000 0 1.00
57 57 A 0 0 0 0 3 0 97 0 0 0 0 0 0 0 0 0 0 0 0 0 31 0 0 0.143 4 0.99
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
19 17 282 2 rERg
28 18 269 1 rMa
29 18 269 1 rMa
30 10 73 4 rVVVEs
31 12 73 4 rVVVEs
32 12 66 4 rIIVDs
33 14 245 1 rIs
34 10 41 4 rNRVYg
34 26 61 2 gEDn
34 38 75 2 dCPm
//