Complet list of 1wxp hssp file
Complete list of 1wxp.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1WXP
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-11
HEADER TRANSPORT PROTEIN 28-JAN-05 1WXP
COMPND MOL_ID: 1; MOLECULE: THO COMPLEX SUBUNIT 1; CHAIN: A; FRAGMENT: DEATH
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: HOMO SAPIENS; ORGANISM_COMMON: HUMAN;
AUTHOR T.N.NIRAULA,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA,RIKEN STRUCTURAL GEN
DBREF 1WXP A 8 104 UNP Q96FV9 THOC1_HUMAN 561 657
SEQLENGTH 110
NCHAIN 1 chain(s) in 1WXP data set
NALIGN 88
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : Q6Y1I8_PANTR 0.98 0.99 6 104 102 200 99 0 0 200 Q6Y1I8 THO complex 1 (Fragment) OS=Pan troglodytes GN=THOC1 PE=4 SV=1
2 : F6T5R2_MACMU 0.96 0.98 4 104 556 656 101 0 0 656 F6T5R2 Uncharacterized protein OS=Macaca mulatta GN=THOC1 PE=4 SV=1
3 : F6YVL1_HORSE 0.96 0.98 4 104 557 657 101 0 0 657 F6YVL1 Uncharacterized protein OS=Equus caballus GN=THOC1 PE=4 SV=1
4 : F7HVG3_CALJA 0.96 0.98 4 104 557 657 101 0 0 657 F7HVG3 THO complex subunit 1 OS=Callithrix jacchus GN=THOC1 PE=2 SV=1
5 : G1R556_NOMLE 0.96 0.98 4 104 557 657 101 0 0 657 G1R556 Uncharacterized protein OS=Nomascus leucogenys GN=THOC1 PE=4 SV=1
6 : G7NKF9_MACMU 0.96 0.98 4 104 557 657 101 0 0 657 G7NKF9 THO complex subunit 1 OS=Macaca mulatta GN=THOC1 PE=2 SV=1
7 : G7PWG9_MACFA 0.96 0.98 4 104 557 657 101 0 0 657 G7PWG9 Macaca fascicularis brain cDNA clone: QmoA-10276, similar to human THO complex 1 (THOC1), mRNA, RefSeq: NM_005131.1 OS=Macaca fascicularis GN=EGM_08731 PE=2 SV=1
8 : H2QE64_PANTR 0.96 0.98 4 104 553 653 101 0 0 653 H2QE64 Uncharacterized protein OS=Pan troglodytes GN=THOC1 PE=4 SV=1
9 : K7A628_PANTR 0.96 0.98 4 104 557 657 101 0 0 657 K7A628 THO complex 1 OS=Pan troglodytes GN=THOC1 PE=2 SV=1
10 : L5K4L5_PTEAL 0.96 0.98 4 104 558 658 101 0 0 658 L5K4L5 THO complex subunit 1 OS=Pteropus alecto GN=PAL_GLEAN10023174 PE=4 SV=1
11 : THOC1_HUMAN 1WXP 0.96 0.98 4 104 557 657 101 0 0 657 Q96FV9 THO complex subunit 1 OS=Homo sapiens GN=THOC1 PE=1 SV=1
12 : U3CVP3_CALJA 0.96 0.98 4 104 564 664 101 0 0 664 U3CVP3 THO complex subunit 1 OS=Callithrix jacchus GN=THOC1 PE=2 SV=1
13 : G3QKJ3_GORGO 0.95 0.98 4 104 557 657 101 0 0 657 G3QKJ3 Uncharacterized protein OS=Gorilla gorilla gorilla GN=101147340 PE=4 SV=1
14 : M3XB82_FELCA 0.95 0.98 4 104 557 657 101 0 0 657 M3XB82 Uncharacterized protein OS=Felis catus GN=THOC1 PE=4 SV=1
15 : M3XF39_FELCA 0.95 0.98 4 104 559 659 101 0 0 659 M3XF39 Uncharacterized protein OS=Felis catus GN=THOC1 PE=4 SV=1
16 : D2HJY7_AILME 0.94 0.98 4 104 540 640 101 0 0 640 D2HJY7 Putative uncharacterized protein (Fragment) OS=Ailuropoda melanoleuca GN=PANDA_011654 PE=4 SV=1
17 : E2RNV0_CANFA 0.94 0.98 4 104 557 657 101 0 0 657 E2RNV0 Uncharacterized protein OS=Canis familiaris GN=THOC1 PE=4 SV=2
18 : F1MJV3_BOVIN 0.94 0.98 4 104 560 660 101 0 0 660 F1MJV3 Uncharacterized protein (Fragment) OS=Bos taurus GN=THOC1 PE=4 SV=1
19 : G1LJD0_AILME 0.94 0.98 4 104 559 659 101 0 0 659 G1LJD0 Uncharacterized protein (Fragment) OS=Ailuropoda melanoleuca GN=THOC1 PE=4 SV=1
20 : I3LE05_PIG 0.94 0.98 4 104 562 662 101 0 0 662 I3LE05 Uncharacterized protein (Fragment) OS=Sus scrofa GN=THOC1 PE=4 SV=1
21 : J9NUJ3_CANFA 0.94 0.98 4 104 399 499 101 0 0 499 J9NUJ3 Uncharacterized protein OS=Canis familiaris GN=THOC1 PE=4 SV=1
22 : L8IG96_9CETA 0.94 0.98 4 104 561 661 101 0 0 661 L8IG96 THO complex subunit 1 (Fragment) OS=Bos mutus GN=M91_00551 PE=4 SV=1
23 : W5PHK8_SHEEP 0.94 0.98 4 104 561 661 101 0 0 661 W5PHK8 Uncharacterized protein (Fragment) OS=Ovis aries GN=THOC1 PE=4 SV=1
24 : G1T1L7_RABIT 0.93 0.98 4 104 557 657 101 0 0 657 G1T1L7 Uncharacterized protein OS=Oryctolagus cuniculus GN=THOC1 PE=4 SV=1
25 : H0WGH1_OTOGA 0.93 0.96 4 104 555 655 101 0 0 655 H0WGH1 Uncharacterized protein (Fragment) OS=Otolemur garnettii GN=THOC1 PE=4 SV=1
26 : M3Y257_MUSPF 0.93 0.97 4 104 557 657 101 0 0 657 M3Y257 Uncharacterized protein OS=Mustela putorius furo GN=THOC1 PE=4 SV=1
27 : G1P1N2_MYOLU 0.92 0.97 4 104 558 658 101 0 0 658 G1P1N2 Uncharacterized protein OS=Myotis lucifugus PE=4 SV=1
28 : G3T407_LOXAF 0.92 0.97 4 104 557 657 101 0 0 657 G3T407 Uncharacterized protein OS=Loxodonta africana GN=THOC1 PE=4 SV=1
29 : G9KT87_MUSPF 0.92 0.94 3 103 556 656 101 0 0 656 G9KT87 THO complex 1 (Fragment) OS=Mustela putorius furo PE=2 SV=1
30 : K9IM17_DESRO 0.92 0.96 4 104 557 657 101 0 0 657 K9IM17 Putative nuclear matrix protein OS=Desmodus rotundus PE=2 SV=1
31 : L5LZV5_MYODS 0.92 0.97 4 104 557 657 101 0 0 657 L5LZV5 THO complex subunit 1 OS=Myotis davidii GN=MDA_GLEAN10025304 PE=4 SV=1
32 : S7P415_MYOBR 0.92 0.96 3 104 1310 1411 102 0 0 1411 S7P415 THO complex subunit 1 OS=Myotis brandtii GN=D623_10034234 PE=4 SV=1
33 : G5BTS4_HETGA 0.90 0.97 4 104 430 530 101 0 0 530 G5BTS4 THO complex subunit 1 OS=Heterocephalus glaber GN=GW7_00894 PE=4 SV=1
34 : L9KM01_TUPCH 0.90 0.95 3 104 1041 1142 102 0 0 1142 L9KM01 Collectin-12 OS=Tupaia chinensis GN=TREES_T100009921 PE=4 SV=1
35 : S9WAJ6_9CETA 0.90 0.96 3 104 934 1035 102 0 0 1035 S9WAJ6 Uncharacterized protein OS=Camelus ferus GN=CB1_007889002 PE=4 SV=1
36 : G3HUX5_CRIGR 0.88 0.96 4 104 250 350 101 0 0 350 G3HUX5 THO complex subunit 1 OS=Cricetulus griseus GN=I79_014746 PE=4 SV=1
37 : Q6TUH4_RAT 0.88 0.94 4 104 399 499 101 0 0 499 Q6TUH4 LRRGT00070 OS=Rattus norvegicus GN=Thoc1 PE=2 SV=1
38 : THOC1_MOUSE 0.88 0.95 4 104 557 657 101 0 0 657 Q8R3N6 THO complex subunit 1 OS=Mus musculus GN=Thoc1 PE=1 SV=1
39 : G3H7K0_CRIGR 0.87 0.93 3 104 110 211 102 0 0 211 G3H7K0 THO complex subunit 1 OS=Cricetulus griseus GN=I79_006332 PE=4 SV=1
40 : H0UV41_CAVPO 0.87 0.97 4 104 557 657 101 0 0 657 H0UV41 Uncharacterized protein OS=Cavia porcellus GN=THOC1 PE=4 SV=1
41 : K7EDN7_ORNAN 0.86 0.96 5 104 34 133 100 0 0 133 K7EDN7 Uncharacterized protein (Fragment) OS=Ornithorhynchus anatinus GN=LOC100077409 PE=4 SV=1
42 : F7G2Z0_MONDO 0.85 0.94 3 104 564 665 102 0 0 665 F7G2Z0 Uncharacterized protein OS=Monodelphis domestica GN=THOC1 PE=4 SV=2
43 : F6VST1_CALJA 0.84 0.94 4 103 155 253 100 1 1 264 F6VST1 Uncharacterized protein (Fragment) OS=Callithrix jacchus PE=4 SV=1
44 : G3WPU7_SARHA 0.84 0.94 3 104 558 659 102 0 0 659 G3WPU7 Uncharacterized protein OS=Sarcophilus harrisii GN=THOC1 PE=4 SV=1
45 : G3WPU8_SARHA 0.84 0.94 3 104 557 658 102 0 0 658 G3WPU8 Uncharacterized protein OS=Sarcophilus harrisii GN=THOC1 PE=4 SV=1
46 : M7BGC5_CHEMY 0.83 0.91 3 104 451 552 102 0 0 552 M7BGC5 THO complex subunit 1 (Fragment) OS=Chelonia mydas GN=UY3_11732 PE=4 SV=1
47 : G5AKD8_HETGA 0.82 0.94 6 104 35 133 99 0 0 133 G5AKD8 THO complex subunit 1 OS=Heterocephalus glaber GN=GW7_16941 PE=4 SV=1
48 : K7FK94_PELSI 0.81 0.91 3 104 443 544 102 0 0 544 K7FK94 Uncharacterized protein (Fragment) OS=Pelodiscus sinensis GN=THOC1 PE=4 SV=1
49 : THOC1_RAT 0.79 0.91 4 104 235 335 101 0 0 343 P59924 THO complex subunit 1 OS=Rattus norvegicus GN=Thoc1 PE=2 SV=1
50 : H0ZIX1_TAEGU 0.75 0.88 3 104 556 657 102 0 0 657 H0ZIX1 Uncharacterized protein (Fragment) OS=Taeniopygia guttata GN=THOC1 PE=4 SV=1
51 : R7VNP9_COLLI 0.75 0.89 3 104 553 654 102 0 0 654 R7VNP9 THO complex subunit 1 (Fragment) OS=Columba livia GN=A306_13092 PE=4 SV=1
52 : U3JUN5_FICAL 0.75 0.90 3 104 543 644 102 0 0 644 U3JUN5 Uncharacterized protein (Fragment) OS=Ficedula albicollis GN=THOC1 PE=4 SV=1
53 : V8NMW7_OPHHA 0.75 0.89 3 104 449 550 102 0 0 553 V8NMW7 THO complex subunit 1 (Fragment) OS=Ophiophagus hannah GN=Thoc1 PE=4 SV=1
54 : F1NMW7_CHICK 0.73 0.90 3 104 538 639 102 0 0 639 F1NMW7 Uncharacterized protein (Fragment) OS=Gallus gallus GN=THOC1 PE=4 SV=2
55 : G1KHP8_ANOCA 0.73 0.88 3 104 573 674 102 0 0 674 G1KHP8 Uncharacterized protein OS=Anolis carolinensis GN=THOC1 PE=4 SV=2
56 : G1NBW9_MELGA 0.73 0.89 3 104 541 642 102 0 0 642 G1NBW9 Uncharacterized protein (Fragment) OS=Meleagris gallopavo GN=THOC1 PE=4 SV=2
57 : U3J993_ANAPL 0.70 0.93 3 104 561 662 102 0 0 662 U3J993 Uncharacterized protein (Fragment) OS=Anas platyrhynchos GN=THOC1 PE=4 SV=1
58 : R0KEC8_ANAPL 0.69 0.92 3 104 472 573 102 0 0 573 R0KEC8 THO complex subunit 1 (Fragment) OS=Anas platyrhynchos GN=Anapl_02281 PE=4 SV=1
59 : V9KDA7_CALMI 0.60 0.81 4 104 558 658 101 0 0 658 V9KDA7 THO complex subunit 1 OS=Callorhynchus milii PE=2 SV=1
60 : V9KRL6_CALMI 0.60 0.81 4 104 444 544 101 0 0 544 V9KRL6 THO complex subunit 1-like protein (Fragment) OS=Callorhynchus milii PE=2 SV=1
61 : F6XN58_XENTR 0.58 0.80 3 104 574 675 103 2 2 675 F6XN58 Uncharacterized protein OS=Xenopus tropicalis GN=thoc1 PE=4 SV=1
62 : H3B4R0_LATCH 0.56 0.81 3 104 555 656 102 0 0 656 H3B4R0 Uncharacterized protein OS=Latimeria chalumnae PE=4 SV=1
63 : Q498H9_XENLA 0.56 0.80 3 104 553 654 103 2 2 654 Q498H9 LOC398505 protein OS=Xenopus laevis GN=thoc1 PE=2 SV=1
64 : Q640G4_XENLA 0.56 0.80 3 104 558 659 103 2 2 659 Q640G4 LOC398505 protein (Fragment) OS=Xenopus laevis GN=LOC398505 PE=2 SV=1
65 : Q7ZXL7_XENLA 0.56 0.80 3 104 558 659 103 2 2 659 Q7ZXL7 LOC398505 protein (Fragment) OS=Xenopus laevis GN=LOC398505 PE=2 SV=1
66 : W5M264_LEPOC 0.54 0.76 4 98 561 655 95 0 0 656 W5M264 Uncharacterized protein (Fragment) OS=Lepisosteus oculatus PE=4 SV=1
67 : H2UC24_TAKRU 0.52 0.78 4 97 408 501 94 0 0 501 H2UC24 Uncharacterized protein (Fragment) OS=Takifugu rubripes GN=LOC101070705 PE=4 SV=1
68 : I3JSL9_ORENI 0.52 0.78 4 99 589 684 96 0 0 684 I3JSL9 Uncharacterized protein OS=Oreochromis niloticus GN=thoc1 PE=4 SV=1
69 : M3ZJH4_XIPMA 0.52 0.78 4 98 559 653 95 0 0 654 M3ZJH4 Uncharacterized protein OS=Xiphophorus maculatus PE=4 SV=1
70 : Q4SLR0_TETNG 0.52 0.78 4 97 475 568 94 0 0 568 Q4SLR0 Chromosome 15 SCAF14556, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00016123001 PE=4 SV=1
71 : G3PZA7_GASAC 0.51 0.79 4 98 559 653 95 0 0 654 G3PZA7 Uncharacterized protein OS=Gasterosteus aculeatus PE=4 SV=1
72 : H2MTF7_ORYLA 0.51 0.79 4 97 560 653 94 0 0 653 H2MTF7 Uncharacterized protein (Fragment) OS=Oryzias latipes GN=LOC101157731 PE=4 SV=1
73 : H2UC22_TAKRU 0.51 0.78 4 100 560 656 97 0 0 660 H2UC22 Uncharacterized protein (Fragment) OS=Takifugu rubripes GN=LOC101070705 PE=4 SV=1
74 : H2UC23_TAKRU 0.51 0.77 4 103 561 660 100 0 0 661 H2UC23 Uncharacterized protein (Fragment) OS=Takifugu rubripes GN=LOC101070705 PE=4 SV=1
75 : H3CSS6_TETNG 0.51 0.78 4 99 561 656 96 0 0 656 H3CSS6 Uncharacterized protein (Fragment) OS=Tetraodon nigroviridis PE=4 SV=1
76 : I3JSL8_ORENI 0.50 0.75 4 104 561 661 101 0 0 661 I3JSL8 Uncharacterized protein (Fragment) OS=Oreochromis niloticus GN=thoc1 PE=4 SV=1
77 : F1QY90_DANRE 0.49 0.75 4 99 560 655 97 2 2 655 F1QY90 Uncharacterized protein OS=Danio rerio GN=thoc1 PE=4 SV=1
78 : G3PZA5_GASAC 0.49 0.75 4 104 559 659 101 0 0 659 G3PZA5 Uncharacterized protein OS=Gasterosteus aculeatus PE=4 SV=1
79 : Q7SYB2_DANRE 0.49 0.75 4 99 560 655 97 2 2 655 Q7SYB2 THO complex 1 OS=Danio rerio GN=thoc1 PE=2 SV=1
80 : C3Y1Y4_BRAFL 0.39 0.68 3 104 460 561 102 0 0 561 C3Y1Y4 Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_126015 PE=4 SV=1
81 : W4XA89_STRPU 0.35 0.60 5 103 431 529 99 0 0 559 W4XA89 Uncharacterized protein OS=Strongylocentrotus purpuratus GN=Sp-Tho1 PE=4 SV=1
82 : W4XVC5_STRPU 0.35 0.61 5 103 360 458 99 0 0 488 W4XVC5 Uncharacterized protein (Fragment) OS=Strongylocentrotus purpuratus GN=Sp-Tho1L PE=4 SV=1
83 : J3S5E0_CROAD 0.33 0.58 18 96 217 304 88 3 9 313 J3S5E0 Tumor necrosis factor receptor type 1-associated DEATH domain protein-like OS=Crotalus adamanteus PE=2 SV=1
84 : C3XSQ3_BRAFL 0.32 0.61 3 96 1064 1157 95 2 2 1493 C3XSQ3 Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_74750 PE=4 SV=1
85 : E4WVZ4_OIKDI 0.32 0.63 2 96 546 641 98 3 5 648 E4WVZ4 Whole genome shotgun assembly, reference scaffold set, scaffold scaffold_3 OS=Oikopleura dioica GN=GSOID_T00009053001 PE=4 SV=1
86 : F6YLU1_XENTR 0.32 0.58 15 103 206 301 96 2 7 303 F6YLU1 Uncharacterized protein OS=Xenopus tropicalis GN=tradd PE=4 SV=1
87 : TRADD_XENLA 0.31 0.58 14 103 205 301 97 2 7 303 Q32NG6 Tumor necrosis factor receptor type 1-associated DEATH domain protein OS=Xenopus laevis GN=tradd PE=2 SV=2
88 : H3B6L3_LATCH 0.30 0.57 14 105 213 311 99 2 7 313 H3B6L3 Uncharacterized protein (Fragment) OS=Latimeria chalumnae PE=4 SV=1
## ALIGNMENTS 1 - 70
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A G 0 0 132 1 0
2 2 A S - 0 0 132 2 73
3 3 A S + 0 0 131 28 59 D K KK N E EEE E EEEEEEENE NENNN
4 4 A G - 0 0 66 80 42 EEEEEEEEEEEEEEEEEEEEEEEEEEENEEEEEEEEEEE NENNN NENNNNNNNNNEENNNNNEDDDD
5 5 A S - 0 0 123 82 59 NNNNNNNNNNNNNNNNNNNNNNNHNNNXNNNNNNNNNSNSNNNNS NNNNNNNNNENSSENEEESSSSS
6 6 A S + 0 0 130 84 49 EEEEEEEEEEEEEEEEEEEEEEEEEEEEXEEEEEEEEEKEEEEEEEEEEEEEEEEETENNSESSSNNNNN
7 7 A G - 0 0 63 84 63 SSSSSSSSSSSSSSSSSSSSSSSSSSSSXSSSSSSSSSSSSSSSSSSSSSSSSSSSGSEEPSPPPEDDDD
8 8 A P - 0 0 117 85 58 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPSSAPAAASSSSS
9 9 A D + 0 0 139 85 62 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDGDDDGDDEEEDEDEEEPPEEEEEPPPPP
10 10 A V + 0 0 100 85 81 VVVVVVVVVVVVVVVVVVVVVVVVVVAVVVAAVVVVVVVVAVVVVVVVVAAVVVVVVVDDVIEEEDSSSS
11 11 A R + 0 0 154 85 86 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRWRRRWQRQQQQQQQQQMMQHQQQVMIII
12 12 A R S S+ 0 0 180 85 63 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRLGLLRRRQRRRRRRRRRQQQHQQQQQQQQ
13 13 A D S S+ 0 0 120 85 56 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDNNQHKKKHNSSN
14 14 A K S S- 0 0 154 87 34 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKKKKLLLKKKKK
15 15 A P - 0 0 37 88 68 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPAAALPLPAALLLPSSSLMLTM
16 16 A V - 0 0 5 88 25 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVLIVVVVAVVMVVIMMMVMVMLLVVSVMMMVVVVV
17 17 A T >> - 0 0 75 88 19 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTMTTTTTSTTT
18 18 A G H 3> S+ 0 0 40 88 55 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG.GGGGGGGGGGGGGGGGGSGSSSNNNNN
19 19 A E H 3> S+ 0 0 147 89 39 EEEEEEEEEEEEEEEEEDEDEDDEEEEEEEEEEEDEEEEEEDEDDEEEEEEEEEEEDDEEEDEEEQQQHQ
20 20 A Q H <> S+ 0 0 79 89 17 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQQQQQQQQQQQQQQQQQQQQQ
21 21 A I H X S+ 0 0 4 89 41 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIMIMMMIIIIIIIMMMMM
22 22 A E H X S+ 0 0 80 89 34 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDDEEEEEEEEEEEEEEEEEEEEDDDDD
23 23 A V H X S+ 0 0 59 89 90 VVVVVVVVVVVVVVVVVVVVVVVIVAIVATIIIVVLSSLILLVLLSILSSSSLAQAIILLSSSSSDDDDD
24 24 A F H X S+ 0 0 1 89 37 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFYYFFFLFFFFFFFLLLLFLFFFIVVIV
25 25 A A H X S+ 0 0 4 89 9 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAAAAAAAAAAAAAAAAAAAA
26 26 A N H < S+ 0 0 88 89 70 NNNNNNNNNNNNNNNSSNSNSNNNTSNNSNNNNNSNNNNSNNNNNNNINNSNNIYISSNNNINNNSAAAA
27 27 A K H < S+ 0 0 67 89 32 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRRRRRNRRRSSKKKKKKKKKK
28 28 A L H >< S+ 0 0 1 89 13 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
29 29 A G T 3< S- 0 0 15 89 8 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGSGGGSGDGGGGGGGGGGGGQGGGGGGGG
30 30 A E T > S+ 0 0 126 89 54 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAASA
31 31 A Q T X> + 0 0 51 89 56 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHQQHQQQQQQQQQYHYHHHEEHKHHHQRQQR
32 32 A W H 3> S+ 0 0 4 89 0 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
33 33 A K H <4 S+ 0 0 86 89 10 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRRRKKKKKKKKKKKK
34 34 A I H <4 S+ 0 0 56 89 81 IIIIIIIIIIIIIIIIIVIIIVVIIIIVIIIIIIIIIIIIIIIIITIIIAAAVAVAAATTTRTTTTSNTT
35 35 A L H X S+ 0 0 0 89 7 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
36 36 A A T ><>S+ 0 0 0 89 8 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
37 37 A P T 345S+ 0 0 80 88 56 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPLPPPPPPPPPPPPPPPPPPPPPPGTSST
38 38 A Y T 345S+ 0 0 86 88 57 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYHYYYYYYHFYYYYYHYYYYYYYCYYYHHHHYYYQHHHH
39 39 A L T <<5S- 0 0 6 89 22 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLFFLLLLLLLLLL
40 40 A E T 5 + 0 0 151 89 23 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEDDDEEEEE
41 41 A M < - 0 0 28 89 20 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMIIIIMMMMMMMMMIMMMMMMMMMMMMMMMMMMMMM
42 42 A K > - 0 0 157 89 29 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRRKSKKKKKKKK
43 43 A D H > S+ 0 0 112 89 41 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDEDDEDDDDDENDDDAAAAA
44 44 A S H > S+ 0 0 87 89 67 SSSSSSSSSSSSASSSSSSSSSSSSSSSSSSSSSSSSSSSPSSSSSSSSSSSSSSSSSSSMSLLLVAAAA
45 45 A E H > S+ 0 0 61 89 29 EEEEEEEEEEEEEEEEEEEEEEEEEEDEEEEEEEEEDDEEDDEDDDEDDDDDDDDDDDDDDDDDDEEEEE
46 46 A I H X S+ 0 0 24 89 25 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIISIIIIIIIIIIIIIIIIIIVLLML
47 47 A R H X S+ 0 0 184 89 38 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRKRRRRWRRRRRRRRRRRRRkGkkkRRRRR
48 48 A Q H >X S+ 0 0 102 82 52 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQGG.E...EEEEE
49 49 A I H 3X S+ 0 0 2 89 12 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIiIiiiIIIII
50 50 A E H 3< S+ 0 0 65 89 13 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEEEEEEEEEEEEEEEEEEEE
51 51 A C H << S+ 0 0 107 89 73 CCCCCCCCCCCCCCCCCCCCCCCCCCCGCCCCCCCCCCCCSSCSSSCSCLSLSASASSCCSSSSSTTTTT
52 52 A D H < S+ 0 0 102 89 13 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDYDDDDDDDDDDDDDDDDDDDDD
53 53 A S < - 0 0 16 89 35 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSTTTSSSSS
54 54 A E S S+ 0 0 159 89 17 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEDEEEEEDEEEEEEEE
55 55 A D S > S- 0 0 112 89 10 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
56 56 A M H > S+ 0 0 74 89 55 MMMMMMMMMMMMMMMMMMMMMMMVMMMMMMVMMVVVMMMMVVIVVVMVMVMVLVVVVVVVALAAAVVVVV
57 57 A K H > S+ 0 0 125 89 64 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKKKKKKKKKRKKKKKKRRKKKRKKKEDDDD
58 58 A M H > S+ 0 0 80 89 41 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMKMMMMMMMMMMMMMMMMMMMVM
59 59 A R H X S+ 0 0 27 89 43 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRSRRRRRRRRRRRRRRRRRRRRRRRRRRQQQQQ
60 60 A A H X S+ 0 0 0 89 9 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
61 61 A K H X S+ 0 0 90 89 36 KKKKKKKKKKKKKKKKKKKKKKKRKKRKKRRRRKKKKKKRKKKKKKRKKKKKKKKKKKKKKKKKKKKKKK
62 62 A Q H X S+ 0 0 50 89 64 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQLLLLLLLLLLLL
63 63 A L H X S+ 0 0 0 89 6 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
64 64 A L H X S+ 0 0 1 89 2 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
65 65 A V H X S+ 0 0 42 89 41 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVLVLLLVVVVV
66 66 A A H X S+ 0 0 26 89 42 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAAAATATAAAAAAGGGGAAAAA
67 67 A W H X S+ 0 0 13 89 2 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
68 68 A Q H X S+ 0 0 40 89 17 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQKQQQQQQQQQQQQQQQQQQQQQ
69 69 A D H < S+ 0 0 131 89 10 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDNDDDDDDDDDDDDDDDDDEDEEEDDDED
70 70 A Q H < S+ 0 0 92 89 59 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQRRRRRRRRRRRR
71 71 A E H >< S- 0 0 90 89 5 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
72 72 A G G >< - 0 0 31 89 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
73 73 A V G 3 S+ 0 0 107 89 82 VVVVVVVVVVVVVVVVVVVVVVVVVVVIVVVVIAAAVVAIIIVIIIIIVPAAIAIAAALLGAGGGSNTST
74 74 A H G < + 0 0 121 89 51 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHQQHHQQQQQQQQ
75 75 A A < + 0 0 0 89 10 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAVAEAAAAAASAAAAAAAAAAAAAA
76 76 A T > - 0 0 25 89 16 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTNNNTTTTT
77 77 A P H > S+ 0 0 11 89 78 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPATTTTPPPPPPPPPTPPPMPMPAAVVLQIIIVVVVV
78 78 A E H > S+ 0 0 80 89 21 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEEDDDDDEEEEEENEDEDEEEEEEEEEEEEEEEEEED
79 79 A N H > S+ 0 0 72 89 52 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNNNNNNNNNNNNNNNNNNNNNNNNNNNNIIINNNNN
80 80 A L H X S+ 0 0 1 89 10 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLCCLLLLLLLLLL
81 81 A I H X S+ 0 0 21 89 38 IIIIIIIIIIIIIMMMMIMIMIIIIMIIMIIIIIIIIIIIIIIIIIIIIIIIIIIIIIVVIAIIIVAVAA
82 82 A N H X S+ 0 0 88 89 74 NNNNNNNNNNNNNNNNNNNSNNNNSNNNNNNNSSNSGSSNTNNNNTNTGTATTTTTSSSSSSSSSLAATA
83 83 A A H X S+ 0 0 11 89 10 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAASAAAAAAAAAAAAAAAAAAGAAAA
84 84 A L H <>S+ 0 0 0 89 2 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLVLMLLLLLLVLLLLLLLLLLLLLLL
85 85 A N H ><5S+ 0 0 93 89 50 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNHNNNNNNNNNNNNNNNNNNNTSSNSNSSSIININNNNNNSN
86 86 A K H 3<5S+ 0 0 151 89 72 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKSSSNSSSAVASV
87 87 A S T 3<5S- 0 0 12 89 56 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSAWASAAAAAAAAAAAAAAAAAATAA
88 88 A G T < 5S+ 0 0 55 89 8 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGG
89 89 A L >>< + 0 0 9 89 10 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLFFFFF
90 90 A S H 3> + 0 0 73 89 60 SSSSSSSSSSSSSSSSSSSSSSSSNSSNSSSSSSSSSSSGSSSSSSSSSGSGNGNGAANNNGNNNISSSS
91 91 A D H 3> S+ 0 0 106 89 43 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDEDDDQQEEEEEKQQQQ
92 92 A L H <> S+ 0 0 4 89 24 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLFLLLIMILI
93 93 A A H X S+ 0 0 5 89 18 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAVAAAAAAAAAAAASAAATAAAAASAAAAAAAAAAAAAAAAA
94 94 A E H X S+ 0 0 107 89 27 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEENNEEEEEEEDEE
95 95 A S H < S+ 0 0 31 89 61 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSIISSNNNSTGRN
96 96 A L H < S+ 0 0 29 89 10 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLFLLLLLLLLILLLLLLLLL
97 97 A T H < S- 0 0 67 86 64 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTMTTATSTTTSSTTTTTTTTSSSS
98 98 A N < + 0 0 105 83 48 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGNNNE EE
99 99 A D - 0 0 76 80 46 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDEEDDDDD A
100 100 A N - 0 0 87 76 68 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSTTTNSTNTTTNTTTTTSTSTAAIISTSSS
101 101 A E S S- 0 0 182 75 20 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEDEEEEEEEEE
102 102 A T S S+ 0 0 111 75 69 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTTNTNTGGGNSNTGGNNNNNNN
103 103 A N + 0 0 155 75 64 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNNNNNSSNSSSNSNSSSISNGSSIIGSGGG
104 104 A S S S- 0 0 83 68 21 SSSSSSSSSSSSSSSSSSSSSSSSSSSS SSSSSSSSSSSSS SSSSSSSSSSSGSSSSSSTSSS
105 105 A S - 0 0 110 2 60
106 106 A G - 0 0 61 1 0
107 107 A P - 0 0 116 1 0
108 108 A S - 0 0 116 1 0
109 109 A S 0 0 128 1 0
110 110 A G 0 0 130 1 0
## ALIGNMENTS 71 - 88
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....8....:....9....:....0....:....1....:....2....:....3....:....4
1 1 A G 0 0 132 1 0
2 2 A S - 0 0 132 2 73 P
3 3 A S + 0 0 131 28 59 D SP
4 4 A G - 0 0 66 80 42 DEDDDDDDDE SQ
5 5 A S - 0 0 123 82 59 SSSSSSSSSKEE SE
6 6 A S + 0 0 130 84 49 NNNNNNNNNKEE QE
7 7 A G - 0 0 63 84 63 DDDDDDDDDPGG VA
8 8 A P - 0 0 117 85 58 SSSSSSSSSDMM PE
9 9 A D + 0 0 139 85 62 PKPPPPPPPSDD RA
10 10 A V + 0 0 100 85 81 SFSSSSSSSPKK QP
11 11 A R + 0 0 154 85 86 IAMMIIIIIQSS EV
12 12 A R S S+ 0 0 180 85 63 QNQQQQQQQGPP QS
13 13 A D S S+ 0 0 120 85 56 SSNNNSSSSASS ND
14 14 A K S S- 0 0 154 87 34 KKKKKKKKKPAA RG RR
15 15 A P - 0 0 37 88 68 MAMMMLAMAPAA PKPPP
16 16 A V - 0 0 5 88 25 VVVVVVVVVLVV VVLLL
17 17 A T >> - 0 0 75 88 19 STSSTTTSTTTT VTTTT
18 18 A G H 3> S+ 0 0 40 88 55 NNNNNNNNNQEEARSSSA
19 19 A E H 3> S+ 0 0 147 89 39 QQQQQQSQSEEEDDDTAK
20 20 A Q H <> S+ 0 0 79 89 17 QQQQQQQQQHQQDLQHHD
21 21 A I H X S+ 0 0 4 89 41 MMMMMMMMMIFFHFIIIH
22 22 A E H X S+ 0 0 80 89 34 DDDDDDDDDDTTQIDQQQ
23 23 A V H X S+ 0 0 59 89 90 DDDDDDEDEVLLKYKHHA
24 24 A F H X S+ 0 0 1 89 37 IIVVVVIIILVVFILFFF
25 25 A A H X S+ 0 0 4 89 9 AAAAAAAAAAAAAKSAAA
26 26 A N H < S+ 0 0 88 89 70 AAAAAAAAAESSKRTKKT
27 27 A K H < S+ 0 0 67 89 32 KKKKKKKKKKKKLKESSL
28 28 A L H >< S+ 0 0 1 89 13 LLLLLLLLLLIIVVLVVV
29 29 A G T 3< S- 0 0 15 89 8 GGGGGGGGGGGGSGGGGG
30 30 A E T > S+ 0 0 126 89 54 AAAAAASASADDKMERKR
31 31 A Q T X> + 0 0 51 89 56 QRRRRQQQQDSSKKKNNS
32 32 A W H 3> S+ 0 0 4 89 0 WWWWWWWWWWWWWWWWWW
33 33 A K H <4 S+ 0 0 86 89 10 KKKKKKKKKKQQKKKKKK
34 34 A I H <4 S+ 0 0 56 89 81 TMSSTNTTTKTTQDDLPK
35 35 A L H X S+ 0 0 0 89 7 LLLLLLLLLLLLVLLVVV
36 36 A A T ><>S+ 0 0 0 89 8 AAAAAAAAAAAAgAAggg
37 37 A P T 345S+ 0 0 80 88 56 PSTTTSDPDPVVlF.ttd
38 38 A Y T 345S+ 0 0 86 88 57 HHHHHHHHHHEEYF.CCC
39 39 A L T <<5S- 0 0 6 89 22 LLLLLLLLLLLLLLERRR
40 40 A E T 5 + 0 0 151 89 23 EEEEEEEEEDGGQDEAAA
41 41 A M < - 0 0 28 89 20 MMMMMMMMMFFFTFLLLL
42 42 A K > - 0 0 157 89 29 KKKKKKSKSKSSKDRNNR
43 43 A D H > S+ 0 0 112 89 41 AAAAAADADGDDCGHDDD
44 44 A S H > S+ 0 0 87 89 67 AAAAAAKAKADDRAITTP
45 45 A E H > S+ 0 0 61 89 29 EEEEEEEEEEEEAETAAT
46 46 A I H X S+ 0 0 24 89 25 LLLLLLILIIVVLISIII
47 47 A R H X S+ 0 0 184 89 38 RRRRRRrRrTTTrekEEE
48 48 A Q H >X S+ 0 0 102 82 52 EEEEEE.E.AAAn.knnn
49 49 A I H 3X S+ 0 0 2 89 12 IIIIIIiIiIIIiifyyf
50 50 A E H 3< S+ 0 0 65 89 13 EEEEEEEEEELLEDEEEE
51 51 A C H << S+ 0 0 107 89 73 TTTTTTSTSGSSYDEFFF
52 52 A D H < S+ 0 0 102 89 13 DDDDDDDDDDKEDRDDDE
53 53 A S < - 0 0 16 89 35 SSSSSSSSSSTTRNARRR
54 54 A E S S+ 0 0 159 89 17 EEEEEEEEENSSEREEDE
55 55 A D S > S- 0 0 112 89 10 DDDDDDDDDEDDGDDGGG
56 56 A M H > S+ 0 0 74 89 55 VVVVVVVVVMIILCDRRL
57 57 A K H > S+ 0 0 125 89 64 DEDDDDDDDNKKYEAYYY
58 58 A M H > S+ 0 0 80 89 41 MMMMMMLMLTEEESVEEE
59 59 A R H X S+ 0 0 27 89 43 QQQQQQQQQQQQQRRQQQ
60 60 A A H X S+ 0 0 0 89 9 AAAAAAAAAATTACAAAA
61 61 A K H X S+ 0 0 90 89 36 KKKKKKKKKTKKYMRYYY
62 62 A Q H X S+ 0 0 50 89 64 LLLLLLMLMQLLQDIQQQ
63 63 A L H X S+ 0 0 0 89 6 LLLLLLLLLLMMMMALLL
64 64 A L H X S+ 0 0 1 89 2 LLLLLLLLLLLLLLLLLI
65 65 A V H X S+ 0 0 42 89 41 VVVVVVVVVVQQRECRRQ
66 66 A A H X S+ 0 0 26 89 42 AAAAAAAAATQQRQTLLK
67 67 A W H X S+ 0 0 13 89 2 WWWWWWWWWWWWYWWFFF
68 68 A Q H X S+ 0 0 40 89 17 QQQQQQQQQQQQIHQKKK
69 69 A D H < S+ 0 0 131 89 10 DDDDDDDDDDDDDGDDDQ
70 70 A Q H < S+ 0 0 92 89 59 RRRRRRRRRRKKSRKSSA
71 71 A E H >< S- 0 0 90 89 5 EEEEEEEEEEEEEQNEEE
72 72 A G G >< - 0 0 31 89 0 GGGGGGGGGGGGGGGGGG
73 73 A V G 3 S+ 0 0 107 89 82 TTNNTTSTSPAAKAAKKK
74 74 A H G < + 0 0 121 89 51 QQQQQQQQQREEKFEKKK
75 75 A A < + 0 0 0 89 10 AAAAAAAAAAPPAAAAAA
76 76 A T > - 0 0 25 89 16 TTTTTTTTTTSSTTTTTT
77 77 A P H > S+ 0 0 11 89 78 VVVVVVMVMVRRVISVVL
78 78 A E H > S+ 0 0 80 89 21 EEEEDEEEEDEEQEVQQG
79 79 A N H > S+ 0 0 72 89 52 SSNNNNSSSITTNIVRRR
80 80 A L H X S+ 0 0 1 89 10 LLLLLLLLLILLLLLLLL
81 81 A I H X S+ 0 0 21 89 38 VVAAAVVVVMIIVLMVVI
82 82 A N H X S+ 0 0 88 89 74 ATAAAATATTAAAREQQE
83 83 A A H X S+ 0 0 11 89 10 AAAAAAAAAAGGAATAAA
84 84 A L H <>S+ 0 0 0 89 2 LLLLLLLLLLLLLLLLLL
85 85 A N H ><5S+ 0 0 93 89 50 NNNNNNNNNEMMESREEQ
86 86 A K H 3<5S+ 0 0 151 89 72 TAVVVAATADEEDKAEED
87 87 A S T 3<5S- 0 0 12 89 56 AAAAATAAAASSNAINNS
88 88 A G T < 5S+ 0 0 55 89 8 GGGGGGGGGGGGGGGGGK
89 89 A L >>< + 0 0 9 89 10 FFFFFFFFFMLLLILLLL
90 90 A S H 3> + 0 0 73 89 60 ASSSSSNANQDDIQDNNQ
91 91 A D H 3> S+ 0 0 106 89 43 QQQQQQNQNEDDSDESSS
92 92 A L H <> S+ 0 0 4 89 24 FIMMIIIFIIIILVIIIL
93 93 A A H X S+ 0 0 5 89 18 AAAAAAAAASVVAVAAAA
94 94 A E H X S+ 0 0 107 89 27 DDEEEDDDDDEEEDNFLD
95 95 A S H < S+ 0 0 31 89 61 VITTNGNVNVSSEGNDDE
96 96 A L H < S+ 0 0 29 89 10 LLLLLLLLLVVVILVLLL
97 97 A T H < S- 0 0 67 86 64 SSSSSKSKSFFF LLM
98 98 A N < + 0 0 105 83 48 E EEEREREGTM SSN
99 99 A D - 0 0 76 80 46 EGGTTTTEEE LLP
100 100 A N - 0 0 87 76 68 SN S S GKK NNQ
101 101 A E S S- 0 0 182 75 20 K S S EQQ EEE
102 102 A T S S+ 0 0 111 75 69 T V V EKK NNQ
103 103 A N + 0 0 155 75 64 P N N AKK GGN
104 104 A S S S- 0 0 83 68 21 T T S G
105 105 A S - 0 0 110 2 60 G
106 106 A G - 0 0 61 1 0
107 107 A P - 0 0 116 1 0
108 108 A S - 0 0 116 1 0
109 109 A S 0 0 128 1 0
110 110 A G 0 0 130 1 0
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
2 2 A 0 0 0 0 0 0 0 0 0 50 50 0 0 0 0 0 0 0 0 0 2 0 0 0.693 23 0.27
3 3 A 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 11 0 50 21 7 28 0 0 1.412 47 0.41
4 4 A 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 1 56 25 15 80 0 0 1.119 37 0.58
5 5 A 0 0 0 0 0 0 0 0 0 0 26 0 0 1 0 1 0 10 62 0 82 0 0 0.979 32 0.40
6 6 A 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 2 1 70 19 0 84 0 0 0.926 30 0.50
7 7 A 1 0 0 0 0 0 0 5 1 6 68 0 0 0 0 0 0 4 0 15 84 0 0 1.089 36 0.36
8 8 A 0 0 0 2 0 0 0 0 5 72 19 0 0 0 0 0 0 1 0 1 85 0 0 0.889 29 0.42
9 9 A 0 0 0 0 0 0 0 2 1 18 1 0 0 0 1 1 0 14 0 61 85 0 0 1.180 39 0.38
10 10 A 64 0 1 0 1 0 0 0 7 2 14 0 0 0 0 2 1 4 0 4 85 0 0 1.321 44 0.18
11 11 A 2 0 11 6 0 2 0 0 1 0 2 0 0 1 55 0 18 1 0 0 85 0 0 1.460 48 0.13
12 12 A 0 4 0 0 0 0 0 2 0 2 1 0 0 1 64 0 25 0 1 0 85 0 0 1.085 36 0.37
13 13 A 0 0 0 0 0 0 0 0 1 0 12 0 0 2 0 4 1 0 9 71 85 0 0 1.031 34 0.44
14 14 A 0 3 0 0 0 0 0 1 2 1 0 0 0 0 3 87 0 0 1 0 87 0 0 0.591 19 0.65
15 15 A 0 9 0 8 0 0 0 0 11 66 3 1 0 0 0 1 0 0 0 0 88 0 0 1.158 38 0.32
16 16 A 77 8 2 10 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 88 0 0 0.822 27 0.75
17 17 A 1 0 0 1 0 0 0 0 0 0 6 92 0 0 0 0 0 0 0 0 88 1 0 0.341 11 0.81
18 18 A 0 0 0 0 0 0 0 69 2 0 8 0 0 0 1 0 1 2 16 0 88 0 0 1.022 34 0.44
19 19 A 0 0 0 0 0 0 0 0 1 0 2 1 0 1 0 1 12 65 0 16 89 0 0 1.115 37 0.60
20 20 A 0 1 0 0 0 0 0 0 0 0 0 0 0 3 1 0 92 0 0 2 89 0 0 0.376 12 0.83
21 21 A 0 0 74 20 3 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 89 0 0 0.745 24 0.59
22 22 A 0 0 1 0 0 0 0 0 0 0 0 2 0 0 0 0 4 72 0 20 89 0 0 0.836 27 0.66
23 23 A 34 13 10 0 0 0 1 0 6 0 13 1 0 2 0 2 1 2 0 13 89 0 0 1.978 66 0.09
24 24 A 10 9 9 0 70 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 89 0 0 1.002 33 0.62
25 25 A 0 0 0 0 0 0 0 0 97 0 1 1 0 0 0 1 0 0 0 0 89 0 0 0.184 6 0.91
26 26 A 0 0 4 0 0 0 1 0 15 0 16 3 0 0 1 3 0 1 55 0 89 0 0 1.420 47 0.29
27 27 A 0 2 0 0 0 0 0 0 0 0 4 0 0 0 9 82 0 1 1 0 89 0 0 0.705 23 0.67
28 28 A 6 92 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 89 0 0 0.323 10 0.87
29 29 A 0 0 0 0 0 0 0 94 0 0 3 0 0 0 0 0 1 0 0 1 89 0 0 0.270 9 0.92
30 30 A 0 0 0 1 0 0 0 0 13 0 3 0 0 0 2 2 0 75 0 2 89 0 0 0.905 30 0.45
31 31 A 0 0 0 0 0 0 2 0 0 0 3 0 0 11 7 4 66 2 2 1 89 0 0 1.260 42 0.43
32 32 A 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 89 0 0 0.000 0 1.00
33 33 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 93 2 0 0 0 89 0 0 0.290 9 0.90
34 34 A 7 1 51 1 0 0 0 0 8 1 3 19 0 0 1 2 1 0 2 2 89 0 0 1.665 55 0.18
35 35 A 4 96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 89 0 0 0.183 6 0.92
36 36 A 0 0 0 0 0 0 0 4 96 0 0 0 0 0 0 0 0 0 0 0 89 1 4 0.183 6 0.91
37 37 A 2 2 0 0 1 0 0 1 0 77 5 8 0 0 0 0 0 0 0 3 88 0 0 0.930 31 0.44
38 38 A 0 0 0 0 2 0 66 0 0 0 0 0 5 24 0 0 1 2 0 0 88 0 0 0.980 32 0.43
39 39 A 0 93 0 0 2 0 0 0 0 0 0 0 0 0 3 0 0 1 0 0 89 0 0 0.315 10 0.78
40 40 A 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 1 87 0 7 89 0 0 0.557 18 0.77
41 41 A 0 4 6 84 4 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 89 0 0 0.635 21 0.79
42 42 A 0 0 0 0 0 0 0 0 0 0 6 0 0 0 4 87 0 0 2 1 89 0 0 0.562 18 0.71
43 43 A 0 0 0 0 0 0 0 2 13 0 0 0 1 1 0 0 0 3 1 78 89 0 0 0.818 27 0.58
44 44 A 1 3 1 1 0 0 0 0 16 2 67 2 0 0 1 2 0 0 0 2 89 0 0 1.214 40 0.33
45 45 A 0 0 0 0 0 0 0 0 3 0 0 2 0 0 0 0 0 65 0 29 89 0 0 0.838 27 0.70
46 46 A 3 12 81 1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 89 0 0 0.680 22 0.74
47 47 A 0 0 0 0 0 1 0 1 0 0 0 3 0 0 83 7 0 4 0 0 89 7 2 0.690 23 0.61
48 48 A 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 1 72 16 5 0 82 0 5 0.942 31 0.48
49 49 A 0 0 96 0 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 89 0 0 0.215 7 0.88
50 50 A 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 96 0 1 89 0 0 0.230 7 0.87
51 51 A 0 2 0 0 3 0 1 2 2 0 22 13 51 0 0 0 0 1 0 1 89 0 0 1.472 49 0.27
52 52 A 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 1 0 2 0 94 89 0 0 0.291 9 0.87
53 53 A 0 0 0 0 0 0 0 0 1 0 87 7 0 0 4 0 0 0 1 0 89 0 0 0.547 18 0.64
54 54 A 0 0 0 0 0 0 0 0 0 0 2 0 0 0 1 0 0 91 1 4 89 0 0 0.411 13 0.82
55 55 A 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1 0 94 89 0 0 0.244 8 0.90
56 56 A 38 4 3 45 0 0 0 0 4 0 0 0 1 0 2 0 0 0 0 1 89 0 0 1.306 43 0.45
57 57 A 0 0 0 0 0 0 4 0 1 0 0 0 0 0 6 71 0 3 1 13 89 0 0 1.031 34 0.36
58 58 A 2 2 0 85 0 0 0 0 0 0 1 1 0 0 0 1 0 7 0 0 89 0 0 0.639 21 0.58
59 59 A 0 0 0 0 0 0 0 0 0 0 1 0 0 0 75 0 24 0 0 0 89 0 0 0.605 20 0.56
60 60 A 0 0 0 0 0 0 0 0 97 0 0 2 1 0 0 0 0 0 0 0 89 0 0 0.169 5 0.90
61 61 A 0 0 0 1 0 0 4 0 0 0 0 1 0 0 10 83 0 0 0 0 89 0 0 0.625 20 0.63
62 62 A 0 24 1 2 0 0 0 0 0 0 0 0 0 0 0 0 72 0 0 1 89 0 0 0.764 25 0.35
63 63 A 0 94 0 4 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 89 0 0 0.244 8 0.93
64 64 A 0 99 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 89 0 0 0.062 2 0.98
65 65 A 87 4 0 0 0 0 0 0 0 0 0 0 1 0 3 0 3 1 0 0 89 0 0 0.594 19 0.59
66 66 A 0 2 0 0 0 0 0 4 82 0 0 6 0 0 1 1 3 0 0 0 89 0 0 0.764 25 0.58
67 67 A 0 0 0 0 3 96 1 0 0 0 0 0 0 0 0 0 0 0 0 0 89 0 0 0.209 6 0.97
68 68 A 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 4 93 0 0 0 89 0 0 0.305 10 0.82
69 69 A 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 6 1 91 89 0 0 0.399 13 0.90
70 70 A 0 0 0 0 0 0 0 0 1 0 3 0 0 0 26 3 66 0 0 0 89 0 0 0.901 30 0.40
71 71 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 98 1 0 89 0 0 0.123 4 0.95
72 72 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 89 0 0 0.000 0 1.00
73 73 A 40 2 13 0 0 0 0 4 17 2 4 8 0 0 0 4 0 0 3 0 89 0 0 1.840 61 0.17
74 74 A 0 0 0 0 1 0 0 0 0 0 0 0 0 69 1 4 21 3 0 0 89 0 0 0.943 31 0.48
75 75 A 1 0 0 0 0 0 0 0 94 2 1 0 0 0 0 0 0 1 0 0 89 0 0 0.291 9 0.89
76 76 A 0 0 0 0 0 0 0 0 0 0 2 93 0 0 0 0 0 0 4 0 89 0 0 0.290 9 0.84
77 77 A 20 2 4 4 0 0 0 0 3 55 1 6 0 0 2 0 1 0 0 0 89 0 0 1.478 49 0.21
78 78 A 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 3 81 1 12 89 0 0 0.695 23 0.78
79 79 A 1 0 6 0 0 0 0 0 0 0 6 3 0 0 3 0 0 0 81 0 89 0 0 0.774 25 0.48
80 80 A 0 97 1 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 89 0 0 0.169 5 0.90
81 81 A 15 1 65 11 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 89 0 0 1.056 35 0.61
82 82 A 0 1 0 0 0 0 0 2 15 0 18 16 0 0 1 0 2 2 43 0 89 0 0 1.601 53 0.26
83 83 A 0 0 0 0 0 0 0 3 94 0 1 1 0 0 0 0 0 0 0 0 89 0 0 0.270 9 0.90
84 84 A 2 97 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 89 0 0 0.169 5 0.98
85 85 A 0 0 3 2 0 0 0 0 0 0 9 1 0 1 1 0 1 4 76 0 89 0 0 0.963 32 0.50
86 86 A 6 0 0 0 0 0 0 0 8 0 8 2 0 0 0 67 0 4 1 3 89 0 0 1.217 40 0.27
87 87 A 0 0 1 0 0 1 0 0 36 0 56 2 0 0 0 0 0 0 3 0 89 0 0 0.992 33 0.43
88 88 A 0 0 0 0 0 0 0 97 0 0 0 0 0 0 1 1 0 1 0 0 89 0 0 0.184 6 0.92
89 89 A 0 82 1 1 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 89 0 0 0.554 18 0.89
90 90 A 0 0 2 0 0 0 0 7 4 0 64 0 0 0 0 0 3 0 16 3 89 0 0 1.211 40 0.40
91 91 A 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 1 15 9 2 69 89 0 0 1.032 34 0.57
92 92 A 1 76 16 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 89 0 0 0.776 25 0.76
93 93 A 4 0 0 0 0 0 0 0 91 0 3 1 0 0 0 0 0 0 0 0 89 0 0 0.390 13 0.81
94 94 A 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 83 3 11 89 0 0 0.614 20 0.73
95 95 A 3 0 3 0 0 0 0 3 0 0 72 3 0 0 1 0 0 2 9 2 89 0 0 1.132 37 0.39
96 96 A 4 92 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 89 0 0 0.351 11 0.89
97 97 A 0 2 0 2 3 0 0 0 1 0 16 72 0 0 0 2 0 0 0 0 86 0 0 0.963 32 0.36
98 98 A 0 0 0 1 0 0 0 2 0 0 2 1 0 0 2 0 0 11 80 0 83 0 0 0.799 26 0.52
99 99 A 0 3 0 0 0 0 0 3 1 1 0 5 0 0 0 0 0 8 0 80 80 0 0 0.817 27 0.54
100 100 A 0 0 3 0 0 0 0 1 3 0 14 20 0 0 0 3 1 0 55 0 76 0 0 1.329 44 0.31
101 101 A 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 1 3 91 0 3 75 0 0 0.436 14 0.79
102 102 A 3 0 0 0 0 0 0 7 1 0 1 65 0 0 0 3 1 1 17 0 75 0 0 1.186 39 0.31
103 103 A 0 0 4 0 0 0 0 9 1 1 19 0 0 0 0 3 0 0 63 0 75 0 0 1.168 38 0.36
104 104 A 0 0 0 0 0 0 0 3 0 0 93 4 0 0 0 0 0 0 0 0 68 0 0 0.312 10 0.79
105 105 A 0 0 0 0 0 0 0 50 0 0 50 0 0 0 0 0 0 0 0 0 2 0 0 0.693 23 0.40
106 106 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
107 107 A 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
108 108 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
109 109 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
110 110 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
61 46 619 1 kVi
63 46 598 1 kMi
64 46 603 1 kMi
65 46 603 1 kMi
77 45 604 1 rVi
79 45 604 1 rVi
83 20 236 2 gRSl
83 31 249 5 rDPFIDn
83 32 255 2 nLAi
84 46 1109 1 eTi
85 45 590 2 kDIk
85 46 593 1 kTf
86 23 228 5 gRSLGKt
86 35 245 2 nLAy
87 24 228 5 gRSLGKt
87 36 245 2 nLAy
88 24 236 5 gRSLAKd
88 36 253 2 nIAf
//