Complet list of 1wif hssp file
Complete list of 1wif.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1WIF
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-12
HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 28-MAY-04 1WIF
COMPND MOL_ID: 1; MOLECULE: RIKEN CDNA 4930408O21; CHAIN: A; FRAGMENT: PDZ DO
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: MUS MUSCULUS; ORGANISM_COMMON: HOUSE M
AUTHOR W.OHASHI,T.YAMAZAKI,H.HIROTA,T.TOMIZAWA,S.KOSHIBA,T.KIGAWA, S.YOKOYAMA
DBREF 1WIF A 8 120 UNP Q9CR71 Q9CR71_MOUSE 8 120
SEQLENGTH 126
NCHAIN 1 chain(s) in 1WIF data set
NALIGN 40
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : B9EJT5_MOUSE 0.98 0.98 4 120 4 120 117 0 0 266 B9EJT5 MCG7596, isoform CRA_a OS=Mus musculus GN=Pdzd9 PE=2 SV=1
2 : PDZD9_MOUSE 1WIF 0.98 0.98 4 120 4 120 117 0 0 266 Q9D9M4 PDZ domain-containing protein 9 OS=Mus musculus GN=Pdzd9 PE=1 SV=2
3 : Q4V8E3_RAT 0.81 0.89 6 120 1 115 115 0 0 259 Q4V8E3 Putative uncharacterized protein LOC308954 OS=Rattus norvegicus GN=LOC308954 PE=2 SV=1
4 : F1RPD3_PIG 0.80 0.94 19 120 4 105 102 0 0 119 F1RPD3 Uncharacterized protein (Fragment) OS=Sus scrofa PE=4 SV=2
5 : I3LN27_PIG 0.80 0.94 20 120 20 120 101 0 0 264 I3LN27 Uncharacterized protein OS=Sus scrofa GN=LOC100523540 PE=4 SV=1
6 : M3YZI2_MUSPF 0.80 0.92 17 120 16 119 104 0 0 290 M3YZI2 Uncharacterized protein (Fragment) OS=Mustela putorius furo GN=PDZD9 PE=4 SV=1
7 : H0V8D2_CAVPO 0.79 0.93 19 120 20 121 102 0 0 254 H0V8D2 Uncharacterized protein OS=Cavia porcellus GN=PDZD9 PE=4 SV=1
8 : E2RHM5_CANFA 0.78 0.90 17 120 65 168 104 0 0 313 E2RHM5 Uncharacterized protein OS=Canis familiaris GN=PDZD9 PE=4 SV=2
9 : I3M0H5_SPETR 0.78 0.91 21 120 22 121 100 0 0 265 I3M0H5 Uncharacterized protein (Fragment) OS=Spermophilus tridecemlineatus GN=PDZD9 PE=4 SV=1
10 : L9KHY9_TUPCH 0.75 0.90 17 120 1 104 104 0 0 248 L9KHY9 PDZ domain-containing protein 9 (Fragment) OS=Tupaia chinensis GN=TREES_T100019466 PE=4 SV=1
11 : G3U290_LOXAF 0.74 0.88 4 120 4 120 117 0 0 265 G3U290 Uncharacterized protein OS=Loxodonta africana GN=PDZD9 PE=4 SV=1
12 : M3W8B8_FELCA 0.73 0.88 4 120 4 120 117 0 0 264 M3W8B8 Uncharacterized protein OS=Felis catus GN=PDZD9 PE=4 SV=1
13 : S9XS58_9CETA 0.73 0.88 7 120 7 120 114 0 0 261 S9XS58 PDZ domain-containing protein 9 OS=Camelus ferus GN=CB1_001982030 PE=4 SV=1
14 : W5Q0L8_SHEEP 0.73 0.86 10 120 10 120 111 0 0 263 W5Q0L8 Uncharacterized protein OS=Ovis aries GN=PDZD9 PE=4 SV=1
15 : F6V230_CALJA 0.72 0.86 5 120 5 120 116 0 0 259 F6V230 Uncharacterized protein OS=Callithrix jacchus GN=PDZD9 PE=4 SV=1
16 : G1LAM6_AILME 0.72 0.88 4 120 4 120 117 0 0 264 G1LAM6 Uncharacterized protein OS=Ailuropoda melanoleuca GN=PDZD9 PE=4 SV=1
17 : G3RH98_GORGO 0.72 0.89 4 120 4 120 117 0 0 264 G3RH98 Uncharacterized protein OS=Gorilla gorilla gorilla GN=101131090 PE=4 SV=1
18 : L5KMW0_PTEAL 0.72 0.92 14 120 1 107 107 0 0 252 L5KMW0 Uncharacterized protein (Fragment) OS=Pteropus alecto GN=PAL_GLEAN10004981 PE=4 SV=1
19 : PDZD9_HUMAN 0.72 0.90 4 120 4 120 117 0 0 264 Q8IXQ8 PDZ domain-containing protein 9 OS=Homo sapiens GN=PDZD9 PE=2 SV=2
20 : S7N587_MYOBR 0.72 0.86 18 120 21 123 103 0 0 265 S7N587 PDZ domain-containing protein 9 OS=Myotis brandtii GN=D623_10005867 PE=4 SV=1
21 : G1RNG9_NOMLE 0.71 0.89 4 120 4 120 117 0 0 264 G1RNG9 Uncharacterized protein OS=Nomascus leucogenys GN=PDZD9 PE=4 SV=1
22 : H0XIT9_OTOGA 0.71 0.91 4 120 4 120 117 0 0 264 H0XIT9 Uncharacterized protein OS=Otolemur garnettii GN=PDZD9 PE=4 SV=1
23 : L5MHK6_MYODS 0.71 0.87 17 120 1 104 104 0 0 344 L5MHK6 PDZ domain-containing protein 9 (Fragment) OS=Myotis davidii GN=MDA_GLEAN10013747 PE=4 SV=1
24 : L8IDW4_9CETA 0.70 0.85 4 120 4 120 117 0 0 263 L8IDW4 PDZ domain-containing protein 9 OS=Bos mutus GN=M91_00491 PE=4 SV=1
25 : PDZD9_BOVIN 0.70 0.85 4 120 4 120 117 0 0 263 Q32KW7 PDZ domain-containing protein 9 OS=Bos taurus GN=PDZD9 PE=2 SV=1
26 : G7NPZ9_MACMU 0.69 0.86 4 120 4 120 117 0 0 264 G7NPZ9 PDZ domain-containing protein 9 OS=Macaca mulatta GN=EGK_12583 PE=4 SV=1
27 : G7Q0P2_MACFA 0.69 0.86 4 120 4 120 117 0 0 264 G7Q0P2 PDZ domain-containing protein 9 OS=Macaca fascicularis GN=EGM_11551 PE=4 SV=1
28 : PDZD9_MACFA 0.69 0.86 4 120 4 120 117 0 0 264 Q4R989 PDZ domain-containing protein 9 OS=Macaca fascicularis GN=PDZD9 PE=2 SV=1
29 : F7E3R2_HORSE 0.68 0.86 4 120 4 120 117 0 0 265 F7E3R2 Uncharacterized protein OS=Equus caballus GN=PDZD9 PE=4 SV=1
30 : G1PEI4_MYOLU 0.67 0.83 12 120 11 119 109 0 0 261 G1PEI4 Uncharacterized protein (Fragment) OS=Myotis lucifugus GN=PDZD9 PE=4 SV=1
31 : G1SKN5_RABIT 0.65 0.87 10 120 7 117 111 0 0 261 G1SKN5 Uncharacterized protein OS=Oryctolagus cuniculus GN=PDZD9 PE=4 SV=2
32 : G3VHP3_SARHA 0.61 0.88 25 120 37 132 96 0 0 281 G3VHP3 Uncharacterized protein OS=Sarcophilus harrisii GN=PDZD9 PE=4 SV=1
33 : F7FZG4_MONDO 0.60 0.88 25 120 42 137 96 0 0 286 F7FZG4 Uncharacterized protein OS=Monodelphis domestica GN=PDZD9 PE=4 SV=2
34 : M7BAJ9_CHEMY 0.60 0.88 25 121 44 140 97 0 0 279 M7BAJ9 PDZ domain-containing protein 9 OS=Chelonia mydas GN=UY3_07858 PE=4 SV=1
35 : K7G8X9_PELSI 0.59 0.87 26 120 23 117 95 0 0 251 K7G8X9 Uncharacterized protein (Fragment) OS=Pelodiscus sinensis GN=PDZD9 PE=4 SV=1
36 : F6RRJ3_ORNAN 0.56 0.82 4 120 3 119 117 0 0 256 F6RRJ3 Uncharacterized protein OS=Ornithorhynchus anatinus GN=PDZD9 PE=4 SV=2
37 : V8N8D8_OPHHA 0.56 0.81 23 121 228 326 99 0 0 522 V8N8D8 PDZ domain-containing protein 9 (Fragment) OS=Ophiophagus hannah GN=PDZD9 PE=4 SV=1
38 : H9GRK0_ANOCA 0.50 0.78 9 121 9 121 113 0 0 258 H9GRK0 Uncharacterized protein (Fragment) OS=Anolis carolinensis GN=PDZD9 PE=4 SV=1
39 : H3AGT8_LATCH 0.44 0.67 1 121 1 121 121 0 0 253 H3AGT8 Uncharacterized protein (Fragment) OS=Latimeria chalumnae PE=4 SV=1
40 : M3XJL2_LATCH 0.44 0.67 1 121 11 131 121 0 0 288 M3XJL2 Uncharacterized protein OS=Latimeria chalumnae PE=4 SV=1
## ALIGNMENTS 1 - 40
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A G 0 0 132 3 54 SS
2 2 A S - 0 0 128 3 47 KS
3 3 A S + 0 0 115 3 80 DA
4 4 A G + 0 0 68 19 49 GG AA AA A AS SSAAAA G GE
5 5 A S - 0 0 113 20 59 SS SA SVS S ST VVSSSS S TK
6 6 A S - 0 0 92 21 84 LLM RH RLR H RR QQHHRV Q MP
7 7 A G S S+ 0 0 40 22 56 KKE KKK KKK K KK KKKKKK A IN
8 8 A S S S+ 0 0 98 22 69 SSK SSS NSN N NT NNNNNS Y QS
9 9 A K - 0 0 123 23 69 KKD KKR KKK K KK VVKKKR P QIS
10 10 A N S S+ 0 0 156 25 51 NNS KKKKKKK K KK KKKKKK K R QRQ
11 11 A E S S- 0 0 147 25 54 EES EGGGEDE E ED GGEEEE K A ESS
12 12 A K S S+ 0 0 204 26 53 KKK GKRKGKR R RK KKRRRKKK G NKE
13 13 A E - 0 0 71 26 68 EES QNHQGQG G GR QQGGGQKK Q EQS
14 14 A Q + 0 0 163 27 71 QQK VVVVVIVVV VV VVVVVIAE A EVT
15 15 A L + 0 0 95 27 80 LLN SGSNSGSNS SS NNSSSSTK L DTS
16 16 A S - 0 0 122 27 74 SSE LFLLIFIFN IS LLIIILFL V SVV
17 17 A K + 0 0 179 31 61 KKK N K KKNKEKNKQK KKQKKKKKKQN Q NLL
18 18 A A + 0 0 104 32 63 AAE V V VVVVVVVVGVVVVVVVVVVIVV G MQQ
19 19 A K + 0 0 177 34 34 KKYK KKK KKKKKKKKRKTKKTKKKKKKTK K DKK
20 20 A A - 0 0 78 35 71 AANPPSPS TASSPTSTSTSTSSPPTTTTST T QEE
21 21 A S + 0 0 129 36 17 SSHSSSSSSSSSSSSSSSSSSSSSSSSSSTT S SSS
22 22 A V + 0 0 106 36 58 VVRVVVVVVVVIVVVVVVVVVVVVVVVVEVG K EEE
23 23 A S + 0 0 125 37 28 SSAHHHHHHHHHHHHHHHHHHHHHHHHHHHH HHHHH
24 24 A S + 0 0 108 37 57 SSSNNNNNNDTNSDDNNSNNNNNDDNNNKNT TTTNN
25 25 A L + 0 0 155 40 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL LLLLL
26 26 A N + 0 0 159 41 20 NNNSSSSSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSSSS
27 27 A K - 0 0 124 41 49 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKTTAATTTTT
28 28 A V E -A 108 0A 55 41 24 VVMTTTTTTTTTTTTTTTTTTTTTTTTTTTTTITTTTTTT
29 29 A I E +A 107 0A 9 41 79 IIIQQQKQQRQQQHQQQLQQQLRQQQQQKQQIILLLIVLL
30 30 A Q E +A 106 0A 95 41 47 QQHQQQQQQQKQQQQQQEQKQQKQQQQQEKQKKKKKKKKK
31 31 A T E -A 105 0A 21 41 14 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTVV
32 32 A K E -A 104 0A 85 41 42 KKKKKKKKKRKKKKKKKKKEKKEKKKKKKEKSSNNNNNKK
33 33 A L E -A 103 0A 5 41 21 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLIIIIIII
34 34 A T E -A 102 0A 104 41 60 TTTTTTTTTTTTTTTTTTTPTTPTTTTTTPTKKKKKQQQQ
35 35 A V - 0 0 10 41 41 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVMMMMMMMKK
36 36 A G > - 0 0 20 41 29 GGGGGGGGGGGGGGGGGGGGDSGGGGGGSGGRRGGGDEGG
37 37 A N T 3 S+ 0 0 140 41 69 NNSSSNSNRSSNSSRNSSSSSSSSSRRRSSSASEEYGETT
38 38 A L T 3 S- 0 0 132 41 63 LLLLLLLLLLLLLLLLLMLLLLLMMLLLLLMQQQQQQDEE
39 39 A G < - 0 0 16 41 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
40 40 A L - 0 0 21 41 5 LLLLLLLLLLLLLLLLLLLLLILLLLLLLLLLLLLLLLFF
41 41 A G + 0 0 34 41 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
42 42 A L - 0 0 10 41 3 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLILLL
43 43 A V + 0 0 67 41 9 VVVIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIVV
44 44 A V E -C 53 0B 11 41 18 VVIIIVIIIIIIVIIIIVIIILIIIIIIVIIIVVVILLII
45 45 A I E -C 52 0B 20 41 6 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIFFIIIIIII
46 46 A Q E +C 51 0B 97 41 0 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
47 47 A N E > -C 50 0B 51 41 33 NNNHHNHHHHHNHHHNHHHHHHHHHHHHHHHHHNNNNNHH
48 48 A G T 3 S- 0 0 37 41 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
49 49 A P T 3 S+ 0 0 83 41 0 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
50 50 A Y E < S-C 47 0B 57 41 1 YYYYYYYYYYYYYYYYYYYYYYYYYYYYFYYYYYYYYYFF
51 51 A L E -C 46 0B 0 41 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
52 52 A Q E -CD 45 73B 3 41 0 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
53 53 A I E +C 44 0B 7 41 1 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIVIII
54 54 A S - 0 0 24 41 55 SSSTTTTTSTITTTTTTTTTTTTSSTTTITTACTTTSAVV
55 55 A H - 0 0 87 41 56 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHNNSSNGSSS
56 56 A L - 0 0 28 41 3 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLILLLLLLL
57 57 A I > - 0 0 41 41 20 IIIIIIIIILIIIIIIIIILIILIIIIIILLVVVVLVVII
58 58 A N T 3 S+ 0 0 125 41 69 NNNKKRKRKRKRKARRRKRKRKKTTRRRKKKEEQQEEEEE
59 59 A K T 3 S+ 0 0 153 41 9 KKKKKNKKNKKTKKKKKKKKKKKKKKKKKKKKKKKKKKKK
60 60 A G S < S- 0 0 15 41 7 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGSGGGGGGSGG
61 61 A A S > S+ 0 0 10 41 33 AAAAAAAAAAAAAAAAASAAAAAAAAAAAAPTTSSAAAPP
62 62 A A G > S+ 0 0 3 41 0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
63 63 A A G 3 S+ 0 0 36 41 19 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAEDD
64 64 A S G < S+ 0 0 102 41 56 SSSRRRRRKKQTRRNRNKNRNQRRRNNNRRKKKKKKRRRR
65 65 A D < - 0 0 32 41 24 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDNNNDDTT
66 66 A G S S+ 0 0 83 41 4 GGGGGGGGRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
67 67 A I S S+ 0 0 77 41 54 IIIKKKKKRKKKKTKKKKKTKKTTTKKKKTKRRRRRKKKK
68 68 A L S S- 0 0 7 41 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
69 69 A Q > - 0 0 78 41 44 QQQQQKQKKRQQQQQKQHQRQQRQQQQQQRRKKKKKQQKK
70 70 A P T 3 S+ 0 0 53 41 10 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPASPP
71 71 A G T 3 S+ 0 0 8 41 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
72 72 A D < - 0 0 1 41 0 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
73 73 A V B -D 52 0B 1 41 16 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVIIVITII
74 74 A L E +B 107 0A 2 41 3 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLVLLLLLLL
75 75 A I E S+ 0 0A 14 41 14 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIILLLL
76 76 A S E - 0 0A 34 41 45 SSSTTSSSSSSSSSSTSSSSSSSSSSSSSSSSSKKKKKKK
77 77 A V E S-B 105 0A 4 41 24 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVIIIIIIITT
78 78 A G S S- 0 0 14 41 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
79 79 A H S S+ 0 0 201 41 28 HHHHHHYHHHHHHYHHHHHQHHQYYYYYHQHHHHHHHHHH
80 80 A A S S- 0 0 19 41 30 AAAAAAAAAAAAAAAAAAAAAAAAAAAAATASSAATAAVV
81 81 A N + 0 0 104 41 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
82 82 A V > + 0 0 0 41 1 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVIVVVVV
83 83 A L T 3 S+ 0 0 55 41 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
84 84 A G T 3 S+ 0 0 57 41 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
85 85 A Y < - 0 0 66 41 7 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYWWYWWYY
86 86 A T > - 0 0 48 41 14 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTKK
87 87 A L H > S+ 0 0 49 41 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
88 88 A R H > S+ 0 0 215 41 0 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
89 89 A E H > S+ 0 0 74 41 0 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
90 90 A F H X S+ 0 0 2 41 9 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFLLLLLLL
91 91 A L H X S+ 0 0 77 41 44 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLWWLRRRR
92 92 A K H < S+ 0 0 95 41 41 KKKKKKKKKKKKKKQKQKQKQKKKKQQQQKQQQQQQQQQQ
93 93 A L H >< S+ 0 0 26 41 1 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLFLLLL
94 94 A L H 3< S+ 0 0 28 41 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
95 95 A Q T 3< S+ 0 0 134 41 39 QQQQQQQQQQQQQQQQQQQQQHQQQQQQQQQHHHHYHHNN
96 96 A N S < S+ 0 0 117 41 63 NNNNNHHHNHHHHHHHHHHCHQCHHHHHHCQHHNNSTNKK
97 97 A I - 0 0 55 41 22 IIIIIIIIITIIIIIIITIIIIIIIIIITITIIIIIVTII
98 98 A T - 0 0 105 41 42 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTPPPPPPPPP
99 99 A I S S+ 0 0 98 41 18 IIIIIIIIIIIIIIIIITITIITIIVVVITIIIIIIIIII
100 100 A G S S+ 0 0 54 41 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
101 101 A T - 0 0 40 41 26 TTTTTTTTTTSTTTTTTTTTTTTTTTTTTTTAASTTTTAA
102 102 A V E +A 34 0A 117 41 24 VVVVVVVVVVVVVIVVVVVVVVVIIVVVVVVIIVVVVVEE
103 103 A L E -A 33 0A 32 41 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
104 104 A Q E -A 32 0A 89 41 6 QQQQQQQQQQQQQQQQQQQQQQQQQQQQEQGQQQQQQQQQ
105 105 A I E -AB 31 77A 6 41 2 IIIIIIIIFIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
106 106 A K E +A 30 0A 70 41 48 KKKKKKKKKRKKEKKKKKKEKKEKKKKKKEKRRRRRQQMM
107 107 A A E -AB 29 74A 0 41 27 AAAVVIVIVVVIVVVIVAVVVVVVVVVVVVVVVVVVIVVV
108 108 A Y E -A 28 0A 61 41 0 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
109 109 A R S S+ 0 0 122 41 6 RRRRRRRRRRRRQRRRRQRRRRRRRRRRRRRRRRRRRRRR
110 110 A G S S+ 0 0 72 41 25 GGGDDDDYDDDDNDDDDDDEDDEDDDDDDESDDDDDDDDD
111 111 A F S S+ 0 0 97 41 1 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFYY
112 112 A L S S- 0 0 41 41 18 LLIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIVVMIMII
113 113 A E - 0 0 154 41 35 EEEDDDDDADDDDDDDNNNDNDDDDNNNDDDDDEEDKKDD
114 114 A I - 0 0 68 41 7 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIVVIILII
115 115 A P >> - 0 0 34 41 0 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
116 116 A Q T 34 S+ 0 0 145 41 50 QQQKKQQPRQQQKQEKEQEQEQQQQEEEQQKPPQQQGKEE
117 117 A E T 34 S+ 0 0 181 41 24 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEHHERREE
118 118 A W T <4 S+ 0 0 136 41 0 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
119 119 A Q < + 0 0 119 41 41 QQKQQQQKQQQQQQQQQQQQQQQQQLLLEQQQQQKQQEAA
120 120 A D + 0 0 123 41 49 DDDDDEEEEEEEEEEEEEEDEEDEEEEEEDENNNNNTAKK
121 121 A S S S+ 0 0 108 6 60 A AAGD
122 122 A G - 0 0 51 1 0
123 123 A P S S- 0 0 137 1 0
124 124 A S - 0 0 103 1 0
125 125 A S 0 0 136 1 0
126 126 A G 0 0 118 1 0
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 33 0 0 67 0 0 0 0 0 0 0 0 0 3 0 0 0.637 21 0.46
2 2 A 0 0 0 0 0 0 0 0 0 0 67 0 0 0 0 33 0 0 0 0 3 0 0 0.637 21 0.53
3 3 A 0 0 0 0 0 0 0 0 33 0 33 0 0 0 0 0 0 0 0 33 3 0 0 1.099 36 0.20
4 4 A 0 0 0 0 0 0 0 26 53 0 16 0 0 0 0 0 0 5 0 0 19 0 0 1.136 37 0.50
5 5 A 15 0 0 0 0 0 0 0 5 0 65 10 0 0 0 5 0 0 0 0 20 0 0 1.094 36 0.40
6 6 A 5 14 0 10 0 0 0 0 0 5 5 0 0 19 29 0 14 0 0 0 21 0 0 1.889 63 0.15
7 7 A 0 0 5 0 0 0 0 5 5 0 0 0 0 0 0 77 0 5 5 0 22 0 0 0.902 30 0.43
8 8 A 0 0 0 0 0 0 5 0 0 0 41 5 0 0 0 5 5 0 41 0 22 0 0 1.293 43 0.30
9 9 A 9 0 4 0 0 0 0 0 0 4 4 0 0 0 9 61 4 0 0 4 23 0 0 1.409 47 0.31
10 10 A 0 0 0 0 0 0 0 0 0 0 4 0 0 0 8 68 8 0 12 0 25 0 0 1.050 35 0.49
11 11 A 0 0 0 0 0 0 0 20 4 0 12 0 0 0 0 4 0 52 0 8 25 0 0 1.376 45 0.45
12 12 A 0 0 0 0 0 0 0 12 0 0 0 0 0 0 27 54 0 4 4 0 26 0 0 1.186 39 0.47
13 13 A 0 0 0 0 0 0 0 27 0 0 8 0 0 4 4 8 31 15 4 0 26 0 0 1.774 59 0.32
14 14 A 59 0 7 0 0 0 0 0 7 0 0 4 0 0 0 4 11 7 0 0 27 0 0 1.377 45 0.29
15 15 A 0 15 0 0 0 0 0 7 0 0 44 7 0 0 0 4 0 0 19 4 27 0 0 1.585 52 0.20
16 16 A 11 26 22 0 15 0 0 0 0 0 19 0 0 0 0 0 0 4 4 0 27 0 0 1.768 59 0.25
17 17 A 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 61 13 3 16 0 31 0 0 1.146 38 0.38
18 18 A 69 0 3 3 0 0 0 6 9 0 0 0 0 0 0 0 6 3 0 0 32 0 0 1.151 38 0.37
19 19 A 0 0 0 0 0 0 3 0 0 0 0 9 0 0 3 82 0 0 0 3 34 0 0 0.685 22 0.65
20 20 A 0 0 0 0 0 0 0 0 11 17 29 31 0 0 0 0 3 6 3 0 35 0 0 1.639 54 0.29
21 21 A 0 0 0 0 0 0 0 0 0 0 92 6 0 3 0 0 0 0 0 0 36 0 0 0.340 11 0.83
22 22 A 78 0 3 0 0 0 0 3 0 0 0 0 0 0 3 3 0 11 0 0 36 0 0 0.838 27 0.41
23 23 A 0 0 0 0 0 0 0 0 3 0 8 0 0 89 0 0 0 0 0 0 37 0 0 0.403 13 0.72
24 24 A 0 0 0 0 0 0 0 0 0 0 16 14 0 0 0 3 0 0 54 14 37 0 0 1.266 42 0.43
25 25 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40 0 0 0.000 0 1.00
26 26 A 0 0 0 0 0 0 0 2 0 0 88 0 0 0 0 0 0 0 10 0 41 0 0 0.432 14 0.79
27 27 A 0 0 0 0 0 0 0 0 5 0 0 17 0 0 0 78 0 0 0 0 41 0 0 0.643 21 0.50
28 28 A 7 0 2 2 0 0 0 0 0 0 0 88 0 0 0 0 0 0 0 0 41 0 0 0.487 16 0.76
29 29 A 2 17 17 0 0 0 0 0 0 0 0 0 0 2 5 5 51 0 0 0 41 0 0 1.422 47 0.21
30 30 A 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 32 61 5 0 0 41 0 0 0.904 30 0.53
31 31 A 5 0 0 0 0 0 0 0 0 0 0 95 0 0 0 0 0 0 0 0 41 0 0 0.195 6 0.86
32 32 A 0 0 0 0 0 0 0 0 0 0 5 0 0 0 2 73 0 7 12 0 41 0 0 0.914 30 0.57
33 33 A 0 83 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.457 15 0.79
34 34 A 0 0 0 0 0 0 0 0 0 7 0 71 0 0 0 12 10 0 0 0 41 0 0 0.920 30 0.39
35 35 A 78 0 0 17 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 41 0 0 0.643 21 0.58
36 36 A 0 0 0 0 0 0 0 83 0 0 5 0 0 0 5 0 0 2 0 5 41 0 0 0.688 22 0.71
37 37 A 0 0 0 0 0 0 2 2 2 0 51 5 0 0 12 0 0 7 17 0 41 0 0 1.511 50 0.30
38 38 A 0 68 0 10 0 0 0 0 0 0 0 0 0 0 0 0 15 5 0 2 41 0 0 1.007 33 0.36
39 39 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
40 40 A 0 93 2 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.308 10 0.95
41 41 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
42 42 A 0 98 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.115 3 0.97
43 43 A 15 0 85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.416 13 0.91
44 44 A 24 7 68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.796 26 0.81
45 45 A 0 0 95 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.195 6 0.94
46 46 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 41 0 0 0.000 0 1.00
47 47 A 0 0 0 0 0 0 0 0 0 0 0 0 0 71 0 0 0 0 29 0 41 0 0 0.605 20 0.66
48 48 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
49 49 A 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
50 50 A 0 0 0 0 7 0 93 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.262 8 0.99
51 51 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
52 52 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 41 0 0 0.000 0 1.00
53 53 A 2 0 98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.115 3 0.98
54 54 A 5 0 5 0 0 0 0 0 5 0 20 63 2 0 0 0 0 0 0 0 41 0 0 1.140 38 0.45
55 55 A 0 0 0 0 0 0 0 2 0 0 12 0 0 78 0 0 0 0 7 0 41 0 0 0.732 24 0.44
56 56 A 0 98 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.115 3 0.97
57 57 A 15 15 71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.807 26 0.79
58 58 A 0 0 0 0 0 0 0 0 2 0 0 5 0 0 29 32 5 17 10 0 41 0 0 1.638 54 0.31
59 59 A 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 93 0 0 5 0 41 0 0 0.308 10 0.91
60 60 A 0 0 0 0 0 0 0 95 0 0 5 0 0 0 0 0 0 0 0 0 41 0 0 0.195 6 0.92
61 61 A 0 0 0 0 0 0 0 0 80 7 7 5 0 0 0 0 0 0 0 0 41 0 0 0.705 23 0.67
62 62 A 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
63 63 A 0 0 0 0 0 0 0 0 93 0 0 0 0 0 0 0 0 2 0 5 41 0 0 0.308 10 0.81
64 64 A 0 0 0 0 0 0 0 0 0 0 10 2 0 0 44 22 5 0 17 0 41 0 0 1.461 48 0.43
65 65 A 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 7 88 41 0 0 0.453 15 0.76
66 66 A 0 0 0 0 0 0 0 98 0 0 0 0 0 0 2 0 0 0 0 0 41 0 0 0.115 3 0.95
67 67 A 0 0 10 0 0 0 0 0 0 0 0 15 0 0 15 61 0 0 0 0 41 0 0 1.091 36 0.46
68 68 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
69 69 A 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 27 59 0 0 0 41 0 0 1.014 33 0.55
70 70 A 0 0 0 0 0 0 0 0 2 95 2 0 0 0 0 0 0 0 0 0 41 0 0 0.229 7 0.89
71 71 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
72 72 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 41 0 0 0.000 0 1.00
73 73 A 85 0 12 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 41 0 0 0.482 16 0.84
74 74 A 2 98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.115 3 0.97
75 75 A 0 10 90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.320 10 0.86
76 76 A 0 0 0 0 0 0 0 0 0 0 76 7 0 0 0 17 0 0 0 0 41 0 0 0.705 23 0.55
77 77 A 78 0 17 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 41 0 0 0.643 21 0.75
78 78 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
79 79 A 0 0 0 0 0 0 17 0 0 0 0 0 0 76 0 0 7 0 0 0 41 0 0 0.705 23 0.72
80 80 A 5 0 0 0 0 0 0 0 85 0 5 5 0 0 0 0 0 0 0 0 41 0 0 0.577 19 0.70
81 81 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 41 0 0 0.000 0 1.00
82 82 A 98 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.115 3 0.98
83 83 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
84 84 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
85 85 A 0 0 0 0 0 10 90 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.320 10 0.93
86 86 A 0 0 0 0 0 0 0 0 0 0 0 95 0 0 0 5 0 0 0 0 41 0 0 0.195 6 0.86
87 87 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
88 88 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 41 0 0 0.000 0 1.00
89 89 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 41 0 0 0.000 0 1.00
90 90 A 0 17 0 0 83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.457 15 0.91
91 91 A 0 85 0 0 0 5 0 0 0 0 0 0 0 0 10 0 0 0 0 0 41 0 0 0.509 17 0.55
92 92 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56 44 0 0 0 41 0 0 0.686 22 0.58
93 93 A 0 98 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.115 3 0.99
94 94 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
95 95 A 0 0 0 0 0 0 2 0 0 0 0 0 0 17 0 0 76 0 5 0 41 0 0 0.751 25 0.61
96 96 A 0 0 0 0 0 0 0 0 0 0 2 2 7 54 0 5 5 0 24 0 41 0 0 1.345 44 0.36
97 97 A 2 0 85 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 41 0 0 0.482 16 0.78
98 98 A 0 0 0 0 0 0 0 0 0 22 0 78 0 0 0 0 0 0 0 0 41 0 0 0.526 17 0.57
99 99 A 7 0 83 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 41 0 0 0.574 19 0.82
100 100 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
101 101 A 0 0 0 0 0 0 0 0 10 0 5 85 0 0 0 0 0 0 0 0 41 0 0 0.509 17 0.73
102 102 A 83 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 41 0 0 0.559 18 0.76
103 103 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
104 104 A 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 95 2 0 0 41 0 0 0.229 7 0.93
105 105 A 0 0 98 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.115 3 0.98
106 106 A 0 0 0 5 0 0 0 0 0 0 0 0 0 0 15 66 5 10 0 0 41 0 0 1.078 35 0.52
107 107 A 76 0 12 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.725 24 0.73
108 108 A 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
109 109 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 95 0 5 0 0 0 41 0 0 0.195 6 0.94
110 110 A 0 0 0 0 0 0 2 10 0 0 2 0 0 0 0 0 0 7 2 76 41 0 0 0.902 30 0.74
111 111 A 0 0 0 0 95 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.195 6 0.99
112 112 A 5 7 83 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.641 21 0.82
113 113 A 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 5 0 15 17 61 41 0 0 1.123 37 0.64
114 114 A 5 2 93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.308 10 0.93
115 115 A 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
116 116 A 0 0 0 0 0 0 0 2 0 7 0 0 0 0 2 15 51 22 0 0 41 0 0 1.329 44 0.50
117 117 A 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 90 0 0 41 0 0 0.387 12 0.75
118 118 A 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
119 119 A 0 7 0 0 0 0 0 0 5 0 0 0 0 0 0 7 76 5 0 0 41 0 0 0.889 29 0.59
120 120 A 0 0 0 0 0 0 0 0 2 0 0 2 0 0 0 5 0 56 12 22 41 0 0 1.242 41 0.51
121 121 A 0 0 0 0 0 0 0 17 50 0 17 0 0 0 0 0 0 0 0 17 6 0 0 1.242 41 0.40
122 122 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
123 123 A 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
124 124 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
125 125 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
126 126 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
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