Complet list of 1whv hssp file
Complete list of 1whv.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1WHV
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-11
HEADER HYDROLASE 28-MAY-04 1WHV
COMPND MOL_ID: 1; MOLECULE: POLY(A)-SPECIFIC RIBONUCLEASE; CHAIN: A; FRAGMENT
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: MUS MUSCULUS; ORGANISM_COMMON: HOUSE M
AUTHOR T.NAGATA,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA,M.SHIROUZU, S.YOKOYAMA,RIKEN
DBREF 1WHV A 430 516 UNP Q8VDG3 PARN_MOUSE 430 516
SEQLENGTH 100
NCHAIN 1 chain(s) in 1WHV data set
NALIGN 92
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : Q3TUQ8_MOUSE2ROK 1.00 1.00 8 94 430 516 87 0 0 624 Q3TUQ8 Putative uncharacterized protein OS=Mus musculus GN=Parn PE=2 SV=1
2 : PARN_MOUSE 1UG8 0.99 0.99 8 94 430 516 87 0 0 624 Q8VDG3 Poly(A)-specific ribonuclease PARN OS=Mus musculus GN=Parn PE=1 SV=1
3 : D3ZJM8_RAT 0.98 0.99 8 94 430 516 87 0 0 624 D3ZJM8 Poly(A)-specific ribonuclease OS=Rattus norvegicus GN=Parn PE=2 SV=2
4 : K9KDB4_HORSE 0.98 0.99 8 89 176 257 82 0 0 376 K9KDB4 Poly(A)-specific ribonuclease PARN-like protein (Fragment) OS=Equus caballus PE=2 SV=1
5 : L9KYV4_TUPCH 0.97 0.98 8 94 372 458 87 0 0 642 L9KYV4 Poly(A)-specific ribonuclease PARN OS=Tupaia chinensis GN=TREES_T100018432 PE=4 SV=1
6 : F7I1A4_CALJA 0.95 0.98 8 94 262 348 87 0 0 464 F7I1A4 Uncharacterized protein OS=Callithrix jacchus GN=PARN PE=4 SV=1
7 : F7IH95_CALJA 0.95 0.98 8 94 437 523 87 0 0 639 F7IH95 Poly(A)-specific ribonuclease PARN isoform 1 OS=Callithrix jacchus GN=PARN PE=2 SV=1
8 : F7IH98_CALJA 0.95 0.98 8 94 439 525 87 0 0 641 F7IH98 Uncharacterized protein OS=Callithrix jacchus GN=PARN PE=4 SV=1
9 : F7IPB1_CALJA 0.95 0.98 8 94 391 477 87 0 0 593 F7IPB1 Uncharacterized protein OS=Callithrix jacchus GN=PARN PE=4 SV=1
10 : K9IMX9_DESRO 0.95 0.98 8 94 437 523 87 0 0 638 K9IMX9 Putative polya-specific exoribonuclease parn OS=Desmodus rotundus PE=2 SV=1
11 : M3YSP4_MUSPF 0.95 0.98 8 94 437 523 87 0 0 638 M3YSP4 Uncharacterized protein OS=Mustela putorius furo GN=PARN PE=4 SV=1
12 : U6CXW7_NEOVI 0.95 0.98 8 94 437 523 87 0 0 638 U6CXW7 Poly(A)-specific ribonuclease PARN OS=Neovison vison GN=PARN PE=2 SV=1
13 : D2H8E9_AILME 0.94 0.97 8 94 430 516 87 0 0 615 D2H8E9 Putative uncharacterized protein (Fragment) OS=Ailuropoda melanoleuca GN=PANDA_006508 PE=4 SV=1
14 : F1RLR7_PIG 0.94 0.98 8 94 149 235 87 0 0 350 F1RLR7 Uncharacterized protein OS=Sus scrofa GN=PARN PE=4 SV=2
15 : F6XSN7_MACMU 0.94 0.98 8 94 442 528 87 0 0 644 F6XSN7 Uncharacterized protein OS=Macaca mulatta GN=PARN PE=4 SV=1
16 : G1LXQ5_AILME 0.94 0.97 8 94 438 524 87 0 0 639 G1LXQ5 Uncharacterized protein OS=Ailuropoda melanoleuca GN=PARN PE=4 SV=1
17 : G1SD24_RABIT 0.94 0.98 8 94 434 520 87 0 0 635 G1SD24 Uncharacterized protein (Fragment) OS=Oryctolagus cuniculus GN=PARN PE=4 SV=1
18 : G3TEC9_LOXAF 0.94 0.98 8 94 437 523 87 0 0 631 G3TEC9 Uncharacterized protein OS=Loxodonta africana GN=PARN PE=4 SV=1
19 : G7NPP5_MACMU 0.94 0.98 8 94 432 518 87 0 0 634 G7NPP5 Poly(A)-specific ribonuclease PARN (Fragment) OS=Macaca mulatta GN=EGK_12523 PE=4 SV=1
20 : G7Q0J0_MACFA 0.94 0.98 8 94 432 518 87 0 0 634 G7Q0J0 Poly(A)-specific ribonuclease PARN (Fragment) OS=Macaca fascicularis GN=EGM_11494 PE=4 SV=1
21 : H9FV31_MACMU 0.94 0.98 8 94 437 523 87 0 0 639 H9FV31 Poly(A)-specific ribonuclease PARN isoform 1 OS=Macaca mulatta GN=PARN PE=2 SV=1
22 : M3VUQ1_FELCA 0.94 0.98 8 94 437 523 87 0 0 638 M3VUQ1 Uncharacterized protein OS=Felis catus GN=PARN PE=4 SV=1
23 : PARN_PONAB 0.94 0.98 8 94 437 523 87 0 0 639 Q5RC51 Poly(A)-specific ribonuclease PARN OS=Pongo abelii GN=PARN PE=2 SV=1
24 : S7PS41_MYOBR 0.94 0.98 8 94 476 562 87 0 0 752 S7PS41 Poly(A)-specific ribonuclease PARN OS=Myotis brandtii GN=D623_10032195 PE=4 SV=1
25 : B3KN69_HUMAN 0.93 0.98 8 94 149 235 87 0 0 351 B3KN69 cDNA FLJ13804 fis, clone THYRO1000197, highly similar to Poly(A)-specific ribonuclease PARN (EC 3.1.13.4) OS=Homo sapiens PE=2 SV=1
26 : B4DSB0_HUMAN 0.93 0.98 8 94 262 348 87 0 0 464 B4DSB0 Poly(A)-specific ribonuclease PARN OS=Homo sapiens GN=PARN PE=2 SV=1
27 : F6UWF1_ORNAN 0.93 0.95 8 94 189 275 87 0 0 388 F6UWF1 Uncharacterized protein OS=Ornithorhynchus anatinus GN=LOC100074145 PE=4 SV=2
28 : F6XU41_CANFA 0.93 0.98 8 94 437 523 87 0 0 638 F6XU41 Uncharacterized protein OS=Canis familiaris GN=PARN PE=4 SV=1
29 : G1RH04_NOMLE 0.93 0.98 8 94 437 523 87 0 0 639 G1RH04 Uncharacterized protein OS=Nomascus leucogenys GN=PARN PE=4 SV=1
30 : G3RWB8_GORGO 0.93 0.98 8 94 381 467 87 0 0 565 G3RWB8 Uncharacterized protein OS=Gorilla gorilla gorilla GN=101150804 PE=4 SV=1
31 : H2NQ72_PONAB 0.93 0.98 9 94 439 524 86 0 0 640 H2NQ72 Poly(A)-specific ribonuclease PARN OS=Pongo abelii GN=PARN PE=4 SV=1
32 : H2QAM0_PANTR 0.93 0.98 8 94 437 523 87 0 0 639 H2QAM0 Uncharacterized protein OS=Pan troglodytes GN=PARN PE=4 SV=1
33 : I3M9X4_SPETR 0.93 0.95 8 94 394 480 87 0 0 592 I3M9X4 Uncharacterized protein OS=Spermophilus tridecemlineatus GN=PARN PE=4 SV=1
34 : K7BWE4_PANTR 0.93 0.98 8 94 437 523 87 0 0 639 K7BWE4 Poly(A)-specific ribonuclease (Deadenylation nuclease) OS=Pan troglodytes GN=PARN PE=2 SV=1
35 : L8HXS7_9CETA 0.93 0.97 8 94 432 518 87 0 0 617 L8HXS7 Poly(A)-specific ribonuclease PARN (Fragment) OS=Bos mutus GN=M91_01463 PE=4 SV=1
36 : PARN_BOVIN 0.93 0.97 8 94 437 523 87 0 0 638 P69341 Poly(A)-specific ribonuclease PARN OS=Bos taurus GN=PARN PE=1 SV=2
37 : PARN_HUMAN 2A1S 0.93 0.98 8 94 437 523 87 0 0 639 O95453 Poly(A)-specific ribonuclease PARN OS=Homo sapiens GN=PARN PE=1 SV=1
38 : G5B4F1_HETGA 0.92 0.98 8 94 433 519 87 0 0 617 G5B4F1 Poly(A)-specific ribonuclease PARN (Fragment) OS=Heterocephalus glaber GN=GW7_20534 PE=4 SV=1
39 : H0Z3M0_TAEGU 0.92 0.94 8 94 437 523 87 0 0 638 H0Z3M0 Uncharacterized protein (Fragment) OS=Taeniopygia guttata GN=PARN PE=4 SV=1
40 : R0L3Y5_ANAPL 0.92 0.95 8 94 407 493 87 0 0 590 R0L3Y5 Poly(A)-specific ribonuclease PARN (Fragment) OS=Anas platyrhynchos GN=Anapl_13476 PE=4 SV=1
41 : U3J2T9_ANAPL 0.92 0.95 8 94 437 523 87 0 0 636 U3J2T9 Uncharacterized protein (Fragment) OS=Anas platyrhynchos GN=PARN PE=4 SV=1
42 : F1NEI8_CHICK 0.91 0.95 8 94 376 462 87 0 0 574 F1NEI8 Uncharacterized protein OS=Gallus gallus GN=PARN PE=4 SV=2
43 : G1MQS6_MELGA 0.91 0.95 8 94 438 524 87 0 0 636 G1MQS6 Uncharacterized protein (Fragment) OS=Meleagris gallopavo GN=PARN PE=4 SV=1
44 : K7G9L5_PELSI 0.91 0.95 8 94 437 523 87 0 0 640 K7G9L5 Uncharacterized protein OS=Pelodiscus sinensis GN=PARN PE=4 SV=1
45 : K7G9M5_PELSI 0.91 0.95 8 94 376 462 87 0 0 577 K7G9M5 Uncharacterized protein OS=Pelodiscus sinensis GN=PARN PE=4 SV=1
46 : Q5ZJ72_CHICK 0.91 0.95 8 94 376 462 87 0 0 574 Q5ZJ72 Uncharacterized protein OS=Gallus gallus GN=RCJMB04_20e14 PE=2 SV=1
47 : U3JMS3_FICAL 0.91 0.94 8 94 443 529 87 0 0 644 U3JMS3 Uncharacterized protein OS=Ficedula albicollis GN=PARN PE=4 SV=1
48 : H0UY53_CAVPO 0.90 0.95 8 94 433 519 87 0 0 633 H0UY53 Uncharacterized protein (Fragment) OS=Cavia porcellus GN=PARN PE=4 SV=1
49 : PARN_XENLA 0.90 0.94 8 94 436 522 87 0 0 631 Q90ZA1 Poly(A)-specific ribonuclease PARN OS=Xenopus laevis GN=parn PE=1 SV=1
50 : H9G9S4_ANOCA 0.89 0.95 8 92 438 522 85 0 0 650 H9G9S4 Uncharacterized protein OS=Anolis carolinensis GN=PARN PE=4 SV=1
51 : V9KGC7_CALMI 0.89 0.93 8 94 452 538 87 0 0 651 V9KGC7 Poly(A)-specific ribonuclease PARN OS=Callorhynchus milii PE=2 SV=1
52 : V9KKB9_CALMI 0.89 0.93 8 94 436 522 87 0 0 635 V9KKB9 Poly(A)-specific ribonuclease PARN OS=Callorhynchus milii PE=2 SV=1
53 : Q07G83_XENTR 0.88 0.96 8 91 436 519 84 0 0 519 Q07G83 Poly(A)-specific ribonuclease (Deadenylation nuclease) (Fragment) OS=Xenopus tropicalis GN=TEgg040n07.1-001 PE=2 SV=1
54 : T1E5J8_CROHD 0.88 0.94 8 92 376 460 85 0 0 577 T1E5J8 Poly(A)-specific ribonuclease PARN-like protein OS=Crotalus horridus PE=2 SV=1
55 : W5LXH8_LEPOC 0.88 0.93 8 91 437 520 84 0 0 682 W5LXH8 Uncharacterized protein OS=Lepisosteus oculatus PE=4 SV=1
56 : B5DFR2_XENTR 0.87 0.95 8 94 436 522 87 0 0 525 B5DFR2 Uncharacterized protein (Fragment) OS=Xenopus tropicalis GN=parn PE=2 SV=1
57 : F6UAK5_XENTR 0.87 0.95 8 94 436 522 87 0 0 525 F6UAK5 Uncharacterized protein OS=Xenopus tropicalis GN=parn PE=4 SV=1
58 : F6XLZ1_XENTR 0.87 0.95 8 94 438 524 87 0 0 634 F6XLZ1 Uncharacterized protein OS=Xenopus tropicalis GN=parn PE=4 SV=1
59 : Q28DE5_XENTR 0.87 0.94 8 94 228 314 87 0 0 424 Q28DE5 Novel protein similar to poly(A)-specific ribonuclease (Deadenylation nuclease) (Fragment) OS=Xenopus tropicalis GN=TEgg027a09.1-001 PE=2 SV=1
60 : W5LXE4_LEPOC 0.87 0.93 7 91 436 520 85 0 0 721 W5LXE4 Uncharacterized protein OS=Lepisosteus oculatus PE=4 SV=1
61 : G3Q7C0_GASAC 0.86 0.95 8 92 436 520 85 0 0 623 G3Q7C0 Uncharacterized protein OS=Gasterosteus aculeatus PE=4 SV=1
62 : F1REN3_DANRE 0.85 0.93 8 92 435 519 85 0 0 660 F1REN3 Poly(A)-specific ribonuclease PARN OS=Danio rerio GN=parn PE=4 SV=1
63 : H2UPI2_TAKRU 0.85 0.92 8 92 435 519 85 0 0 655 H2UPI2 Uncharacterized protein OS=Takifugu rubripes GN=LOC101073849 PE=4 SV=1
64 : H2UPI3_TAKRU 0.85 0.92 8 92 435 519 85 0 0 627 H2UPI3 Uncharacterized protein OS=Takifugu rubripes GN=LOC101073849 PE=4 SV=1
65 : H2UPI4_TAKRU 0.85 0.92 8 92 374 458 85 0 0 563 H2UPI4 Uncharacterized protein OS=Takifugu rubripes GN=LOC101073849 PE=4 SV=1
66 : PARN_DANRE 0.85 0.93 8 92 435 519 85 0 0 660 Q7ZU92 Poly(A)-specific ribonuclease PARN OS=Danio rerio GN=parn PE=1 SV=2
67 : R4GET9_DANRE 0.85 0.93 8 92 435 519 85 0 0 647 R4GET9 Poly(A)-specific ribonuclease PARN OS=Danio rerio GN=parn PE=4 SV=1
68 : H3CS48_TETNG 0.84 0.91 8 94 437 523 87 0 0 628 H3CS48 Uncharacterized protein OS=Tetraodon nigroviridis PE=4 SV=1
69 : W5KYX2_ASTMX 0.84 0.92 8 94 438 524 87 0 0 670 W5KYX2 Uncharacterized protein OS=Astyanax mexicanus PE=4 SV=1
70 : W5U5L5_ICTPU 0.84 0.91 8 94 436 522 87 0 0 656 W5U5L5 Poly(A)-specific ribonuclease PARN OS=Ictalurus punctatus GN=parn PE=2 SV=1
71 : H2MW75_ORYLA 0.81 0.92 8 92 308 392 85 0 0 403 H2MW75 Uncharacterized protein (Fragment) OS=Oryzias latipes GN=LOC101157188 PE=4 SV=1
72 : S4RGQ4_PETMA 0.80 0.90 8 90 435 517 83 0 0 523 S4RGQ4 Uncharacterized protein OS=Petromyzon marinus PE=4 SV=1
73 : I3IUA3_ORENI 0.78 0.90 8 100 437 529 93 0 0 679 I3IUA3 Uncharacterized protein OS=Oreochromis niloticus GN=parn PE=4 SV=1
74 : V8PDT5_OPHHA 0.77 0.90 2 92 535 625 91 0 0 734 V8PDT5 Poly(A)-specific ribonuclease PARN (Fragment) OS=Ophiophagus hannah GN=PARN PE=4 SV=1
75 : I3IUA4_ORENI 0.75 0.85 8 100 437 532 96 1 3 646 I3IUA4 Uncharacterized protein OS=Oreochromis niloticus GN=parn PE=4 SV=1
76 : M4AK71_XIPMA 0.75 0.88 7 98 437 528 92 0 0 622 M4AK71 Uncharacterized protein OS=Xiphophorus maculatus PE=4 SV=1
77 : H2Y4Q6_CIOSA 0.49 0.71 8 83 119 196 78 1 2 321 H2Y4Q6 Uncharacterized protein OS=Ciona savignyi PE=4 SV=1
78 : C3YC97_BRAFL 0.47 0.71 8 95 310 397 90 2 4 490 C3YC97 Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_125118 PE=4 SV=1
79 : E9IBK7_SOLIN 0.47 0.68 8 83 417 492 79 2 6 571 E9IBK7 Putative uncharacterized protein (Fragment) OS=Solenopsis invicta GN=SINV_07959 PE=4 SV=1
80 : A7S1J3_NEMVE 0.46 0.68 8 85 484 562 79 1 1 640 A7S1J3 Predicted protein OS=Nematostella vectensis GN=v1g205373 PE=4 SV=1
81 : G6CK75_DANPL 0.44 0.62 8 87 423 502 82 2 4 616 G6CK75 Putative poly OS=Danaus plexippus GN=KGM_16849 PE=4 SV=1
82 : E2AZW9_CAMFO 0.43 0.68 8 90 421 503 84 2 2 571 E2AZW9 Poly(A)-specific ribonuclease PARN OS=Camponotus floridanus GN=EAG_14348 PE=4 SV=1
83 : T1JBS2_STRMM 0.43 0.67 8 97 426 515 92 2 4 603 T1JBS2 Uncharacterized protein OS=Strigamia maritima PE=4 SV=1
84 : L7M4H9_9ACAR 0.42 0.69 8 86 466 549 84 2 5 637 L7M4H9 Putative polya-specific ribonuclease parn OS=Rhipicephalus pulchellus PE=2 SV=1
85 : E9HMS2_DAPPU 0.41 0.66 8 90 440 525 86 1 3 582 E9HMS2 Putative uncharacterized protein OS=Daphnia pulex GN=DAPPUDRAFT_203845 PE=4 SV=1
86 : V4BWG5_LOTGI 0.41 0.71 8 92 373 458 87 2 3 479 V4BWG5 Uncharacterized protein (Fragment) OS=Lottia gigantea GN=LOTGIDRAFT_216162 PE=4 SV=1
87 : E0VCB1_PEDHC 0.37 0.63 7 94 414 501 90 2 4 550 E0VCB1 Poly A-specific ribonuclease PARN, putative OS=Pediculus humanus subsp. corporis GN=Phum_PHUM082700 PE=4 SV=1
88 : K7IX58_NASVI 0.36 0.60 8 98 421 511 92 2 2 608 K7IX58 Uncharacterized protein OS=Nasonia vitripennis PE=4 SV=1
89 : R4G909_RHOPR 0.36 0.62 8 83 423 503 81 2 5 579 R4G909 Putative polya-specific exoribonuclease parn (Fragment) OS=Rhodnius prolixus PE=2 SV=1
90 : R4WEH9_9HEMI 0.35 0.63 9 87 412 494 83 2 4 499 R4WEH9 Poly(A)-specific ribonuclease (Fragment) OS=Riptortus pedestris PE=2 SV=1
91 : W5JD28_ANODA 0.33 0.63 8 89 438 519 82 0 0 566 W5JD28 PolyA-specific ribonuclease OS=Anopheles darlingi GN=AND_007077 PE=4 SV=1
92 : T1KBC6_TETUR 0.31 0.61 15 100 438 526 89 1 3 564 T1KBC6 Uncharacterized protein OS=Tetranychus urticae PE=4 SV=1
## ALIGNMENTS 1 - 70
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 423 A G 0 0 138 1 0
2 424 A S - 0 0 123 2 60
3 425 A S + 0 0 120 2 73
4 426 A G S S- 0 0 77 2 53
5 427 A S + 0 0 132 2 53
6 428 A S - 0 0 116 2 0
7 429 A G + 0 0 69 5 33 S
8 430 A G + 0 0 64 90 3 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGG GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
9 431 A P S S- 0 0 128 92 45 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
10 432 A D - 0 0 160 92 8 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
11 433 A L - 0 0 163 92 54 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
12 434 A Q - 0 0 125 92 52 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQKKQQQQQQQQQQQQQQQQQQ
13 435 A P - 0 0 98 92 8 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
14 436 A K - 0 0 186 92 57 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
15 437 A R + 0 0 88 93 0 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
16 438 A D + 0 0 70 93 24 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
17 439 A H S S+ 0 0 69 93 20 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHNHHHNHHNNNNHHHNNNHHNHN
18 440 A V E -A 55 0A 15 93 3 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
19 441 A L E -AB 54 79A 0 93 15 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
20 442 A H E -AB 53 78A 3 93 36 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHYHHHYYHHHHYFYYYYYYYYY
21 443 A V E -AB 52 77A 0 93 19 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
22 444 A T E + B 0 76A 46 93 29 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTRRATTAAAATTTTTTTTTTT
23 445 A F - 0 0 4 93 3 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
24 446 A P > - 0 0 32 93 0 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
25 447 A K T 3 S+ 0 0 165 93 25 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
26 448 A E T 3 S+ 0 0 147 93 34 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
27 449 A W < - 0 0 39 93 0 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
28 450 A K >> - 0 0 126 93 20 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
29 451 A T H 3> S+ 0 0 61 93 60 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTSTTTTTTTTTSTTTTTTTTTTTTTTTTTTTTTT
30 452 A S H 3> S+ 0 0 66 93 36 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
31 453 A D H <> S+ 0 0 66 93 11 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
32 454 A L H X S+ 0 0 0 93 22 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
33 455 A Y H X S+ 0 0 92 93 65 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
34 456 A Q H < S+ 0 0 131 93 30 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQQQQQQQQQQQQQQQQQQQQ
35 457 A L H >< S+ 0 0 67 93 9 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
36 458 A F H >X S+ 0 0 5 93 1 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
37 459 A S T 3< + 0 0 60 93 29 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
38 460 A A T <4 S+ 0 0 91 93 48 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
39 461 A F T <4 S- 0 0 56 93 15 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
40 462 A G < + 0 0 30 93 6 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
41 463 A N S S+ 0 0 178 93 57 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
42 464 A I - 0 0 19 93 29 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
43 465 A Q - 0 0 119 93 59 QQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQQQQQQQQQQ
44 466 A I - 0 0 11 93 17 IIIIIIIIIIIIIIIIIIIIIIIVIIVIIIIIIIIIIIVVVVVVVVVIVVVVVVVVVVVVVVVVVVVVVV
45 467 A S E -C 53 0A 62 93 43 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSCSSSSSSSSSSSSSSSS
46 468 A W E +C 52 0A 119 93 0 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
47 469 A I E - 0 0A 81 93 27 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIILVIIIVVIIV
48 470 A D E > S-C 51 0A 96 93 36 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
49 471 A D T 3 S+ 0 0 93 93 13 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
50 472 A T T 3 S+ 0 0 51 93 20 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
51 473 A S E < + C 0 48A 22 93 24 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
52 474 A A E -AC 21 46A 0 93 6 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAVVAAAAAAAAAAAAAAAAAA
53 475 A F E -AC 20 45A 38 93 5 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
54 476 A V E -A 19 0A 1 93 12 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
55 477 A S E -A 18 0A 46 93 41 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSAASSCSSSSCSSSSSSSSSS
56 478 A L - 0 0 23 93 4 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
57 479 A S S S+ 0 0 127 93 66 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
58 480 A Q > - 0 0 92 93 54 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHQQHHHHQQQQQQQQQQQ
59 481 A P H >> S+ 0 0 77 93 74 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPARRPPTPPPPTTTTTTTTTVL
60 482 A E H >> S+ 0 0 136 93 42 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEDDDDDDDEDDDEEDEE
61 483 A Q H 3> S+ 0 0 48 93 41 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
62 484 A V H -B 19 0A 47 93 41 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
80 502 A Y H > S+ 0 0 59 93 0 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
81 503 A A H > S+ 0 0 67 93 53 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
82 504 A E H > S+ 0 0 73 93 48 EEEEEEEEEEEEDEEDEEEEEDEEEEEQEEEEDEDDEDEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEE
83 505 A Y H >X S+ 0 0 49 93 11 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
84 506 A V H 3X S+ 0 0 27 90 61 VVVVVMMMMVVVVVMVVVMMMVVVMMVVMMMMVMVVMVVVVVVVVVVVIVVVVIVVVVVVILVVVLLVMM
85 507 A G H 3< S+ 0 0 29 90 64 GGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGEEEEEEEEEGEEEEEEEEEEEEKQQQQQQQQQ
86 508 A K H << S+ 0 0 160 89 72 KKKKKKKKKKKKKRKKKKKKKKRKRRKKRRRRKRKKRKKKKKKKKKKKKKKKKKNKKKKNGSSSSSSSSS
87 509 A K H < S+ 0 0 140 88 33 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKKKRRKKK
88 510 A Q < - 0 0 145 86 62 QQQHQQQQQHHHHHQHQNQQQHQHQQHRQQQQQQRRQQYHHHHHHHHQNRQQNQQNNNNQQQQQQQQQHQ
89 511 A K - 0 0 182 86 56 KEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEEEEGEEEEEEEEEEDEEEEEEEEEEEQKDDDKKDKK
90 512 A G - 0 0 81 84 49 GGS EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEDNKKKNNKHN
91 513 A K S S+ 0 0 209 81 61 KKK KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKNNKKTSKKKNRKNNNIKKTEEETTDTT
92 514 A Q S S- 0 0 157 78 64 QQQ QQQQQQQQQQQQHQQQQQQQQQQQQQQQQQQQQQQQQRRQQRQQQRQQ K QQQQ EHKKKHHKHH
93 515 A V - 0 0 121 66 81 VVV IIIIIIIISMISIIIIIIIIIITIIIIINIMMIIAAAAAAAAAIT II TTTT ETT
94 516 A K - 0 0 166 66 42 KKK KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK KK KKKK KNH
95 517 A S - 0 0 96 8 76
96 518 A G + 0 0 33 7 80
97 519 A P + 0 0 120 7 71
98 520 A S S S- 0 0 46 6 78
99 521 A S 0 0 97 4 88
100 522 A G 0 0 105 4 49
## ALIGNMENTS 71 - 92
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....8....:....9....:....0....:....1....:....2....:....3....:....4
1 423 A G 0 0 138 1 0
2 424 A S - 0 0 123 2 60 G
3 425 A S + 0 0 120 2 73 P
4 426 A G S S- 0 0 77 2 53 D
5 427 A S + 0 0 132 2 53 C
6 428 A S - 0 0 116 2 0 S
7 429 A G + 0 0 69 5 33 S G G
8 430 A G + 0 0 64 90 3 GGGAGPGGGGGGGGGGGGG G
9 431 A P S S- 0 0 128 92 45 PPPFPDPQKPPKENPPKNLPK
10 432 A D - 0 0 160 92 8 DDDVDSDDDDDDDEDDDDDDE
11 433 A L - 0 0 163 92 54 LLLVLVLLPLPPEVLLEPPPP
12 434 A Q - 0 0 125 92 52 QKQQQQTKNKTNLIEQENQET
13 435 A P - 0 0 98 92 8 PPPPPPPPPPPPPPPAPPPPH
14 436 A K - 0 0 186 92 57 KNKKKKSNSATSPSSNDSSRS
15 437 A R + 0 0 88 93 0 RRRRRRRRRRRRRRRRRRRRRR
16 438 A D + 0 0 70 93 24 DDDDDDDDEDDDTSEDTEEDES
17 439 A H S S+ 0 0 69 93 20 HHHHHHHHHHHHHHHHGHHHHN
18 440 A V E -A 55 0A 15 93 3 VVVVVVVVVVVVVIIVVVVVIV
19 441 A L E -AB 54 79A 0 93 15 LLLLLLFFFFFFFLFFYFFFFF
20 442 A H E -AB 53 78A 3 93 36 YHYYYYHHHFHHHHYYHHHHYH
21 443 A V E -AB 52 77A 0 93 19 VVVVVVVVLLVIVAVLLVLIVL
22 444 A T E + B 0 76A 46 93 29 TTTSTTETTTTTKTTISTTSTT
23 445 A F - 0 0 4 93 3 FFFFFFFFFFFFFFFMFFFFFF
24 446 A P > - 0 0 32 93 0 PPPPPPPPPPPPPPPPPPPPPP
25 447 A K T 3 S+ 0 0 165 93 25 KKKKKKSKKSKKKMKKKKKSEP
26 448 A E T 3 S+ 0 0 147 93 34 EEEEEEVEESEEEESDEQASTT
27 449 A W < - 0 0 39 93 0 WWWWWWWWWWWWWWWWWWWWWW
28 450 A K >> - 0 0 126 93 20 KRKKKKKKKKKKKRKKKKTART
29 451 A T H 3> S+ 0 0 61 93 60 TTTTTTSSHYRHTALSRLSGTR
30 452 A S H 3> S+ 0 0 66 93 36 SSSSSSSNSVSTSNHNESQSGS
31 453 A D H <> S+ 0 0 66 93 11 DDDDDDDDDDDDDDDDHDQNDE
32 454 A L H X S+ 0 0 0 93 22 LLLLLLLLIIIILLIVILIIII
33 455 A Y H X S+ 0 0 92 93 65 YHYYYYRYSLSSVYFSSTSSVY
34 456 A Q H < S+ 0 0 131 93 30 QQQQQQQQQDQQQQHNESEKGD
35 457 A L H >< S+ 0 0 67 93 9 LLLLLLLLLLLLLLLLLLILKL
36 458 A F H >X S+ 0 0 5 93 1 FFFFFFFFFFFFFFFFFFFFFL
37 459 A S T 3< + 0 0 60 93 29 SSSSSSTRSSSSQNSTVSSSKS
38 460 A A T <4 S+ 0 0 91 93 48 AAAAAAPPPPPPPSVDNPPPPP
39 461 A F T <4 S- 0 0 56 93 15 FFFFFFVFFFFFFFHYCYFFFF
40 462 A G < + 0 0 30 93 6 GGGGGGGGGGGGGGGGGGGGGK
41 463 A N S S+ 0 0 178 93 57 NNNNNNQPGFQGSQTNYGGSSP
42 464 A I - 0 0 19 93 29 IIIIIIIIGVIGVIVVIAVVVG
43 465 A Q - 0 0 119 93 59 QQQHQQHYFYTYYTRQSYQQHQ
44 466 A I - 0 0 11 93 17 VVVVVVIIIVVIVIVVIVLLII
45 467 A S E -C 53 0A 62 93 43 SSSCSSSASSQSAHDFSAWYSG
46 468 A W E +C 52 0A 119 93 0 WWWWWWWWWWFWWWWWWWWWWW
47 469 A I E - 0 0A 81 93 27 IIIIIIIILLLLVITIILQLLI
48 470 A D E > S-C 51 0A 96 93 36 DDDDDDNDSNNSDNGDNSSSND
49 471 A D T 3 S+ 0 0 93 93 13 EDDDDDEDDDDDDSDDDDDDNS
50 472 A T T 3 S+ 0 0 51 93 20 TTTTTTTVTVTTNTTMTTTSTT
51 473 A S E < + C 0 48A 22 93 24 SSSSSSQSSSTSSQSSSTTTSS
52 474 A A E -AC 21 46A 0 93 6 AAAAAACAAAAAAAAAAAAAAA
53 475 A F E -AC 20 45A 38 93 5 FFFFFFWFYYFYFFFLFYWWFL
54 476 A V E -A 19 0A 1 93 12 VVVVVVVVVVIIVVVVVAAVVI
55 477 A S E -A 18 0A 46 93 41 CASSSSGAGSAGAATSKAGSSA
56 478 A L - 0 0 23 93 4 LLLLLLLLLLFLLMLLVLLLLL
57 479 A S S S+ 0 0 127 93 66 SSSSSSHNYASYNAHYNHHHHN
58 480 A Q > - 0 0 92 93 54 QKQQQQNKRVRRKSRKEREDND
59 481 A P H >> S+ 0 0 77 93 74 TTTPTTKKRRRRKSKKERKRRV
60 482 A E H >> S+ 0 0 136 93 42 DEDEDDTDDNDDNPEDHDSEIN
61 483 A Q H 3> S+ 0 0 48 93 41 QQQQQQQQQKLQQLNNLQELAG
62 484 A V H -B 19 0A 47 93 41 TTTTTTTRKSPKTSSTTKTSSS
80 502 A Y H > S+ 0 0 59 93 0 YYYYYYYYYYYYYYYYYYYYFY
81 503 A A H > S+ 0 0 67 93 53 ASAAAAKGAAVSDTEQNREHAR
82 504 A E H > S+ 0 0 73 93 48 EEEEEDEDNETNSTTSDDRRQA
83 505 A Y H >X S+ 0 0 49 93 11 YYYYYYYHHYYHYYYFFYYYFF
84 506 A V H 3X S+ 0 0 27 90 61 ILIHII K HKQIMVVRQ MTM
85 507 A G H 3< S+ 0 0 29 90 64 HQQEQQ D GIAETNTAA QQD
86 508 A K H << S+ 0 0 160 89 72 EQGKGG P PSKRSGLS EME
87 509 A K H < S+ 0 0 140 88 33 KGKKKK N KLH KKSV KKK
88 510 A Q < - 0 0 145 86 62 RQQEQQ T QG HKNE LS
89 511 A K - 0 0 182 86 56 QDQEQQ S TD KDKV DP
90 512 A G - 0 0 81 84 49 KGEEEE H DA NNNE S
91 513 A K S S+ 0 0 209 81 61 E KRKK G K EAE Q
92 514 A Q S S- 0 0 157 78 64 E EREE R T NDT V
93 515 A V - 0 0 121 66 81 K KK K T DV P
94 516 A K - 0 0 166 66 42 Q QL R R KT N
95 517 A S - 0 0 96 8 76 T TG P K K S
96 518 A G + 0 0 33 7 80 T TQ N V G
97 519 A P + 0 0 120 7 71 K KP S T K
98 520 A S S S- 0 0 46 6 78 T TA T R
99 521 A S 0 0 97 4 88 W W K
100 522 A G 0 0 105 4 49 G G S
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 423 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
2 424 A 0 0 0 0 0 0 0 50 0 0 50 0 0 0 0 0 0 0 0 0 2 0 0 0.693 23 0.40
3 425 A 0 0 0 0 0 0 0 0 0 50 50 0 0 0 0 0 0 0 0 0 2 0 0 0.693 23 0.27
4 426 A 0 0 0 0 0 0 0 50 0 0 0 0 0 0 0 0 0 0 0 50 2 0 0 0.693 23 0.47
5 427 A 0 0 0 0 0 0 0 0 0 0 50 0 50 0 0 0 0 0 0 0 2 0 0 0.693 23 0.47
6 428 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 2 0 0 0.000 0 1.00
7 429 A 0 0 0 0 0 0 0 60 0 0 40 0 0 0 0 0 0 0 0 0 5 0 0 0.673 22 0.67
8 430 A 0 0 0 0 0 0 0 98 1 1 0 0 0 0 0 0 0 0 0 0 90 0 0 0.122 4 0.97
9 431 A 0 1 0 0 1 0 0 0 0 88 0 0 0 0 0 4 1 1 2 1 92 0 0 0.577 19 0.54
10 432 A 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 2 0 96 92 0 0 0.224 7 0.92
11 433 A 3 87 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 2 0 0 92 0 0 0.512 17 0.45
12 434 A 0 1 1 0 0 0 0 0 0 0 0 3 0 0 0 5 83 3 3 0 92 0 0 0.749 25 0.48
13 435 A 0 0 0 0 0 0 0 0 1 98 0 0 0 1 0 0 0 0 0 0 92 0 0 0.120 3 0.92
14 436 A 0 0 0 0 0 0 0 0 1 1 9 1 0 0 1 83 0 0 3 1 92 0 0 0.728 24 0.43
15 437 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 93 0 0 0.000 0 1.00
16 438 A 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 5 0 90 93 0 0 0.414 13 0.75
17 439 A 0 0 0 0 0 0 0 1 0 0 0 0 0 86 0 0 0 0 13 0 93 0 0 0.442 14 0.79
18 440 A 97 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 93 0 0 0.143 4 0.96
19 441 A 0 84 0 0 15 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 93 0 0 0.481 16 0.85
20 442 A 0 0 0 0 2 0 23 0 0 0 0 0 0 75 0 0 0 0 0 0 93 0 0 0.632 21 0.64
21 443 A 90 6 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 93 0 0 0.400 13 0.80
22 444 A 0 0 1 0 0 0 0 0 5 0 3 86 0 0 2 1 0 1 0 0 93 0 0 0.626 20 0.70
23 445 A 0 0 0 1 99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 93 0 0 0.059 1 0.97
24 446 A 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 93 0 0 0.000 0 1.00
25 447 A 0 0 0 1 0 0 0 0 0 1 3 0 0 0 0 94 0 1 0 0 93 0 0 0.319 10 0.75
26 448 A 1 0 0 0 0 0 0 0 1 0 3 2 0 0 0 0 1 90 0 1 93 0 0 0.480 16 0.66
27 449 A 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 93 0 0 0.000 0 1.00
28 450 A 0 0 0 0 0 0 0 0 1 0 0 2 0 0 3 94 0 0 0 0 93 0 0 0.304 10 0.80
29 451 A 0 2 0 0 0 0 1 1 1 0 6 83 0 2 3 0 0 0 0 0 93 0 0 0.755 25 0.39
30 452 A 1 0 0 0 0 0 0 1 0 0 90 1 0 1 0 0 1 1 3 0 93 0 0 0.495 16 0.63
31 453 A 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 1 1 96 93 0 0 0.237 7 0.89
32 454 A 1 88 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 93 0 0 0.400 13 0.77
33 455 A 2 1 0 0 1 0 85 0 0 0 8 1 0 1 1 0 0 0 0 0 93 0 0 0.660 22 0.35
34 456 A 0 0 0 0 0 0 0 1 0 0 1 0 0 1 1 1 89 2 1 2 93 0 0 0.559 18 0.69
35 457 A 0 98 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 93 0 0 0.119 3 0.91
36 458 A 0 1 0 0 99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 93 0 0 0.059 1 0.99
37 459 A 1 0 0 0 0 0 0 0 0 0 92 2 0 0 1 1 1 0 1 0 93 0 0 0.399 13 0.71
38 460 A 1 0 0 0 0 0 0 0 83 13 1 0 0 0 0 0 0 0 1 1 93 0 0 0.615 20 0.52
39 461 A 1 0 0 0 95 0 2 0 0 0 0 0 1 1 0 0 0 0 0 0 93 0 0 0.281 9 0.85
40 462 A 0 0 0 0 0 0 0 99 0 0 0 0 0 0 0 1 0 0 0 0 93 0 0 0.059 1 0.94
41 463 A 0 0 0 0 1 0 1 4 0 2 4 1 0 0 0 0 3 0 83 0 93 0 0 0.767 25 0.42
42 464 A 8 0 88 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 93 0 0 0.465 15 0.70
43 465 A 0 0 0 0 1 0 5 0 0 0 1 2 0 5 1 0 84 0 0 0 93 0 0 0.691 23 0.40
44 466 A 48 2 49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 93 0 0 0.782 26 0.82
45 467 A 0 0 0 0 1 1 1 1 3 0 87 0 2 1 0 0 1 0 0 1 93 0 0 0.655 21 0.56
46 468 A 0 0 0 0 1 99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 93 0 0 0.059 1 0.99
47 469 A 5 9 84 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 93 0 0 0.613 20 0.72
48 470 A 0 0 0 0 0 0 0 1 0 0 5 0 0 0 0 0 0 0 6 87 93 0 0 0.503 16 0.64
49 471 A 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 2 1 95 93 0 0 0.266 8 0.86
50 472 A 2 0 0 1 0 0 0 0 0 0 1 95 0 0 0 0 0 0 1 0 93 0 0 0.281 9 0.80
51 473 A 0 0 0 0 0 0 0 0 0 0 94 4 0 0 0 0 2 0 0 0 93 0 0 0.280 9 0.75
52 474 A 2 0 0 0 0 0 0 0 97 0 0 0 1 0 0 0 0 0 0 0 93 0 0 0.163 5 0.94
53 475 A 0 2 0 0 90 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 93 0 0 0.421 14 0.94
54 476 A 95 0 3 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 93 0 0 0.246 8 0.87
55 477 A 0 0 0 0 0 0 0 4 10 0 81 1 3 0 0 1 0 0 0 0 93 0 0 0.743 24 0.58
56 478 A 1 97 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 93 0 0 0.178 5 0.96
57 479 A 0 0 0 0 0 0 3 0 2 0 84 0 0 6 0 0 0 0 4 0 93 0 0 0.653 21 0.34
58 480 A 1 0 0 0 0 0 0 0 0 0 1 0 0 5 5 4 76 2 2 2 93 0 0 1.001 33 0.45
59 481 A 2 1 0 0 0 0 0 0 1 61 1 16 0 0 10 6 0 1 0 0 93 0 0 1.275 42 0.25
60 482 A 0 0 1 0 0 0 0 0 0 1 1 1 0 1 0 0 0 68 3 24 93 0 0 0.959 32 0.58
61 483 A 0 4 0 0 0 0 0 1 1 0 0 0 0 0 0 1 89 1 2 0 93 0 0 0.514 17 0.58
62 484 A 85 0 1 0 0 1 0 1 6 0 3 1 1 0 0 0 0 0 0 0 93 0 0 0.670 22 0.45
63 485 A 0 0 0 0 0 0 0 0 0 8 3 1 0 1 1 19 62 1 2 1 93 0 0 1.244 41 0.38
64 486 A 4 1 82 0 1 0 0 1 3 0 1 0 0 0 1 1 1 0 2 1 93 0 0 0.884 29 0.37
65 487 A 11 0 1 0 0 0 0 0 87 0 0 0 0 0 0 1 0 0 0 0 93 0 0 0.458 15 0.56
66 488 A 70 5 1 15 0 0 2 0 0 1 0 0 0 0 0 3 0 0 1 1 93 4 11 1.081 36 0.43
67 489 A 0 1 0 0 0 0 0 1 2 0 2 1 0 0 0 1 0 2 89 0 89 0 0 0.563 18 0.55
68 490 A 0 3 1 0 0 0 0 0 0 0 3 87 0 0 0 1 1 1 1 1 90 0 0 0.651 21 0.44
69 491 A 0 0 2 0 0 0 0 2 1 0 86 1 0 0 2 2 1 0 1 1 93 0 0 0.703 23 0.49
70 492 A 1 1 0 1 0 0 0 1 1 0 1 3 0 0 29 58 2 0 1 0 93 0 0 1.209 40 0.43
71 493 A 1 3 0 0 3 0 84 0 0 0 2 1 0 0 0 0 1 1 3 0 93 0 0 0.757 25 0.43
72 494 A 0 1 0 0 0 0 1 1 84 1 1 5 1 1 0 2 0 0 0 1 93 4 8 0.777 25 0.43
73 495 A 2 0 0 0 0 0 0 0 1 2 1 2 0 0 1 0 0 88 0 2 89 0 0 0.608 20 0.50
74 496 A 1 0 1 0 0 0 0 4 0 1 87 2 0 1 1 0 0 0 1 0 91 0 0 0.641 21 0.52
75 497 A 3 0 0 0 2 0 90 0 0 0 0 0 4 0 0 0 0 0 0 0 92 0 0 0.424 14 0.77
76 498 A 0 0 0 0 0 0 0 0 1 0 2 5 0 1 83 4 0 1 2 0 93 0 0 0.760 25 0.42
77 499 A 5 4 90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 93 0 0 0.384 12 0.85
78 500 A 1 0 2 0 0 0 0 0 0 0 0 1 0 1 4 2 87 0 0 1 93 0 0 0.616 20 0.54
79 501 A 0 0 0 0 0 0 0 0 0 1 6 88 0 0 1 3 0 0 0 0 93 0 0 0.496 16 0.58
80 502 A 0 0 0 0 1 0 99 0 0 0 0 0 0 0 0 0 0 0 0 0 93 0 0 0.059 1 1.00
81 503 A 1 0 0 0 0 0 0 1 85 0 2 1 0 1 2 1 1 2 1 1 93 0 0 0.776 25 0.46
82 504 A 0 0 0 0 0 0 0 0 1 0 2 3 0 0 2 0 2 74 2 13 93 0 0 0.975 32 0.52
83 505 A 0 0 0 0 4 0 92 0 0 0 0 0 0 3 0 0 0 0 0 0 93 0 0 0.318 10 0.88
84 506 A 54 4 9 23 0 0 0 0 0 0 0 1 0 2 1 2 2 0 0 0 90 0 0 1.378 45 0.39
85 507 A 0 0 1 0 0 0 0 44 3 0 0 2 0 1 0 1 17 27 1 2 90 0 0 1.494 49 0.36
86 508 A 0 1 0 1 0 0 0 6 0 2 13 0 0 0 12 57 1 3 2 0 89 0 0 1.446 48 0.27
87 509 A 1 1 0 0 0 0 0 1 0 0 1 0 0 1 3 90 0 0 1 0 88 0 0 0.517 17 0.67
88 510 A 0 1 0 0 0 0 1 1 0 0 1 1 0 23 6 1 52 2 9 0 86 0 0 1.463 48 0.37
89 511 A 1 0 0 0 0 0 0 1 0 1 1 1 0 0 0 10 6 66 0 12 86 0 0 1.183 39 0.44
90 512 A 0 0 0 0 0 0 0 5 1 0 2 0 0 2 0 6 0 71 8 4 84 0 0 1.110 37 0.50
91 513 A 0 0 1 0 0 0 0 1 1 0 1 7 0 0 2 68 1 7 7 1 81 0 0 1.258 41 0.39
92 514 A 1 0 0 0 0 0 0 0 0 0 0 3 0 8 8 6 65 6 1 1 78 0 0 1.286 42 0.35
93 515 A 8 0 45 5 0 0 0 0 14 2 3 14 0 0 0 6 0 2 2 2 66 0 0 1.768 59 0.18
94 516 A 0 2 0 0 0 0 0 0 0 0 0 2 0 2 3 86 3 0 3 0 66 0 0 0.635 21 0.57
95 517 A 0 0 0 0 0 0 0 13 0 13 25 25 0 0 0 25 0 0 0 0 8 0 0 1.560 52 0.24
96 518 A 14 0 0 0 0 0 0 29 0 0 0 29 0 0 0 0 14 0 14 0 7 0 0 1.550 51 0.20
97 519 A 0 0 0 0 0 0 0 0 0 29 14 14 0 0 0 43 0 0 0 0 7 0 0 1.277 42 0.29
98 520 A 0 0 0 0 0 0 0 0 17 0 17 50 0 0 17 0 0 0 0 0 6 0 0 1.242 41 0.22
99 521 A 0 0 0 0 0 50 0 0 0 0 25 0 0 0 0 25 0 0 0 0 4 0 0 1.040 34 0.11
100 522 A 0 0 0 0 0 0 0 75 0 0 25 0 0 0 0 0 0 0 0 0 4 0 0 0.562 18 0.51
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
75 60 496 3 nTAMn
77 66 184 2 gSYd
78 64 373 2 cEGv
79 60 476 3 mTNLs
80 60 543 1 lDa
81 64 486 2 aGDr
82 60 480 1 mQa
83 64 489 2 tQSe
84 60 525 3 lKKLg
84 66 534 2 tTQd
85 60 499 3 lSAMn
86 60 432 2 yNGl
87 61 474 2 kIIs
88 65 485 1 kSt
89 60 482 3 iKDLe
89 66 491 2 kLPp
90 59 470 3 lQSLe
90 65 479 1 lPt
92 53 490 3 dRVLt
//