Complet list of 1wev hssp file
Complete list of 1wev.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1WEV
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-12
HEADER GENE REGULATION 25-MAY-04 1WEV
COMPND MOL_ID: 1; MOLECULE: RIKEN CDNA 1110020M19; CHAIN: A; FRAGMENT: PHD DO
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: MUS MUSCULUS; ORGANISM_COMMON: HOUSE M
AUTHOR F.HE,Y.MUTO,M.INOUE,T.KIGAWA,M.SHIROUZU,T.TERADA,S.YOKOYAMA, RIKEN STR
DBREF 1WEV A 8 82 UNP Q9D168 PHF22_MOUSE 150 224
SEQLENGTH 88
NCHAIN 1 chain(s) in 1WEV data set
NALIGN 93
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : G9K5W7_MUSPF 0.91 0.95 8 88 154 234 81 0 0 242 G9K5W7 Integrator complex subunit 12 (Fragment) OS=Mustela putorius furo PE=2 SV=1
2 : G3IKM7_CRIGR 0.90 0.95 7 88 46 127 82 0 0 358 G3IKM7 Integrator complex subunit 12 OS=Cricetulus griseus GN=I79_024430 PE=4 SV=1
3 : D2HPF2_AILME 0.89 0.95 6 88 149 231 83 0 0 462 D2HPF2 Uncharacterized protein (Fragment) OS=Ailuropoda melanoleuca GN=LOC100468683 PE=4 SV=1
4 : E2R963_CANFA 0.89 0.95 6 88 149 231 83 0 0 462 E2R963 Uncharacterized protein OS=Canis familiaris GN=INTS12 PE=4 SV=1
5 : F7D073_HORSE 0.89 0.95 6 88 149 231 83 0 0 462 F7D073 Uncharacterized protein OS=Equus caballus GN=INTS12 PE=4 SV=1
6 : G1QCI4_MYOLU 0.89 0.95 6 88 149 231 83 0 0 462 G1QCI4 Uncharacterized protein OS=Myotis lucifugus PE=4 SV=1
7 : G1T132_RABIT 0.89 0.95 6 88 149 231 83 0 0 462 G1T132 Uncharacterized protein OS=Oryctolagus cuniculus GN=LOC100337826 PE=4 SV=1
8 : G3T4Y6_LOXAF 0.89 0.96 6 88 149 231 83 0 0 462 G3T4Y6 Uncharacterized protein OS=Loxodonta africana GN=INTS12 PE=4 SV=1
9 : G3VLG8_SARHA 0.89 0.96 6 88 149 231 83 0 0 464 G3VLG8 Uncharacterized protein OS=Sarcophilus harrisii GN=INTS12 PE=4 SV=1
10 : G5AT22_HETGA 0.89 0.95 6 88 149 231 83 0 0 462 G5AT22 Integrator complex subunit 12 OS=Heterocephalus glaber GN=GW7_03022 PE=4 SV=1
11 : H0VDX3_CAVPO 0.89 0.95 6 88 149 231 83 0 0 462 H0VDX3 Uncharacterized protein OS=Cavia porcellus GN=INTS12 PE=4 SV=1
12 : H0WS73_OTOGA 0.89 0.95 6 88 149 231 83 0 0 462 H0WS73 Uncharacterized protein OS=Otolemur garnettii GN=INTS12 PE=4 SV=1
13 : INT12_MOUSE 1WEV 0.89 0.95 6 88 148 230 83 0 0 461 Q9D168 Integrator complex subunit 12 OS=Mus musculus GN=Ints12 PE=1 SV=1
14 : INT12_RAT 0.89 0.95 6 88 148 230 83 0 0 461 Q68FR3 Integrator complex subunit 12 OS=Rattus norvegicus GN=Ints12 PE=2 SV=1
15 : K9J136_DESRO 0.89 0.95 6 88 149 231 83 0 0 462 K9J136 Putative integrator complex subunit 12 OS=Desmodus rotundus PE=2 SV=1
16 : K9KBR6_HORSE 0.89 0.95 6 88 175 257 83 0 0 488 K9KBR6 Integrator complex subunit 12-like protein OS=Equus caballus PE=2 SV=1
17 : L5K4Y8_PTEAL 0.89 0.95 6 88 165 247 83 0 0 478 L5K4Y8 Integrator complex subunit 12 OS=Pteropus alecto GN=PAL_GLEAN10022585 PE=4 SV=1
18 : M3WSY3_FELCA 0.89 0.95 6 88 149 231 83 0 0 462 M3WSY3 Uncharacterized protein OS=Felis catus GN=INTS12 PE=4 SV=1
19 : M3YC69_MUSPF 0.89 0.95 6 88 149 231 83 0 0 462 M3YC69 Uncharacterized protein OS=Mustela putorius furo GN=INTS12 PE=4 SV=1
20 : S9YB32_9CETA 0.89 0.95 6 88 155 237 83 0 0 468 S9YB32 PHD finger protein 22-like protein OS=Camelus ferus GN=CB1_000750006 PE=4 SV=1
21 : U6CUH2_NEOVI 0.89 0.95 6 88 149 231 83 0 0 462 U6CUH2 Integrator complex subunit 12 OS=Neovison vison GN=INT12 PE=2 SV=1
22 : W5PKE0_SHEEP 0.89 0.95 6 88 149 231 83 0 0 462 W5PKE0 Uncharacterized protein OS=Ovis aries GN=INTS12 PE=4 SV=1
23 : E1C843_CHICK 0.88 0.94 6 88 149 231 83 0 0 463 E1C843 Uncharacterized protein OS=Gallus gallus GN=INTS12 PE=4 SV=2
24 : F6PVB6_XENTR 0.88 0.96 6 88 146 228 83 0 0 466 F6PVB6 Integrator complex subunit 12 OS=Xenopus tropicalis GN=ints12 PE=4 SV=1
25 : G1N2V8_MELGA 0.88 0.94 6 88 149 231 83 0 0 464 G1N2V8 Uncharacterized protein OS=Meleagris gallopavo GN=INTS12 PE=4 SV=1
26 : G1PIZ5_MYOLU 0.88 0.95 6 88 149 231 83 0 0 462 G1PIZ5 Uncharacterized protein OS=Myotis lucifugus PE=4 SV=1
27 : INT12_BOVIN 0.88 0.94 6 88 149 231 83 0 0 462 Q32LL5 Integrator complex subunit 12 OS=Bos taurus GN=INTS12 PE=2 SV=1
28 : INT12_XENTR 0.88 0.96 6 88 146 228 83 0 0 466 Q0V9U1 Integrator complex subunit 12 OS=Xenopus tropicalis GN=ints12 PE=2 SV=1
29 : L9KMD4_TUPCH 0.88 0.95 6 88 162 244 83 0 0 475 L9KMD4 Integrator complex subunit 12 OS=Tupaia chinensis GN=TREES_T100004017 PE=4 SV=1
30 : M7BY76_CHEMY 0.88 0.95 6 88 149 231 83 0 0 463 M7BY76 Integrator complex subunit 12 (Fragment) OS=Chelonia mydas GN=UY3_01901 PE=4 SV=1
31 : R0KQC9_ANAPL 0.88 0.94 6 88 149 231 83 0 0 463 R0KQC9 Integrator complex subunit 12 (Fragment) OS=Anas platyrhynchos GN=INTS12 PE=4 SV=1
32 : F6ZJL9_ORNAN 0.87 0.95 6 88 149 231 83 0 0 269 F6ZJL9 Uncharacterized protein OS=Ornithorhynchus anatinus GN=INTS12 PE=4 SV=1
33 : F7F3Z9_MONDO 0.87 0.95 4 88 268 352 85 0 0 584 F7F3Z9 Uncharacterized protein OS=Monodelphis domestica GN=INTS12 PE=4 SV=2
34 : G3RCE1_GORGO 0.87 0.93 7 88 98 179 82 0 0 410 G3RCE1 Uncharacterized protein (Fragment) OS=Gorilla gorilla gorilla GN=101133512 PE=4 SV=1
35 : INT12_XENLA 0.87 0.96 6 88 146 228 83 0 0 464 Q6DJM6 Integrator complex subunit 12 OS=Xenopus laevis GN=ints12 PE=2 SV=1
36 : K7FR60_PELSI 0.87 0.95 6 88 149 231 83 0 0 463 K7FR60 Uncharacterized protein OS=Pelodiscus sinensis GN=INTS12 PE=4 SV=1
37 : L8HX23_9CETA 0.87 0.93 6 88 149 230 83 1 1 461 L8HX23 Integrator complex subunit 12 OS=Bos mutus GN=M91_16425 PE=4 SV=1
38 : W5N4H8_LEPOC 0.87 0.95 6 88 150 232 83 0 0 479 W5N4H8 Uncharacterized protein OS=Lepisosteus oculatus PE=4 SV=1
39 : F7HA32_MACMU 0.86 0.93 6 88 149 231 83 0 0 462 F7HA32 Integrator complex subunit 12 OS=Macaca mulatta GN=INTS12 PE=2 SV=1
40 : F7HYK2_CALJA 0.86 0.93 6 88 149 231 83 0 0 462 F7HYK2 Integrator complex subunit 12 OS=Callithrix jacchus GN=INTS12 PE=2 SV=1
41 : F7HYK4_CALJA 0.86 0.93 6 88 149 231 83 0 0 444 F7HYK4 Uncharacterized protein OS=Callithrix jacchus GN=INTS12 PE=4 SV=1
42 : G1RRS9_NOMLE 0.86 0.93 6 88 149 231 83 0 0 462 G1RRS9 Uncharacterized protein OS=Nomascus leucogenys GN=INTS12 PE=4 SV=1
43 : G7P614_MACFA 0.86 0.93 6 88 149 231 83 0 0 462 G7P614 Putative uncharacterized protein OS=Macaca fascicularis GN=EGM_14591 PE=4 SV=1
44 : H0Z054_TAEGU 0.86 0.93 6 88 147 229 83 0 0 464 H0Z054 Uncharacterized protein OS=Taeniopygia guttata GN=INTS12 PE=4 SV=1
45 : H2PE18_PONAB 0.86 0.93 6 88 149 231 83 0 0 462 H2PE18 Integrator complex subunit 12 OS=Pongo abelii GN=INTS12 PE=4 SV=1
46 : H2QPZ8_PANTR 0.86 0.93 6 88 149 231 83 0 0 462 H2QPZ8 Integrator complex subunit 12 OS=Pan troglodytes GN=INTS12 PE=2 SV=1
47 : H9F9G6_MACMU 0.86 0.93 6 88 137 219 83 0 0 450 H9F9G6 Integrator complex subunit 12 (Fragment) OS=Macaca mulatta GN=INTS12 PE=2 SV=1
48 : INT12_HUMAN 0.86 0.93 6 88 149 231 83 0 0 462 Q96CB8 Integrator complex subunit 12 OS=Homo sapiens GN=INTS12 PE=1 SV=1
49 : INT12_MACFA 0.86 0.93 6 88 149 231 83 0 0 462 Q8WNV2 Integrator complex subunit 12 OS=Macaca fascicularis GN=INTS12 PE=2 SV=1
50 : INT12_PONAB 0.86 0.93 6 88 149 231 83 0 0 462 Q5RCV7 Integrator complex subunit 12 OS=Pongo abelii GN=INTS12 PE=2 SV=1
51 : K7C4C6_PANTR 0.86 0.93 6 88 149 231 83 0 0 462 K7C4C6 Integrator complex subunit 12 OS=Pan troglodytes GN=INTS12 PE=2 SV=1
52 : U3BZM0_CALJA 0.86 0.93 6 88 149 231 83 0 0 462 U3BZM0 Integrator complex subunit 12 OS=Callithrix jacchus GN=INTS12 PE=2 SV=1
53 : U3K0R1_FICAL 0.86 0.93 6 88 147 229 83 0 0 460 U3K0R1 Uncharacterized protein OS=Ficedula albicollis GN=INTS12 PE=4 SV=1
54 : V9KC34_CALMI 0.85 0.93 4 88 144 228 85 0 0 454 V9KC34 Integrator complex subunit 12 OS=Callorhynchus milii PE=2 SV=1
55 : G3PZY0_GASAC 0.84 0.93 6 88 151 233 83 0 0 457 G3PZY0 Uncharacterized protein OS=Gasterosteus aculeatus PE=4 SV=1
56 : G3PZY3_GASAC 0.84 0.93 6 88 140 222 83 0 0 437 G3PZY3 Uncharacterized protein OS=Gasterosteus aculeatus PE=4 SV=1
57 : H9GE14_ANOCA 0.84 0.95 6 88 149 231 83 0 0 462 H9GE14 Uncharacterized protein OS=Anolis carolinensis GN=INTS12 PE=4 SV=1
58 : INT12_DANRE 0.84 0.93 4 88 149 233 85 0 0 479 Q6IQU7 Integrator complex subunit 12 OS=Danio rerio GN=ints12 PE=2 SV=1
59 : H3DL00_TETNG 0.83 0.93 6 88 148 230 83 0 0 456 H3DL00 Uncharacterized protein OS=Tetraodon nigroviridis PE=4 SV=1
60 : W5UB18_ICTPU 0.83 0.92 3 88 153 238 86 0 0 467 W5UB18 Integrator complex subunit 12 OS=Ictalurus punctatus GN=ints12 PE=2 SV=1
61 : H2LQD2_ORYLA 0.82 0.87 6 88 147 229 83 0 0 456 H2LQD2 Uncharacterized protein OS=Oryzias latipes GN=LOC101165697 PE=4 SV=1
62 : M4ACL7_XIPMA 0.82 0.93 6 88 148 230 83 0 0 446 M4ACL7 Uncharacterized protein OS=Xiphophorus maculatus PE=4 SV=1
63 : Q4RJE5_TETNG 0.81 0.92 4 88 180 264 85 0 0 496 Q4RJE5 Chromosome 18 SCAF15038, whole genome shotgun sequence OS=Tetraodon nigroviridis GN=GSTENG00033463001 PE=4 SV=1
64 : H2SKT5_TAKRU 0.80 0.89 6 88 149 233 85 1 2 453 H2SKT5 Uncharacterized protein OS=Takifugu rubripes GN=LOC101062861 PE=4 SV=1
65 : I3KLV8_ORENI 0.79 0.89 2 88 141 227 87 0 0 453 I3KLV8 Uncharacterized protein OS=Oreochromis niloticus GN=LOC100706846 PE=4 SV=1
66 : S4RDL1_PETMA 0.71 0.90 3 88 142 227 86 0 0 486 S4RDL1 Uncharacterized protein (Fragment) OS=Petromyzon marinus PE=4 SV=1
67 : T1JLY1_STRMM 0.65 0.87 6 88 148 230 83 0 0 407 T1JLY1 Uncharacterized protein OS=Strigamia maritima PE=4 SV=1
68 : H2ZER8_CIOSA 0.63 0.80 2 86 137 222 86 1 1 256 H2ZER8 Uncharacterized protein OS=Ciona savignyi GN=Csa.5374 PE=4 SV=1
69 : C3XW80_BRAFL 0.61 0.81 6 88 158 240 83 0 0 441 C3XW80 Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_63748 PE=4 SV=1
70 : V4AEU5_LOTGI 0.56 0.84 2 83 1 82 82 0 0 83 V4AEU5 Uncharacterized protein (Fragment) OS=Lottia gigantea GN=LOTGIDRAFT_116799 PE=4 SV=1
71 : B7PUD8_IXOSC 0.55 0.83 1 88 165 252 88 0 0 387 B7PUD8 Integrator complex subunit, putative (Fragment) OS=Ixodes scapularis GN=IscW_ISCW019629 PE=4 SV=1
72 : L7LTP6_9ACAR 0.55 0.81 1 88 165 252 88 0 0 443 L7LTP6 Uncharacterized protein OS=Rhipicephalus pulchellus PE=2 SV=1
73 : L7M844_9ACAR 0.55 0.81 1 88 165 252 88 0 0 421 L7M844 Uncharacterized protein OS=Rhipicephalus pulchellus PE=2 SV=1
74 : V5IE73_IXORI 0.55 0.83 1 88 165 252 88 0 0 309 V5IE73 Putative polycomb-like phd zn-finger protein (Fragment) OS=Ixodes ricinus PE=2 SV=1
75 : H2XXT7_CIOIN 0.54 0.83 1 80 141 221 81 1 1 435 H2XXT7 Uncharacterized protein OS=Ciona intestinalis GN=LOC100186304 PE=4 SV=1
76 : R7TWY4_CAPTE 0.54 0.79 7 83 192 268 78 2 2 435 R7TWY4 Uncharacterized protein OS=Capitella teleta GN=CAPTEDRAFT_219293 PE=4 SV=1
77 : T1KZ72_TETUR 0.54 0.80 2 88 123 209 87 0 0 375 T1KZ72 Uncharacterized protein OS=Tetranychus urticae PE=4 SV=1
78 : K1QDW1_CRAGI 0.53 0.82 1 83 174 256 83 0 0 514 K1QDW1 Integrator complex subunit 12 OS=Crassostrea gigas GN=CGI_10007854 PE=4 SV=1
79 : E9GLT5_DAPPU 0.51 0.76 8 88 65 146 82 1 1 240 E9GLT5 Putative uncharacterized protein OS=Daphnia pulex GN=DAPPUDRAFT_52309 PE=4 SV=1
80 : A7SYY9_NEMVE 0.49 0.78 9 74 1 67 67 1 1 67 A7SYY9 Predicted protein (Fragment) OS=Nematostella vectensis GN=v1g138493 PE=4 SV=1
81 : T2M825_HYDVU 0.47 0.67 19 88 36 105 70 0 0 134 T2M825 Integrator complex subunit 12 (Fragment) OS=Hydra vulgaris GN=INTS12 PE=2 SV=1
82 : B3RLD5_TRIAD 0.43 0.65 7 86 116 195 80 0 0 288 B3RLD5 Putative uncharacterized protein OS=Trichoplax adhaerens GN=TRIADDRAFT_51968 PE=4 SV=1
83 : E0VMJ4_PEDHC 0.42 0.66 15 85 132 198 71 2 4 328 E0VMJ4 Integrator complex subunit, putative OS=Pediculus humanus subsp. corporis GN=Phum_PHUM310960 PE=4 SV=1
84 : D7EJN8_TRICA 0.40 0.62 16 88 92 161 73 1 3 266 D7EJN8 Putative uncharacterized protein OS=Tribolium castaneum GN=TcasGA2_TC001873 PE=4 SV=1
85 : J9LTL7_ACYPI 0.39 0.67 4 78 119 193 75 0 0 273 J9LTL7 Uncharacterized protein OS=Acyrthosiphon pisum GN=LOC100574139 PE=4 SV=1
86 : C1BUB6_LEPSM 0.38 0.73 4 88 113 198 86 1 1 317 C1BUB6 Integrator complex subunit 12 OS=Lepeophtheirus salmonis GN=INT12 PE=2 SV=1
87 : E2AY64_CAMFO 0.37 0.58 13 81 132 198 71 3 6 245 E2AY64 Integrator complex subunit 12 OS=Camponotus floridanus GN=EAG_05964 PE=4 SV=1
88 : H3ATN0_LATCH 0.36 0.56 4 87 147 229 86 3 5 461 H3ATN0 Uncharacterized protein OS=Latimeria chalumnae PE=4 SV=1
89 : G0S6H6_CHATD 0.34 0.58 14 86 763 834 73 1 1 1030 G0S6H6 Putative uncharacterized protein OS=Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) GN=CTHT_0034950 PE=4 SV=1
90 : U6P512_HAECO 0.34 0.59 3 72 983 1051 70 1 1 1112 U6P512 Ribosomal protein L4 L1e and Serine threonine protein kinase-related and Zinc finger domain containing protein OS=Haemonchus contortus GN=HCOI_00485100 PE=4 SV=1
91 : G0PGS3_CAEBE 0.33 0.59 19 88 146 214 70 1 1 227 G0PGS3 Putative uncharacterized protein OS=Caenorhabditis brenneri GN=CAEBREN_21295 PE=4 SV=1
92 : N6U492_DENPD 0.33 0.57 1 88 74 159 89 2 4 227 N6U492 Uncharacterized protein (Fragment) OS=Dendroctonus ponderosae GN=D910_11375 PE=4 SV=1
93 : J3NVS1_GAGT3 0.32 0.59 14 86 334 405 73 1 1 570 J3NVS1 Uncharacterized protein OS=Gaeumannomyces graminis var. tritici (strain R3-111a-1) GN=GGTG_05384 PE=4 SV=1
## ALIGNMENTS 1 - 70
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A G 0 0 134 8 44
2 2 A S - 0 0 132 12 70 N S N
3 3 A S + 0 0 125 15 72 S DS S K
4 4 A G - 0 0 81 22 55 D G D D D DD P G
5 5 A S - 0 0 125 22 66 E F E E E EE M G
6 6 A S + 0 0 125 80 50 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTTTTTTTTTTTTTTTTTTETTTTTTTTTTTTSTTM
7 7 A G - 0 0 76 84 55 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSNNSNNNNNNNSNDSSD
8 8 A A - 0 0 89 86 47 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
9 9 A D - 0 0 131 87 37 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDEDDDDDDDDDDDDEDDD
10 10 A D + 0 0 130 87 8 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDED
11 11 A F >> - 0 0 150 87 20 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
12 12 A A H 3> S+ 0 0 30 87 40 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAVEAA
13 13 A M H >4 S+ 0 0 123 88 39 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMLEF
14 14 A E H <4 S+ 0 0 116 90 35 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEGEED
15 15 A M H 3< S- 0 0 135 91 41 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMLMML
16 16 A G << + 0 0 54 92 39 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGG
17 17 A L + 0 0 85 92 61 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLgLI
18 18 A A S S- 0 0 23 87 53 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAVAAAAAAAaVS
19 19 A C - 0 0 6 93 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
20 20 A V S S+ 0 0 57 93 49 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVAVV
21 21 A V S S- 0 0 76 94 35 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVEIV
22 22 A C S S- 0 0 60 94 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
23 23 A R + 0 0 168 94 61 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRsRRRRRR
24 24 A Q - 0 0 91 94 52 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQqQQSEQQ
25 25 A M + 0 0 65 94 40 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMIMMF
26 26 A T + 0 0 111 94 78 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTMTTTTMMMMMTMMMMMMMMTTTTTTTTTTTTTTDTND
27 27 A V + 0 0 61 94 41 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
28 28 A A > - 0 0 56 91 72 AAAAAAAAAAAAAAAAAAAAAAIFIAAFTTITAAFTATAAAAATAAAAAAAATTTTTTSTTTSTSSTGTS
29 29 A S T 3 S- 0 0 129 92 69 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSFSSSSSSSSFSMMSSMSMMMMMPSSPS
30 30 A G T 3 S+ 0 0 36 93 43 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGVGGGGGGGGVGGGGGGGGGGGGGGGGK
31 31 A N < + 0 0 62 94 8 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
32 32 A Q - 0 0 77 94 46 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPQQQQQQQQQQQQQ
33 33 A L E -A 44 0A 37 94 13 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
34 34 A V E -A 43 0A 11 94 15 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
35 35 A E E -A 42 0A 98 94 28 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
36 36 A C - 0 0 0 94 3 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
37 37 A Q S S+ 0 0 83 94 46 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAQ
38 38 A E S S+ 0 0 111 93 20 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE.EEEEEEEEEEEEEEEEEEEEEEEEEEEEDEEEE
39 39 A C S S- 0 0 39 94 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
40 40 A H + 0 0 117 94 17 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
41 41 A N - 0 0 64 94 63 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNDNNNN
42 42 A L E -A 35 0A 39 94 46 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
43 43 A Y E -A 34 0A 28 94 6 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
44 44 A H E > -A 33 0A 4 94 2 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
45 45 A Q T 4 S+ 0 0 2 94 25 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQQQQRRRRRQRRRRRRRRQQQQQQQQQQQQQQQQQQ
46 46 A D T 4 S+ 0 0 97 94 51 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDEDEDEDDDEEDDE
47 47 A C T 4 S+ 0 0 44 94 4 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
48 48 A H S < S- 0 0 12 94 11 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHQHHH
49 49 A K S S+ 0 0 185 93 53 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKRKKKRKQRR
50 50 A P S S- 0 0 72 94 7 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
51 51 A Q - 0 0 177 94 70 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQGPPPP
52 52 A V - 0 0 10 94 24 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVIIVV
53 53 A T > - 0 0 73 93 53 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTSTSTL
54 54 A D H > S+ 0 0 77 93 28 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
55 55 A K H > S+ 0 0 151 93 69 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKQQSQ
56 56 A E H 4 S+ 0 0 76 93 46 EEEEEEEEEEEEEEEEEEEEEEEDEEEDEEEEEEDDEDEEEEEEEEEEEEEEEDEEEDDDEEDDEEDEDD
57 57 A V H < S+ 0 0 44 94 46 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVAVVVVAAAAAVAAAAAAAAVVVVMVVVVVVVVAVVVV
58 58 A N H < S+ 0 0 109 94 44 NNNNNNNNNNNNNNNNNNNNNNNNNNTNNNNNNNNNTNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNNNT
59 59 A D >< - 0 0 69 94 1 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
60 60 A P T 3 S+ 0 0 118 93 25 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
61 61 A R T 3 S+ 0 0 243 93 21 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
62 62 A L < - 0 0 60 93 54 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLCKF
63 63 A V - 0 0 79 94 25 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVIVV
64 64 A W - 0 0 23 94 7 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
65 65 A Y - 0 0 89 94 33 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
66 66 A C >> - 0 0 0 94 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
67 67 A A H 3>>S+ 0 0 37 94 61 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAQY
68 68 A R H 3>5S+ 0 0 169 94 62 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRKRRR
69 69 A C H <>5S+ 0 0 8 94 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
70 70 A T H X5S+ 0 0 53 93 47 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAKTA
71 71 A R H <5S+ 0 0 156 94 56 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRKKRRK
72 72 A Q H < S- 0 0 57 92 43 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMLQMM
77 77 A A T 3 - 0 0 47 92 55 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAVSTANV
78 78 A Q T 3 S+ 0 0 205 92 73 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQVQQQRHTKKR
79 79 A K < - 0 0 156 91 52 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKLKKKKKKNIF
80 80 A N - 0 0 141 91 76 TTTTTTTTTTTTTTTTTTTTTTTNTTTNTTTTTTNTTTTTTTTTTTTTTTTTTTPPTTPTKPPPKLTNQH
81 81 A Q + 0 0 150 90 62 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPPQQPQAPPPAQQTAK
82 82 A K - 0 0 177 89 55 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKQQKKQKQQQQQKKVLR
83 83 A S S S+ 0 0 98 89 64 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPTKKPPKPKKKKKVSKPT
84 84 A G - 0 0 56 86 65 PPPPPPPAAPPPPPPPPPPPPPPSPPPSPPPPAPSPPPPPPPPPPPPPPPPPPTPPSPPPPPPPPVGTP
85 85 A P - 0 0 131 86 78 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQQSQPSSSPAKPL
86 86 A S + 0 0 128 85 50 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKPPKKPKQPPPQKMTK
87 87 A S 0 0 116 81 59 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPVAAPPAAKAAAKAS A
88 88 A G 0 0 123 80 48 AAAAAAAAAAAAAAAAAAAAAAASAAASAAAAAAAAAAAAAAAAAAAAAAAAASSSAASSPSSSPSP S
## ALIGNMENTS 71 - 93
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....8....:....9....:....0....:....1....:....2....:....3....:....4
1 1 A G 0 0 134 8 44 SSSSS S D
2 2 A S - 0 0 132 12 70 PPPPP EG G
3 3 A S + 0 0 125 15 72 TDDTM DD S N
4 4 A G - 0 0 81 22 55 TSSTT ES DE D D D
5 5 A S - 0 0 125 22 66 SSSSS SG SD E D S
6 6 A S + 0 0 125 80 50 SSSST TD DP T S D
7 7 A G - 0 0 76 84 55 DDDDSSDE S SG N D K
8 8 A A - 0 0 89 86 47 GGGGPDVFA T EI A S D
9 9 A D - 0 0 131 87 37 EEEEDSGNDE V SG D D L
10 10 A D + 0 0 130 87 8 DDDDDDDDDD H ED D D E
11 11 A F >> - 0 0 150 87 20 LFFLFLFFLL M IL F A L
12 12 A A H 3> S+ 0 0 30 87 40 ATTAEGAAAA D EE A K D
13 13 A M H >4 S+ 0 0 123 88 39 VVVVLLLIQI L KMVM A L
14 14 A E H <4 S+ 0 0 116 90 35 DDDDEEEGED T ANDEET FE
15 15 A M H 3< S- 0 0 135 91 41 MMMMMMMLIL WL ELGMQE KQ
16 16 A G << + 0 0 54 92 39 GGGGEDGDMG GKDADTGAK DA
17 17 A L + 0 0 85 92 61 QQQQggLIdV SFLYnLLLP dL
18 18 A A S S- 0 0 23 87 53 VVVVssAAhS S.MSt.A.. s.
19 19 A C - 0 0 6 93 0 CCCCCCCCCCCC.CCCCCCCCCC
20 20 A V S S+ 0 0 57 93 49 VVVVAVIVVSNS.ICVKVKKKVR
21 21 A V S S- 0 0 76 94 35 MMMMIVVVIVVVIVTIIVNKTVL
22 22 A C S S- 0 0 60 94 0 CCCCCCCCCCCCCCCCCCCCCCC
23 23 A R + 0 0 168 94 61 NNNNNKKKTDSKKNKKnrTGDNS
24 24 A Q - 0 0 91 94 52 QQQQDSQSGHDKGGESkqREGKR
25 25 A M + 0 0 65 94 40 LQQLMMLFLSRAMMSLLVMKVML
26 26 A T + 0 0 111 94 78 DDDDTDDDDEQNSDYNGEYTSDA
27 27 A V + 0 0 61 94 41 VVVVVVFVVnYSVVVQAGSALVF
28 28 A A > - 0 0 56 91 72 TTTTGKSKTmENGGLE..PS.GT
29 29 A S T 3 S- 0 0 129 92 69 AAAASAPTSTEPPAMN..AASVK
30 30 A G T 3 S+ 0 0 36 93 43 KKKKGNGGGGDGRRGG.GGTGRA
31 31 A N < + 0 0 62 94 8 NNNNNNNNNNNNNNNNLGNNNNN
32 32 A Q - 0 0 77 94 46 QQQQQAQQQKCQRRSIISRSQRQ
33 33 A L E -A 44 0A 37 94 13 LLLLLMPLLLILLLLLLYMMVLM
34 34 A V E -A 43 0A 11 94 15 IIIIVVVVVVVVVLVMLVVLLLV
35 35 A E E -A 42 0A 98 94 28 EEEEEEEEEEQEEEEEEAFTMEF
36 36 A C - 0 0 0 94 3 CCCCCCCCCCCCCCCCCICCCCC
37 37 A Q S S+ 0 0 83 94 46 QQQQHQSQQHSESSLHQEDEKSD
38 38 A E S S+ 0 0 111 93 20 EEEEEEEEEEEEDDETEEGGGDG
39 39 A C S S- 0 0 39 94 0 CCCCCCCCCCCCCCCCCCCCCCC
40 40 A H + 0 0 117 94 17 HHHHHHHHHHHHHHHQQPNHRHN
41 41 A N - 0 0 64 94 63 CCCCNDNHGSLTMMSNEQDVDAD
42 42 A L E -A 35 0A 39 94 46 LLLLLLLLLHHRLLMLAQGSCLA
43 43 A Y E -A 34 0A 28 94 6 YYYYFYYYYYYYYYYYYLWYYYW
44 44 A H E > -A 33 0A 4 94 2 HHHHHHHHHHHHHHHHHQHHHHH
45 45 A Q T 4 S+ 0 0 2 94 25 QQQQQQQQQQQQQQQQPSQQMQQ
46 46 A D T 4 S+ 0 0 97 94 51 EEEEEEEEEKKSEENELCLKKEG
47 47 A C T 4 S+ 0 0 44 94 4 CCCCCCCCCCCCCCCCCHCCCCC
48 48 A H S < S- 0 0 12 94 11 HHHHHHHHHHHHHHHHHSHHSHH
49 49 A K S S+ 0 0 185 93 53 RRRRQRKKQEES.KNSQLDKIKE
50 50 A P S S- 0 0 72 94 7 PPPPPPPPPPPPKPPPPQPPPPP
51 51 A Q - 0 0 177 94 70 PPPPHPPPNRVPPIPMPEWEPPR
52 52 A V - 0 0 10 94 24 AAAAIVIVIVVVPVIVVLIIVVI
53 53 A T > - 0 0 73 93 53 TTTTS.TTSSCAITISIDQTSSD
54 54 A D H > S+ 0 0 77 93 28 DDDDDTDEDDTDSNDNDSDTV.D
55 55 A K H > S+ 0 0 151 93 69 YYYYQERQAEKKEQIDIKDQE.S
56 56 A E H 4 S+ 0 0 76 93 46 DDDDYNDDEDDDNDNDDLVQE.F
57 57 A V H < S+ 0 0 44 94 46 VVVVVVVVVAMVISLAVYVSAEV
58 58 A N H < S+ 0 0 109 94 44 NNNNNNSHNNNSNFNDYDGTSES
59 59 A D >< - 0 0 69 94 1 DDDDDDDDDDDDDDDDDEDDDDD
60 60 A P T 3 S+ 0 0 118 93 25 PPPPPPPPPLPLP.PPPNQPPVA
61 61 A R T 3 S+ 0 0 243 93 21 RRRRRRRRRRRRR.RRRLARKVK
62 62 A L < - 0 0 60 93 54 LLLLCFNFSLLGL.ILFRRFFSK
63 63 A V - 0 0 79 94 25 VVVVIVVVVVIVVSVIVLGIVSQ
64 64 A W - 0 0 23 94 7 WWWWWWWWFWWWWWWWWMWFYWW
65 65 A Y - 0 0 89 94 33 YYYYNYYYFYYYYVYHRYFLHVH
66 66 A C >> - 0 0 0 94 0 CCCCCCCCCCCCCCCCCCCCCCC
67 67 A A H 3>>S+ 0 0 37 94 61 AAAAASAYSTSVSQFSKCSSKSS
68 68 A R H 3>5S+ 0 0 169 94 62 HRRHHKKKDLKSINNQRKAETNA
69 69 A C H <>5S+ 0 0 8 94 0 CCCCCCCCCCCCCCCCCCCCCCC
70 70 A T H X5S+ 0 0 53 93 47 TTTTKSTTSITSTKRSA.TGLKT
71 71 A R H <5S+ 0 0 156 94 56 KKKKRKKKKKKEKDQKEKTSVSA
72 72 A Q H < S- 0 0 57 92 43 MMMMQMAMT EMKMKMIVQ MKR
77 77 A A T 3 - 0 0 47 92 55 ATTAAASVA MTVKTSSAQ SAE
78 78 A Q T 3 S+ 0 0 205 92 73 IIIIKAKNS VTQLEPTQQ SKA
79 79 A K < - 0 0 156 91 52 KKKKHKKKR ARSA SKKQ ATA
80 80 A N - 0 0 141 91 76 PPPPNPSPP HQKT IVTQ SVQ
81 81 A Q + 0 0 150 90 62 PPPP QASK QIIT KKQQ REQ
82 82 A K - 0 0 177 89 55 KKKK KRKS FSKT T KQ SKA
83 83 A S S S+ 0 0 98 89 64 PPPP PANS VTSA G PQ REK
84 84 A G - 0 0 56 86 65 APPA N S GEIV N PQ SHR
85 85 A P - 0 0 131 86 78 SSSS N S KNHS S QP PNI
86 86 A S + 0 0 128 85 50 KKKK K R SK S T KQ SSK
87 87 A S 0 0 116 81 59 VAAV S E S P S P PK
88 88 A G 0 0 123 80 48 APPA P S A S G AS
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 13 0 0 75 0 0 0 0 0 0 0 0 13 8 0 0 0.736 24 0.56
2 2 A 0 0 0 0 0 0 0 17 0 42 17 0 0 0 0 0 0 8 17 0 12 0 0 1.468 48 0.30
3 3 A 0 0 0 7 0 0 0 0 0 0 33 13 0 0 0 7 0 0 7 33 15 0 0 1.543 51 0.28
4 4 A 0 0 0 0 0 0 0 14 0 5 14 14 0 0 0 0 0 9 0 45 22 0 0 1.532 51 0.44
5 5 A 0 0 0 5 5 0 0 9 0 0 41 0 0 0 0 0 0 32 0 9 22 0 0 1.447 48 0.34
6 6 A 0 0 0 1 0 0 0 0 0 1 9 84 0 0 0 0 0 1 0 4 80 0 0 0.649 21 0.49
7 7 A 0 0 0 0 0 0 0 2 0 0 73 0 0 0 0 1 0 1 13 10 84 0 0 0.917 30 0.45
8 8 A 1 0 1 0 1 0 0 5 85 1 1 1 0 0 0 0 0 1 0 2 86 0 0 0.732 24 0.53
9 9 A 1 1 0 0 0 0 0 2 0 0 2 0 0 0 0 0 0 8 1 84 87 0 0 0.677 22 0.63
10 10 A 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 3 0 95 87 0 0 0.212 7 0.91
11 11 A 0 8 1 1 89 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 87 0 0 0.465 15 0.79
12 12 A 1 0 0 0 0 0 0 1 87 0 0 2 0 0 0 1 0 5 0 2 87 0 0 0.587 19 0.60
13 13 A 6 7 2 80 1 0 0 0 1 0 0 0 0 0 0 1 1 1 0 0 88 0 0 0.868 28 0.60
14 14 A 0 0 0 0 1 0 0 2 1 0 0 2 0 0 0 0 0 84 1 8 90 0 0 0.661 22 0.64
15 15 A 0 7 1 85 0 1 0 1 0 0 0 0 0 0 0 1 2 2 0 0 91 0 0 0.687 22 0.58
16 16 A 0 0 0 1 0 0 0 85 3 0 0 1 0 0 0 2 0 2 0 5 92 0 0 0.675 22 0.61
17 17 A 1 82 2 0 1 0 1 3 0 1 1 0 0 0 0 0 4 0 1 2 92 5 6 0.876 29 0.39
18 18 A 7 0 0 1 0 0 0 0 82 0 8 1 0 1 0 0 0 0 0 0 87 0 0 0.707 23 0.46
19 19 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 93 0 0 0.000 0 1.00
20 20 A 86 0 2 0 0 0 0 0 2 0 2 0 1 0 1 4 0 0 1 0 93 0 0 0.659 21 0.51
21 21 A 83 1 6 4 0 0 0 0 0 0 0 2 0 0 0 1 0 1 1 0 94 0 0 0.740 24 0.64
22 22 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 94 0 0 0.000 0 1.00
23 23 A 0 0 0 0 0 0 0 1 0 0 3 2 0 0 76 7 0 0 9 2 94 0 3 0.937 31 0.38
24 24 A 0 0 0 0 0 0 0 4 0 0 4 0 0 1 2 3 80 3 0 2 94 0 0 0.881 29 0.47
25 25 A 2 7 1 80 2 0 0 0 1 0 2 0 0 0 1 1 2 0 0 0 94 0 0 0.895 29 0.60
26 26 A 0 0 0 15 0 0 2 1 1 0 2 60 0 0 0 0 1 2 3 13 94 0 0 1.356 45 0.22
27 27 A 88 1 0 0 2 0 1 1 2 0 2 0 0 0 0 0 1 0 1 0 94 3 1 0.597 19 0.58
28 28 A 0 1 3 1 3 0 0 5 45 1 8 26 0 0 0 2 0 2 1 0 91 0 0 1.659 55 0.27
29 29 A 1 0 0 10 2 0 0 0 9 5 67 2 0 0 0 1 0 1 1 0 92 0 0 1.227 40 0.30
30 30 A 2 0 0 0 0 0 0 85 1 0 0 1 0 0 3 5 0 0 1 1 93 0 0 0.684 22 0.57
31 31 A 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 98 0 94 0 0 0.118 3 0.91
32 32 A 0 0 2 0 0 0 0 0 1 1 3 0 1 0 4 1 86 0 0 0 94 0 0 0.648 21 0.53
33 33 A 1 91 1 4 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 94 0 0 0.409 13 0.86
34 34 A 89 5 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 94 0 0 0.439 14 0.84
35 35 A 0 0 0 1 2 0 0 0 1 0 0 1 0 0 0 0 1 94 0 0 94 0 0 0.337 11 0.71
36 36 A 0 0 1 0 0 0 0 0 0 0 0 0 99 0 0 0 0 0 0 0 94 0 0 0.059 1 0.96
37 37 A 0 1 0 0 0 0 0 0 1 0 5 0 0 3 0 1 83 3 0 2 94 1 0 0.758 25 0.54
38 38 A 0 0 0 0 0 0 0 4 0 0 0 1 0 0 0 0 0 90 0 4 93 0 0 0.411 13 0.79
39 39 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 94 0 0 0.000 0 1.00
40 40 A 0 0 0 0 0 0 0 0 0 1 0 0 0 94 1 0 2 0 2 0 94 0 0 0.322 10 0.82
41 41 A 1 1 0 2 0 0 0 1 1 0 2 1 4 1 0 0 1 1 78 5 94 0 0 1.037 34 0.36
42 42 A 0 89 0 1 0 0 0 1 2 0 1 0 1 2 1 0 1 0 0 0 94 0 0 0.554 18 0.54
43 43 A 0 1 0 0 1 2 96 0 0 0 0 0 0 0 0 0 0 0 0 0 94 0 0 0.220 7 0.94
44 44 A 0 0 0 0 0 0 0 0 0 0 0 0 0 99 0 0 1 0 0 0 94 0 0 0.059 1 0.98
45 45 A 0 0 0 1 0 0 0 0 0 1 1 0 0 0 15 0 82 0 0 0 94 0 0 0.592 19 0.74
46 46 A 0 2 0 0 0 0 0 1 0 0 1 0 1 0 0 4 0 20 1 69 94 0 0 0.988 32 0.49
47 47 A 0 0 0 0 0 0 0 0 0 0 0 0 99 1 0 0 0 0 0 0 94 0 0 0.059 1 0.95
48 48 A 0 0 0 0 0 0 0 0 0 0 2 0 0 97 0 0 1 0 0 0 94 1 0 0.162 5 0.88
49 49 A 0 1 1 0 0 0 0 0 0 0 2 0 0 0 11 75 4 3 1 1 93 0 0 0.977 32 0.47
50 50 A 0 0 0 0 0 0 0 0 0 98 0 0 0 0 0 1 1 0 0 0 94 0 0 0.118 3 0.93
51 51 A 1 0 1 1 0 1 0 1 0 18 0 0 0 1 2 0 70 2 1 0 94 0 0 1.060 35 0.29
52 52 A 84 1 10 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 94 1 0 0.602 20 0.75
53 53 A 0 1 3 0 0 0 0 0 1 0 9 82 1 0 0 0 1 0 0 2 93 1 0 0.764 25 0.47
54 54 A 1 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 1 2 90 93 0 0 0.465 15 0.71
55 55 A 0 0 2 0 0 0 4 0 1 0 2 0 0 0 1 75 8 4 0 2 93 0 0 1.024 34 0.30
56 56 A 1 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 1 63 3 28 93 0 0 0.999 33 0.54
57 57 A 72 1 1 2 0 0 1 0 19 0 2 0 0 0 0 0 0 1 0 0 94 0 0 0.908 30 0.53
58 58 A 0 0 0 0 1 0 1 1 0 0 4 5 0 1 0 0 0 1 83 2 94 0 0 0.769 25 0.56
59 59 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 99 94 1 0 0.059 1 0.99
60 60 A 1 2 0 0 0 0 0 0 1 94 0 0 0 0 0 0 1 0 1 0 93 0 0 0.340 11 0.75
61 61 A 1 1 0 0 0 0 0 0 1 0 0 0 0 0 95 2 0 0 0 0 93 0 0 0.281 9 0.78
62 62 A 0 82 1 0 6 0 0 1 0 0 2 0 2 0 2 2 0 0 1 0 93 0 0 0.818 27 0.46
63 63 A 89 1 5 0 0 0 0 1 0 0 2 0 0 0 0 0 1 0 0 0 94 0 0 0.483 16 0.74
64 64 A 0 0 0 1 2 96 1 0 0 0 0 0 0 0 0 0 0 0 0 0 94 0 0 0.220 7 0.93
65 65 A 2 1 0 0 2 0 89 0 0 0 0 0 0 3 1 0 0 0 1 0 94 0 0 0.519 17 0.67
66 66 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 94 0 0 0.000 0 1.00
67 67 A 1 0 0 0 1 0 2 1 78 0 10 2 1 0 0 2 2 0 0 0 94 0 0 0.942 31 0.39
68 68 A 0 1 1 0 0 0 0 0 2 0 1 1 0 3 78 6 1 1 3 1 94 0 0 1.012 33 0.37
69 69 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 94 1 0 0.000 0 1.00
70 70 A 0 1 1 0 0 0 0 1 3 0 4 84 0 0 1 4 0 0 0 0 93 0 0 0.724 24 0.53
71 71 A 1 0 0 0 0 0 0 0 1 0 2 1 0 0 73 17 1 2 0 1 94 0 0 0.934 31 0.43
72 72 A 0 0 1 0 0 0 0 0 1 0 6 4 0 0 2 6 72 0 6 0 94 0 0 1.074 35 0.27
73 73 A 0 3 4 84 0 0 0 0 0 0 3 1 0 0 1 1 1 0 0 1 93 0 0 0.748 24 0.53
74 74 A 0 0 0 0 0 0 0 1 1 0 2 1 0 1 3 87 1 1 0 1 93 0 0 0.655 21 0.63
75 75 A 1 0 0 0 0 0 0 0 1 0 0 0 0 0 72 22 2 2 0 0 92 0 0 0.835 27 0.53
76 76 A 1 1 1 86 0 0 0 0 1 0 0 1 0 0 1 3 3 1 0 0 92 0 0 0.698 23 0.56
77 77 A 4 0 0 1 0 0 0 0 78 0 5 5 1 0 0 1 1 1 1 0 92 0 0 0.940 31 0.45
78 78 A 2 1 4 0 0 0 0 0 2 1 2 3 0 1 2 5 73 1 1 0 92 0 0 1.216 40 0.27
79 79 A 0 1 1 0 1 0 0 0 4 0 2 1 0 1 2 84 1 0 1 0 91 0 0 0.803 26 0.47
80 80 A 2 1 1 0 0 0 0 0 0 14 2 63 0 2 0 3 4 0 7 0 91 0 0 1.351 45 0.23
81 81 A 0 0 2 0 0 0 0 0 4 11 1 2 0 0 1 4 72 1 0 0 90 0 0 1.075 35 0.38
82 82 A 1 1 0 0 1 0 0 0 1 0 3 2 0 0 2 78 10 0 0 0 89 0 0 0.916 30 0.45
83 83 A 2 0 0 0 0 0 0 1 2 71 4 3 0 0 1 11 1 1 1 0 89 0 0 1.167 38 0.35
84 84 A 2 0 1 0 0 0 0 3 6 71 7 2 0 1 1 0 1 1 2 0 86 0 0 1.233 41 0.34
85 85 A 0 1 1 0 0 0 0 0 1 8 15 0 0 1 0 2 66 0 3 0 86 0 0 1.174 39 0.22
86 86 A 0 0 0 1 0 0 0 0 0 7 6 2 0 0 1 79 4 0 0 0 85 0 0 0.852 28 0.50
87 87 A 4 0 0 0 0 0 0 0 14 72 6 0 0 0 0 4 0 1 0 0 81 0 0 0.981 32 0.40
88 88 A 0 0 0 0 0 0 0 3 71 8 19 0 0 0 0 0 0 0 0 0 80 0 0 0.842 28 0.52
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
64 19 167 2 sLRq
68 17 153 1 gLa
75 18 158 1 gLs
76 12 203 1 gVs
79 11 75 1 dLh
80 20 20 1 nKm
86 15 127 1 nLt
87 11 142 2 nGAk
88 21 167 2 rKNq
92 18 91 1 dLs
//