Complet list of 1vrf hssp file
Complete list of 1vrf.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1VRF
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-11
HEADER HEME PROTEIN 25-MAR-99 1VRF
COMPND MOL_ID: 1; MOLECULE: PROTEIN (GLOBIN, MONOMERIC COMPONENT M-IV); CHAIN
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: GLYCERA DIBRANCHIATA; ORGANISM_TAXID:
AUTHOR B.F.VOLKMAN,S.L.ALAM,J.D.SATTERLEE,J.L.MARKLEY
DBREF 1VRF A 1 147 UNP P15447 GLB4_GLYDI 1 147
SEQLENGTH 147
NCHAIN 1 chain(s) in 1VRF data set
NALIGN 12
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : GLB4_GLYDI 1VRE 0.98 0.99 1 147 2 148 147 0 0 148 P15447 Globin, monomeric component M-IV OS=Glycera dibranchiata PE=1 SV=2
2 : GLB1_GLYDI 2HBG 0.93 0.98 1 147 1 147 147 0 0 147 P02216 Globin, major monomeric component OS=Glycera dibranchiata PE=1 SV=2
3 : GLBP3_GLYDI 0.37 0.65 2 147 3 147 151 3 11 147 P21660 Globin, polymeric component P3 OS=Glycera dibranchiata PE=1 SV=1
4 : E7BQB7_9ANNE 0.36 0.57 2 130 2 122 129 3 8 122 E7BQB7 Hemoglobin (Fragment) OS=Branchiplicatus cupreus GN=Hb PE=2 SV=1
5 : GLBP1_GLYDI 0.36 0.64 2 147 3 147 151 3 11 147 P23216 Globin, major polymeric component P1 OS=Glycera dibranchiata PE=1 SV=1
6 : GLBP2_GLYDI 0.35 0.67 2 147 3 147 151 3 11 147 P21659 Globin, polymeric component P2 OS=Glycera dibranchiata PE=2 SV=1
7 : E7BQB4_9ANNE 0.34 0.56 2 146 2 138 145 3 8 138 E7BQB4 Hemoglobin OS=Branchinotogluma trifurcus GN=Hb PE=2 SV=1
8 : C7FFW3_BRAST 0.32 0.57 2 145 2 137 144 3 8 138 C7FFW3 Extracellular single-domain globin (Fragment) OS=Branchipolynoe symmytilida PE=3 SV=1
9 : C7FFW4_BRASE 0.32 0.56 2 145 2 137 144 3 8 138 C7FFW4 Extracellular single-domain globin (Fragment) OS=Branchipolynoe seepensis PE=3 SV=1
10 : E7BQB6_9ANNE 0.32 0.54 2 130 2 122 129 3 8 122 E7BQB6 Hemoglobin (Fragment) OS=Branchiplicatus cupreus GN=Hb PE=2 SV=1
11 : E7BQB8_9ANNE 0.31 0.54 2 130 2 122 129 3 8 122 E7BQB8 Hemoglobin (Fragment) OS=Lepidonotopodium williamsae GN=Hb PE=2 SV=1
12 : E7BQB5_9ANNE 0.30 0.56 2 145 2 137 144 3 8 138 E7BQB5 Hemoglobin OS=Branchinotogluma segonzaci GN=Hb PE=2 SV=1
## ALIGNMENTS 1 - 12
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A G 0 0 109 3 0 GG
2 2 A L - 0 0 37 13 35 LLLVLLVVVVVV
3 3 A S > - 0 0 51 13 45 SSTSTTSSSSST
4 4 A A H > S+ 0 0 84 13 0 AAAAAAAAAAAA
5 5 A A H > S+ 0 0 61 13 49 AADADDAAAASA
6 6 A Q H > S+ 0 0 33 13 0 QQQQQQQQQQQQ
7 7 A R H X S+ 0 0 116 13 81 RRVMVVKKKIKK
8 8 A Q H X S+ 0 0 89 13 43 QQAAAAAAAAAA
9 9 A V H X S+ 0 0 29 13 43 VVAAAAAAAAAA
10 10 A V H >X S+ 0 0 0 13 31 VILILLIIIIII
11 11 A A H 3X S+ 0 0 18 13 60 AAKTKKRKKKKK
12 12 A S H 3< S+ 0 0 65 13 55 SAASAADSSSSD
13 13 A T H S+ 0 0 20 13 0 WWWWWWWWWWWW
15 15 A K H <5S+ 0 0 145 13 77 KKPSPPASSSSA
16 16 A D H 45S+ 0 0 60 13 50 DDEGEEGGGGGG
17 17 A I H <5S+ 0 0 2 13 14 IIVVVVIVVVVV
18 18 A A T >X>S+ 0 0 3 12 74 AASDSSD.DDDD
19 19 A G T 34> S+ 0 0 30 7 45 AAA.AG.Q....
25 25 A G H 34 S+ 0 0 31 7 73 GGQ.QQ.A....
26 26 A V H <> S+ 0 0 2 7 63 VVL.LL.A....
27 27 A G H X>S+ 0 0 0 7 0 GGG.GG.G....
28 28 A K H <5S+ 0 0 93 13 92 KKLNLLNVVNIN
29 29 A E H >5S+ 0 0 43 13 62 EDEAEEAAAAAA
30 30 A C H X5S+ 0 0 0 13 79 CCMFMLFFFFFF
31 31 A F H X5S+ 0 0 12 13 14 FLFYFFYYYYYY
32 32 A T H >X + 0 0 45 13 84 HHNANNAAAATA
39 39 A H H 3> S+ 0 0 145 13 29 HPPPPPPPPPPP
40 40 A D H 34 S+ 0 0 78 13 32 DQQDQQDDDDDD
41 41 A M H X> S+ 0 0 9 13 78 IMMAMMAAAAAA
42 42 A A H 3X>S+ 0 0 9 13 99 AAMYMMYYYYYY
43 43 A A H 3<5S+ 0 0 81 13 78 AAFAFFAAAAPA
44 44 A V H <45S+ 0 0 28 13 10 VVVVIIVVVVVV
45 45 A F H <5S- 0 0 51 13 0 FFFFFFFFFFFF
46 46 A G T <5S+ 0 0 55 13 55 GGGNGGNNNNNN
47 47 A F < - 0 0 30 13 39 FFYLYYLLLLLL
48 48 A S S S- 0 0 113 13 45 SSSGSSGGGGGG
49 49 A G S > S- 0 0 14 13 22 GGgGggGSSGGS
50 50 A A T 3 S+ 0 0 42 6 87 AAk.kk......
51 51 A S T 3 S+ 0 0 113 13 76 SSHDHHDDDDDD
52 52 A D X - 0 0 62 13 74 DDNASNAAAAPS
53 53 A P T 3> S+ 0 0 109 13 62 PPSGSAGGGGGG
54 54 A G H >> S+ 0 0 20 13 53 GGKKKKKKKKKK
55 55 A V H X> S+ 0 0 0 13 58 VVLTLLIIITTI
56 56 A A H 3> S+ 0 0 29 13 47 AAQAQQAAAAAA
57 57 A D H X S+ 0 0 2 13 44 AAAAAAVVVAAI
70 70 A V H 3< S+ 0 0 5 13 0 VVVVVVVVVVVV
71 71 A S T 3< S+ 0 0 85 13 77 SSSKAAKKKKKK
72 72 A H T X4 + 0 0 50 13 74 HHEDEEGGGGNG
73 73 A L T 3< S+ 0 0 0 13 11 LLLLMMLLLLIL
74 74 A G T 3 S+ 0 0 43 13 26 GGDDDDDDDDDD
75 75 A D <> + 0 0 82 13 20 DDDDNNDDDDDD
76 76 A E T 4 + 0 0 126 13 94 EEGMAAMMMMMM
77 77 A G T 4 S- 0 0 70 13 67 GGSGKKGGGSID
78 78 A K T >> S+ 0 0 107 13 84 KKKAQQGGGAAG
79 79 A M H 3X S+ 0 0 3 13 52 MMFVMMVVVVVV
80 80 A V H 3> S+ 0 0 23 13 92 VVEKAAKKKKKK
81 81 A A H <> S+ 0 0 58 13 30 AAAAGGAAASGA
82 82 A E H X S+ 0 0 75 13 79 EQTSTTSSSSSS
83 83 A M H X S+ 0 0 4 13 42 MMLVLLIIIIII
84 84 A K H X S+ 0 0 101 13 71 KKHDHHDDDDDD
85 85 A A H X S+ 0 0 43 13 50 AAKAAANTTAAT
86 86 A V H >X S+ 0 0 25 13 23 VVLLLLLLLLLL
87 87 A G H 3X S+ 0 0 0 13 7 GGGGGGGGGGAG
88 88 A V H 3< S+ 0 0 56 13 84 VVQQVVQSSQQG
89 89 A R H X< S+ 0 0 172 13 19 RRERRRRRRRRR
90 90 A H H >< S+ 0 0 38 13 0 HHHHHHHHHHHH
91 91 A K T 3< S+ 0 0 69 13 65 KKKTKKTTTTTT
92 92 A G T < S+ 0 0 52 13 14 GGGGGGGGGAGS
93 93 A Y S < S- 0 0 97 13 3 YYFYFFYYYYYY
94 94 A G S S+ 0 0 76 13 0 GGGGGGGGGGGG
95 95 A N S S- 0 0 34 10 79 YN.A..AAAAAA
96 96 A K S S+ 0 0 142 10 15 KK.K..KKKHKK
97 97 A H + 0 0 138 13 75 HHDKDDKKKKKK
98 98 A I - 0 0 10 8 56 III.IIAA....
99 99 A K >> - 0 0 90 7 51 KKK.RRH.....
100 100 A A H 3> S+ 0 0 20 6 19 AAG.AA......
101 101 A E H 34 S+ 0 0 125 11 61 EQEEED..AGAV
102 102 A Y H <> S+ 0 0 67 12 67 YYYHFF.HHHHH
103 103 A F H X S+ 0 0 35 13 0 FFFFFFFFFFFF
104 104 A E H X S+ 0 0 127 13 69 EEPGPPGGGGGG
105 105 A P H > S+ 0 0 40 13 42 PPAPAAPPPSPP
106 106 A L H < S+ 0 0 15 13 80 LLLALLAAAAAA
107 107 A G H X S+ 0 0 2 13 0 GGGGGGGGGGGG
108 108 A A H >X S+ 0 0 62 13 81 AADPMMPPPPPP
109 109 A S H 3X S+ 0 0 39 13 39 SSACCCCCCCCC
110 110 A L H >> S+ 0 0 0 13 0 LLLLLLLLLLLL
111 111 A L H X S+ 0 0 1 12 10 MMML.MLLLLLL
115 115 A E H 3< S+ 0 0 96 12 67 EENA.EAAAAAA
116 116 A H H <4 S+ 0 0 113 12 58 HHSE.EEEEEEE
117 117 A R H << S+ 0 0 144 13 95 RRKVAKVVAVVV
118 118 A I S X S+ 0 0 10 13 78 IIVCMVCCCCCC
119 119 A G T 4 S+ 0 0 30 11 19 GG.GE.GGGGGG
120 120 A G T 4 S+ 0 0 86 11 19 GG.GE.GGGGGG
121 121 A K T 4 S+ 0 0 135 11 0 KK.KK.KKKKKK
122 122 A M < + 0 0 16 11 61 MM.FV.FFFFFF
123 123 A N >> - 0 0 82 13 70 TNHTPPTTTTTT
124 124 A A H 3> S+ 0 0 70 13 63 AAGPGGPPPPPP
125 125 A A H 3> S+ 0 0 39 13 57 AALALLAAAAAA
126 126 A A H <> S+ 0 0 0 13 46 AADANNAAAAAA
127 127 A K H X S+ 0 0 106 13 25 KKRKRRKKKKKK
128 128 A D H X S+ 0 0 69 13 47 DDTDTTDDDDDD
129 129 A A H X S+ 0 0 0 13 77 AALALLGGGAAG
130 130 A W H X S+ 0 0 0 13 0 WWWWWWWWWWWW
131 131 A A H < S+ 0 0 49 10 51 AAA AATTT T
132 132 A A H X S+ 0 0 30 10 0 AAA AAAAA A
133 133 A A H >X S+ 0 0 0 10 83 AAG AALLL L
134 134 A Y H 3X S+ 0 0 7 10 0 YYY YYYYY Y
135 135 A A H 3> S+ 0 0 54 10 90 AAR RRGGG G
136 136 A D H < S+ 0 0 25 10 30 GGD DDDDD D
140 140 A A H >< S+ 0 0 10 10 37 AAA AAGGG G
141 141 A L T 3< S+ 0 0 11 10 52 LLL CLIII I
142 142 A I T < S+ 0 0 58 10 63 III IVCCC C
143 143 A S S < S+ 0 0 77 10 45 SSA AASSS A
144 144 A G S S+ 0 0 9 10 79 GGG GGHHH H
145 145 A L + 0 0 4 10 0 LLL LLLLL L
146 146 A Q 0 0 79 7 28 QQE QEQ
147 147 A S 0 0 143 6 0 SSS SS
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0.000 0 1.00
2 2 A 54 46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0.690 23 0.65
3 3 A 0 0 0 0 0 0 0 0 0 0 69 31 0 0 0 0 0 0 0 0 13 0 0 0.617 20 0.55
4 4 A 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0.000 0 1.00
5 5 A 0 0 0 0 0 0 0 0 69 0 8 0 0 0 0 0 0 0 0 23 13 0 0 0.790 26 0.50
6 6 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 13 0 0 0.000 0 1.00
7 7 A 23 0 8 8 0 0 0 0 0 0 0 0 0 0 23 38 0 0 0 0 13 0 0 1.439 48 0.19
8 8 A 0 0 0 0 0 0 0 0 77 0 0 0 0 0 0 0 23 0 0 0 13 0 0 0.540 18 0.56
9 9 A 23 0 0 0 0 0 0 0 77 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0.540 18 0.56
10 10 A 15 23 62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0.925 30 0.68
11 11 A 0 0 0 0 0 0 0 0 23 0 0 8 0 0 8 62 0 0 0 0 13 0 0 1.032 34 0.40
12 12 A 0 0 0 0 0 0 0 0 31 0 54 0 0 0 0 0 0 0 0 15 13 0 0 0.984 32 0.44
13 13 A 0 0 0 0 0 0 0 0 0 0 77 23 0 0 0 0 0 0 0 0 13 0 0 0.540 18 0.60
14 14 A 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0.000 0 1.00
15 15 A 0 0 0 0 0 0 0 0 15 23 38 0 0 0 0 23 0 0 0 0 13 0 0 1.332 44 0.23
16 16 A 0 0 0 0 0 0 0 54 0 0 0 0 0 0 0 0 0 23 0 23 13 0 0 1.010 33 0.50
17 17 A 69 0 31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 1 0 0.617 20 0.86
18 18 A 0 0 0 0 0 0 0 0 25 0 25 0 0 0 0 0 0 0 0 50 12 0 0 1.040 34 0.26
19 19 A 0 50 0 0 0 0 0 25 25 0 0 0 0 0 0 0 0 0 0 0 12 0 0 1.040 34 0.03
20 20 A 0 0 0 0 0 0 0 25 8 0 17 0 0 0 0 0 50 0 0 0 12 0 0 1.199 40 0.21
21 21 A 8 0 0 0 0 0 0 0 42 0 0 0 0 0 0 0 0 0 0 50 12 0 0 0.918 30 0.34
22 22 A 0 0 0 0 0 0 0 23 46 0 0 0 0 0 0 0 0 0 23 8 13 0 0 1.231 41 0.37
23 23 A 0 8 0 0 0 0 0 92 0 0 0 0 0 0 0 0 0 0 0 0 13 6 0 0.271 9 0.83
24 24 A 0 0 0 0 0 0 0 14 71 0 0 0 0 0 0 0 14 0 0 0 7 0 0 0.796 26 0.54
25 25 A 0 0 0 0 0 0 0 43 14 0 0 0 0 0 0 0 43 0 0 0 7 0 0 1.004 33 0.26
26 26 A 43 43 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 7 0 0 1.004 33 0.37
27 27 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0.000 0 1.00
28 28 A 15 23 8 0 0 0 0 0 0 0 0 0 0 0 0 23 0 0 31 0 13 0 0 1.525 50 0.08
29 29 A 0 0 0 0 0 0 0 0 54 0 0 0 0 0 0 0 0 38 0 8 13 0 0 0.898 29 0.38
30 30 A 0 8 0 15 54 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 13 0 0 1.157 38 0.20
31 31 A 0 8 0 0 38 0 54 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0.898 29 0.85
32 32 A 0 0 8 0 0 0 0 0 15 0 8 38 0 23 0 0 0 0 8 0 13 0 0 1.586 52 0.18
33 33 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 38 54 0 0 0 13 0 0 0.898 29 0.42
34 34 A 0 54 0 0 23 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 1.010 33 0.60
35 35 A 0 23 0 0 23 0 0 0 0 0 0 0 0 0 0 23 31 0 0 0 13 0 0 1.378 45 -0.06
36 36 A 0 0 0 0 0 0 0 0 54 0 23 0 0 15 0 0 0 0 0 8 13 0 0 1.157 38 0.19
37 37 A 0 0 0 0 0 0 8 0 23 0 0 0 0 8 0 0 0 23 38 0 13 0 0 1.439 48 0.20
38 38 A 0 0 0 0 0 0 0 0 46 0 0 8 0 23 0 0 0 0 23 0 13 0 0 1.231 41 0.16
39 39 A 0 0 0 0 0 0 0 0 0 85 0 0 0 15 0 0 0 0 0 0 13 0 0 0.429 14 0.70
40 40 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31 0 0 69 13 0 0 0.617 20 0.67
41 41 A 0 0 8 38 0 0 0 0 54 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0.898 29 0.21
42 42 A 0 0 0 23 0 0 54 0 23 0 0 0 0 0 0 0 0 0 0 0 13 0 0 1.010 33 0.00
43 43 A 0 0 0 0 23 0 0 0 69 8 0 0 0 0 0 0 0 0 0 0 13 0 0 0.790 26 0.21
44 44 A 85 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0.429 14 0.90
45 45 A 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0.000 0 1.00
46 46 A 0 0 0 0 0 0 0 46 0 0 0 0 0 0 0 0 0 0 54 0 13 0 0 0.690 23 0.45
47 47 A 0 54 0 0 23 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 1.010 33 0.60
48 48 A 0 0 0 0 0 0 0 54 0 0 46 0 0 0 0 0 0 0 0 0 13 0 0 0.690 23 0.55
49 49 A 0 0 0 0 0 0 0 77 0 0 23 0 0 0 0 0 0 0 0 0 13 7 3 0.540 18 0.77
50 50 A 0 0 0 0 0 0 0 0 50 0 0 0 0 0 0 50 0 0 0 0 6 0 0 0.693 23 0.12
51 51 A 0 0 0 0 0 0 0 0 0 0 23 0 0 23 0 0 0 0 0 54 13 0 0 1.010 33 0.23
52 52 A 0 0 0 0 0 0 0 0 38 8 15 0 0 0 0 0 0 0 15 23 13 0 0 1.479 49 0.25
53 53 A 0 0 0 0 0 0 0 54 8 23 15 0 0 0 0 0 0 0 0 0 13 0 0 1.157 38 0.37
54 54 A 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 77 0 0 0 0 13 0 0 0.540 18 0.46
55 55 A 23 23 31 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 0 13 0 0 1.378 45 0.41
56 56 A 0 0 0 0 0 0 0 0 77 0 0 0 0 0 0 0 23 0 0 0 13 0 0 0.540 18 0.53
57 57 A 0 0 0 0 0 0 0 0 62 0 0 0 0 8 0 0 0 0 15 15 13 0 0 1.072 35 0.32
58 58 A 0 23 0 0 0 0 0 0 0 0 0 0 0 23 0 0 54 0 0 0 13 0 0 1.010 33 0.24
59 59 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0.000 0 1.00
60 60 A 0 54 0 0 0 0 0 0 23 0 0 0 0 0 0 23 0 0 0 0 13 0 0 1.010 33 -0.00
61 61 A 15 0 8 0 0 0 0 0 0 0 0 0 0 0 0 77 0 0 0 0 13 0 0 0.687 22 0.38
62 62 A 62 0 23 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 13 0 0 0.925 30 0.66
63 63 A 8 23 15 54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 1.157 38 0.64
64 64 A 0 0 0 0 0 0 0 0 23 0 0 46 0 8 0 0 0 0 8 15 13 0 0 1.378 45 0.22
65 65 A 0 0 0 0 54 0 0 0 0 0 0 0 0 0 0 0 46 0 0 0 13 0 0 0.690 23 -0.16
66 66 A 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0.000 0 1.00
67 67 A 0 0 0 0 0 0 0 46 0 0 0 0 0 0 0 0 0 0 0 54 13 0 0 0.690 23 0.60
68 68 A 23 0 0 0 0 0 0 54 0 0 0 0 0 0 0 15 8 0 0 0 13 0 0 1.157 38 0.12
69 69 A 23 0 8 0 0 0 0 0 69 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0.790 26 0.56
70 70 A 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0.000 0 1.00
71 71 A 0 0 0 0 0 0 0 0 15 0 31 0 0 0 0 54 0 0 0 0 13 0 0 0.984 32 0.23
72 72 A 0 0 0 0 0 0 0 38 0 0 0 0 0 23 0 0 0 23 8 8 13 0 0 1.439 48 0.26
73 73 A 0 77 8 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0.687 22 0.89
74 74 A 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 0 0 0 0 77 13 0 0 0.540 18 0.73
75 75 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 85 13 0 0 0.429 14 0.80
76 76 A 0 0 0 54 0 0 0 8 15 0 0 0 0 0 0 0 0 23 0 0 13 0 0 1.157 38 0.05
77 77 A 0 0 8 0 0 0 0 54 0 0 15 0 0 0 0 15 0 0 0 8 13 0 0 1.304 43 0.33
78 78 A 0 0 0 0 0 0 0 31 23 0 0 0 0 0 0 31 15 0 0 0 13 0 0 1.352 45 0.15
79 79 A 54 0 0 38 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0.898 29 0.47
80 80 A 23 0 0 0 0 0 0 0 15 0 0 0 0 0 0 54 0 8 0 0 13 0 0 1.157 38 0.07
81 81 A 0 0 0 0 0 0 0 23 69 0 8 0 0 0 0 0 0 0 0 0 13 0 0 0.790 26 0.70
82 82 A 0 0 0 0 0 0 0 0 0 0 54 23 0 0 0 0 8 15 0 0 13 0 0 1.157 38 0.21
83 83 A 8 23 46 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 1.231 41 0.57
84 84 A 0 0 0 0 0 0 0 0 0 0 0 0 0 23 0 23 0 0 0 54 13 0 0 1.010 33 0.29
85 85 A 0 0 0 0 0 0 0 0 62 0 0 23 0 0 0 8 0 0 8 0 13 0 0 1.032 34 0.50
86 86 A 23 77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0.540 18 0.77
87 87 A 0 0 0 0 0 0 0 92 8 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0.271 9 0.93
88 88 A 38 0 0 0 0 0 0 8 0 0 15 0 0 0 0 0 38 0 0 0 13 0 0 1.220 40 0.15
89 89 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 92 0 0 8 0 0 13 0 0 0.271 9 0.81
90 90 A 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 13 0 0 0.000 0 1.00
91 91 A 0 0 0 0 0 0 0 0 0 0 0 54 0 0 0 46 0 0 0 0 13 0 0 0.690 23 0.35
92 92 A 0 0 0 0 0 0 0 85 8 0 8 0 0 0 0 0 0 0 0 0 13 0 0 0.536 17 0.85
93 93 A 0 0 0 0 23 0 77 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0.540 18 0.96
94 94 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 13 3 0 0.000 0 1.00
95 95 A 0 0 0 0 0 0 10 0 70 0 0 0 0 0 0 0 0 0 20 0 10 0 0 0.802 26 0.20
96 96 A 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 90 0 0 0 0 10 0 0 0.325 10 0.84
97 97 A 0 0 0 0 0 0 0 0 0 0 0 0 0 23 0 54 0 0 0 23 13 5 0 1.010 33 0.24
98 98 A 0 0 75 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0.562 18 0.44
99 99 A 0 0 0 0 0 0 0 0 0 0 0 0 0 14 29 57 0 0 0 0 7 1 0 0.956 31 0.48
100 100 A 0 0 0 0 0 0 0 17 83 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0.451 15 0.80
101 101 A 9 0 0 0 0 0 0 9 18 0 0 0 0 0 0 0 9 45 0 9 11 0 0 1.540 51 0.38
102 102 A 0 0 0 0 17 0 33 0 0 0 0 0 0 50 0 0 0 0 0 0 12 0 0 1.011 33 0.33
103 103 A 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0.000 0 1.00
104 104 A 0 0 0 0 0 0 0 54 0 23 0 0 0 0 0 0 0 23 0 0 13 0 0 1.010 33 0.31
105 105 A 0 0 0 0 0 0 0 0 23 69 8 0 0 0 0 0 0 0 0 0 13 0 0 0.790 26 0.58
106 106 A 0 46 0 0 0 0 0 0 54 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0.690 23 0.19
107 107 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0.000 0 1.00
108 108 A 0 0 0 15 0 0 0 0 23 54 0 0 0 0 0 0 0 0 0 8 13 0 0 1.157 38 0.18
109 109 A 0 0 0 0 0 0 0 0 8 0 23 0 69 0 0 0 0 0 0 0 13 0 0 0.790 26 0.61
110 110 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0.000 0 1.00
111 111 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0.000 0 1.00
112 112 A 0 0 0 0 0 0 0 0 54 0 23 0 0 0 0 0 0 8 0 15 13 1 0 1.157 38 0.29
113 113 A 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0.000 0 1.00
114 114 A 0 58 0 42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0.679 22 0.90
115 115 A 0 0 0 0 0 0 0 0 58 0 0 0 0 0 0 0 0 33 8 0 12 0 0 0.888 29 0.33
116 116 A 0 0 0 0 0 0 0 0 0 0 8 0 0 25 0 0 0 67 0 0 12 0 0 0.824 27 0.42
117 117 A 46 0 0 0 0 0 0 0 15 0 0 0 0 0 23 15 0 0 0 0 13 0 0 1.271 42 0.05
118 118 A 15 0 23 8 0 0 0 0 0 0 0 0 54 0 0 0 0 0 0 0 13 2 0 1.157 38 0.21
119 119 A 0 0 0 0 0 0 0 91 0 0 0 0 0 0 0 0 0 9 0 0 11 0 0 0.305 10 0.81
120 120 A 0 0 0 0 0 0 0 91 0 0 0 0 0 0 0 0 0 9 0 0 11 0 0 0.305 10 0.81
121 121 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 11 0 0 0.000 0 1.00
122 122 A 9 0 0 27 64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0.860 28 0.39
123 123 A 0 0 0 0 0 0 0 0 0 15 0 62 0 8 0 0 0 0 15 0 13 0 0 1.072 35 0.30
124 124 A 0 0 0 0 0 0 0 23 23 54 0 0 0 0 0 0 0 0 0 0 13 0 0 1.010 33 0.37
125 125 A 0 23 0 0 0 0 0 0 77 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0.540 18 0.42
126 126 A 0 0 0 0 0 0 0 0 77 0 0 0 0 0 0 0 0 0 15 8 13 0 0 0.687 22 0.53
127 127 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 77 0 0 0 0 13 0 0 0.540 18 0.75
128 128 A 0 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 77 13 0 0 0.540 18 0.53
129 129 A 0 23 0 0 0 0 0 31 46 0 0 0 0 0 0 0 0 0 0 0 13 0 0 1.058 35 0.22
130 130 A 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0.000 0 1.00
131 131 A 0 0 0 0 0 0 0 0 60 0 0 40 0 0 0 0 0 0 0 0 10 0 0 0.673 22 0.48
132 132 A 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0.000 0 1.00
133 133 A 0 40 0 0 0 0 0 10 50 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0.943 31 0.16
134 134 A 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0.000 0 1.00
135 135 A 0 0 0 0 0 0 0 40 30 0 0 0 0 0 30 0 0 0 0 0 10 0 0 1.089 36 0.09
136 136 A 30 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 30 10 0 0 1.366 45 0.09
137 137 A 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0.000 0 1.00
138 138 A 0 0 0 0 0 0 0 0 20 0 80 0 0 0 0 0 0 0 0 0 10 0 0 0.500 16 0.73
139 139 A 0 0 0 0 0 0 0 30 0 0 0 0 0 0 0 0 0 0 0 70 10 0 0 0.611 20 0.70
140 140 A 0 0 0 0 0 0 0 40 60 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0.673 22 0.62
141 141 A 0 50 40 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 10 0 0 0.943 31 0.48
142 142 A 10 0 50 0 0 0 0 0 0 0 0 0 40 0 0 0 0 0 0 0 10 0 0 0.943 31 0.36
143 143 A 0 0 0 0 0 0 0 0 40 0 60 0 0 0 0 0 0 0 0 0 10 0 0 0.673 22 0.55
144 144 A 0 0 0 0 0 0 0 60 0 0 0 0 0 40 0 0 0 0 0 0 10 0 0 0.673 22 0.20
145 145 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0.000 0 1.00
146 146 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 71 29 0 0 7 0 0 0.598 19 0.72
147 147 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 6 0 0 0.000 0 1.00
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
3 49 51 5 gRTSALk
5 49 51 5 gRTEALk
6 49 51 5 gRTDALk
//