Complet list of 1vej hssp file
Complete list of 1vej.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1VEJ
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-11
HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 31-MAR-04 1VEJ
COMPND MOL_ID: 1; MOLECULE: RIKEN CDNA 4931431F19; CHAIN: A; FRAGMENT: UBA DO
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: MUS MUSCULUS; ORGANISM_COMMON: HOUSE M
AUTHOR Y.HIGUCHI,T.ABE,H.HIROTA,F.HAYASHI,S.YOKOYAMA,RIKEN STRUCTURAL GENOMIC
DBREF 1VEJ A 8 68 UNP Q9D4I8 Q9D4I8_MOUSE 447 507
SEQLENGTH 74
NCHAIN 1 chain(s) in 1VEJ data set
NALIGN 66
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : Q9D4I8_MOUSE1VEJ 0.98 1.00 8 69 447 508 62 0 0 510 Q9D4I8 MCG53927 OS=Mus musculus GN=4931431F19Rik PE=1 SV=1
2 : A0JPP0_RAT 0.87 0.95 8 69 447 508 62 0 0 510 A0JPP0 Protein RGD1562433 OS=Rattus norvegicus GN=RGD1562433 PE=2 SV=1
3 : L5MK66_MYODS 0.75 0.93 10 69 430 489 60 0 0 491 L5MK66 Ubiquilin-1 OS=Myotis davidii GN=MDA_GLEAN10001992 PE=4 SV=1
4 : S7MJ91_MYOBR 0.75 0.93 10 69 430 489 60 0 0 491 S7MJ91 Ubiquilin-1 OS=Myotis brandtii GN=D623_10002293 PE=4 SV=1
5 : I3MXF9_SPETR 0.74 0.92 9 69 521 581 61 0 0 581 I3MXF9 Uncharacterized protein (Fragment) OS=Spermophilus tridecemlineatus PE=4 SV=1
6 : G3IEP4_CRIGR 0.73 0.91 16 71 452 507 56 0 0 507 G3IEP4 Ubiquilin-1 OS=Cricetulus griseus GN=I79_022195 PE=4 SV=1
7 : G5BS48_HETGA 0.70 0.92 9 69 224 284 61 0 0 286 G5BS48 Ubiquilin-1 OS=Heterocephalus glaber GN=GW7_03839 PE=4 SV=1
8 : L5JPN4_PTEAL 0.70 0.88 8 71 456 519 64 0 0 519 L5JPN4 Ubiquilin-1 OS=Pteropus alecto GN=PAL_GLEAN10000125 PE=4 SV=1
9 : L5KFZ8_PTEAL 0.70 0.88 8 71 444 507 64 0 0 507 L5KFZ8 Ubiquilin-1 OS=Pteropus alecto GN=PAL_GLEAN10003315 PE=4 SV=1
10 : D2HU33_AILME 0.69 0.90 9 67 433 491 59 0 0 491 D2HU33 Putative uncharacterized protein (Fragment) OS=Ailuropoda melanoleuca GN=PANDA_015749 PE=4 SV=1
11 : S9XYY6_9CETA 0.69 0.91 8 71 457 520 64 0 0 520 S9XYY6 Ubiquilin-3 OS=Camelus ferus GN=CB1_000829006 PE=4 SV=1
12 : I3LKS5_PIG 0.68 0.89 16 71 495 550 56 0 0 550 I3LKS5 Uncharacterized protein (Fragment) OS=Sus scrofa PE=4 SV=1
13 : H0WDZ9_CAVPO 0.67 0.86 8 71 496 559 64 0 0 559 H0WDZ9 Uncharacterized protein (Fragment) OS=Cavia porcellus GN=LOC100717727 PE=4 SV=1
14 : G1ML20_AILME 0.66 0.88 8 71 455 518 64 0 0 518 G1ML20 Uncharacterized protein OS=Ailuropoda melanoleuca PE=4 SV=1
15 : L8HY70_9CETA 0.64 0.89 8 71 511 574 64 0 0 574 L8HY70 Uncharacterized protein (Fragment) OS=Bos mutus GN=M91_01820 PE=4 SV=1
16 : Q32LK0_BOVIN 0.64 0.89 8 71 511 574 64 0 0 574 Q32LK0 LOC520778 protein (Fragment) OS=Bos taurus GN=LOC520778 PE=2 SV=1
17 : F6RJU3_MONDO 0.62 0.85 12 71 450 509 60 0 0 511 F6RJU3 Uncharacterized protein OS=Monodelphis domestica GN=LOC100022717 PE=4 SV=1
18 : L8YEP9_TUPCH 0.62 0.93 11 71 437 497 61 0 0 497 L8YEP9 Ubiquilin-1 OS=Tupaia chinensis GN=TREES_T100018050 PE=4 SV=1
19 : E2RP39_CANFA 0.59 0.87 9 71 456 518 63 0 0 518 E2RP39 Uncharacterized protein OS=Canis familiaris PE=4 SV=1
20 : M3X0M7_FELCA 0.58 0.87 10 71 414 475 62 0 0 475 M3X0M7 Uncharacterized protein OS=Felis catus PE=4 SV=1
21 : M3ZLZ5_XIPMA 0.53 0.78 14 71 526 583 58 0 0 583 M3ZLZ5 Uncharacterized protein OS=Xiphophorus maculatus PE=4 SV=1
22 : I3J2B4_ORENI 0.50 0.79 14 71 526 583 58 0 0 583 I3J2B4 Uncharacterized protein OS=Oreochromis niloticus GN=ubqln4 PE=4 SV=1
23 : G7YEF2_CLOSI 0.44 0.70 1 71 372 442 71 0 0 443 G7YEF2 Ubiquilin OS=Clonorchis sinensis GN=CLF_105927 PE=4 SV=1
24 : F0VK50_NEOCL 0.42 0.64 4 67 337 400 64 0 0 405 F0VK50 Uncharacterized protein OS=Neospora caninum (strain Liverpool) GN=NCLIV_048800 PE=4 SV=1
25 : T1FTQ1_HELRO 0.42 0.73 5 66 587 648 62 0 0 653 T1FTQ1 Uncharacterized protein OS=Helobdella robusta GN=HELRODRAFT_192217 PE=4 SV=1
26 : H2UJG9_TAKRU 0.41 0.75 1 71 447 517 71 0 0 517 H2UJG9 Uncharacterized protein (Fragment) OS=Takifugu rubripes GN=LOC101073227 PE=4 SV=1
27 : G7YRB4_CLOSI 0.40 0.67 10 67 226 283 58 0 0 283 G7YRB4 Ubiquitin-like 7 (Fragment) OS=Clonorchis sinensis GN=CLF_108159 PE=4 SV=1
28 : F8N3N7_NEUT8 0.38 0.66 14 69 376 431 56 0 0 431 F8N3N7 Putative uncharacterized protein OS=Neurospora tetrasperma (strain FGSC 2508 / ATCC MYA-4615 / P0657) GN=NEUTE1DRAFT_74017 PE=4 SV=1
29 : H3GJV7_PHYRM 0.38 0.71 14 69 498 553 56 0 0 554 H3GJV7 Uncharacterized protein OS=Phytophthora ramorum PE=4 SV=1
30 : H3GJV8_PHYRM 0.38 0.71 14 69 575 630 56 0 0 631 H3GJV8 Uncharacterized protein OS=Phytophthora ramorum PE=4 SV=1
31 : V3Z758_LOTGI 0.38 0.74 1 66 436 501 66 0 0 504 V3Z758 Uncharacterized protein OS=Lottia gigantea GN=LOTGIDRAFT_128630 PE=4 SV=1
32 : Q4UIY1_THEAN 0.37 0.66 3 67 252 316 65 0 0 319 Q4UIY1 Ubiquitin-related chaperonin, putative OS=Theileria annulata GN=TA16530 PE=4 SV=1
33 : S8E3H8_FOMPI 0.37 0.76 1 70 339 408 70 0 0 409 S8E3H8 Uncharacterized protein OS=Fomitopsis pinicola (strain FP-58527) GN=FOMPIDRAFT_1164025 PE=4 SV=1
34 : D6RP84_COPC7 0.36 0.73 1 70 358 427 70 0 0 428 D6RP84 Putative uncharacterized protein OS=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=CC1G_15070 PE=4 SV=1
35 : F2U7Y9_SALR5 0.36 0.69 1 67 313 379 67 0 0 380 F2U7Y9 Putative uncharacterized protein OS=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) GN=PTSG_04623 PE=4 SV=1
36 : F4Q1Z5_DICFS 0.36 0.68 1 66 441 506 66 0 0 507 F4Q1Z5 UAS domain-containing protein OS=Dictyostelium fasciculatum (strain SH3) GN=sonA PE=4 SV=1
37 : F7VL15_SORMK 0.36 0.65 1 69 369 437 69 0 0 437 F7VL15 WGS project CABT00000000 data, contig 2.1 OS=Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell) GN=SMAC_00410 PE=4 SV=1
38 : G8YBF1_PICSO 0.36 0.66 7 67 292 352 61 0 0 353 G8YBF1 Piso0_002000 protein OS=Pichia sorbitophila (strain ATCC MYA-4447 / BCRC 22081 / CBS 7064 / NBRC 10061 / NRRL Y-12695) GN=Piso0_002000 PE=4 SV=1
39 : K5XLH1_AGABU 0.36 0.73 1 70 307 376 70 0 0 377 K5XLH1 Uncharacterized protein OS=Agaricus bisporus var. burnettii (strain JB137-S8 / ATCC MYA-4627 / FGSC 10392) GN=AGABI1DRAFT_67830 PE=4 SV=1
40 : S7QJR1_GLOTA 0.36 0.73 1 70 317 386 70 0 0 387 S7QJR1 Uncharacterized protein OS=Gloeophyllum trabeum (strain ATCC 11539 / FP-39264 / Madison 617) GN=GLOTRDRAFT_108735 PE=4 SV=1
41 : UBQL_DICDI 0.36 0.61 1 66 457 522 66 0 0 523 Q9NIF3 Ubiquilin OS=Dictyostelium discoideum GN=ubqln PE=1 SV=1
42 : W4KKP8_9HOMO 0.36 0.74 1 70 285 354 70 0 0 355 W4KKP8 Uncharacterized protein OS=Heterobasidion irregulare TC 32-1 GN=HETIRDRAFT_406535 PE=4 SV=1
43 : W4ZLV1_WHEAT 0.36 0.64 7 67 473 533 61 0 0 537 W4ZLV1 Uncharacterized protein OS=Triticum aestivum PE=4 SV=1
44 : C1N944_MICPC 0.35 0.64 2 67 252 317 66 0 0 318 C1N944 Predicted protein OS=Micromonas pusilla (strain CCMP1545) GN=MICPUCDRAFT_30357 PE=4 SV=1
45 : G4ZFC2_PHYSP 0.35 0.71 2 69 350 417 68 0 0 418 G4ZFC2 Putative uncharacterized protein OS=Phytophthora sojae (strain P6497) GN=PHYSODRAFT_354538 PE=4 SV=1
46 : L7MJ04_9ACAR 0.35 0.74 2 67 324 389 66 0 0 401 L7MJ04 Putative ubiquitin-like protein (Fragment) OS=Rhipicephalus pulchellus PE=2 SV=1
47 : A5DY87_LODEL 0.34 0.68 3 67 316 380 65 0 0 382 A5DY87 Deubiquitination-protection protein dph1 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) GN=LELG_02324 PE=4 SV=1
48 : A7ANH7_BABBO 0.34 0.68 7 74 332 399 68 0 0 404 A7ANH7 Putative uncharacterized protein OS=Babesia bovis GN=BBOV_III005480 PE=4 SV=1
49 : F5HGZ8_NEUCS 0.34 0.64 6 69 368 431 64 0 0 431 F5HGZ8 Related to ubiquitin-like protein DSK2 OS=Neurospora crassa GN=B18P24.090 PE=4 SV=1
50 : G0QX00_ICHMG 0.34 0.67 1 67 278 344 67 0 0 347 G0QX00 Putative uncharacterized protein OS=Ichthyophthirius multifiliis (strain G5) GN=IMG5_136800 PE=4 SV=1
51 : G4U605_NEUT9 0.34 0.64 6 69 368 431 64 0 0 431 G4U605 Uncharacterized protein OS=Neurospora tetrasperma (strain FGSC 2509 / P0656) GN=NEUTE2DRAFT_146308 PE=4 SV=1
52 : I1FG39_AMPQE 0.34 0.68 1 68 520 587 68 0 0 587 I1FG39 Uncharacterized protein OS=Amphimedon queenslandica GN=LOC100638011 PE=4 SV=1
53 : K4BAF0_SOLLC 0.34 0.66 7 67 489 549 61 0 0 553 K4BAF0 Uncharacterized protein OS=Solanum lycopersicum GN=Solyc02g082800.2 PE=4 SV=1
54 : K9HWC0_AGABB 0.34 0.74 1 70 307 376 70 0 0 377 K9HWC0 Uncharacterized protein OS=Agaricus bisporus var. bisporus (strain H97 / ATCC MYA-4626 / FGSC 10389) GN=AGABI2DRAFT_213246 PE=4 SV=1
55 : M0ZMN8_SOLTU 0.34 0.66 7 67 488 548 61 0 0 552 M0ZMN8 Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400001571 PE=4 SV=1
56 : Q7SGY8_NEUCR 0.34 0.64 6 69 368 431 64 0 0 431 Q7SGY8 Deubiquitination-protection protein dph1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=NCU03028 PE=4 SV=2
57 : S2K5E3_MUCC1 0.34 0.66 1 67 436 502 67 0 0 503 S2K5E3 Ubiquilin OS=Mucor circinelloides f. circinelloides (strain 1006PhL) GN=HMPREF1544_05806 PE=4 SV=1
58 : S6B220_BABBO 0.34 0.68 7 74 332 399 68 0 0 404 S6B220 Uncharacterized protein OS=Babesia bovis GN=BBOV_III005480 PE=2 SV=1
59 : F8PD95_SERL9 0.33 0.71 2 70 314 382 69 0 0 383 F8PD95 Putative uncharacterized protein OS=Serpula lacrymans var. lacrymans (strain S7.9) GN=SERLADRAFT_364132 PE=4 SV=1
60 : F8QDA1_SERL3 0.33 0.71 2 70 314 382 69 0 0 383 F8QDA1 Putative uncharacterized protein OS=Serpula lacrymans var. lacrymans (strain S7.3) GN=SERLA73DRAFT_97505 PE=4 SV=1
61 : M8A2J7_TRIUA 0.33 0.67 1 67 646 712 67 0 0 716 M8A2J7 Ubiquilin-1 OS=Triticum urartu GN=TRIUR3_26492 PE=4 SV=1
62 : D8UA62_VOLCA 0.32 0.62 1 69 397 464 69 1 1 464 D8UA62 Putative uncharacterized protein OS=Volvox carteri GN=VOLCADRAFT_102285 PE=4 SV=1
63 : G4MYL1_MAGO7 0.32 0.61 1 69 350 418 69 0 0 418 G4MYL1 Deubiquitination-protection protein dph1 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=MGG_01318 PE=4 SV=1
64 : G7DZY2_MIXOS 0.32 0.68 1 68 276 343 68 0 0 344 G7DZY2 Uncharacterized protein OS=Mixia osmundae (strain CBS 9802 / IAM 14324 / JCM 22182 / KY 12970) GN=Mo02803 PE=4 SV=1
65 : L7ILE6_MAGOY 0.32 0.61 1 69 350 418 69 0 0 418 L7ILE6 Deubiquitination-protection protein dph1 OS=Magnaporthe oryzae (strain Y34) GN=OOU_Y34scaffold00103g22 PE=4 SV=1
66 : L7JLV8_MAGOP 0.32 0.61 1 69 350 418 69 0 0 418 L7JLV8 Deubiquitination-protection protein dph1 OS=Magnaporthe oryzae (strain P131) GN=OOW_P131scaffold00178g8 PE=4 SV=1
## ALIGNMENTS 1 - 66
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A G 0 0 131 23 17 G G A GGGGG GGGG G T G G SGGGGG
2 2 A S + 0 0 128 28 68 S I A GFSTG GAMA GPP G S G F AAGGGAGG
3 3 A S - 0 0 110 30 75 G P GALGTGL ALGA GGNG L A A G GGLGLNLL
4 4 A G + 0 0 74 31 30 GG T TGGGQGG GGGG GAAG G D G G GGGGGPGG
5 5 A S - 0 0 122 32 70 TSGA ATGLPAG SGMA FGSG G T A Y GGAGAFAA
6 6 A S + 0 0 126 35 72 PFGG TTLGATM GLGG GFAA GLGT G GN MMGGGAGG
7 7 A G + 0 0 64 41 29 NGGV SPGATGGGGGGGGGGAGAGGGGGGGGGAGGGGGGGG
8 8 A A - 0 0 99 50 71 AA AA A AAAA FSGP PFGGTQGAAGMFQGGAASGGGGGAGGLSGGGLLMLL
9 9 A R S S- 0 0 234 54 88 RS H RNNNH NNNN K AMSS SQLGGRMGGLGNNFAPGKLLLGLGLLSKAALGGGGG
10 10 A A - 0 0 87 58 63 AAAAA TAAAA AAAA AA DGGMS TPGLAPGALGNPQPASASGGGGGLGGDSGGGGNANN
11 11 A C + 0 0 136 59 79 CCCCC CCCCC CCCC CCC VSGPS TTAGTGGGGGNFPGMAGAGGGGSGSGFAGGGLMFMM
12 12 A S - 0 0 111 60 82 SSSSS SSSSP SSPPSSSF LFGTS TTFSTTFGGGNFSAGSASFMFGGGGFQSFFVFFGFF
13 13 A Q - 0 0 158 60 76 QQQQQ PQQQQ LQQQPQQQ RGGEA EMGPPTGAFLSGQGASGSGGGGGFGGPSGGPGGSGG
14 14 A S + 0 0 113 65 68 SSSSS SSSPS SPSSPPSSGGSGQNAGPPTPGASSGGGGSGAAAPADGGGGLGLGPDGGNMMGMM
15 15 A S + 0 0 69 65 74 STTTT TTTTT TTTTPTTTSGSMPPSNGGPFAAAPSSASTAGGSAAPNFNGGAGNQPVVIIGAGG
16 16 A Q S S+ 0 0 194 67 68 QQQQQQHQQQQQQQQQPQQQGGQPGAHPSSAQQAPTPTPPTPNASGADPQPGGPGPQDPPPPAPAA
17 17 A T S S+ 0 0 129 67 76 TTSSSTSSSSSSLSSSPSSSGGANRSTVSSTAAATQAAPPRALATAADVQVEVPVVQDPPTPPAPP
18 18 A A - 0 0 68 67 58 AASSSAPPPSSTPSSSPSSSGGNSPSAAPPGPAAPAAAPAPAGAPPPAANAEPPPAQATTVASASS
19 19 A L - 0 0 129 67 79 LLQQLLLLLSLLLSSSQVLLNSPAAPEPAATPPGGAPPPPPPGAASPPPSPLNPNPQPPPSPPPPP
20 20 A P + 0 0 137 67 73 PPSSSSTFFSPSFSSSRSSPGALPSSPPAAVVAGAAPEAAVANAAAQSPAPSRARPQSSSEAPTPP
21 21 A T > - 0 0 61 67 75 TASSSLSSSSSSSSSSSSSSTTSDLNIDPPPDDDPNDDDDNDGPPEDIDDDPSDSDPIDDLADDDD
22 22 A S G >> S+ 0 0 87 67 76 SSTTYPSSSSCRSSCCPSFSSTTANTANAASTTTGQNNVTQTTSAVNSNNNENANNSSAATVNTNN
23 23 A L G 34 S+ 0 0 136 67 89 LPLLLLLPPLPPLLPPPFSPQQVQEQVRGGLRRRQERRRRERVEGARLRRREVRVRELRRVARRRR
24 24 A F G <4 S+ 0 0 142 67 76 FFPPALLHHLLLLLLLPLLLTTPPTTHPNNVPPPAPPPPPPSPPNDPPPPPRPPPPPPPPPDPPPP
25 25 A T T <> S+ 0 0 39 67 48 TTTTTNTTTTATTTAAANPTPPPPPPTPPPPPPPPPPPPPPPPPPPPSPPPLPPPPPSPPPPPPPP
26 26 A E T < S+ 0 0 53 67 12 EEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEESEEEEEEEEEEAEDEEEAEEEEEDEEDEEEEE
27 27 A G T 4 S+ 0 0 55 67 65 GDSSGGSGGGSGSGDDGGGGVVNEQVSEEEQEEESQEEEEQEETEVEVEEEREEEEVVEEEVEEEE
28 28 A R T 4 S+ 0 0 173 67 51 RRRRRRHRRCCPRCHHRRCLRRRRRRRRIIRRRRRRRRRRRRLLITRRRKRRLRLRRRRRRARRRR
29 29 A Y S X S+ 0 0 26 67 3 YYYYYYYYYYYYYYYYYYFYFFYYYFWYYYFFFFYFYYFFFFYYYYYYYYYYYFYYFYFFYYYFYY
30 30 A Q H > S+ 0 0 121 67 59 QQQQHQQQQQQQQQQQQQQQQQAARQAAAAASQQSTAEQQRQAAAQEAAQARAQAARAQQAAAEAA
31 31 A Q H > S+ 0 0 113 67 82 QQQQQQQQQQQQQQQQQKQRTSSRPSTESSSSVVSVEQVTLVTSSNSHEEEVTVTEDHVVTTEGEE
32 32 A E H >> S+ 0 0 52 67 28 EEEEEEEEEDEEEDEEEEEEQQQQQQQQQQQQQQEQQQQQQQQQQQQEQQQQQQQQQEQQQQQQQQ
33 33 A L H 3X S+ 0 0 10 67 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
34 34 A E H 3< S+ 0 0 118 67 66 EEEEEEEEEEEEEEEEDEEEDDEEEDARTTEQQQQQRRQQEQGATQRQRVRNAQARAQQQAQRRRR
35 35 A E H XX S+ 0 0 67 67 34 EEHHQQQHHHHHQHHHQHHHQQMSQQQQQQQSQQQQQQQQQQQQQQQQQQQIQQQQQQQQQQQQQQ
36 36 A L H 3X>S+ 0 0 0 67 4 LLLLLLLLLLLLLLLLLLLQLLLLLLLLLLLLLLLLLLLLLLLLLLLMLLLLLLLLLMLLLLLLLL
37 37 A K H 3<5S+ 0 0 139 67 69 KKKKKKKKKKKKKKKKKKKRNNARANANNNTQQQQRNNQQEQQKNRNLNENEQQQNELQQQANSNN
38 38 A A H <45S+ 0 0 85 67 54 AAAAAAAAAVAAAVAAAAAAAASEAAEDDDTEDDDDDDDEEDEDDDDDDADGDDDDEDDDEDDEDD
39 39 A L H <5S- 0 0 93 67 2 LLMMLLLMMMMMLMMMMMMMMMMMMMMMMMMMMMMMMMMMLMMMMMMMMMMMMMMMMMMMMMMMMM
40 40 A G T <5S+ 0 0 57 67 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
41 41 A F < + 0 0 35 67 6 FFFFFFFFFFFFFFFFFFFFFFFFFFVFFFFFFFFFFFFFFFFFFIFLFFFFFFFFFLFFFFFFFF
42 42 A A + 0 0 59 67 87 AAAAATAAAAAAAAAATAATIIIILITFPPVTTTTLFFTTVSFFSAFEFTFLFTFFSETTFFYHYY
43 43 A N > - 0 0 97 67 30 NNNNNNNNNNNNNNNNNNNNNNNDNNDDNNDDNNDDDDNNDNDDNNDDDNDEDNDDEDNNDDDDDD
44 44 A R H > S+ 0 0 106 67 88 RHRRHHRHHCRRRCRRRHHRRRRRRREFRRRQAAEPFFAARATERDFRFKFRTATFKRAAPRFAFF
45 45 A D H > S+ 0 0 104 67 54 DDDDDDNDDNDDNNDDDDDDEEEDEELDDDQAQQAADDSSASAAEADDDNDTQSQDSDSSQQDQDD
46 46 A A H > S+ 0 0 18 67 71 AAAAAAAAAAAAAAAAAAAAAAAAAAARQQAAQQAEQRQQAQEQQTRLRVRAEQERSLQQESSRSS
47 47 A N H X S+ 0 0 2 67 16 NNNNNNNNNNNNNNNNNNNNNNNNNNANNNNNNNNNNNNNNNNNNCNCNNNNNNNNNCNNNNNNNN
48 48 A L H X>S+ 0 0 7 67 34 LLLLLLLLLLLLLLLLLLLLLLLILLRVVVILVIIIVVVIIVIIILVIVIVLIIIVVIIIIIVIVV
49 49 A Q H X5S+ 0 0 145 67 63 QQQQQQQQQQQQQQQQQQQQQQQQQQQARRQQRRAQAARRSRRRRQETAEAQRRRARTRRRAARAA
50 50 A A H X5S+ 0 0 4 67 10 AAAAAAAAAAAAAAAAAATAAAAASAAAAAAAAAAAAAAAAAAAAAAVAAAAAAAAAVAAAAAAAA
51 51 A L H ><>S+ 0 0 0 67 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
52 52 A V H ><5S+ 0 0 58 67 74 VVMMMIIMMVVMIVMMIMMMIIIQIIERQQTVLLQLRRMLTLMQQVRERKRMVMVRLELLLQRMRR
53 53 A A H 3< - 0 0 69 66 45 DDDDDDDDDDDDDDDDDDDDDDDDDDDSNNDDNNNNSSNNNNNNNDSDSNSDNNNSNDNNN.SNSS
58 58 A I H > S+ 0 0 19 67 20 IIIIIIIIIIIIIIIIIVISIIVVVIIVVVVIVVVVVVVVIVVVVVVLVVVIVVVVVLVVVVVVVV
59 59 A H H > S+ 0 0 138 67 54 HHHHYHHHHHHHPHHHHHQHNNNNNNAQHHNSHHHNQQHHNHHSHQQVQEQNHHHQQVHHHNQQQQ
60 60 A A H > S+ 0 0 17 67 43 AAAAAAAAAAAAAAAAAAVTAAAAAALGAAAASSLAGGSSLSAAAAGAGAGTASAGAASSAAGAGG
61 61 A A H X S+ 0 0 0 67 0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
62 62 A I H >X S+ 0 0 39 67 15 IIIIIIITTIIVIIIIIIIIIIVIIIVIVVIIIIVIIVIIIIVIVLIIIVIIVIVIIIIIVVIIII
63 63 A E H 3X>S+ 0 0 105 67 16 EEEEEEEEEEEEEEEEEEEDEEDSDEQEEEDAEEQEEEEEDEEEEEEDEEEDEEEEEDEEEEEEEE
64 64 A M H 3<5S+ 0 0 69 67 72 MKKRRRRRRRRRKRRRRRKRRRRRRRLHRRRRYYRRHYYYRYRRRLYLHRHKRYRHYLYYRRHYHH
65 65 A L H <<5S+ 0 0 42 67 12 LLLLLLLLLLLLLLLLLLLMLLLLLLLLLLLLIILLLLIILILLLLLFLLLLLILLLFIILLLLLL
66 66 A L H <5S- 0 0 126 67 10 LLLLLLLLLLLLLLLLLMLLLLLLLLFLLLLLLLLLLLLLLLLLLFLQLLLLLLLLLQLLLLLFLL
67 67 A G T <5S+ 0 0 70 63 39 GGGGGGGGGGGGEGGGGGGGGGQE GGGSS NGGG GSSS GGSSSSSGNGNGSGGSSGGGGNSNN
68 68 A A < + 0 0 53 48 74 AAEEMSEEE VVEVIIPMLVSSS S GGG GG G GG G G LG GG G G LGG ASASS
69 69 A S - 0 0 87 46 64 PPPPPPPPP SPPPPPGPPPQQN Q SAA GG S GG G T SS S G S SGG PS SS
70 70 A G + 0 0 73 28 64 Q EE EEQEEEIHEEPPQ P GG GG G E G EGG
71 71 A P - 0 0 112 20 50 A AA AAAAAAPAAASSP S P P
72 72 A S + 0 0 121 3 86 D D
73 73 A S 0 0 127 3 0 S S
74 74 A G 0 0 118 3 0 G G
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 87 4 0 4 4 0 0 0 0 0 0 0 0 23 0 0 0.531 17 0.82
2 2 A 0 0 4 4 7 0 0 39 21 7 14 4 0 0 0 0 0 0 0 0 28 0 0 1.709 57 0.31
3 3 A 0 27 0 0 0 0 0 40 17 3 3 3 0 0 0 0 0 0 7 0 30 0 0 1.538 51 0.24
4 4 A 0 0 0 0 0 0 0 77 6 3 0 6 0 0 0 0 3 0 0 3 31 0 0 0.884 29 0.69
5 5 A 0 3 0 3 6 0 3 31 28 3 13 9 0 0 0 0 0 0 0 0 32 0 0 1.809 60 0.29
6 6 A 0 9 0 9 6 0 0 46 11 3 3 11 0 0 0 0 0 0 3 0 35 0 0 1.743 58 0.28
7 7 A 2 0 0 0 0 0 0 78 10 2 2 2 0 0 0 0 0 0 2 0 41 0 0 0.873 29 0.70
8 8 A 0 10 0 4 6 0 0 34 30 4 6 2 0 0 0 0 4 0 0 0 50 0 0 1.760 58 0.28
9 9 A 0 17 0 4 2 0 0 24 7 2 9 0 0 4 7 6 2 0 17 0 54 0 0 2.172 72 0.11
10 10 A 0 5 0 2 0 0 0 28 36 7 7 3 0 0 0 0 2 0 7 3 58 0 0 1.802 60 0.37
11 11 A 2 2 0 7 5 0 0 31 7 3 7 5 31 0 0 0 0 0 2 0 59 0 0 1.897 63 0.20
12 12 A 2 2 0 2 23 0 0 17 3 5 35 8 0 0 0 0 2 0 2 0 60 0 0 1.817 60 0.17
13 13 A 0 3 0 2 3 0 0 33 5 10 8 2 0 0 2 0 28 3 0 0 60 0 0 1.855 61 0.23
14 14 A 0 3 0 6 0 0 0 29 9 14 29 2 0 0 0 0 2 0 3 3 65 0 0 1.834 61 0.32
15 15 A 3 0 3 2 3 0 0 17 14 11 14 26 0 0 0 0 2 0 6 0 65 0 0 2.060 68 0.26
16 16 A 0 0 0 0 0 0 0 10 12 25 4 4 0 3 0 0 36 0 1 3 67 0 0 1.756 58 0.32
17 17 A 9 3 0 0 0 0 0 3 16 15 27 13 0 0 3 0 4 1 1 3 67 0 0 2.103 70 0.23
18 18 A 1 0 0 0 0 0 0 6 31 27 24 4 0 0 0 0 1 1 3 0 67 0 0 1.659 55 0.41
19 19 A 1 21 0 0 0 0 0 4 10 37 12 1 0 0 0 0 6 1 4 0 67 0 0 1.819 60 0.20
20 20 A 4 1 0 0 4 0 0 3 22 22 27 3 0 0 4 0 3 3 1 0 67 0 0 1.985 66 0.26
21 21 A 0 4 4 0 0 0 0 1 3 12 30 6 0 0 0 0 0 1 4 33 67 0 0 1.796 59 0.24
22 22 A 4 0 0 0 1 0 1 1 12 3 25 19 4 0 1 0 3 1 21 0 67 0 0 2.049 68 0.24
23 23 A 9 19 0 0 1 0 0 4 3 13 1 0 0 0 31 0 7 9 0 0 67 0 0 1.947 64 0.11
24 24 A 1 18 0 0 4 0 0 0 3 52 1 6 0 4 1 0 0 0 4 3 67 0 0 1.631 54 0.24
25 25 A 0 1 0 0 0 0 0 0 6 64 3 22 0 0 0 0 0 0 3 0 67 0 0 1.060 35 0.52
26 26 A 0 0 0 0 0 0 0 0 3 0 1 0 0 0 0 0 0 90 0 6 67 0 0 0.435 14 0.88
27 27 A 12 0 0 0 0 0 0 19 0 0 10 1 0 0 1 0 6 43 1 4 67 0 0 1.666 55 0.34
28 28 A 0 7 4 0 0 0 0 0 1 1 0 1 6 4 72 1 0 0 0 0 67 0 0 1.130 37 0.48
29 29 A 0 0 0 0 27 1 72 0 0 0 0 0 0 0 0 0 0 0 0 0 67 0 0 0.655 21 0.96
30 30 A 0 0 0 0 0 0 0 0 34 0 3 1 0 1 6 0 49 4 0 0 67 0 0 1.254 41 0.40
31 31 A 13 1 0 0 0 0 0 1 0 1 16 12 0 3 3 1 30 13 1 1 67 0 0 2.037 67 0.17
32 32 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 64 33 0 3 67 0 0 0.755 25 0.71
33 33 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 67 0 0 0.000 0 1.00
34 34 A 1 0 0 0 0 0 0 1 9 0 0 4 0 0 16 0 22 37 1 6 67 0 0 1.711 57 0.34
35 35 A 0 0 1 1 0 0 0 0 0 0 3 0 0 19 0 0 70 4 0 0 67 0 0 0.936 31 0.66
36 36 A 0 96 0 3 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 67 0 0 0.211 7 0.96
37 37 A 0 3 0 0 0 0 0 0 6 0 1 1 0 0 6 31 21 6 24 0 67 0 0 1.768 59 0.30
38 38 A 3 0 0 0 0 0 0 1 36 0 1 1 0 0 0 0 0 13 0 43 67 0 0 1.293 43 0.46
39 39 A 0 12 0 88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 67 0 0 0.366 12 0.97
40 40 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 67 0 0 0.000 0 1.00
41 41 A 1 3 1 0 94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 67 0 0 0.288 9 0.94
42 42 A 3 4 7 0 19 0 4 0 28 3 4 21 0 1 0 0 0 3 0 0 67 0 0 1.991 66 0.13
43 43 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 58 39 67 0 0 0.787 26 0.70
44 44 A 0 0 0 0 15 0 0 0 13 3 0 4 3 10 40 3 1 4 0 1 67 0 0 1.874 62 0.12
45 45 A 0 1 0 0 0 0 0 0 10 0 10 1 0 0 0 0 12 9 7 48 67 0 0 1.614 53 0.45
46 46 A 1 3 0 0 0 0 0 0 49 0 7 1 0 0 10 0 19 7 0 0 67 0 0 1.521 50 0.29
47 47 A 0 0 0 0 0 0 0 0 1 0 0 0 4 0 0 0 0 0 94 0 67 0 0 0.260 8 0.84
48 48 A 24 43 31 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 67 0 0 1.131 37 0.66
49 49 A 0 0 0 0 0 0 0 0 16 0 1 3 0 0 27 0 49 3 0 0 67 0 0 1.271 42 0.37
50 50 A 3 0 0 0 0 0 0 0 94 0 1 1 0 0 0 0 0 0 0 0 67 0 0 0.288 9 0.89
51 51 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 67 0 0 0.000 0 1.00
52 52 A 15 13 13 24 0 0 0 0 0 0 0 3 0 0 15 1 10 4 0 0 67 0 0 1.992 66 0.25
53 53 A 1 0 0 0 0 0 0 0 73 0 1 3 0 0 15 0 3 3 0 0 67 0 0 0.953 31 0.51
54 54 A 0 0 0 0 0 0 0 0 3 0 18 79 0 0 0 0 0 0 0 0 67 0 0 0.598 19 0.70
55 55 A 0 3 0 3 3 0 0 60 4 0 1 0 0 0 0 1 0 0 10 13 67 0 0 1.393 46 0.47
56 56 A 0 0 0 0 0 0 0 97 0 0 0 0 0 0 1 0 0 0 1 0 67 1 0 0.155 5 0.94
57 57 A 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 33 52 66 0 0 0.994 33 0.55
58 58 A 57 3 39 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 67 0 0 0.857 28 0.80
59 59 A 3 0 0 0 0 0 1 0 1 1 3 0 0 51 0 0 21 1 16 0 67 0 0 1.429 47 0.45
60 60 A 1 4 0 0 0 0 0 15 64 0 12 3 0 0 0 0 0 0 0 0 67 0 0 1.129 37 0.56
61 61 A 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 67 0 0 0.000 0 1.00
62 62 A 21 1 75 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 67 0 0 0.713 23 0.85
63 63 A 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 3 82 0 12 67 0 0 0.646 21 0.84
64 64 A 0 6 0 3 0 0 18 0 0 0 0 0 0 12 54 7 0 0 0 0 67 0 0 1.362 45 0.27
65 65 A 0 84 12 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 67 0 0 0.571 19 0.88
66 66 A 0 91 0 1 4 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 67 0 0 0.392 13 0.89
67 67 A 0 0 0 0 0 0 0 63 0 0 22 0 0 0 0 0 2 3 10 0 63 0 0 1.022 34 0.61
68 68 A 8 6 4 4 0 0 0 35 10 2 17 0 0 0 0 0 0 13 0 0 48 0 0 1.888 63 0.26
69 69 A 0 0 0 0 0 0 0 20 4 39 26 2 0 0 0 0 7 0 2 0 46 0 0 1.518 50 0.36
70 70 A 0 0 4 0 0 0 0 32 0 11 0 0 0 4 0 0 11 39 0 0 28 0 0 1.449 48 0.36
71 71 A 0 0 0 0 0 0 0 0 60 25 15 0 0 0 0 0 0 0 0 0 20 0 0 0.938 31 0.50
72 72 A 0 0 0 0 0 0 0 0 0 0 33 0 0 0 0 0 0 0 0 67 3 0 0 0.637 21 0.13
73 73 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 3 0 0 0.000 0 1.00
74 74 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0.000 0 1.00
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
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