Complet list of 1vdl hssp file
Complete list of 1vdl.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1VDL
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-11
HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 23-MAR-04 1VDL
COMPND MOL_ID: 1; MOLECULE: UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 25; CHAIN:
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: MUS MUSCULUS; ORGANISM_COMMON: HOUSE M
AUTHOR Y.DOI-KATAYAMA,H.HIROTA,K.SAITO,S.KOSHIBA,T.KIGAWA, S.YOKOYAMA,RIKEN S
DBREF 1VDL A 8 74 UNP P57080 UBP25_MOUSE 1 67
SEQLENGTH 80
NCHAIN 1 chain(s) in 1VDL data set
NALIGN 72
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : D4ACD3_RAT 0.99 1.00 8 75 1 68 68 0 0 1055 D4ACD3 Ubiquitin carboxyl-terminal hydrolase OS=Rattus norvegicus GN=Usp25 PE=3 SV=1
2 : Q8CBA4_MOUSE 0.99 1.00 8 75 1 68 68 0 0 311 Q8CBA4 Putative uncharacterized protein (Fragment) OS=Mus musculus GN=Usp25 PE=2 SV=2
3 : Q9CSW6_MOUSE 0.99 1.00 8 75 1 68 68 0 0 160 Q9CSW6 Putative uncharacterized protein (Fragment) OS=Mus musculus GN=Usp25 PE=2 SV=1
4 : UBP25_MOUSE 1VDL 0.99 1.00 8 75 1 68 68 0 0 1055 P57080 Ubiquitin carboxyl-terminal hydrolase 25 OS=Mus musculus GN=Usp25 PE=1 SV=2
5 : E2QW53_CANFA 0.97 0.99 8 75 1 68 68 0 0 1085 E2QW53 Ubiquitin carboxyl-terminal hydrolase OS=Canis familiaris GN=USP25 PE=3 SV=2
6 : J9PA48_CANFA 0.97 0.99 8 75 1 68 68 0 0 1123 J9PA48 Ubiquitin carboxyl-terminal hydrolase OS=Canis familiaris GN=USP25 PE=3 SV=1
7 : U6DU54_NEOVI 0.97 0.99 8 75 1 68 68 0 0 185 U6DU54 USP25 protein (Fragment) OS=Neovison vison GN=Q96B65 PE=2 SV=1
8 : F7ARV7_CALJA 0.96 0.99 8 75 1 68 68 0 0 1125 F7ARV7 Ubiquitin carboxyl-terminal hydrolase OS=Callithrix jacchus GN=USP25 PE=3 SV=1
9 : F7DY46_CALJA 0.96 0.99 8 75 1 68 68 0 0 450 F7DY46 Uncharacterized protein OS=Callithrix jacchus GN=USP25 PE=4 SV=1
10 : F7F5L2_CALJA 0.96 0.99 8 75 1 68 68 0 0 1055 F7F5L2 Ubiquitin carboxyl-terminal hydrolase OS=Callithrix jacchus GN=USP25 PE=2 SV=1
11 : F7F5Q1_CALJA 0.96 0.99 8 75 1 68 68 0 0 1087 F7F5Q1 Ubiquitin carboxyl-terminal hydrolase OS=Callithrix jacchus GN=USP25 PE=3 SV=1
12 : G1M7F7_AILME 0.96 0.99 9 75 1 67 67 0 0 1084 G1M7F7 Ubiquitin carboxyl-terminal hydrolase (Fragment) OS=Ailuropoda melanoleuca GN=USP25 PE=3 SV=1
13 : G1QNB5_NOMLE 0.96 0.99 8 75 1 68 68 0 0 1054 G1QNB5 Ubiquitin carboxyl-terminal hydrolase OS=Nomascus leucogenys GN=USP25 PE=3 SV=1
14 : G3QGR2_GORGO 0.96 0.99 8 75 1 68 68 0 0 1087 G3QGR2 Ubiquitin carboxyl-terminal hydrolase OS=Gorilla gorilla gorilla GN=101144968 PE=3 SV=1
15 : H2QKV1_PANTR 0.96 0.99 8 75 1 68 68 0 0 1055 H2QKV1 Ubiquitin carboxyl-terminal hydrolase OS=Pan troglodytes GN=USP25 PE=2 SV=1
16 : K9J075_DESRO 0.96 0.99 8 75 1 68 68 0 0 1054 K9J075 Ubiquitin carboxyl-terminal hydrolase OS=Desmodus rotundus PE=2 SV=1
17 : Q96B65_HUMAN 0.96 0.99 8 75 1 68 68 0 0 450 Q96B65 USP25 protein OS=Homo sapiens GN=USP25 PE=2 SV=1
18 : UBP25_HUMAN 0.96 0.99 8 75 1 68 68 0 0 1055 Q9UHP3 Ubiquitin carboxyl-terminal hydrolase 25 OS=Homo sapiens GN=USP25 PE=1 SV=4
19 : G1SMF4_RABIT 0.94 0.99 8 75 1 68 68 0 0 1152 G1SMF4 Ubiquitin carboxyl-terminal hydrolase OS=Oryctolagus cuniculus GN=USP25 PE=3 SV=2
20 : H0UXL2_CAVPO 0.94 0.99 8 75 1 68 68 0 0 1086 H0UXL2 Ubiquitin carboxyl-terminal hydrolase OS=Cavia porcellus GN=USP25 PE=3 SV=1
21 : H9EU68_MACMU 0.94 0.99 8 75 1 68 68 0 0 1055 H9EU68 Ubiquitin carboxyl-terminal hydrolase OS=Macaca mulatta GN=USP25 PE=2 SV=1
22 : H9YWA9_MACMU 0.94 0.99 8 75 1 68 68 0 0 1055 H9YWA9 Ubiquitin carboxyl-terminal hydrolase OS=Macaca mulatta GN=USP25 PE=2 SV=1
23 : F6SNZ3_MONDO 0.91 0.99 8 75 1 68 68 0 0 443 F6SNZ3 Uncharacterized protein OS=Monodelphis domestica PE=4 SV=2
24 : U3FVP0_MICFL 0.88 0.96 8 75 1 68 68 0 0 1041 U3FVP0 Ubiquitin carboxyl-terminal hydrolase OS=Micrurus fulvius PE=2 SV=1
25 : V8NS20_OPHHA 0.88 0.96 8 75 1 68 68 0 0 1074 V8NS20 Ubiquitin carboxyl-terminal hydrolase OS=Ophiophagus hannah GN=USP25 PE=3 SV=1
26 : Q28BY1_XENTR 0.87 0.91 8 75 1 67 68 1 1 1046 Q28BY1 Ubiquitin carboxyl-terminal hydrolase OS=Xenopus tropicalis GN=usp25 PE=2 SV=1
27 : Q6DDW3_XENLA 0.85 0.91 8 75 1 67 68 1 1 1046 Q6DDW3 Ubiquitin carboxyl-terminal hydrolase OS=Xenopus laevis GN=usp25 PE=2 SV=1
28 : H0X9P3_OTOGA 0.77 0.84 10 75 3 71 69 1 3 1057 H0X9P3 Ubiquitin carboxyl-terminal hydrolase (Fragment) OS=Otolemur garnettii GN=USP25 PE=3 SV=1
29 : M3YH27_MUSPF 0.77 0.86 9 75 3 72 70 1 3 1127 M3YH27 Ubiquitin carboxyl-terminal hydrolase OS=Mustela putorius furo GN=USP25 PE=3 SV=1
30 : T0MI70_9CETA 0.77 0.81 7 75 22 84 69 1 6 797 T0MI70 Ubiquitin carboxyl-terminal hydrolase OS=Camelus ferus GN=CB1_000706032 PE=3 SV=1
31 : G3VV54_SARHA 0.76 0.96 8 75 1 68 68 0 0 311 G3VV54 Uncharacterized protein (Fragment) OS=Sarcophilus harrisii GN=USP25 PE=4 SV=1
32 : F7AII7_ORNAN 0.74 0.86 8 75 1 69 69 1 1 1049 F7AII7 Ubiquitin carboxyl-terminal hydrolase (Fragment) OS=Ornithorhynchus anatinus GN=USP25 PE=3 SV=1
33 : F7AIJ4_ORNAN 0.74 0.86 8 75 1 69 69 1 1 1081 F7AIJ4 Ubiquitin carboxyl-terminal hydrolase (Fragment) OS=Ornithorhynchus anatinus GN=USP25 PE=3 SV=1
34 : H2L4L8_ORYLA 0.72 0.84 8 75 1 67 68 1 1 1086 H2L4L8 Ubiquitin carboxyl-terminal hydrolase OS=Oryzias latipes PE=3 SV=1
35 : H2L4M0_ORYLA 0.72 0.84 8 75 1 67 68 1 1 448 H2L4M0 Uncharacterized protein OS=Oryzias latipes PE=4 SV=1
36 : I3KFS1_ORENI 0.72 0.84 8 75 1 67 68 1 1 1169 I3KFS1 Ubiquitin carboxyl-terminal hydrolase OS=Oreochromis niloticus GN=usp25 PE=3 SV=1
37 : V9KCI7_CALMI 0.72 0.87 8 74 1 66 67 1 1 1053 V9KCI7 Ubiquitin carboxyl-terminal hydrolase OS=Callorhynchus milii PE=2 SV=1
38 : E7FFB3_DANRE 0.71 0.84 8 75 1 67 68 1 1 1073 E7FFB3 Ubiquitin carboxyl-terminal hydrolase OS=Danio rerio GN=usp25 PE=3 SV=1
39 : F6T5L1_XENTR 0.71 0.82 8 75 1 67 68 1 1 1050 F6T5L1 Ubiquitin carboxyl-terminal hydrolase (Fragment) OS=Xenopus tropicalis GN=usp25 PE=3 SV=1
40 : F8W4Z8_DANRE 0.71 0.84 8 75 1 67 68 1 1 1072 F8W4Z8 Ubiquitin carboxyl-terminal hydrolase OS=Danio rerio GN=usp25 PE=3 SV=1
41 : G3Q9R1_GASAC 0.71 0.84 8 75 1 67 68 1 1 448 G3Q9R1 Uncharacterized protein OS=Gasterosteus aculeatus PE=4 SV=1
42 : G3Q9R2_GASAC 0.71 0.84 8 75 1 67 68 1 1 1085 G3Q9R2 Ubiquitin carboxyl-terminal hydrolase OS=Gasterosteus aculeatus PE=3 SV=1
43 : Q7ZVQ4_DANRE 0.71 0.84 8 75 1 67 68 1 1 1072 Q7ZVQ4 Ubiquitin carboxyl-terminal hydrolase OS=Danio rerio GN=usp25 PE=2 SV=1
44 : H0ZTK0_TAEGU 0.69 0.85 8 75 1 68 68 0 0 1075 H0ZTK0 Ubiquitin carboxyl-terminal hydrolase OS=Taeniopygia guttata GN=USP25 PE=3 SV=1
45 : M4AHZ0_XIPMA 0.69 0.84 8 75 1 67 68 1 1 1078 M4AHZ0 Ubiquitin carboxyl-terminal hydrolase OS=Xiphophorus maculatus PE=3 SV=1
46 : W5UC16_ICTPU 0.69 0.84 8 75 1 67 68 1 1 1069 W5UC16 Ubiquitin carboxyl-terminal hydrolase 25 OS=Ictalurus punctatus GN=USP25 PE=2 SV=1
47 : F1NCR4_CHICK 0.68 0.78 2 75 15 86 74 1 2 1135 F1NCR4 Ubiquitin carboxyl-terminal hydrolase OS=Gallus gallus PE=3 SV=2
48 : W5LXU8_LEPOC 0.68 0.84 8 75 1 67 68 1 1 1116 W5LXU8 Uncharacterized protein OS=Lepisosteus oculatus PE=4 SV=1
49 : H2RIS6_TAKRU 0.66 0.82 8 75 1 67 68 1 1 1080 H2RIS6 Ubiquitin carboxyl-terminal hydrolase OS=Takifugu rubripes GN=LOC101070250 PE=3 SV=1
50 : H2RIS7_TAKRU 0.66 0.82 8 75 1 67 68 1 1 1070 H2RIS7 Ubiquitin carboxyl-terminal hydrolase OS=Takifugu rubripes GN=LOC101070250 PE=3 SV=1
51 : Q4T9Q3_TETNG 0.66 0.85 8 75 1 67 68 1 1 254 Q4T9Q3 Chromosome undetermined SCAF7510, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00004635001 PE=4 SV=1
52 : H3CBU7_TETNG 0.62 0.82 8 75 1 67 68 1 1 159 H3CBU7 Uncharacterized protein OS=Tetraodon nigroviridis PE=4 SV=1
53 : H3CKN5_TETNG 0.41 0.70 8 75 1 68 69 2 2 1047 H3CKN5 Ubiquitin carboxyl-terminal hydrolase OS=Tetraodon nigroviridis PE=3 SV=1
54 : H9GEW5_ANOCA 0.40 0.68 8 79 1 75 75 1 3 1130 H9GEW5 Ubiquitin carboxyl-terminal hydrolase OS=Anolis carolinensis GN=USP28 PE=3 SV=2
55 : F6U6L7_MONDO 0.39 0.62 8 80 1 77 77 1 4 1929 F6U6L7 Ubiquitin carboxyl-terminal hydrolase OS=Monodelphis domestica GN=USP28 PE=3 SV=2
56 : F6U785_MONDO 0.39 0.63 8 79 1 76 76 1 4 1072 F6U785 Ubiquitin carboxyl-terminal hydrolase OS=Monodelphis domestica GN=USP28 PE=3 SV=1
57 : B7Q0B5_IXOSC 0.38 0.57 15 77 3 69 68 2 6 1161 B7Q0B5 Ubiquitin carboxyl-terminal hydrolase OS=Ixodes scapularis GN=IscW_ISCW008894 PE=3 SV=1
58 : V9KCE9_CALMI 0.38 0.68 8 79 1 67 72 1 5 1028 V9KCE9 Ubiquitin carboxyl-terminal hydrolase (Fragment) OS=Callorhynchus milii PE=2 SV=1
59 : V9KB28_CALMI 0.37 0.67 8 80 1 68 73 1 5 1124 V9KB28 Ubiquitin carboxyl-terminal hydrolase OS=Callorhynchus milii PE=2 SV=1
60 : E7FD72_DANRE 0.36 0.68 8 80 1 73 73 0 0 1163 E7FD72 Ubiquitin carboxyl-terminal hydrolase OS=Danio rerio GN=usp28 PE=3 SV=1
61 : E9QC12_DANRE 0.36 0.69 8 79 1 72 72 0 0 1041 E9QC12 Ubiquitin carboxyl-terminal hydrolase OS=Danio rerio GN=usp28 PE=3 SV=1
62 : V5HL30_IXORI 0.36 0.58 8 76 1 78 78 2 9 162 V5HL30 Putative ubiquitin specific protease 25 (Fragment) OS=Ixodes ricinus PE=2 SV=1
63 : H2MI42_ORYLA 0.34 0.66 10 80 3 73 71 0 0 1087 H2MI42 Ubiquitin carboxyl-terminal hydrolase (Fragment) OS=Oryzias latipes PE=3 SV=1
64 : H2U797_TAKRU 0.34 0.64 11 80 7 70 70 1 6 1059 H2U797 Ubiquitin carboxyl-terminal hydrolase (Fragment) OS=Takifugu rubripes PE=3 SV=1
65 : H2U798_TAKRU 0.34 0.64 11 80 7 70 70 1 6 1028 H2U798 Ubiquitin carboxyl-terminal hydrolase (Fragment) OS=Takifugu rubripes PE=3 SV=1
66 : H2U7A1_TAKRU 0.34 0.64 11 80 4 67 70 1 6 1051 H2U7A1 Ubiquitin carboxyl-terminal hydrolase (Fragment) OS=Takifugu rubripes PE=3 SV=1
67 : H2U7A2_TAKRU 0.34 0.64 11 80 4 67 70 1 6 1039 H2U7A2 Ubiquitin carboxyl-terminal hydrolase (Fragment) OS=Takifugu rubripes PE=3 SV=1
68 : I3JSR1_ORENI 0.34 0.70 5 80 3 78 76 0 0 1209 I3JSR1 Ubiquitin carboxyl-terminal hydrolase OS=Oreochromis niloticus GN=LOC100693992 PE=3 SV=1
69 : F1NHA0_CHICK 0.33 0.60 14 80 4 57 67 1 13 1030 F1NHA0 Ubiquitin carboxyl-terminal hydrolase (Fragment) OS=Gallus gallus GN=USP28 PE=3 SV=2
70 : G1MVA5_MELGA 0.32 0.60 13 80 3 57 68 1 13 1030 G1MVA5 Ubiquitin carboxyl-terminal hydrolase (Fragment) OS=Meleagris gallopavo GN=USP28 PE=3 SV=2
71 : M4A302_XIPMA 0.32 0.63 8 80 1 72 73 1 1 1195 M4A302 Ubiquitin carboxyl-terminal hydrolase OS=Xiphophorus maculatus PE=3 SV=1
72 : UBP28_CHICK 0.31 0.62 1 80 8 74 80 1 13 1047 Q5ZID5 Ubiquitin carboxyl-terminal hydrolase 28 OS=Gallus gallus GN=USP28 PE=2 SV=1
## ALIGNMENTS 1 - 70
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A G 0 0 133 2 53
2 2 A S + 0 0 111 3 35 G
3 3 A S - 0 0 107 3 67 E
4 4 A G S S+ 0 0 89 3 0 G
5 5 A S + 0 0 83 4 67 K S
6 6 A S S S- 0 0 89 4 68 R S
7 7 A G S S- 0 0 65 5 60 G I A
8 8 A M S S+ 0 0 201 62 4 MMMMMMMMMMM MMMMMMMMMMMMMMM MLLLMMMMMVMMMMMMMLMMMMMMMMM MMMMM M
9 9 A T > - 0 0 69 64 43 TTTTTTTTTTTTTTTTTTTTTTTTTTT TQNGGTTTTTSTTTTRTTETTTTTTTTT TTRRT R
10 10 A V T 3 S+ 0 0 125 66 44 VVVVVVVVVVVVVVVVVVVVVVVVVVVIEEIVVVVVVVIVVVVAVVSVVVVVVAAA AAVVVI A
11 11 A E T 3 S+ 0 0 152 70 27 EEEEEEEEEEEEEEEEEEEEEEEEEEEEKSQEEEEEEESEEEEDEENEEEEEEAEE GGEEELEEEED
12 12 A Q S < S+ 0 0 125 70 56 QQQQQQQQQQQQQQQQQQQQQQQQQQQRQVYQQQQQQQTQQQQGQQHQQQQQQRLL EEQQHNSSSSQ
13 13 A N S >> S+ 0 0 100 71 60 NNNNNNNNNNNNNNNNNNNNNNNNNNNGKESMMNNNNNRNNNNENNGNNNNNNPQQ SSEESADDDDS Q
14 14 A V T 34 S+ 0 0 109 72 58 VVVVVVVVVVVVVVVVVVVVVVVVVVVLMSITTVVVLVSVVVVFVVAVVVVVVEQQ QQFFSMVVVVEVV
15 15 A L T 3> S+ 0 0 79 73 70 LLLLLLLLLLLLLLLLLLLLLLLLLLLKLLFQQLLLVLVLLLLVLLLLLLLLLGEELPPEELLCCCCNLL
16 16 A Q H <> S+ 0 0 98 73 48 QQQQQQQQQQQQQQQQQQQQQQQQQQQQRPQKKQQQQQAQQQQEQQSQQQQQQEDDQEEHHDQHHHHGNN
17 17 A Q H < S- 0 0 146 73 54 QQQQQQQQQQQQQQQQQQQQQQQQQQQmwHEwwQQQQQEQQQQEQQSQQQQQQaaaQEEGGnKQQQQEKK
18 18 A S H > S+ 0 0 67 41 83 SSSSSSSSSSSSSSSSSSSSSSSSS..vw.Arr..........K.......H.gee...EEqT....N..
19 19 A A H < S+ 0 0 51 62 84 AAAAAAAAAAAAAAAAAAAAAATNNNNFS.SSSHHHHHNHHHHAHH.HHHHSHSSSQ..TTQL....S..
20 20 A A T < S+ 0 0 29 63 74 AAAAAAAAAAAAAAAAAAAAAASSSSSNI.GRRSSSSSMSSSSTSSPSAASQSPHHR..SSRN....T..
21 21 A Q T 4 S+ 0 0 118 63 54 QQQQQQQQQQQQQQQQQQQQQQQQQQQSN.KNNQQQQQQQQQQSQQLQQQQKQAGGE..EEEK....N..
22 22 A K S < S+ 0 0 146 63 50 KKKKKKKKKKKKKKKKKKKKKKKKKKKKE.KQQKKKKKQKKKKRKKKKKKKHKPSSE..NNEK....S..
23 23 A H > - 0 0 110 64 57 HHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHHHHHHHHH.GNSSTNNSSTQ....Q..
24 24 A Q H >> S+ 0 0 91 70 66 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQRSCCASSSSASGGGGS..
25 25 A Q H 3> S+ 0 0 133 70 40 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPSQQRSSQQRKDDDDE..
26 26 A T H 3> S+ 0 0 51 70 60 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTVMMLLLMMLMLLLLM..
27 27 A F H X S+ 0 0 67 70 5 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQVQQQQQQQQQQQQQQQ..
31 31 A L H 3X S+ 0 0 0 73 3 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLILLLLLLLLLLLLLLLMM
32 32 A R H 3< S+ 0 0 120 73 23 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRKRRKKKKTRRRKRRRRKQRRRRRKK
33 33 A E H << S+ 0 0 171 73 4 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEPEEEEEEEEEEEEEEEEE
34 34 A I H < S+ 0 0 82 73 9 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIVVVVVIVVVVIVVIVIIIILIIIIIIIIIIIIIIIII
35 35 A T S < S- 0 0 41 73 4 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTLTTTTTTTTTTTTTTTTT
36 36 A G + 0 0 54 73 3 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGPGGGGGGGGGGGGGGGGG
37 37 A I - 0 0 26 73 35 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIITTTTTITTTTITTITTTTTLIIIVIIIIVIIIIIIII
38 38 A N + 0 0 117 73 69 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTNTNTTTTNTTNTTTTTLQQQEQQQQEQQQQQQQQ
39 39 A D > - 0 0 82 73 3 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDHDDDDDDDDDDDDDDDDD
40 40 A A H > S+ 0 0 50 73 79 AAAAAAATTTTATTTTTTTTTTTTTLLTAATIIVVVIVLVVVVIIVIVVVVVSPPPANNPPAQPPPPQAA
41 41 A Q H 4 S+ 0 0 145 73 36 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHHQQRLSSARRQQAQQQQQQDD
42 42 A I H > S+ 0 0 66 73 34 IIIIIIIIIIIIIIIIIIIIIIIVVIVIIIIIILLLLLILLLLVLLVLLLLLVFFFILLVVIVVVVVIFF
43 43 A L H X S+ 0 0 3 73 5 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLKLLLLLLLLLLLLLLLLL
44 44 A Q H X S+ 0 0 82 73 43 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQLHHHEQQQQEYHHHHYHH
45 45 A Q H > S+ 0 0 84 73 52 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQKQQQQEEQQHEEEQQQSSQKSSSSRAA
46 46 A A H X S+ 0 0 0 73 4 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAALAAAAAAAAAAAAAAAAA
47 47 A L H X>S+ 0 0 34 73 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
48 48 A K H <5S+ 0 0 147 73 53 KKKKKKKKKKKQKKKKKKKKKKKKKKKKKKKKKQQQQQKQQQQKQQKQQQQQLKKKEQQNNEKNNNNNKK
49 49 A D H <5S+ 0 0 78 73 71 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDVVVAVDVVVVDVVDVVVAAQAAAAVVAAAAAAAAVAA
50 50 A S H <5S- 0 0 13 73 19 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSaASSsSSGGsSSSSSSAA
51 51 A N T <5S- 0 0 150 73 42 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNKKNNNNNNNNNNNNNNNNNDDdNNNdNNQQdHQQQQQKK
52 52 A G S - 0 0 78 73 32 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNDDDDDNDDDDNDDNDDDDDDNDDDDDDDDDDDDDDNN
54 54 A L H > S+ 0 0 43 73 24 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLVLLLMMMMMLIILIIIILVVVVVILL
55 55 A E H > S+ 0 0 156 73 74 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAGAVEVAAVEAAEATTTTTVTTSNNSSSGGGGGGMM
56 56 A L H > S+ 0 0 66 73 79 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEEEELEEEELEELEEEEEEQQQQQQHHQHLLLLHEE
57 57 A A H X S+ 0 0 0 73 0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
58 58 A V H X S+ 0 0 28 73 7 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVIIVVVVVVVLL
59 59 A A H X S+ 0 0 41 73 46 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGSSSSSGGSGGGGGGII
60 60 A F H < S+ 0 0 57 73 22 FFFFFFFFFFFFFFFFFFFFFFFLLFFFFFFFFFFFFFFFFFFFFFFFFFFFFFLLMFFLLMLLLLLLVV
61 61 A L H >X S+ 0 0 6 73 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
62 62 A T H 3< S+ 0 0 68 73 10 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTSTTVTTTTVTTTTTTTT
63 63 A A T 3< S+ 0 0 79 73 65 AAAAAAAAAAAAAAAAAASAAAAAAAAAAAAAAEEEEEAEEEEAEEAEEEEEEEDDDNNTTDTSSSSTEE
64 64 A K T <4 S+ 0 0 134 73 51 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKAEEEEEQQEPQQQQQEE
65 65 A N S < S+ 0 0 134 73 60 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNNNNHRRDSSPPDTPPPPTRR
66 66 A A - 0 0 80 73 46 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAASAATAAVVVAVVAAAPPAVPPPPADD
67 67 A K - 0 0 200 73 52 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKQQQQQKKKTRREETGEEEEEQQ
68 68 A T - 0 0 111 73 76 TTTTTTTTTTTTTTTTTTTSTTTIILLTTTTAAVVVAVLVVVVVVVVVVVAAAEEEADDEEAVVVVVLEE
69 69 A P - 0 0 93 73 45 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPSSSSSSPPSPPEESQQQQQQPP
70 70 A P S S+ 0 0 143 73 63 PPPPQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHHPPPSSSPSSHHPDDDDDDVG
71 71 A Q - 0 0 153 73 43 QQQQQQQQQQQQQQQQQQQQQQQQQPPQQQQQQQQQQQPQQQQLQQQQQQQQQQQQAQQMMAPPPPPPQQ
72 72 A E S S+ 0 0 184 73 49 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDDDEDEDDDDEDDEDDDDDDEDDAGGPPAGGGGGGNN
73 73 A E S S- 0 0 173 73 41 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDDEEEEEEKKEEEGTTSTTEESEDDDDETT
74 74 A T + 0 0 118 73 62 TTTTTTTTTTTTTTTTTTTTAAATTAATTTTTTTTTAAAATTAATAAATTSSSTIITVVQQTPPPPPPAA
75 75 A S - 0 0 107 72 67 AGGGTTTTTTTTTTTTTTTTTTTTTTTTTATTTTTT TTTAATTTTTTSSSSSAAAHAATTHQQQQQQAA
76 76 A G - 0 0 60 20 62 TAAGDDTTGEEEEEEAA
77 77 A P - 0 0 135 19 67 EEETEETT SSSSSSEE
78 78 A S + 0 0 111 18 69 APP PPAA AKKKKGPP
79 79 A S 0 0 122 18 68 SSS DDNN TTTTTTSS
80 80 A G 0 0 132 14 50 E NN PSSSSSSS
## ALIGNMENTS 71 - 72
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....8....:....9....:....0....:....1....:....2....:....3....:....4
1 1 A G 0 0 133 2 53 A
2 2 A S + 0 0 111 3 35 S
3 3 A S - 0 0 107 3 67 G
4 4 A G S S+ 0 0 89 3 0 G
5 5 A S + 0 0 83 4 67 P
6 6 A S S S- 0 0 89 4 68 G
7 7 A G S S- 0 0 65 5 60 G
8 8 A M S S+ 0 0 201 62 4 ML
9 9 A T > - 0 0 69 64 43 RE
10 10 A V T 3 S+ 0 0 125 66 44 AA
11 11 A E T 3 S+ 0 0 152 70 27 ED
12 12 A Q S < S+ 0 0 125 70 56 QC
13 13 A N S >> S+ 0 0 100 71 60 SQ
14 14 A V T 34 S+ 0 0 109 72 58 EV
15 15 A L T 3> S+ 0 0 79 73 70 NL
16 16 A Q H <> S+ 0 0 98 73 48 GN
17 17 A Q H < S- 0 0 146 73 54 EK
18 18 A S H > S+ 0 0 67 41 83 ..
19 19 A A H < S+ 0 0 51 62 84 N.
20 20 A A T < S+ 0 0 29 63 74 S.
21 21 A Q T 4 S+ 0 0 118 63 54 T.
22 22 A K S < S+ 0 0 146 63 50 N.
23 23 A H > - 0 0 110 64 57 S.
24 24 A Q H >> S+ 0 0 91 70 66 L.
25 25 A Q H 3> S+ 0 0 133 70 40 K.
26 26 A T H 3> S+ 0 0 51 70 60 M.
27 27 A F H X S+ 0 0 67 70 5 Q.
31 31 A L H 3X S+ 0 0 0 73 3 LM
32 32 A R H 3< S+ 0 0 120 73 23 KK
33 33 A E H << S+ 0 0 171 73 4 EE
34 34 A I H < S+ 0 0 82 73 9 II
35 35 A T S < S- 0 0 41 73 4 TT
36 36 A G + 0 0 54 73 3 GG
37 37 A I - 0 0 26 73 35 II
38 38 A N + 0 0 117 73 69 QQ
39 39 A D > - 0 0 82 73 3 DD
40 40 A A H > S+ 0 0 50 73 79 QA
41 41 A Q H 4 S+ 0 0 145 73 36 QD
42 42 A I H > S+ 0 0 66 73 34 VF
43 43 A L H X S+ 0 0 3 73 5 LL
44 44 A Q H X S+ 0 0 82 73 43 YH
45 45 A Q H > S+ 0 0 84 73 52 KA
46 46 A A H X S+ 0 0 0 73 4 AA
47 47 A L H X>S+ 0 0 34 73 0 LL
48 48 A K H <5S+ 0 0 147 73 53 KK
49 49 A D H <5S+ 0 0 78 73 71 AA
50 50 A S H <5S- 0 0 13 73 19 SA
51 51 A N T <5S- 0 0 150 73 42 QK
52 52 A G S - 0 0 78 73 32 DN
54 54 A L H > S+ 0 0 43 73 24 VL
55 55 A E H > S+ 0 0 156 73 74 GM
56 56 A L H > S+ 0 0 66 73 79 HE
57 57 A A H X S+ 0 0 0 73 0 AA
58 58 A V H X S+ 0 0 28 73 7 VL
59 59 A A H X S+ 0 0 41 73 46 GI
60 60 A F H < S+ 0 0 57 73 22 LV
61 61 A L H >X S+ 0 0 6 73 0 LL
62 62 A T H 3< S+ 0 0 68 73 10 TT
63 63 A A T 3< S+ 0 0 79 73 65 TE
64 64 A K T <4 S+ 0 0 134 73 51 QE
65 65 A N S < S+ 0 0 134 73 60 TR
66 66 A A - 0 0 80 73 46 VD
67 67 A K - 0 0 200 73 52 EQ
68 68 A T - 0 0 111 73 76 VE
69 69 A P - 0 0 93 73 45 QP
70 70 A P S S+ 0 0 143 73 63 DV
71 71 A Q - 0 0 153 73 43 SQ
72 72 A E S S+ 0 0 184 73 49 AN
73 73 A E S S- 0 0 173 73 41 ET
74 74 A T + 0 0 118 73 62 PA
75 75 A S - 0 0 107 72 67 QA
76 76 A G - 0 0 60 20 62 EA
77 77 A P - 0 0 135 19 67 SE
78 78 A S + 0 0 111 18 69 GP
79 79 A S 0 0 122 18 68 AS
80 80 A G 0 0 132 14 50 SS
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 50 50 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0.693 23 0.47
2 2 A 0 0 0 0 0 0 0 33 0 0 67 0 0 0 0 0 0 0 0 0 3 0 0 0.637 21 0.64
3 3 A 0 0 0 0 0 0 0 33 0 0 33 0 0 0 0 0 0 33 0 0 3 0 0 1.099 36 0.32
4 4 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0.000 0 1.00
5 5 A 0 0 0 0 0 0 0 0 0 25 50 0 0 0 0 25 0 0 0 0 4 0 0 1.040 34 0.33
6 6 A 0 0 0 0 0 0 0 25 0 0 50 0 0 0 25 0 0 0 0 0 4 0 0 1.040 34 0.31
7 7 A 0 0 20 0 0 0 0 60 20 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0.950 31 0.40
8 8 A 2 8 0 90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 62 0 0 0.362 12 0.95
9 9 A 0 0 0 0 0 0 0 3 0 0 2 81 0 0 8 0 2 3 2 0 64 0 0 0.779 26 0.56
10 10 A 76 0 6 0 0 0 0 0 14 0 2 0 0 0 0 0 0 3 0 0 66 0 0 0.821 27 0.55
11 11 A 0 1 0 0 0 0 0 3 1 0 3 0 0 0 0 1 1 83 1 4 70 0 0 0.797 26 0.72
12 12 A 1 3 0 0 0 0 1 1 0 0 6 1 1 3 3 0 74 3 1 0 70 0 0 1.155 38 0.43
13 13 A 0 0 0 3 0 0 0 3 1 1 8 0 0 0 1 1 6 6 63 6 71 0 0 1.425 47 0.39
14 14 A 71 3 1 3 4 0 0 0 1 0 4 3 0 0 0 0 6 4 0 0 72 0 0 1.220 40 0.41
15 15 A 4 73 0 0 1 0 0 1 0 3 0 0 5 0 0 1 3 5 3 0 73 0 0 1.154 38 0.29
16 16 A 0 0 0 0 0 0 0 3 1 1 1 0 0 8 1 3 67 5 4 4 73 0 0 1.327 44 0.51
17 17 A 0 0 0 1 0 4 0 3 4 0 1 0 0 1 0 5 68 10 1 0 73 32 8 1.239 41 0.46
18 18 A 2 0 0 0 0 2 0 2 2 0 63 2 0 2 5 2 2 10 2 0 41 0 0 1.478 49 0.17
19 19 A 0 2 0 0 2 0 0 0 39 0 15 5 0 26 0 0 3 0 10 0 62 0 0 1.614 53 0.16
20 20 A 0 0 2 2 0 0 0 2 40 3 35 3 0 3 6 0 2 0 3 0 63 0 0 1.610 53 0.26
21 21 A 0 2 0 0 0 0 0 3 2 0 3 2 0 0 0 5 71 6 6 0 63 0 0 1.152 38 0.45
22 22 A 0 0 0 0 0 0 0 0 0 2 5 0 0 2 2 76 5 5 5 0 63 1 0 0.984 32 0.50
23 23 A 0 0 0 0 0 0 0 2 0 0 8 3 0 80 0 0 3 0 5 0 64 0 0 0.805 26 0.42
24 24 A 0 1 0 0 0 0 0 6 3 0 10 0 3 0 1 0 76 0 0 0 70 0 0 0.929 31 0.33
25 25 A 0 0 0 0 0 0 0 0 0 1 4 0 0 0 3 3 81 1 0 6 70 0 0 0.790 26 0.60
26 26 A 1 11 0 10 0 0 0 0 0 0 0 77 0 0 0 0 0 0 0 0 70 0 0 0.739 24 0.40
27 27 A 9 34 3 0 54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 70 0 0 1.011 33 0.69
28 28 A 0 84 13 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 70 0 0 0.529 17 0.77
29 29 A 0 0 0 0 0 0 0 1 0 0 4 0 0 0 0 3 0 1 90 0 70 0 0 0.453 15 0.76
30 30 A 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 99 0 0 0 70 0 0 0.075 2 0.94
31 31 A 0 95 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 73 0 0 0.243 8 0.96
32 32 A 0 0 0 0 0 0 0 0 0 0 0 1 0 0 82 15 1 0 0 0 73 0 0 0.564 18 0.77
33 33 A 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 99 0 0 73 0 0 0.072 2 0.96
34 34 A 16 1 82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 73 0 0 0.517 17 0.91
35 35 A 0 1 0 0 0 0 0 0 0 0 0 99 0 0 0 0 0 0 0 0 73 0 0 0.072 2 0.95
36 36 A 0 0 0 0 0 0 0 99 0 1 0 0 0 0 0 0 0 0 0 0 73 0 0 0.072 2 0.96
37 37 A 3 1 74 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 73 0 0 0.713 23 0.64
38 38 A 0 1 0 0 0 0 0 0 0 0 0 21 0 0 0 0 23 3 52 0 73 0 0 1.162 38 0.30
39 39 A 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 99 73 0 0 0.072 2 0.97
40 40 A 19 4 8 0 0 0 0 0 22 12 1 26 0 0 0 0 4 0 3 0 73 0 0 1.883 62 0.20
41 41 A 0 1 0 0 0 0 0 0 3 0 3 0 0 3 4 0 82 0 0 4 73 0 0 0.778 25 0.63
42 42 A 19 25 48 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 73 0 0 1.220 40 0.65
43 43 A 0 99 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 73 0 0 0.072 2 0.95
44 44 A 0 1 0 0 0 0 4 0 0 0 0 0 0 14 0 0 78 3 0 0 73 0 0 0.754 25 0.56
45 45 A 0 0 0 0 0 0 0 0 4 0 8 0 0 1 1 4 74 7 0 0 73 0 0 0.992 33 0.47
46 46 A 0 1 0 0 0 0 0 0 99 0 0 0 0 0 0 0 0 0 0 0 73 0 0 0.072 2 0.95
47 47 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 73 0 0 0.000 0 1.00
48 48 A 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 60 26 3 10 0 73 0 0 1.038 34 0.47
49 49 A 22 0 0 0 0 0 0 0 26 0 0 0 0 0 0 0 1 0 0 51 73 0 0 1.086 36 0.28
50 50 A 0 0 0 0 0 0 0 3 7 0 90 0 0 0 0 0 0 0 0 0 73 0 3 0.373 12 0.81
51 51 A 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 7 11 0 74 7 73 0 0 0.891 29 0.57
52 52 A 0 0 0 0 0 0 3 97 0 0 0 0 0 0 0 0 0 0 0 0 73 0 0 0.126 4 0.87
53 53 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56 44 73 0 0 0.686 22 0.67
54 54 A 10 74 10 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 73 0 0 0.856 28 0.75
55 55 A 5 0 0 4 0 0 0 11 11 0 5 10 0 0 0 0 0 51 3 0 73 0 0 1.602 53 0.25
56 56 A 0 56 0 0 0 0 0 0 0 0 0 0 0 7 0 0 10 27 0 0 73 0 0 1.087 36 0.20
57 57 A 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 73 0 0 0.000 0 1.00
58 58 A 93 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 73 0 0 0.296 9 0.92
59 59 A 0 0 4 0 0 0 0 14 74 0 8 0 0 0 0 0 0 0 0 0 73 0 0 0.832 27 0.54
60 60 A 4 18 0 3 75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 73 0 0 0.750 25 0.78
61 61 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 73 0 0 0.000 0 1.00
62 62 A 3 0 0 0 0 0 0 0 0 0 1 96 0 0 0 0 0 0 0 0 73 0 0 0.198 6 0.89
63 63 A 0 0 0 0 0 0 0 0 49 0 7 7 0 0 0 0 0 29 3 5 73 0 0 1.332 44 0.35
64 64 A 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 74 11 12 0 0 73 0 0 0.841 28 0.48
65 65 A 0 0 0 0 0 0 0 0 0 8 4 4 0 1 7 0 0 0 73 3 73 0 0 1.041 34 0.39
66 66 A 10 0 0 0 0 0 0 0 75 8 1 1 0 0 0 0 0 0 0 4 73 0 0 0.892 29 0.53
67 67 A 0 0 0 0 0 0 0 1 0 0 0 3 0 0 3 71 11 11 0 0 73 0 0 0.982 32 0.47
68 68 A 29 5 3 0 0 0 0 0 11 0 1 37 0 0 0 0 0 11 0 3 73 0 0 1.626 54 0.23
69 69 A 0 0 0 0 0 0 0 0 0 77 11 0 0 0 0 0 10 3 0 0 73 0 0 0.769 25 0.54
70 70 A 3 0 0 0 0 0 0 1 0 14 7 0 0 5 0 0 60 0 0 10 73 0 0 1.302 43 0.36
71 71 A 0 1 0 3 0 0 0 0 3 12 1 0 0 0 0 0 79 0 0 0 73 0 0 0.755 25 0.57
72 72 A 0 0 0 0 0 0 0 11 4 3 0 0 0 0 0 0 0 53 4 25 73 0 0 1.283 42 0.50
73 73 A 0 0 0 0 0 0 0 1 0 0 3 10 0 0 0 3 0 75 0 8 73 0 0 0.899 30 0.59
74 74 A 3 0 3 0 0 0 0 0 23 10 4 55 0 0 0 0 3 0 0 0 73 0 0 1.321 44 0.37
75 75 A 0 0 0 0 0 0 0 4 17 0 8 58 0 3 0 0 10 0 0 0 72 0 0 1.279 42 0.33
76 76 A 0 0 0 0 0 0 0 15 25 0 0 15 0 0 0 0 0 35 0 10 20 0 0 1.513 50 0.37
77 77 A 0 0 0 0 0 0 0 0 0 5 37 16 0 0 0 0 0 42 0 0 19 0 0 1.179 39 0.32
78 78 A 0 0 0 0 0 0 0 11 22 39 6 0 0 0 0 22 0 0 0 0 18 0 0 1.440 48 0.30
79 79 A 0 0 0 0 0 0 0 0 6 0 39 33 0 0 0 0 0 0 11 11 18 0 0 1.382 46 0.32
80 80 A 0 0 0 0 0 0 0 7 0 7 64 0 0 0 0 0 0 7 14 0 14 0 0 1.128 37 0.50
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
28 9 11 3 mGASv
29 10 12 3 wKEIw
32 11 11 1 wMr
33 11 11 1 wMr
53 43 43 1 aSd
54 11 11 3 aACGg
55 11 11 4 aASAAe
56 11 11 4 aASAAe
57 36 38 5 sRTRSGd
62 11 11 4 nHCKKq
62 44 48 5 sRTRSGd
//