Complet list of 1v5o hssp file
Complete list of 1v5o.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1V5O
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-11
HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 25-NOV-03 1V5O
COMPND MOL_ID: 1; MOLECULE: 1700011N24RIK PROTEIN; CHAIN: A; FRAGMENT: UBIQUI
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: MUS MUSCULUS; ORGANISM_COMMON: HOUSE M
AUTHOR C.ZHAO,T.KIGAWA,T.TOMIZAWA,S.KOSHIBA,M.INOUE,S.YOKOYAMA, RIKEN STRUCTU
DBREF 1V5O A 8 96 GB 12838695 BAB24297 1 89
SEQLENGTH 102
NCHAIN 1 chain(s) in 1V5O data set
NALIGN 94
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : DDI1_MOUSE 1V5O 0.95 0.98 8 102 1 95 95 0 0 408 Q9DAF3 Protein DDI1 homolog 1 OS=Mus musculus GN=Ddi1 PE=1 SV=1
2 : DDI1_RAT 0.92 0.96 8 102 1 95 95 0 0 408 A0JPP7 Protein DDI1 homolog 1 OS=Rattus norvegicus GN=Ddi1 PE=2 SV=1
3 : F6SLF4_HORSE 0.82 0.94 8 102 1 95 95 0 0 400 F6SLF4 Uncharacterized protein OS=Equus caballus GN=DDI1 PE=4 SV=1
4 : F1SV49_PIG 0.79 0.91 8 102 1 95 95 0 0 401 F1SV49 Uncharacterized protein OS=Sus scrofa GN=DDI1 PE=4 SV=1
5 : F7I704_CALJA 0.79 0.92 8 94 1 87 87 0 0 394 F7I704 Uncharacterized protein OS=Callithrix jacchus GN=DDI1 PE=4 SV=1
6 : G3TNV9_LOXAF 0.79 0.92 8 102 1 95 95 0 0 393 G3TNV9 Uncharacterized protein OS=Loxodonta africana GN=DDI1 PE=4 SV=1
7 : L5KYQ3_PTEAL 0.79 0.92 8 102 1 95 95 0 0 401 L5KYQ3 Protein DDI1 like protein 1 OS=Pteropus alecto GN=PAL_GLEAN10013830 PE=4 SV=1
8 : H0UUW6_CAVPO 0.78 0.91 8 102 1 95 95 0 0 396 H0UUW6 Uncharacterized protein OS=Cavia porcellus GN=DDI1 PE=4 SV=1
9 : H2NF42_PONAB 0.78 0.89 8 102 1 95 95 0 0 396 H2NF42 Uncharacterized protein OS=Pongo abelii GN=DDI1 PE=4 SV=1
10 : M3W3L8_FELCA 0.78 0.94 8 86 1 79 79 0 0 340 M3W3L8 Uncharacterized protein OS=Felis catus GN=DDI1 PE=4 SV=1
11 : DDI1_HUMAN 3S8I 0.77 0.88 8 102 1 95 95 0 0 396 Q8WTU0 Protein DDI1 homolog 1 OS=Homo sapiens GN=DDI1 PE=1 SV=1
12 : DDI1_MACFA 0.77 0.88 8 102 1 95 95 0 0 396 Q95JI3 Protein DDI1 homolog 1 OS=Macaca fascicularis GN=DDI1 PE=2 SV=1
13 : F1MG01_BOVIN 0.77 0.91 8 97 1 90 90 0 0 396 F1MG01 Protein DDI1 homolog 1 OS=Bos taurus GN=DDI1 PE=4 SV=2
14 : F7GE01_MACMU 0.77 0.88 8 102 1 95 95 0 0 396 F7GE01 Uncharacterized protein OS=Macaca mulatta GN=DDI1 PE=4 SV=1
15 : G1SC27_NOMLE 0.77 0.88 8 102 1 95 95 0 0 396 G1SC27 Uncharacterized protein OS=Nomascus leucogenys GN=DDI1 PE=4 SV=1
16 : G7PNL1_MACFA 0.77 0.88 8 102 1 95 95 0 0 396 G7PNL1 Putative uncharacterized protein OS=Macaca fascicularis GN=EGM_06170 PE=4 SV=1
17 : I3M3V2_SPETR 0.77 0.86 8 102 1 95 95 0 0 420 I3M3V2 Uncharacterized protein OS=Spermophilus tridecemlineatus GN=DDI1 PE=4 SV=1
18 : G1QGG0_MYOLU 0.76 0.92 8 102 1 95 95 0 0 398 G1QGG0 Uncharacterized protein OS=Myotis lucifugus GN=DDI1 PE=4 SV=1
19 : G1T966_RABIT 0.76 0.93 8 102 1 95 95 0 0 404 G1T966 Uncharacterized protein OS=Oryctolagus cuniculus GN=DDI1 PE=4 SV=1
20 : G3RAE7_GORGO 0.76 0.87 8 102 1 95 95 0 0 396 G3RAE7 Uncharacterized protein OS=Gorilla gorilla gorilla GN=101135484 PE=4 SV=1
21 : H0XSR1_OTOGA 0.76 0.89 8 102 1 95 95 0 0 375 H0XSR1 Uncharacterized protein OS=Otolemur garnettii GN=DDI1 PE=4 SV=1
22 : S7MCG3_MYOBR 0.75 0.91 8 102 1 95 95 0 0 398 S7MCG3 Protein DDI1 like protein 1 OS=Myotis brandtii GN=D623_10033738 PE=4 SV=1
23 : L8J1M7_9CETA 0.74 0.87 8 102 1 95 95 0 0 396 L8J1M7 Protein DDI1-like protein 1 OS=Bos mutus GN=M91_05579 PE=4 SV=1
24 : DDI1_BOVIN 0.73 0.86 8 102 1 95 95 0 0 396 Q2T9Z1 Protein DDI1 homolog 1 OS=Bos taurus GN=DDI1 PE=2 SV=1
25 : D2HZ90_AILME 0.72 0.87 8 102 1 95 95 0 0 398 D2HZ90 Putative uncharacterized protein (Fragment) OS=Ailuropoda melanoleuca GN=PANDA_018116 PE=4 SV=1
26 : F6XP41_CANFA 0.72 0.87 8 102 1 95 95 0 0 400 F6XP41 Uncharacterized protein OS=Canis familiaris GN=DDI1 PE=4 SV=1
27 : G1MLG4_AILME 0.72 0.87 8 102 1 95 95 0 0 399 G1MLG4 Uncharacterized protein OS=Ailuropoda melanoleuca GN=DDI1 PE=4 SV=1
28 : W5Q629_SHEEP 0.72 0.84 8 102 1 95 95 0 0 396 W5Q629 Uncharacterized protein OS=Ovis aries GN=DDI1 PE=4 SV=1
29 : F7EJZ7_CALJA 0.71 0.87 8 96 1 89 89 0 0 399 F7EJZ7 Uncharacterized protein OS=Callithrix jacchus GN=DDI2 PE=4 SV=1
30 : F7FRY1_CALJA 0.71 0.87 8 96 1 89 89 0 0 255 F7FRY1 Uncharacterized protein OS=Callithrix jacchus GN=DDI2 PE=4 SV=1
31 : F7FRZ5_CALJA 0.71 0.87 8 97 1 90 90 0 0 213 F7FRZ5 Uncharacterized protein OS=Callithrix jacchus GN=DDI2 PE=4 SV=1
32 : M3Y4W8_MUSPF 0.68 0.88 8 97 1 90 90 0 0 361 M3Y4W8 Uncharacterized protein OS=Mustela putorius furo GN=DDI1 PE=4 SV=1
33 : D2HH12_AILME 0.67 0.84 8 102 1 95 95 0 0 394 D2HH12 Putative uncharacterized protein (Fragment) OS=Ailuropoda melanoleuca GN=PANDA_010359 PE=4 SV=1
34 : DDI2_HUMAN 0.67 0.84 8 102 1 95 95 0 0 399 Q5TDH0 Protein DDI1 homolog 2 OS=Homo sapiens GN=DDI2 PE=1 SV=1
35 : E2QUJ5_CANFA 0.67 0.83 8 102 1 95 95 0 0 399 E2QUJ5 Uncharacterized protein OS=Canis familiaris GN=DDI2 PE=4 SV=1
36 : F7C7X8_MONDO 0.67 0.83 8 102 1 95 95 0 0 398 F7C7X8 Uncharacterized protein OS=Monodelphis domestica GN=DDI2 PE=4 SV=1
37 : F7GNT7_MACMU 0.67 0.84 8 102 1 95 95 0 0 399 F7GNT7 Uncharacterized protein OS=Macaca mulatta GN=DDI2 PE=4 SV=1
38 : G1LZH8_AILME 0.67 0.84 8 102 1 95 95 0 0 399 G1LZH8 Uncharacterized protein OS=Ailuropoda melanoleuca GN=DDI2 PE=4 SV=1
39 : G1SAA9_NOMLE 0.67 0.84 8 102 1 95 95 0 0 1022 G1SAA9 Uncharacterized protein OS=Nomascus leucogenys GN=DDI2 PE=4 SV=2
40 : G3RCH4_GORGO 0.67 0.84 8 102 1 95 95 0 0 364 G3RCH4 Uncharacterized protein OS=Gorilla gorilla gorilla GN=101138380 PE=4 SV=1
41 : G3SEM0_GORGO 0.67 0.84 8 102 1 95 95 0 0 401 G3SEM0 Uncharacterized protein OS=Gorilla gorilla gorilla GN=101138380 PE=4 SV=1
42 : G7MU24_MACMU 0.67 0.84 8 102 1 95 95 0 0 394 G7MU24 Putative uncharacterized protein (Fragment) OS=Macaca mulatta GN=EGK_17173 PE=4 SV=1
43 : G7NU86_MACFA 0.67 0.84 8 102 1 95 95 0 0 394 G7NU86 Putative uncharacterized protein (Fragment) OS=Macaca fascicularis GN=EGM_00239 PE=4 SV=1
44 : H2N8Z2_PONAB 0.67 0.84 8 102 1 95 95 0 0 399 H2N8Z2 Uncharacterized protein OS=Pongo abelii GN=DDI2 PE=4 SV=1
45 : H2PY38_PANTR 0.67 0.84 8 102 1 95 95 0 0 394 H2PY38 Uncharacterized protein OS=Pan troglodytes GN=DDI2 PE=4 SV=1
46 : L5KIZ7_PTEAL 0.67 0.84 8 102 1 95 95 0 0 1531 L5KIZ7 Pleckstrin like proteiny domain-containing family M member 2 OS=Pteropus alecto GN=PAL_GLEAN10012954 PE=4 SV=1
47 : M3WNC2_FELCA 0.67 0.84 8 102 1 95 95 0 0 399 M3WNC2 Uncharacterized protein OS=Felis catus GN=DDI2 PE=4 SV=1
48 : U6CVB1_NEOVI 0.67 0.84 8 102 1 95 95 0 0 398 U6CVB1 Protein DDI1 homolog 2 OS=Neovison vison GN=DDI2 PE=2 SV=1
49 : E1B9T9_BOVIN 0.66 0.84 8 102 1 95 95 0 0 399 E1B9T9 Uncharacterized protein OS=Bos taurus GN=DDI2 PE=4 SV=2
50 : F1SUU7_PIG 0.66 0.84 8 102 1 95 95 0 0 399 F1SUU7 Uncharacterized protein OS=Sus scrofa GN=DDI2 PE=4 SV=1
51 : F6XNN8_MONDO 0.66 0.83 8 97 1 90 90 0 0 369 F6XNN8 Uncharacterized protein OS=Monodelphis domestica GN=LOC100027707 PE=4 SV=1
52 : G3TM23_LOXAF 0.66 0.84 8 102 1 95 95 0 0 399 G3TM23 Uncharacterized protein OS=Loxodonta africana GN=DDI2 PE=4 SV=1
53 : H0XQY7_OTOGA 0.66 0.84 8 102 1 95 95 0 0 401 H0XQY7 Uncharacterized protein OS=Otolemur garnettii GN=DDI2 PE=4 SV=1
54 : H0XV46_OTOGA 0.66 0.84 8 102 1 95 95 0 0 404 H0XV46 Uncharacterized protein OS=Otolemur garnettii GN=DDI2 PE=4 SV=1
55 : K9IJL9_DESRO 0.66 0.83 8 102 1 95 95 0 0 399 K9IJL9 Putative dna damage inducible protein OS=Desmodus rotundus PE=2 SV=1
56 : L8J1T5_9CETA 0.66 0.84 8 102 1 95 95 0 0 399 L8J1T5 Protein DDI1-like protein 2 OS=Bos mutus GN=M91_10955 PE=4 SV=1
57 : L9L0N8_TUPCH 0.66 0.84 8 102 1 95 95 0 0 1455 L9L0N8 Pleckstrin homology domain-containing family M member 2 OS=Tupaia chinensis GN=TREES_T100008748 PE=4 SV=1
58 : T0MHC7_9CETA 0.66 0.84 8 102 1 95 95 0 0 992 T0MHC7 Beta-subunit of Na/D-glucose cotransporter-like protein OS=Camelus ferus GN=CB1_001086008 PE=4 SV=1
59 : W5PHE6_SHEEP 0.66 0.84 8 102 1 95 95 0 0 399 W5PHE6 Uncharacterized protein OS=Ovis aries GN=DDI2 PE=4 SV=1
60 : DDI2_MOUSE 0.65 0.84 8 102 1 95 95 0 0 399 A2ADY9 Protein DDI1 homolog 2 OS=Mus musculus GN=Ddi2 PE=1 SV=1
61 : G5BRT1_HETGA 0.65 0.84 8 102 1 95 95 0 0 394 G5BRT1 DDI1-like protein 2 (Fragment) OS=Heterocephalus glaber GN=GW7_15513 PE=4 SV=1
62 : Q4V8J5_RAT 0.65 0.84 8 102 1 95 95 0 0 299 Q4V8J5 DNA-damage inducible protein 2 OS=Rattus norvegicus GN=Ddi2 PE=2 SV=1
63 : DDI2_XENLA 0.63 0.81 8 98 1 91 91 0 0 393 Q7ZYA7 Protein DDI1 homolog 2 OS=Xenopus laevis GN=ddi2 PE=2 SV=1
64 : DDI2_XENTR 0.63 0.81 8 98 1 91 91 0 0 394 Q497D6 Protein DDI1 homolog 2 OS=Xenopus tropicalis GN=ddi2 PE=2 SV=1
65 : E1C2C2_CHICK 0.63 0.82 8 102 1 95 95 0 0 452 E1C2C2 Uncharacterized protein OS=Gallus gallus GN=DDI2 PE=4 SV=2
66 : G3WWS0_SARHA 0.63 0.79 8 98 1 91 91 0 0 389 G3WWS0 Uncharacterized protein OS=Sarcophilus harrisii GN=LOC100926359 PE=4 SV=1
67 : K7FW99_PELSI 0.62 0.81 8 102 1 92 95 1 3 399 K7FW99 Uncharacterized protein OS=Pelodiscus sinensis GN=DDI2 PE=4 SV=1
68 : H0YV28_TAEGU 0.61 0.82 8 102 1 95 95 0 0 393 H0YV28 Uncharacterized protein OS=Taeniopygia guttata GN=DDI2 PE=4 SV=1
69 : J3SC26_CROAD 0.59 0.80 8 102 1 95 95 0 0 410 J3SC26 DNA-damage inducible 1 homolog 2 OS=Crotalus adamanteus PE=2 SV=1
70 : T1E5Z8_CROHD 0.59 0.80 8 102 1 95 95 0 0 410 T1E5Z8 DDI1 2-like protein OS=Crotalus horridus PE=2 SV=1
71 : H3A669_LATCH 0.57 0.80 8 102 1 93 95 1 2 1052 H3A669 Uncharacterized protein OS=Latimeria chalumnae GN=DDI2 PE=4 SV=2
72 : V9KB72_CALMI 0.57 0.82 8 97 1 90 90 0 0 411 V9KB72 Regulatory solute carrier protein family 1 member 1 OS=Callorhynchus milii PE=2 SV=1
73 : G3PF41_GASAC 0.52 0.67 8 102 1 95 95 0 0 411 G3PF41 Uncharacterized protein OS=Gasterosteus aculeatus PE=4 SV=1
74 : M4AQG8_XIPMA 0.52 0.69 8 102 1 95 95 0 0 422 M4AQG8 Uncharacterized protein OS=Xiphophorus maculatus PE=4 SV=1
75 : W5K3T1_ASTMX 0.52 0.72 8 93 1 86 86 0 0 395 W5K3T1 Uncharacterized protein OS=Astyanax mexicanus PE=4 SV=1
76 : W5MMY9_LEPOC 0.52 0.69 8 102 1 94 95 1 1 438 W5MMY9 Uncharacterized protein OS=Lepisosteus oculatus PE=4 SV=1
77 : H2N1T7_ORYLA 0.51 0.68 8 102 1 95 95 0 0 265 H2N1T7 Uncharacterized protein OS=Oryzias latipes GN=LOC101159071 PE=4 SV=1
78 : I3J8B9_ORENI 0.51 0.68 8 102 1 95 95 0 0 413 I3J8B9 Uncharacterized protein OS=Oreochromis niloticus GN=LOC100700917 PE=4 SV=1
79 : DDI2_DANRE 0.49 0.69 8 102 1 95 95 0 0 411 Q6TH22 Protein DDI1 homolog 2 OS=Danio rerio GN=ddi2 PE=2 SV=1
80 : H2TXE5_TAKRU 0.49 0.64 8 102 1 95 95 0 0 415 H2TXE5 Uncharacterized protein OS=Takifugu rubripes GN=LOC101072643 PE=4 SV=1
81 : H2TXE6_TAKRU 0.49 0.64 8 102 1 95 95 0 0 401 H2TXE6 Uncharacterized protein OS=Takifugu rubripes GN=LOC101072643 PE=4 SV=1
82 : H2TXE7_TAKRU 0.49 0.64 8 102 1 95 95 0 0 415 H2TXE7 Uncharacterized protein OS=Takifugu rubripes GN=LOC101072643 PE=4 SV=1
83 : H2TXE8_TAKRU 0.49 0.64 8 102 1 95 95 0 0 416 H2TXE8 Uncharacterized protein OS=Takifugu rubripes GN=LOC101072643 PE=4 SV=1
84 : H3DB97_TETNG 0.49 0.65 8 102 1 95 95 0 0 416 H3DB97 Uncharacterized protein OS=Tetraodon nigroviridis PE=4 SV=1
85 : Q4RXA4_TETNG 0.49 0.65 8 102 1 95 95 0 0 419 Q4RXA4 Chromosome 11 SCAF14979, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00027496001 PE=4 SV=1
86 : J9HHW9_AEDAE 0.38 0.60 24 102 13 93 81 1 2 489 J9HHW9 AAEL017147-PA OS=Aedes aegypti GN=AaeL_AAEL017147 PE=4 SV=1
87 : J9HY95_AEDAE 0.38 0.60 24 102 13 93 81 1 2 631 J9HY95 AAEL017147-PB OS=Aedes aegypti GN=AaeL_AAEL017147 PE=4 SV=1
88 : K1PB10_CRAGI 0.37 0.63 19 101 8 90 83 0 0 453 K1PB10 DDI1-like protein 2 OS=Crassostrea gigas GN=CGI_10011744 PE=4 SV=1
89 : G6DPI8_DANPL 0.35 0.61 24 100 13 91 79 1 2 460 G6DPI8 DNA-damage inducible protein OS=Danaus plexippus GN=KGM_21580 PE=4 SV=1
90 : T1ISG3_STRMM 0.35 0.65 24 102 63 141 79 0 0 489 T1ISG3 Uncharacterized protein (Fragment) OS=Strigamia maritima PE=4 SV=1
91 : J3JVU4_DENPD 0.34 0.60 21 102 10 91 82 0 0 399 J3JVU4 Uncharacterized protein OS=Dendroctonus ponderosae PE=2 SV=1
92 : N6UAA4_DENPD 0.34 0.60 21 102 10 91 82 0 0 446 N6UAA4 Uncharacterized protein (Fragment) OS=Dendroctonus ponderosae GN=D910_04968 PE=4 SV=1
93 : U5EW96_9DIPT 0.32 0.63 24 102 14 94 81 1 2 485 U5EW96 Putative dna damage inducible protein OS=Corethrella appendiculata PE=2 SV=1
94 : W8AIM3_CERCA 0.31 0.54 21 100 10 92 83 2 3 469 W8AIM3 Protein DDI1-2 OS=Ceratitis capitata GN=DDI2 PE=2 SV=1
## ALIGNMENTS 1 - 70
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A G 0 0 139 1 0
2 2 A S + 0 0 125 1 0
3 3 A S - 0 0 140 1 0
4 4 A G - 0 0 67 1 0
5 5 A S S S+ 0 0 135 1 0
6 6 A S + 0 0 104 1 0
7 7 A G - 0 0 36 1 0
8 8 A M E -A 28 0A 8 86 0 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMM
9 9 A L E -A 27 0A 64 86 4 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLQLLLL
10 10 A I E -Ab 26 77A 0 86 30 IIVLIIVIIVIILIIIIVVIVVLLLILLLLLVLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLIILLVLLL
11 11 A T E -Ab 25 78A 37 86 2 TTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
12 12 A V E -Ab 24 79A 0 86 0 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
13 13 A Y E -Ab 23 80A 79 86 3 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYFYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYFYFFFF
14 14 A C E + b 0 81A 0 86 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
15 15 A V > + 0 0 50 86 37 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVLVLLLL
16 16 A R I >>> + 0 0 117 86 30 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
17 17 A R I 345S- 0 0 56 86 1 RRRKRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
18 18 A D I 345S- 0 0 138 86 0 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
19 19 A L I <45S+ 0 0 167 87 62 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLSLLLLLLLLLLLLLRSRRRR
20 20 A T I << - 0 0 91 87 34 TTSSSSSSSSSSSSSSSSSSSSSSTSTSSSSSSSSSSSSSSSSSSSSSSSTSSSSSSSSSSSSSSTSSSS
21 21 A E < - 0 0 104 90 5 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
22 22 A V - 0 0 44 90 68 VVVAVVVEVAVAAAVAAVVVAVAAAAAAVVVAVVVVVVVVVVVVVVVVVVMVVVVVVVVVVVIVLVLILL
23 23 A T E +A 13 0A 75 90 14 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
24 24 A F E -A 12 0A 18 95 0 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
25 25 A S E -A 11 0A 68 95 52 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSNSS
26 26 A L E -A 10 0A 15 95 1 LLLLLLLLLLLLLLLLLLLLVLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
27 27 A Q E +A 9 0A 156 95 30 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQEEQQQQQQ
28 28 A V E -A 8 0A 9 95 0 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
29 29 A N > - 0 0 63 95 59 NNSSSSSSSSSSRSSSSSSSSSRRSNSRDDDSDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
30 30 A P T 3 S+ 0 0 49 95 60 PPPPPPPPPPPPPPPPPSPPPSPPPPPPAAAPAAAAAAAAAAAAAAAAAARAAAAAAAAAAAGGARAAAA
31 31 A D T 3 S+ 0 0 141 95 13 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDEDDDD
32 32 A F < - 0 0 63 95 13 FFFFFFFFFFFFFFFFFLFFFLFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
33 33 A E B > -E 67 0B 95 95 14 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
34 34 A L H > S+ 0 0 0 95 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
35 35 A S H > S+ 0 0 46 95 67 SSHHRHHCRHRRHRRRCHRRRHHHYHYHHHHYHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEQYQQQQ
36 36 A N H > S+ 0 0 52 95 20 NNNNNNNNNDNNNNNNNNDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
37 37 A F H X S+ 0 0 0 95 0 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
38 38 A R H X S+ 0 0 14 95 55 RRRRKRRKKRKKRKKKRRRKRRRLRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
39 39 A V H X S+ 0 0 62 95 51 VVVVVVVVVVVVVVVVVAVVVAVVHLHVAAALAAAAAAAAAAAAAAAAAAVAAAAAAAAAAAAAAVAAAA
40 40 A L H >X S+ 0 0 55 95 3 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
41 41 A C H 3X>S+ 0 0 0 95 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
42 42 A E H 3<5S+ 0 0 65 95 27 EEEEEEEEEEEEEEEEEAEEEAEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAA
43 43 A L H <<5S+ 0 0 133 95 46 LLLLVLLLALAALAAALLTALLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLVLLLL
44 44 A E H <5S+ 0 0 117 95 0 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
45 45 A S T <5S- 0 0 12 95 12 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
46 46 A G < + 0 0 40 95 28 GGGGRGGRRGRRGRRRGGRRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
47 47 A V - 0 0 2 95 20 VVVIVIVVVVVVIVVVVIIVVIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIVV
48 48 A P > - 0 0 33 95 5 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
49 49 A A G > S+ 0 0 24 95 19 AAAAATVAAAVAAAAAVAAVAAAAVVVAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
50 50 A E G 3 S+ 0 0 183 95 65 EEEEDDEEENEEEEEEDEEEQEEEDDDEAAAAAAAAAAAAAAAAAAAAAADAAAAAAAAAAASSAGAASS
51 51 A E G < S+ 0 0 30 95 6 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEEEEEQQ
52 52 A A B < -F 83 0C 2 95 73 AATIITIIIIIITIIIITTIITTTIIITSSSTSSISSSSSSSSSSSSSSSTSSSSSSSSSSSTTSASSSS
53 53 A Q - 0 0 37 95 40 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQQQQQLLQQQQQQ
54 54 A I E -C 61 0A 0 95 6 IIIIIIIIIIIIIIIIIIFIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIILIIIIIIIII
55 55 A V E +CD 60 80A 31 95 59 VVIVIIIVIIIIVIIIFIIIVIVVLILVVVVFVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVII
56 56 A Y E > +C 59 0A 20 95 28 YYYYHYYYHHHHYHHHHYYHFYYYFFFYYYYFYYYYYYYYYYYYYYYYYYFYYYYYYYYYYYYYYFYYFF
57 57 A M T 3 S- 0 0 143 95 73 MMMMMMMMMMMMMMMMMMMTMMMMLMLMAAALAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGG
58 58 A E T 3 S+ 0 0 175 95 21 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
59 59 A Q E < S-C 56 0A 136 95 48 QQRRRRRRRQRRRRRRRRHRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRNRRRRRRRRRRRRRRSRRQQ
60 60 A L E -C 55 0A 65 95 64 LLLLLLLFLVLLLLLLILLLLLLLLLLLPPPLPPPPPPPPPPPPPPPPPPSPPPPPPPPPPPPPPPPPPP
61 61 A L E +C 54 0A 19 95 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
62 62 A T + 0 0 109 95 78 TTTGIASTIAIIVIIIAAAIAAVVATAVTTTATTTTTTTTTTTTTTTTTTETTTTTTTTTTTTTTETTTT
63 63 A D + 0 0 85 95 13 DDDDDDDDEDEENEEEDDDEDDNNDDDEDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDNDDDDDD
64 64 A D S S+ 0 0 83 95 56 DDDDDDDNDDDDDDDDDDDDDDDDDDDDNNNDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
65 65 A H S S+ 0 0 177 95 63 HHHHHHHHHHHHHHHHHHHHHHHHHRHHHHHRHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHQQNHHNHH
66 66 A C S S- 0 0 26 95 69 CCCYCCCCCSCCCCCCYCCCCCCCCCCCRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
67 67 A S B > -E 33 0B 28 95 37 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
68 68 A L H >>S+ 0 0 0 95 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
69 69 A G H 45S+ 0 0 27 95 52 GGGGGGGGGGGGGGGGGGGGGGGGGGGGAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
70 70 A S H 45S+ 0 0 82 95 50 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
71 71 A Y H <5S- 0 0 43 95 14 YYYYYYYYYYYYYYYYYYYYYYYYYYYFYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
72 72 A G T <5 + 0 0 32 95 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
73 73 A L < + 0 0 1 95 22 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
74 74 A K > - 0 0 145 95 13 KKKKKKKKKRKKKKKKKRKKKRKKRRRKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
75 75 A D T 3 S+ 0 0 113 95 3 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
76 76 A G T 3 S+ 0 0 55 95 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
77 77 A D E < -b 10 0A 43 95 0 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
78 78 A M E -b 11 0A 95 95 24 MMVVVVVVIVIVMVIVVMVIVMMMVVVMVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
79 79 A V E -b 12 0A 1 95 6 VVVVVVVVVVVVVVVVVVIVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
80 80 A V E -bD 13 55A 41 95 21 VVVVVVVVVVVVIVVVVVVVVVIIVVVIIIIVIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
81 81 A L E -b 14 0A 0 95 2 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
82 82 A L - 0 0 48 94 77 LLLLLLLLLLLLLLLLLLLLLLLLLLLLRRRLRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRQQ
83 83 A Q B -F 52 0C 38 95 18 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
84 84 A K - 0 0 100 95 65 KKKKRKKRKKKKKKKKKKKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKLKKVV
85 85 A D + 0 0 107 95 48 DDEEDEEDDEDDEDDDDDEDDDEEEEEEEEEEEEEEEEEEEEEEEEEEEEAEEEEEEEEEEEEEDQEEEE
86 86 A N + 0 0 108 95 71 NNNNNNNNNSNNANYNNSNNSSAAASAANNNGNNNNNNNNNNNNNNNNNNNSNNTNNNNNNNATTNNTNN
87 87 A V - 0 0 107 94 83 VVVVVVVVV VVMVVVVVVVAVMMVAVVAAAAAAAAAAAAAAAAAAAAAAEAAAAAAAAAAAPPVVAVGG
88 88 A G - 0 0 66 92 69 GGGGGEGGG GGRGGGGGGGGGRRGGGRDDDADDDEDDDDDDDDDDDDDDRDDDDDDDDDDDEEEE.EQQ
89 89 A L + 0 0 128 92 48 LPPSPSPSP PPPPPPSPPPHPPPPPPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPTAPP.PAA
90 90 A R S S- 0 0 214 93 63 RRWRRRRRR RRRRRRRRRRRRRRWRWCRRRRRRRRRRRRRRRRRRRRRRGRRRRRRRRRRRRRRG.RLL
91 91 A T S S- 0 0 124 94 62 TPHAAPPPA AASAAAPTLAPTSSPPPSPPPPPPPPPPPPPPPPPPPPPPSPPPPPPPPPPPPPPAEPSS
92 92 A P - 0 0 125 94 65 PPPPPPSPP PPPPPPVGPPPGPPPHPPPPPPPPPSPPPPPPPPPPPPSSPPPPPSSSSAASAASSPSPP
93 93 A G + 0 0 76 94 82 GGGGNGAGG GGEGGGGRGGGREERGREVVVGVVVVVVVVVVVVVVVVVVGVVVVVVVVVVVAAIDVMAA
94 94 A R + 0 0 216 92 71 RRRRQRRQR RRRRRRRRRRRRRRRRRRQQQXQQQQQQQQQQQQQHQQQQQQQQQQQQQQQQPPREQRPP
95 95 A T - 0 0 123 92 90 TATT TTTA AAAAAATTTATPAATTTVFFFGFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
96 96 A P - 0 0 98 92 45 PPSS PSPP PPAPPPPSPPSSAASSSAPPPSPPPPPPPPPPPPPPPPPPTPSSPPPPPSPSPPPTPPPP
97 97 A S + 0 0 121 90 58 NNSS DSNN NNGNNNNSNNTSGGSSSG SGNNNSNNNNNNNNNNNNNNGNNNNNNNNNNNGGAGGGGG
98 98 A G + 0 0 60 85 51 HHLL QLQQ QQ QQQQRQQQRLLLLLL LLLLLLLLLLLLLLLLLL LLLLLLLLLLLLLLILLLL
99 99 A P + 0 0 129 82 22 PPPP PPSP PP PPPPPPPPPCCPLPC PPPPPPPPPPPPPPPPPP PPPPPPPPPPP P PPPP
100 100 A S S S+ 0 0 108 82 58 RRRQ RQRR RR RRRRGRRRGSSQQQR RRRRRRRRRRRRRRRRRR RRRRRRRRRRR R RRRR
101 101 A S 0 0 122 80 32 ATIR IIVI VI IIIVVTVMVMMLVLM IIIIIIIIIIIIIIIIII IIIIIIIIIII I IIII
102 102 A G 0 0 134 79 4 DDDD DDDD DD DDDDDDDDDEEDDDE DDDDDDDDDDDDDDDDDD DDDDDDDDDDD D DDDD
## ALIGNMENTS 71 - 94
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....8....:....9....:....0....:....1....:....2....:....3....:....4
1 1 A G 0 0 139 1 0
2 2 A S + 0 0 125 1 0
3 3 A S - 0 0 140 1 0
4 4 A G - 0 0 67 1 0
5 5 A S S S+ 0 0 135 1 0
6 6 A S + 0 0 104 1 0
7 7 A G - 0 0 36 1 0
8 8 A M E -A 28 0A 8 86 0 MMMMMMMMMMMMMMM
9 9 A L E -A 27 0A 64 86 4 LFLLLMLLLLLLLLL
10 10 A I E -Ab 26 77A 0 86 30 VLVVLLVVLVVVVVV
11 11 A T E -Ab 25 78A 37 86 2 TTTTTTTTTTTTTTT
12 12 A V E -Ab 24 79A 0 86 0 VVVVVVVVVVVVVVV
13 13 A Y E -Ab 23 80A 79 86 3 YYFFFYFFFFFFFFF
14 14 A C E + b 0 81A 0 86 0 CCCCCCCCCCCCCCC
15 15 A V > + 0 0 50 86 37 VVAAAVAAAAAAAAA
16 16 A R I >>> + 0 0 117 86 30 RRPPPRPPPPPPPPP
17 17 A R I 345S- 0 0 56 86 1 RRRRRRRRRRRRRRR
18 18 A D I 345S- 0 0 138 86 0 DDDDDDDDDDDDDDD
19 19 A L I <45S+ 0 0 167 87 62 LLHRRRRRRRRRRRR L
20 20 A T I << - 0 0 91 87 34 SSPPSSPPSPPPPPP S
21 21 A E < - 0 0 104 90 5 EEEEEEEEEEEEEEE D DD D
22 22 A V - 0 0 44 90 68 ILTTTISTTTTTTTT Q FF G
23 23 A T E +A 13 0A 75 90 14 TTTTTTTTTTTTTTT I II V
24 24 A F E -A 12 0A 18 95 0 FFFFFFFFFFFFFFFFFFFFFFFF
25 25 A S E -A 11 0A 68 95 52 STAAASAAAVVVVDDPPSVIVVAF
26 26 A L E -A 10 0A 15 95 1 LLLLLLLLLLLLLLLLLLLLLLLL
27 27 A Q E +A 9 0A 156 95 30 EQDDEQEDDDDDDHHEEDDDDDED
28 28 A V E -A 8 0A 9 95 0 VVVVVVVVVVVVVVVVVVVVVVVV
29 29 A N > - 0 0 63 95 59 DDSSSSSSSSSSSSSSSSSSSSPN
30 30 A P T 3 S+ 0 0 49 95 60 AGPPPAPPPPPPPPPDDEEEEEEE
31 31 A D T 3 S+ 0 0 141 95 13 DGEEEEEEEDDDDDDDDDDDEEHE
32 32 A F < - 0 0 63 95 13 FLLLLLLLLLLLLLLMMLLLLLLL
33 33 A E B > -E 67 0B 95 95 14 EEEEEEEEEKKKKVVEEEEEEEEE
34 34 A L H > S+ 0 0 0 95 0 LLLLLLLLLLLLLLLLLLLLLLLL
35 35 A S H > S+ 0 0 46 95 67 QERRRRRRRRRRRRREEEEEEEEE
36 36 A N H > S+ 0 0 52 95 20 NTDDDDDDDDDDDDDNNNNNNNNN
37 37 A F H X S+ 0 0 0 95 0 FLFFFFFFFFFFFFFFFFFFFFFF
38 38 A R H X S+ 0 0 14 95 55 KRIVVVVVLVVVVVVKKKKKKKKR
39 39 A V H X S+ 0 0 62 95 51 AAAAAAAAAGGGGVVAAAAAAAAA
40 40 A L H >X S+ 0 0 55 95 3 LLLLLLLLLLLLLLLLLLFFFFLF
41 41 A C H 3X>S+ 0 0 0 95 0 CCCCCCCCCCCCCCCCCCCCCCCC
42 42 A E H 3<5S+ 0 0 65 95 27 EEEEEEEEEVVVVVVEEEEEEEEK
43 43 A L H <<5S+ 0 0 133 95 46 MLLLLLLLLPPPPTTIIYIIIIMM
44 44 A E H <5S+ 0 0 117 95 0 EEEEEEEEEEEEEEEEEEEEEEEE
45 45 A S T <5S- 0 0 12 95 12 SSSSSSSSSSSSSSSSSISYSSSM
46 46 A G < + 0 0 40 95 28 GGGGGEGGGGGGGGGGGGGGGGGE
47 47 A V - 0 0 2 95 20 IVIIIIIIIIIIIIIFFIFIFFIL
48 48 A P > - 0 0 33 95 5 PPPPPPPPPPPPPPPPPSPPPPPg
49 49 A A G > S+ 0 0 24 95 19 AAAAAAAAAAAAAAAAAAAAAASq
50 50 A E G 3 S+ 0 0 183 95 65 AAGGGAGGGDDDDDDSSSSRSSAT
51 51 A E G < S+ 0 0 30 95 6 EEEEEEEEEEEEEEEEEEDEEEEN
52 52 A A B < -F 83 0C 2 95 73 SSIIIIIIIIIIIIIIIIILIIMV
53 53 A Q - 0 0 37 95 40 QQQQLQQQQQQQQQQVVATIVVIV
54 54 A I E -C 61 0A 0 95 6 IIIIIIIIIIIIIIIIIILLIIVI
55 55 A V E +CD 60 80A 31 95 59 VLTTSTTTITTTTTTSSLTHAAAL
56 56 A Y E > +C 59 0A 20 95 28 YFIYYHYYYYYYYYYFFWFHFFIF
57 57 A M T 3 S- 0 0 143 95 73 AAAVAAVVAAAAAAANNNNENNDN
58 58 A E T 3 S+ 0 0 175 95 21 EEEEEEEEEEEEEDDGGGGGGGGG
59 59 A Q E < S-C 56 0A 136 95 48 THQQQQQQQQQQQQQQQRKRMMRS
60 60 A L E -C 55 0A 65 95 64 PVTPPPPPPPPPPPPPPPPPPPPP
61 61 A L E +C 54 0A 19 95 0 LLLLLLLLLLLLLLLLLLMLLLML
62 62 A T + 0 0 109 95 78 TTKKRGKKQKKKKKKLLHMLMMLT
63 63 A D + 0 0 85 95 13 DDDDDDDDDDDDDDDDDDHEDDDD
64 64 A D S S+ 0 0 83 95 56 SNHPLLPLPPPPPPPDDDDDNNND
65 65 A H S S+ 0 0 177 95 63 RRTTTATTTTTTTTTKKKKTKKKK
66 66 A C S S- 0 0 26 95 69 RRRRRRRRRRRRRRRKKRKRKKKK
67 67 A S B > -E 33 0B 28 95 37 STAAATAAAAAAAAATTTSSSSAQ
68 68 A L H >>S+ 0 0 0 95 0 LLLLLLLLLLLLLLLLLLLLLLLL
69 69 A G H 45S+ 0 0 27 95 52 AEGGGGGGGGGGGGGTTVKKKKSK
70 70 A S H 45S+ 0 0 82 95 50 SATTNSNTNTTTTTTQQSEYDDQD
71 71 A Y H <5S- 0 0 43 95 14 YYYYYYYYYYYYYYYLLYLYLLFY
72 72 A G T <5 + 0 0 32 95 0 GGGGGGGGGGGGGGGGGGGGGGGG
73 73 A L < + 0 0 1 95 22 LLLVLLVVLVVVVVVIIIVIIIII
74 74 A K > - 0 0 145 95 13 RKKKKKKKKKKKKKKKKKHKRRKK
75 75 A D T 3 S+ 0 0 113 95 3 DDDDDDDDDDDDDDDDDNDEDDDD
76 76 A G T 3 S+ 0 0 55 95 0 GGGGGGGGGGGGGGGGGGGGGGGG
77 77 A D E < -b 10 0A 43 95 0 DDDDDDDDDDDDDDDDDDDDDDDD
78 78 A M E -b 11 0A 95 95 24 VVVVVVVVVVVVVVVVVMVVAAVC
79 79 A V E -b 12 0A 1 95 6 VVVVLVVVLVVVVVVVVLIVVVIV
80 80 A V E -bD 13 55A 41 95 21 IVVVVVVVVVVVVVVMMLVLIIII
81 81 A L E -b 14 0A 0 95 2 LLLLLLLLLLLLLLLLLLLMLLLV
82 82 A L - 0 0 48 94 77 RRRRR.RRRRRRRRRQQQLQQQQQ
83 83 A Q B -F 52 0C 38 95 18 QQQQQRQQQQQQQQQHHHHHHHHN
84 84 A K - 0 0 100 95 65 LLAAAQAAATTTTTTIIMMMMMMV
85 85 A D + 0 0 107 95 48 EDDDDADDEDDDDDDMMRVQLLAP
86 86 A N + 0 0 108 95 71 RRRRRERRRRRRRRRQQGQSSSQM
87 87 A V - 0 0 107 94 83 SPRRRRRRLRRRRRRaaPsSGGsr
88 88 A G - 0 0 66 92 69 .QPPPRPPRPPPPPPqqSnDSSqg
89 89 A L + 0 0 128 92 48 .VPPPPPPAPPPPLLAAQLHQQPG
90 90 A R S S- 0 0 214 93 63 QQPQPPPAPPPPPPPSSANQTTRS
91 91 A T S S- 0 0 124 94 62 STTTAVTAPTTTTPPQQPMSNNPP
92 92 A P - 0 0 125 94 65 QGQQAQLQQQQQQQQAANNTIIPA
93 93 A G + 0 0 76 94 82 SLPPAPPPPPPPPPPAASDTDDPA
94 94 A R + 0 0 216 92 71 QQAA ASSTAAAAAAQQPASQQAG
95 95 A T - 0 0 123 92 90 FLFF FLFVFFFFFFPPQSSNNQG
96 96 A P - 0 0 98 92 45 PPPP PSPPPPPPPPSSQQTSSSQ
97 97 A S + 0 0 121 90 58 GGGG GGGGGGGGGGRRPASSSAN
98 98 A G + 0 0 60 85 51 L LL LLLLLLLLLLLLALLVVLA
99 99 A P + 0 0 129 82 22 P PP PPPPPPPPPPAAPPPSSPP
100 100 A S S S+ 0 0 108 82 58 L HR RRRRHHHHRRSSASSSSNP
101 101 A S 0 0 122 80 32 I II IIIIIIIIIILLI IFFL
102 102 A G 0 0 134 79 4 D DD DDDDDDDDDDDD DDDD
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
2 2 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
3 3 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
4 4 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
5 5 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
6 6 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
7 7 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
8 8 A 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 86 0 0 0.000 0 1.00
9 9 A 0 97 0 1 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 86 0 0 0.190 6 0.96
10 10 A 23 57 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 86 0 0 0.980 32 0.69
11 11 A 0 0 0 0 0 0 0 0 0 0 0 99 0 0 0 0 0 0 1 0 86 0 0 0.063 2 0.98
12 12 A 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 86 0 0 0.000 0 1.00
13 13 A 0 0 0 0 21 0 79 0 0 0 0 0 0 0 0 0 0 0 0 0 86 0 0 0.513 17 0.97
14 14 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 86 0 0 0.000 0 1.00
15 15 A 80 6 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 86 0 0 0.617 20 0.62
16 16 A 0 0 0 0 0 0 0 0 0 14 0 0 0 0 86 0 0 0 0 0 86 0 0 0.404 13 0.69
17 17 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 99 1 0 0 0 0 86 0 0 0.063 2 0.99
18 18 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 86 0 0 0.000 0 1.00
19 19 A 0 77 0 0 0 0 0 0 0 0 2 0 0 1 20 0 0 0 0 0 87 0 0 0.658 21 0.38
20 20 A 0 0 0 0 0 0 0 0 0 11 80 8 0 0 0 0 0 0 0 0 87 0 0 0.626 20 0.66
21 21 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 96 0 4 90 0 0 0.182 6 0.94
22 22 A 53 6 4 1 2 0 0 1 17 0 1 12 0 0 0 0 1 1 0 0 90 0 0 1.524 50 0.31
23 23 A 1 0 3 0 0 0 0 0 0 0 0 96 0 0 0 0 0 0 0 0 90 0 0 0.207 6 0.85
24 24 A 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 95 0 0 0.000 0 1.00
25 25 A 7 0 1 0 1 0 0 0 7 2 77 1 0 0 0 0 0 0 1 2 95 0 0 0.941 31 0.48
26 26 A 1 99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 95 0 0 0.058 1 0.99
27 27 A 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 75 8 0 15 95 0 0 0.789 26 0.69
28 28 A 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 95 0 0 0.000 0 1.00
29 29 A 0 0 0 0 0 0 0 0 0 1 44 0 0 0 4 0 0 0 5 45 95 0 0 1.056 35 0.40
30 30 A 0 0 0 0 0 0 0 3 41 42 2 0 0 0 2 0 0 7 0 2 95 0 0 1.275 42 0.40
31 31 A 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 12 0 86 95 0 0 0.473 15 0.87
32 32 A 0 24 0 2 74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 95 0 0 0.650 21 0.86
33 33 A 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 94 0 0 95 0 0 0.276 9 0.85
34 34 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 95 0 0 0.000 0 1.00
35 35 A 0 0 0 0 0 0 4 0 0 0 3 0 2 47 24 0 6 13 0 0 95 0 0 1.457 48 0.33
36 36 A 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 83 16 95 0 0 0.493 16 0.79
37 37 A 0 1 0 0 99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 95 0 0 0.058 1 0.99
38 38 A 12 2 1 0 0 0 0 0 0 0 0 0 0 0 66 19 0 0 0 0 95 0 0 0.966 32 0.44
39 39 A 29 2 0 0 0 0 0 4 62 0 0 0 0 2 0 0 0 0 0 0 95 0 0 0.952 31 0.49
40 40 A 0 95 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 95 0 0 0.206 6 0.96
41 41 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 95 0 0 0.000 0 1.00
42 42 A 6 0 0 0 0 0 0 0 4 0 0 0 0 0 0 1 0 88 0 0 95 0 0 0.465 15 0.73
43 43 A 2 73 6 3 0 0 1 0 7 4 0 3 0 0 0 0 0 0 0 0 95 0 0 1.080 36 0.53
44 44 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 95 0 0 0.000 0 1.00
45 45 A 0 0 1 1 0 0 1 0 0 0 97 0 0 0 0 0 0 0 0 0 95 0 0 0.175 5 0.87
46 46 A 0 0 0 0 0 0 0 87 0 0 0 0 0 0 11 0 0 2 0 0 95 0 0 0.436 14 0.72
47 47 A 21 1 73 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 95 0 0 0.763 25 0.79
48 48 A 0 0 0 0 0 0 0 1 0 98 1 0 0 0 0 0 0 0 0 0 95 0 1 0.117 3 0.94
49 49 A 7 0 0 0 0 0 0 0 89 0 1 1 0 0 0 0 1 0 0 0 95 0 0 0.435 14 0.80
50 50 A 0 0 0 0 0 0 0 7 42 0 11 1 0 0 1 0 1 22 1 14 95 0 0 1.591 53 0.35
51 51 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 95 1 2 95 0 0 0.262 8 0.93
52 52 A 1 1 39 1 0 0 0 0 4 0 40 14 0 0 0 0 0 0 0 0 95 0 0 1.283 42 0.27
53 53 A 5 3 2 0 0 0 0 0 1 0 0 1 0 1 0 0 86 0 0 0 95 0 0 0.616 20 0.60
54 54 A 1 3 95 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 95 0 0 0.256 8 0.94
55 55 A 53 5 20 0 2 0 0 0 3 0 3 13 0 1 0 0 0 0 0 0 95 0 0 1.423 47 0.40
56 56 A 0 0 2 0 17 1 67 0 0 0 0 0 0 13 0 0 0 0 0 0 95 0 0 0.957 31 0.71
57 57 A 3 3 0 27 0 0 0 2 54 0 0 1 0 0 0 0 0 1 7 1 95 0 0 1.324 44 0.26
58 58 A 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 88 0 2 95 0 0 0.413 13 0.78
59 59 A 0 0 0 2 0 0 0 0 0 0 2 1 0 2 68 1 22 0 1 0 95 0 0 0.981 32 0.52
60 60 A 2 28 1 0 1 0 0 0 0 65 1 1 0 0 0 0 0 0 0 0 95 0 0 0.909 30 0.36
61 61 A 0 98 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 95 0 0 0.102 3 0.99
62 62 A 4 4 8 3 0 0 0 2 11 0 1 51 0 1 1 11 1 2 0 0 95 0 0 1.757 58 0.21
63 63 A 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 9 4 85 95 0 0 0.541 18 0.87
64 64 A 0 3 0 0 0 0 0 0 0 9 1 0 0 1 0 0 0 0 48 37 95 0 0 1.147 38 0.43
65 65 A 0 0 0 0 0 0 0 0 1 0 0 14 0 68 4 8 2 0 2 0 95 0 0 1.084 36 0.36
66 66 A 0 0 0 0 0 0 2 0 0 0 1 0 27 0 62 7 0 0 0 0 95 0 0 0.972 32 0.31
67 67 A 0 0 0 0 0 0 0 0 14 0 80 5 0 0 0 0 1 0 0 0 95 0 0 0.654 21 0.62
68 68 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 95 0 0 0.000 0 1.00
69 69 A 1 0 0 0 0 0 0 45 44 0 1 2 0 0 0 5 0 1 0 0 95 0 0 1.100 36 0.48
70 70 A 0 0 0 0 0 0 1 0 1 0 78 9 0 0 0 0 3 1 3 3 95 0 0 0.889 29 0.50
71 71 A 0 5 0 0 2 0 93 0 0 0 0 0 0 0 0 0 0 0 0 0 95 0 0 0.307 10 0.86
72 72 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 95 0 0 0.000 0 1.00
73 73 A 11 81 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 95 0 0 0.616 20 0.77
74 74 A 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 88 0 0 0 0 95 0 0 0.394 13 0.86
75 75 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 98 95 0 0 0.117 3 0.97
76 76 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 95 0 0 0.000 0 1.00
77 77 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 95 0 0 0.000 0 1.00
78 78 A 82 0 4 11 0 0 0 0 2 0 0 0 1 0 0 0 0 0 0 0 95 0 0 0.661 22 0.76
79 79 A 94 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 95 0 0 0.279 9 0.94
80 80 A 43 2 53 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 95 0 0 0.863 28 0.79
81 81 A 1 98 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 95 1 0 0.117 3 0.98
82 82 A 0 33 0 0 0 0 0 0 0 0 0 0 0 0 56 0 11 0 0 0 94 0 0 0.927 30 0.22
83 83 A 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 89 0 1 0 95 0 0 0.404 13 0.81
84 84 A 3 3 2 6 0 0 0 0 6 0 0 6 0 0 4 67 1 0 0 0 95 0 0 1.270 42 0.34
85 85 A 1 2 0 2 0 0 0 0 3 1 0 0 0 0 1 0 2 57 0 31 95 0 0 1.180 39 0.52
86 86 A 0 0 0 1 0 0 1 2 7 0 9 4 0 0 15 0 4 1 55 0 95 0 0 1.519 50 0.28
87 87 A 28 1 0 3 0 0 0 4 40 4 4 0 0 0 14 0 0 1 0 0 94 2 5 1.605 53 0.16
88 88 A 0 0 0 0 0 0 0 26 1 12 3 0 0 0 8 0 7 8 1 35 92 0 0 1.752 58 0.31
89 89 A 1 5 0 0 0 0 0 1 8 74 4 1 0 2 0 0 3 0 0 0 92 0 0 1.056 35 0.51
90 90 A 0 2 0 0 0 3 0 2 2 12 3 2 1 0 67 0 4 0 1 0 93 0 0 1.307 43 0.37
91 91 A 1 1 0 1 0 0 0 0 13 55 10 13 0 1 0 0 2 1 2 0 94 0 0 1.483 49 0.38
92 92 A 1 1 2 0 0 0 0 3 9 54 13 1 0 1 0 0 13 0 2 0 94 0 0 1.534 51 0.35
93 93 A 35 1 1 1 0 0 0 21 10 14 2 1 0 0 4 0 0 4 1 4 94 0 0 1.922 64 0.18
94 94 A 0 0 0 0 0 0 0 1 12 5 3 1 0 1 30 0 45 1 0 0 92 0 0 1.443 48 0.28
95 95 A 2 2 0 0 57 0 0 2 12 3 2 15 0 0 0 0 2 0 2 0 92 0 0 1.474 49 0.10
96 96 A 0 0 0 0 0 0 0 0 4 67 22 3 0 0 0 0 3 0 0 0 92 0 0 0.957 31 0.55
97 97 A 0 0 0 0 0 0 0 30 3 1 16 1 0 0 2 0 0 0 46 1 90 0 0 1.357 45 0.41
98 98 A 2 74 1 0 0 0 0 1 2 0 0 0 0 2 2 0 14 0 0 0 85 0 0 0.956 31 0.49
99 99 A 0 1 0 0 0 0 0 0 2 89 4 0 4 0 0 0 0 0 0 0 82 0 0 0.490 16 0.78
100 100 A 0 1 0 0 0 0 0 2 1 1 11 0 0 6 70 0 6 0 1 0 82 0 0 1.142 38 0.42
101 101 A 9 6 71 5 3 0 0 0 1 0 1 3 0 0 1 0 0 0 0 0 80 0 0 1.127 37 0.67
102 102 A 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 4 0 95 79 0 0 0.229 7 0.96
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
86 65 77 2 aAQq
87 65 77 2 aAQq
89 65 77 2 sSSn
93 65 78 2 sLGq
94 29 38 1 gLq
94 68 78 2 rSGg
//