Complet list of 1v1c hssp file
Complete list of 1v1c.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1V1C
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-11
HEADER SH3-DOMAIN 14-APR-04 1V1C
COMPND MOL_ID: 1; MOLECULE: OBSCURIN; CHAIN: A; FRAGMENT: SH3 DOMAIN RESIDUES
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: HOMO SAPIENS; ORGANISM_COMMON: HUMAN;
AUTHOR M.PFUHL,M.GAUTEL
DBREF 1V1C A -2 0 PDB 1V1C 1V1C -2 0
DBREF 1V1C A 1 68 UNP Q96AA2 Q96AA2 5601 5668
SEQLENGTH 68
NCHAIN 1 chain(s) in 1V1C data set
NALIGN 48
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : A6NGQ3_HUMAN 1.00 1.00 1 68 3235 3302 68 0 0 5602 A6NGQ3 Obscurin OS=Homo sapiens GN=OBSCN PE=2 SV=3
2 : F8W8T3_HUMAN 1.00 1.00 1 68 2720 2787 68 0 0 3739 F8W8T3 Obscurin OS=Homo sapiens GN=OBSCN PE=2 SV=1
3 : H0Y411_HUMAN 1.00 1.00 1 68 217 284 68 0 0 2583 H0Y411 Obscurin (Fragment) OS=Homo sapiens GN=OBSCN PE=4 SV=1
4 : F7CQP1_MACMU 0.99 1.00 1 68 5601 5668 68 0 0 6629 F7CQP1 Uncharacterized protein OS=Macaca mulatta PE=4 SV=1
5 : F7CVE8_MACMU 0.99 1.00 1 68 2599 2666 68 0 0 3618 F7CVE8 Uncharacterized protein (Fragment) OS=Macaca mulatta PE=4 SV=1
6 : F7C4M0_CALJA 0.97 1.00 1 68 5615 5682 68 0 0 6083 F7C4M0 Uncharacterized protein OS=Callithrix jacchus GN=OBSCN PE=4 SV=1
7 : G1RVU9_NOMLE 0.97 0.99 1 68 3118 3185 68 0 0 5156 G1RVU9 Uncharacterized protein (Fragment) OS=Nomascus leucogenys PE=4 SV=1
8 : L5JXJ3_PTEAL 0.97 1.00 1 68 880 947 68 0 0 1101 L5JXJ3 Obscurin OS=Pteropus alecto GN=PAL_GLEAN10017027 PE=4 SV=1
9 : M3X035_FELCA 0.97 1.00 1 68 85 152 68 0 0 1054 M3X035 Uncharacterized protein OS=Felis catus PE=4 SV=1
10 : D2I4T8_AILME 0.96 1.00 1 68 555 622 68 0 0 3493 D2I4T8 Putative uncharacterized protein OS=Ailuropoda melanoleuca GN=PANDA_020642 PE=4 SV=1
11 : E2RLJ0_CANFA 0.96 1.00 1 68 5065 5132 68 0 0 5738 E2RLJ0 Uncharacterized protein OS=Canis familiaris PE=4 SV=2
12 : E9PU99_MOUSE 0.96 0.99 1 68 3541 3608 68 0 0 4167 E9PU99 Obscurin OS=Mus musculus GN=Obscn PE=2 SV=2
13 : F1LM20_RAT 0.96 0.99 1 68 3218 3285 68 0 0 4231 F1LM20 Uncharacterized protein (Fragment) OS=Rattus norvegicus PE=4 SV=2
14 : F1M8C9_RAT 0.96 0.99 1 68 2774 2841 68 0 0 4976 F1M8C9 Uncharacterized protein (Fragment) OS=Rattus norvegicus PE=4 SV=2
15 : F6TJX7_MOUSE 0.96 0.99 1 68 217 284 68 0 0 2553 F6TJX7 Obscurin (Fragment) OS=Mus musculus GN=Obscn PE=4 SV=1
16 : G1M700_AILME 0.96 1.00 1 68 75 142 68 0 0 1045 G1M700 Uncharacterized protein (Fragment) OS=Ailuropoda melanoleuca PE=4 SV=1
17 : S7P9V2_MYOBR 0.96 1.00 1 68 96 163 68 0 0 440 S7P9V2 Obscurin OS=Myotis brandtii GN=D623_10016128 PE=4 SV=1
18 : S9XGK0_9CETA 0.96 0.99 1 68 5007 5074 68 0 0 5663 S9XGK0 Uncharacterized protein OS=Camelus ferus GN=CB1_000086001 PE=4 SV=1
19 : U6DVM2_NEOVI 0.94 0.99 1 68 132 199 68 0 0 271 U6DVM2 Obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF (Fragment) OS=Neovison vison GN=F8W8T3 PE=2 SV=1
20 : L8IMB3_9CETA 0.93 0.99 1 68 3234 3301 68 0 0 5584 L8IMB3 Obscurin (Fragment) OS=Bos mutus GN=M91_05547 PE=4 SV=1
21 : F6TWE8_MONDO 0.88 0.99 1 68 5612 5679 68 0 0 6626 F6TWE8 Uncharacterized protein OS=Monodelphis domestica GN=OBSCN PE=4 SV=1
22 : E7EYG1_DANRE 0.82 0.96 1 68 5545 5612 68 0 0 6143 E7EYG1 Uncharacterized protein OS=Danio rerio GN=CR792456.1 PE=4 SV=1
23 : F1QNQ6_DANRE 0.82 0.96 1 68 120 187 68 0 0 733 F1QNQ6 Uncharacterized protein (Fragment) OS=Danio rerio PE=4 SV=1
24 : H3AL21_LATCH 0.81 0.99 1 68 75 142 68 0 0 1087 H3AL21 Uncharacterized protein (Fragment) OS=Latimeria chalumnae PE=4 SV=1
25 : Q58EP4_DANRE 0.79 0.94 1 68 120 187 68 0 0 1095 Q58EP4 LOC572412 protein (Fragment) OS=Danio rerio GN=LOC572412 PE=2 SV=1
26 : W5MRZ5_LEPOC 0.78 0.96 1 68 1 68 68 0 0 2105 W5MRZ5 Uncharacterized protein OS=Lepisosteus oculatus PE=4 SV=1
27 : V8N7D5_OPHHA 0.77 0.93 1 56 785 840 56 0 0 913 V8N7D5 Uncharacterized protein OS=Ophiophagus hannah GN=L345_16075 PE=4 SV=1
28 : G3PZP0_GASAC 0.76 0.92 3 68 5379 5444 66 0 0 5971 G3PZP0 Uncharacterized protein OS=Gasterosteus aculeatus GN=OBSCN PE=4 SV=1
29 : G3PZP4_GASAC 0.76 0.92 3 68 125 190 66 0 0 1093 G3PZP4 Uncharacterized protein (Fragment) OS=Gasterosteus aculeatus GN=OBSCN PE=4 SV=1
30 : H2MT88_ORYLA 0.76 0.93 1 68 5556 5623 68 0 0 6162 H2MT88 Uncharacterized protein OS=Oryzias latipes PE=4 SV=1
31 : H3CSU3_TETNG 0.75 0.93 1 68 119 186 68 0 0 1103 H3CSU3 Uncharacterized protein (Fragment) OS=Tetraodon nigroviridis PE=4 SV=1
32 : H3CSU5_TETNG 0.75 0.93 1 68 125 192 68 0 0 1106 H3CSU5 Uncharacterized protein (Fragment) OS=Tetraodon nigroviridis PE=4 SV=1
33 : M3ZU72_XIPMA 0.75 0.93 1 68 5510 5577 68 0 0 6116 M3ZU72 Uncharacterized protein OS=Xiphophorus maculatus GN=OBSCN PE=4 SV=1
34 : Q4SLN8_TETNG 0.75 0.93 1 68 1799 1866 68 0 0 2646 Q4SLN8 Chromosome 15 SCAF14556, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00016153001 PE=4 SV=1
35 : H2UJB6_TAKRU 0.74 0.93 1 68 125 192 68 0 0 1106 H2UJB6 Uncharacterized protein (Fragment) OS=Takifugu rubripes PE=4 SV=1
36 : V4AVZ2_LOTGI 0.53 0.82 2 63 1 62 62 0 0 62 V4AVZ2 Uncharacterized protein (Fragment) OS=Lottia gigantea GN=LOTGIDRAFT_60463 PE=4 SV=1
37 : H2Y283_CIOIN 0.44 0.62 3 66 194 257 64 0 0 308 H2Y283 Uncharacterized protein OS=Ciona intestinalis PE=4 SV=1
38 : T1K4T7_TETUR 0.42 0.58 4 55 318 369 52 0 0 4237 T1K4T7 Uncharacterized protein OS=Tetranychus urticae PE=4 SV=1
39 : E3MGG0_CAERE 0.41 0.67 2 52 65 115 51 0 0 465 E3MGG0 Putative uncharacterized protein OS=Caenorhabditis remanei GN=CRE_24009 PE=4 SV=1
40 : K7H782_CAEJA 0.41 0.67 2 52 65 115 51 0 0 459 K7H782 Uncharacterized protein OS=Caenorhabditis japonica GN=WBGene00134783 PE=4 SV=1
41 : K7H783_CAEJA 0.41 0.67 2 52 54 104 51 0 0 448 K7H783 Uncharacterized protein OS=Caenorhabditis japonica GN=WBGene00134783 PE=4 SV=1
42 : A8XEH5_CAEBR 0.40 0.67 2 53 65 116 52 0 0 6561 A8XEH5 Protein CBR-UNC-89 (Fragment) OS=Caenorhabditis briggsae GN=unc-89 PE=4 SV=1
43 : U6NRR5_HAECO 0.39 0.68 2 63 25 83 62 1 3 116 U6NRR5 Variant SH3 domain containing protein OS=Haemonchus contortus GN=HCOI_00474500 PE=4 SV=1
44 : W6NHA3_HAECO 0.39 0.68 2 63 7 65 62 1 3 98 W6NHA3 Variant SH3 domain containing protein (Fragment) OS=Haemonchus contortus GN=HCOI_00809900 PE=4 SV=1
45 : E1FJE6_LOALO 0.37 0.69 2 52 67 117 51 0 0 471 E1FJE6 Uncharacterized protein OS=Loa loa GN=LOAG_01020 PE=4 SV=2
46 : J9E678_WUCBA 0.37 0.65 2 64 67 126 63 1 3 295 J9E678 Uncharacterized protein (Fragment) OS=Wuchereria bancrofti GN=WUBG_11291 PE=4 SV=1
47 : A8P6H6_BRUMA 0.35 0.69 2 63 67 125 62 1 3 269 A8P6H6 Muscle M-line assembly protein unc-89, putative (Fragment) OS=Brugia malayi GN=Bm1_17625 PE=4 SV=1
48 : W2TQ89_NECAM 0.34 0.61 2 63 82 140 62 1 3 309 W2TQ89 Variant SH3 domain protein OS=Necator americanus GN=NECAME_07121 PE=4 SV=1
## ALIGNMENTS 1 - 48
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A I 0 0 182 34 40 IIIIIIIIIIIIIIIIIIIIIMMIMMI MMMMMM
2 2 A F - 0 0 86 45 8 FFFFFFFFFFFFFFFFFFFFFFFFFFF FFFFFFF YYYYYYLLLY
3 3 A D - 0 0 83 48 60 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDQD PPPPPPPPPP
4 4 A I E -AB 30 65A 15 49 18 IIIIIIIIIIIIIIIIIIIIIIIVIIIIIIIIIIIVVVVVVVVVVVVV
5 5 A Y E -AB 29 64A 33 49 0 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
6 6 A V E -AB 28 63A 10 49 30 VVVVVVVVVVVVVVVVVVVVMVVMVVMVVVVVVVVMYVIIIIIIIIII
7 7 A V E + B 0 62A 3 49 56 VVVVVVVVVVVVVVVVVVVVVVVAVAVAAAAAAAAVAAAAAAAAAAAA
8 8 A T S S+ 0 0 84 49 52 TTTTTTTTTTTTTTTTTTTTTTTTTTITTTTTSTTVVVIIIIIITTTI
9 9 A A S S- 0 0 53 49 62 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATLQQQQQQQQQQ
10 10 A D - 0 0 52 49 7 DDDDDDDDDDDDDDDDDDDDNDDDDDDDDDDDDDDDSDDDDDDDDDDD
11 11 A Y B +F 23 0B 55 49 10 YYYYYYHYYYYYYYYYYYYYYYYYYYYYYYYYYYYYVYYYYYYYYYYY
12 12 A L - 0 0 92 49 89 LLLLLLLLLLLLLLLLLLLLLNNLNTTNNTNNNNNNVSTQQTQQIIIQ
13 13 A P - 0 0 44 49 10 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPQGPPPPPPPPPPP
14 14 A L - 0 0 166 49 98 LLLLLLLLLLLLLLLLLLLLLMMVMAMTTTQQTQQTSPDDDDEEEEED
15 15 A G S S- 0 0 71 49 83 GGGGGGGGGGGGGGGGGGGGGGGGGGGLLLIIIIISVKKKKKAAPPPA
16 16 A A - 0 0 96 49 64 AAAAAAAAAAAAAAAAAAAAAVVAVGAAAAAAAAATSSEDDETTDDGN
17 17 A E > - 0 0 122 49 53 EEEEEEEEEEEEEEEEEEEEDSSESQDSSSTTSTTDGADDDDDDDDDD
18 18 A Q T 3 S+ 0 0 158 49 90 QQQQQQQQQQQQQQQQQQPQPKKKKKRKKKKKKKKPDQIVVVVVTIII
19 19 A D T 3 S+ 0 0 109 49 21 DDDDDDDDDDDDDDDDDDDDEDDEDEEEEDEEDEEEEDEEEEEEEEEE
20 20 A A B < -c 56 0A 34 49 47 AAAAAAAAAAAAAAAAAAAAAAATVATSSSSSSSSAAEAAAAGGSSSG
21 21 A I - 0 0 25 49 7 IIIIIIIIIILIIIIIIIIIIIIIIIIIIIIIIIILFIIIIIIIIIII
22 22 A T - 0 0 104 49 75 TTTAAAASSSSIIIISSLSLTAASAATSSSTTSTSRQEPPPPPPSSSP
23 23 A L B -F 11 0B 9 49 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
24 24 A R > - 0 0 155 49 71 RRRRRRRRRRRRRRRRRRRRRKKKKKKKKKKKKKKVKKEEEEEEEEEE
25 25 A E T 3 S+ 0 0 117 49 37 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEPEQQQQQQQQQQ
26 26 A G T 3 S+ 0 0 39 49 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
27 27 A Q < - 0 0 77 49 0 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
28 28 A Y E +A 6 0A 114 49 70 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYAEIIIIIIIIII
29 29 A V E -AD 5 44A 2 49 0 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
30 30 A E E -AD 4 43A 36 49 8 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEIEEEEEEEEEE
31 31 A V E - D 0 42A 19 49 0 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
32 32 A L E - 0 0A 34 49 3 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLIMLLLLLLLLLLL
33 33 A D E - D 0 41A 110 49 3 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDNDDDDDDDDDD
34 34 A A E + 0 0A 77 49 69 AAAAAAASSSSSSSSSSSSSSSSSSSSSSSSSSSSKTKKKKKKKKKKK
35 35 A A E + 0 0A 56 49 70 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAQTDKKKKKKKKKK
36 36 A H E > - D 0 39A 125 49 54 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHRTKNNNNNNNNNN
37 37 A P T 3 S+ 0 0 103 49 40 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPANPSSSSPPAAAP
38 38 A L T 3 S+ 0 0 136 49 70 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLDKHIVVIAAAAAT
39 39 A R E < -D 36 0A 87 49 57 RRRRRRRRRRRRRRRRRRRRKKKKKKKKKKKKKKKSEKRRRRSSSSSS
40 40 A W E - E 0 57A 79 49 0 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
41 41 A L E +DE 33 56A 24 48 10 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLMKLLLLLLLLL.
42 42 A V E -DE 31 55A 5 48 5 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVIII.
43 43 A R E -DE 30 54A 110 48 5 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRQRRRRRRRRR.
44 44 A T E -D 29 0A 24 48 7 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT.TTTTL
45 45 A K - 0 0 117 47 9 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK..KKKV
46 46 A P - 0 0 82 47 38 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPAAAA..AAAR
47 47 A T > - 0 0 99 48 58 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTSTCRRRRT.RRRT
48 48 A K T 3 S- 0 0 206 49 40 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKPPPPKKPPPK
49 49 A S T 3 S+ 0 0 101 49 72 SSSSSSSSSSSSSSSSSSSNSSSSSSSNNTTTTTTTHQPPPPAAPPPA
50 50 A S < - 0 0 68 49 82 SSSSSSSSSSSSSSSSSSSSSNNTNTSTTTTTTTTTQNRRRRRRKKKR
51 51 A P - 0 0 108 48 34 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPRSSSSPPS.SP
52 52 A S - 0 0 59 48 45 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSIGGGGPPG.GP
53 53 A R - 0 0 169 43 29 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRKRS WKK ..Q
54 54 A Q E + E 0 43A 79 43 56 QQQQQQQQQQQQQQQQQQQQQQQQRQQQQQQQQQQQTE SS S.S
55 55 A G E - E 0 42A 2 43 9 GGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGE GG G.G
56 56 A W E -cE 20 41A 67 43 2 WWWWWWWWWWWWWWWWWWWRWWWWWWFWWWWWWWWWF WW WWW
57 57 A V E - E 0 40A 3 42 7 VVVVVVVVVVVVVVVVVVVVVVVVVV VVVVVVVVVV II VVI
58 58 A S > - 0 0 34 42 47 SSSSSSSSSSSSSSSSSSSSSSSSSS SSSSSSSSPD PP PPP
59 59 A P G > S+ 0 0 31 42 44 PPPPPPPPPPPPPPPPPPPPPPPPPP PPPPPPPPSP GG GGG
60 60 A A G 3 S+ 0 0 86 42 45 AAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAM SS SSS
61 61 A Y G < S+ 0 0 121 42 0 YYYYYYYYYYYYYYYYYYYYYYYYYY YYYYYYYYYY YY YYY
62 62 A L E < -B 7 0A 23 42 10 LLLLLLLLLLLLLLLLLLLLLLLLLL LLLLLLLLFL FF FFF
63 63 A D E -B 6 0A 86 42 24 DDDDDDDDDDDDDDDDDDDDDDDDDD DDDDDDDDDS EE EEE
64 64 A R E +B 5 0A 229 37 43 RRRRRKRRRKRKKKKKKKKKKKKKKK KKKKKKKK S S
65 65 A R E -B 4 0A 126 36 26 RRRRRRRRRRRRRRRRRRRRRRRRRK KKKKKKKK R
66 66 A L - 0 0 154 36 0 LLLLLLLLLLLLLLLLLLLLLLLLLL LLLLLLLL L
67 67 A K 0 0 117 35 0 KKKKKKKKKKKKKKKKKKKKKKKKKK KKKKKKKK
68 68 A L 0 0 232 35 15 LLLLLLLLLLLLLLLLLLLLLLLLLL LLLIILVI
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 71 29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34 0 0 0.606 20 0.59
2 2 A 0 7 0 0 78 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.665 22 0.91
3 3 A 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 2 0 0 77 48 0 0 0.608 20 0.39
4 4 A 29 0 71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49 0 0 0.598 19 0.82
5 5 A 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 49 0 0 0.000 0 1.00
6 6 A 69 0 20 8 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 49 0 0 0.862 28 0.70
7 7 A 55 0 0 0 0 0 0 0 45 0 0 0 0 0 0 0 0 0 0 0 49 0 0 0.688 22 0.43
8 8 A 6 0 16 0 0 0 0 0 0 0 2 76 0 0 0 0 0 0 0 0 49 0 0 0.758 25 0.47
9 9 A 0 2 0 0 0 0 0 0 76 0 0 2 0 0 0 0 20 0 0 0 49 0 0 0.695 23 0.38
10 10 A 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 2 96 49 0 0 0.199 6 0.92
11 11 A 2 0 0 0 0 0 96 0 0 0 0 0 0 2 0 0 0 0 0 0 49 0 0 0.199 6 0.90
12 12 A 2 47 6 0 0 0 0 0 0 0 2 10 0 0 0 0 10 0 22 0 49 0 0 1.486 49 0.10
13 13 A 0 0 0 0 0 0 0 2 0 96 0 0 0 0 0 0 2 0 0 0 49 0 0 0.199 6 0.90
14 14 A 2 45 0 8 0 0 0 0 2 2 2 10 0 0 0 0 8 10 0 10 49 0 0 1.785 59 0.01
15 15 A 2 6 10 0 0 0 0 57 6 6 2 0 0 0 0 10 0 0 0 0 49 0 0 1.457 48 0.16
16 16 A 6 0 0 0 0 0 0 4 65 0 4 6 0 0 0 0 0 4 2 8 49 0 0 1.296 43 0.36
17 17 A 0 0 0 0 0 0 0 2 2 0 14 8 0 0 0 0 2 45 0 27 49 0 0 1.432 47 0.46
18 18 A 10 0 8 0 0 0 0 0 0 6 0 2 0 0 2 27 43 0 0 2 49 0 0 1.562 52 0.09
19 19 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45 0 55 49 0 0 0.688 22 0.79
20 20 A 2 0 0 0 0 0 0 6 63 0 22 4 0 0 0 0 0 2 0 0 49 0 0 1.085 36 0.53
21 21 A 0 4 94 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49 0 0 0.269 8 0.92
22 22 A 0 4 8 0 0 0 0 0 16 14 33 18 0 0 2 0 2 2 0 0 49 0 0 1.824 60 0.25
23 23 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49 0 0 0.000 0 1.00
24 24 A 2 0 0 0 0 0 0 0 0 0 0 0 0 0 45 33 0 20 0 0 49 0 0 1.129 37 0.29
25 25 A 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 20 78 0 0 49 0 0 0.601 20 0.63
26 26 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 49 0 0 0.000 0 1.00
27 27 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 49 0 0 0.000 0 1.00
28 28 A 0 0 20 0 0 0 76 0 2 0 0 0 0 0 0 0 0 2 0 0 49 0 0 0.695 23 0.30
29 29 A 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49 0 0 0.000 0 1.00
30 30 A 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 98 0 0 49 0 0 0.100 3 0.92
31 31 A 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49 0 0 0.000 0 1.00
32 32 A 0 96 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49 0 0 0.199 6 0.96
33 33 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 98 49 0 0 0.100 3 0.96
34 34 A 0 0 0 0 0 0 0 0 16 0 57 2 0 0 0 24 0 0 0 0 49 0 0 1.040 34 0.30
35 35 A 0 0 0 0 0 0 0 0 73 0 0 2 0 0 0 20 2 0 0 2 49 0 0 0.789 26 0.29
36 36 A 0 0 0 0 0 0 0 0 0 0 0 2 0 73 2 2 0 0 20 0 49 0 0 0.789 26 0.46
37 37 A 0 0 0 0 0 0 0 0 8 82 8 0 0 0 0 0 0 0 2 0 49 0 0 0.654 21 0.60
38 38 A 4 73 4 0 0 0 0 0 10 0 0 2 0 2 0 2 0 0 0 2 49 0 0 1.038 34 0.29
39 39 A 0 0 0 0 0 0 0 0 0 0 14 0 0 0 51 33 0 2 0 0 49 0 0 1.066 35 0.43
40 40 A 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49 1 0 0.000 0 1.00
41 41 A 0 96 0 2 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 48 0 0 0.202 6 0.90
42 42 A 94 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48 0 0 0.234 7 0.94
43 43 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 98 0 2 0 0 0 48 1 0 0.101 3 0.94
44 44 A 0 2 0 0 0 0 0 0 0 0 0 98 0 0 0 0 0 0 0 0 48 1 0 0.101 3 0.92
45 45 A 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 98 0 0 0 0 47 0 0 0.103 3 0.91
46 46 A 0 0 0 0 0 0 0 0 15 83 0 0 0 0 2 0 0 0 0 0 47 0 0 0.520 17 0.61
47 47 A 0 0 0 0 0 0 0 0 0 0 2 81 2 0 15 0 0 0 0 0 48 0 0 0.611 20 0.42
48 48 A 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 86 0 0 0 0 49 0 0 0.410 13 0.59
49 49 A 0 0 0 0 0 0 0 0 6 14 55 14 0 2 0 0 2 0 6 0 49 0 0 1.385 46 0.28
50 50 A 0 0 0 0 0 0 0 0 0 0 47 22 0 0 14 6 2 0 8 0 49 1 0 1.423 47 0.17
51 51 A 0 0 0 0 0 0 0 0 0 85 13 0 0 0 2 0 0 0 0 0 48 0 0 0.475 15 0.65
52 52 A 0 0 2 0 0 0 0 13 0 6 79 0 0 0 0 0 0 0 0 0 48 1 0 0.699 23 0.54
53 53 A 0 0 0 0 0 2 0 0 0 0 2 0 0 0 86 7 2 0 0 0 43 0 0 0.577 19 0.70
54 54 A 0 0 0 0 0 0 0 0 0 0 9 2 0 0 2 0 84 2 0 0 43 0 0 0.632 21 0.43
55 55 A 0 0 0 0 0 0 0 95 0 0 0 0 0 0 0 0 0 5 0 0 43 0 0 0.188 6 0.90
56 56 A 0 0 0 0 5 93 0 0 0 0 0 0 0 0 2 0 0 0 0 0 43 0 0 0.297 9 0.97
57 57 A 93 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42 0 0 0.257 8 0.92
58 58 A 0 0 0 0 0 0 0 0 0 14 83 0 0 0 0 0 0 0 0 2 42 0 0 0.519 17 0.52
59 59 A 0 0 0 0 0 0 0 12 0 86 2 0 0 0 0 0 0 0 0 0 42 0 0 0.474 15 0.56
60 60 A 0 0 0 2 0 0 0 0 86 0 12 0 0 0 0 0 0 0 0 0 42 0 0 0.474 15 0.55
61 61 A 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 42 0 0 0.000 0 1.00
62 62 A 0 86 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42 0 0 0.410 13 0.89
63 63 A 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 12 0 86 42 0 0 0.474 15 0.75
64 64 A 0 0 0 0 0 0 0 0 0 0 5 0 0 0 27 68 0 0 0 0 37 0 0 0.776 25 0.57
65 65 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 75 25 0 0 0 0 36 0 0 0.562 18 0.73
66 66 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36 0 0 0.000 0 1.00
67 67 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 35 0 0 0.000 0 1.00
68 68 A 3 89 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.420 14 0.84
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
//