Complet list of 1uvg hssp file
Complete list of 1uvg.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1UVG
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-04-14
HEADER SERINE PROTEINASE INHIBITOR 20-JAN-04 1UVG
COMPND MOL_ID: 1; MOLECULE: SERINE PROTEINASE INHIBITOR KAZAL TYPE 5; CHAIN:
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: HOMO SAPIENS; ORGANISM_COMMON: HUMAN;
AUTHOR K.VITZITHUM,P.ROESCH,U.C.MARX
DBREF 1UVG A -2 -1 PDB 1UVG 1UVG -2 -1
DBREF 1UVG A 1 76 UNP Q9NQ38 ISK5_HUMAN 989 1064
SEQLENGTH 76
NCHAIN 1 chain(s) in 1UVG data set
NALIGN 63
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : G1RGB7_NOMLE 1.00 1.00 1 76 1018 1093 76 0 0 1093 G1RGB7 Uncharacterized protein OS=Nomascus leucogenys GN=SPINK5 PE=4 SV=1
2 : G3S555_GORGO 1.00 1.00 1 76 1011 1086 76 0 0 1086 G3S555 Uncharacterized protein OS=Gorilla gorilla gorilla PE=4 SV=1
3 : H2PGZ7_PONAB 1.00 1.00 1 76 1013 1088 76 0 0 1088 H2PGZ7 Uncharacterized protein OS=Pongo abelii GN=SPINK5 PE=4 SV=1
4 : ISK5_HUMAN 1UVF 1.00 1.00 1 76 989 1064 76 0 0 1064 Q9NQ38 Serine protease inhibitor Kazal-type 5 OS=Homo sapiens GN=SPINK5 PE=1 SV=2
5 : G3SGQ2_GORGO 0.99 1.00 1 76 948 1023 76 0 0 1023 G3SGQ2 Uncharacterized protein OS=Gorilla gorilla gorilla PE=4 SV=1
6 : F6VTF2_MACMU 0.96 0.97 1 74 1018 1091 74 0 0 1093 F6VTF2 Uncharacterized protein OS=Macaca mulatta GN=SPINK5 PE=4 SV=1
7 : F6VTG0_MACMU 0.96 0.97 1 76 39 114 76 0 0 114 F6VTG0 Uncharacterized protein OS=Macaca mulatta GN=SPINK5 PE=4 SV=1
8 : F7F102_MACMU 0.96 0.97 1 74 988 1061 74 0 0 1063 F7F102 Uncharacterized protein OS=Macaca mulatta GN=SPINK5 PE=4 SV=1
9 : F7F106_MACMU 0.96 0.97 1 74 987 1060 74 0 0 1062 F7F106 Uncharacterized protein OS=Macaca mulatta GN=SPINK5 PE=4 SV=1
10 : F7HF00_CALJA 0.95 0.96 1 76 1013 1088 76 0 0 1088 F7HF00 Uncharacterized protein OS=Callithrix jacchus GN=SPINK5 PE=4 SV=1
11 : G7MVF1_MACMU 0.95 0.97 1 74 1018 1091 74 0 0 1091 G7MVF1 Putative uncharacterized protein (Fragment) OS=Macaca mulatta GN=EGK_16996 PE=4 SV=1
12 : G7P8L9_MACFA 0.95 0.97 1 74 1018 1091 74 0 0 1091 G7P8L9 Putative uncharacterized protein (Fragment) OS=Macaca fascicularis GN=EGM_15519 PE=4 SV=1
13 : F7HF27_CALJA 0.93 0.96 1 76 927 1002 76 0 0 1002 F7HF27 Uncharacterized protein (Fragment) OS=Callithrix jacchus GN=SPINK5 PE=4 SV=1
14 : G1SVW2_RABIT 0.84 0.95 1 76 1019 1094 76 0 0 1094 G1SVW2 Uncharacterized protein OS=Oryctolagus cuniculus GN=SPINK5 PE=4 SV=2
15 : M3WLW6_FELCA 0.84 0.95 1 74 993 1066 74 0 0 1068 M3WLW6 Uncharacterized protein OS=Felis catus GN=SPINK5 PE=4 SV=1
16 : F1PR80_CANFA 0.83 0.92 1 66 995 1060 66 0 0 1069 F1PR80 Uncharacterized protein OS=Canis familiaris GN=SPINK5 PE=4 SV=2
17 : F1PUI9_CANFA 0.83 0.92 1 66 989 1054 66 0 0 1063 F1PUI9 Uncharacterized protein OS=Canis familiaris GN=SPINK5 PE=4 SV=2
18 : B9VJ40_HORSE 0.82 0.96 1 76 908 983 76 0 0 983 B9VJ40 Serine peptidase inhibitor kazal type 5 (Fragment) OS=Equus caballus GN=SPINK5 PE=2 SV=1
19 : F6W1Z1_HORSE 0.82 0.96 1 76 790 865 76 0 0 865 F6W1Z1 Uncharacterized protein OS=Equus caballus GN=SPINK5 PE=4 SV=1
20 : F6W8K0_HORSE 0.82 0.96 1 76 796 871 76 0 0 871 F6W8K0 Uncharacterized protein OS=Equus caballus GN=SPINK5 PE=4 SV=1
21 : F6W9K9_HORSE 0.82 0.96 1 76 826 901 76 0 0 901 F6W9K9 Uncharacterized protein OS=Equus caballus GN=SPINK5 PE=4 SV=1
22 : Q4VYB4_CANFA 0.82 0.93 1 67 989 1055 67 0 0 1063 Q4VYB4 Serine protease inhibitor Kazal-type 5 (Precursor) OS=Canis familiaris GN=spink5 PE=2 SV=1
23 : A6QQG1_BOVIN 0.81 0.94 1 68 1020 1087 68 0 0 1091 A6QQG1 SPINK5 protein OS=Bos taurus GN=SPINK5 PE=2 SV=1
24 : F1MJH0_BOVIN 0.81 0.94 1 68 1020 1087 68 0 0 1091 F1MJH0 Uncharacterized protein OS=Bos taurus GN=SPINK5 PE=4 SV=2
25 : G1LSF5_AILME 0.80 0.95 1 74 765 838 74 0 0 840 G1LSF5 Uncharacterized protein (Fragment) OS=Ailuropoda melanoleuca GN=SPINK5 PE=4 SV=1
26 : L9KZ66_TUPCH 0.80 0.92 1 71 989 1059 71 0 0 1085 L9KZ66 Serine protease inhibitor Kazal-type 5 OS=Tupaia chinensis GN=TREES_T100002872 PE=4 SV=1
27 : M3Y8K6_MUSPF 0.80 0.92 1 76 988 1063 76 0 0 1063 M3Y8K6 Uncharacterized protein OS=Mustela putorius furo GN=SPINK5 PE=4 SV=1
28 : S7NCM2_MYOBR 0.79 0.92 1 75 990 1064 75 0 0 1105 S7NCM2 Serine protease inhibitor Kazal-type 5 OS=Myotis brandtii GN=D623_10006549 PE=4 SV=1
29 : G1PGK9_MYOLU 0.78 0.93 1 74 982 1055 74 0 0 1057 G1PGK9 Uncharacterized protein OS=Myotis lucifugus GN=SPINK5 PE=4 SV=1
30 : F1RLZ2_PIG 0.77 0.92 1 74 653 726 74 0 0 731 F1RLZ2 Uncharacterized protein (Fragment) OS=Sus scrofa GN=SPINK5 PE=4 SV=2
31 : I3M087_SPETR 0.77 0.88 1 73 988 1060 73 0 0 1060 I3M087 Uncharacterized protein OS=Spermophilus tridecemlineatus GN=SPINK5 PE=4 SV=1
32 : H0X8R7_OTOGA 0.76 0.88 1 74 981 1054 74 0 0 1056 H0X8R7 Uncharacterized protein OS=Otolemur garnettii GN=SPINK5 PE=4 SV=1
33 : H0VQM2_CAVPO 0.75 0.91 1 76 950 1025 76 0 0 1032 H0VQM2 Uncharacterized protein OS=Cavia porcellus PE=4 SV=1
34 : M0R9C2_RAT 0.71 0.89 1 70 973 1042 70 0 0 1048 M0R9C2 Uncharacterized protein OS=Rattus norvegicus GN=LOC100910851 PE=4 SV=1
35 : M0RBA7_RAT 0.71 0.89 1 70 985 1054 70 0 0 1060 M0RBA7 Uncharacterized protein OS=Rattus norvegicus GN=LOC100910851 PE=4 SV=1
36 : Q148R4_MOUSE 0.68 0.88 1 76 939 1014 76 0 0 1017 Q148R4 Protein Spink5 OS=Mus musculus GN=Spink5 PE=2 SV=1
37 : Q5K5D4_MOUSE 0.68 0.89 1 76 939 1014 76 0 0 1017 Q5K5D4 Spink5 protein (Precursor) OS=Mus musculus GN=Spink5 PE=2 SV=1
38 : D3ZET2_RAT 0.67 0.86 1 76 941 1016 76 0 0 1019 D3ZET2 Protein LOC100910851 OS=Rattus norvegicus GN=Spink5 PE=4 SV=2
39 : F6TGT0_MONDO 0.61 0.85 1 62 856 917 62 0 0 930 F6TGT0 Uncharacterized protein OS=Monodelphis domestica GN=SPINK5 PE=4 SV=2
40 : F7EYC2_ORNAN 0.42 0.60 5 65 5 66 62 1 1 264 F7EYC2 Uncharacterized protein (Fragment) OS=Ornithorhynchus anatinus PE=4 SV=1
41 : D0N793_PHYIT 0.40 0.53 18 75 83 140 58 0 0 444 D0N793 Protease inhibitor Epi11 OS=Phytophthora infestans (strain T30-4) GN=PITG_07096 PE=4 SV=1
42 : G3HYK4_CRIGR 0.39 0.59 5 62 90 148 59 1 1 832 G3HYK4 Serine protease inhibitor Kazal-type 5 OS=Cricetulus griseus GN=I79_016141 PE=4 SV=1
43 : G4Z0L2_PHYSP 0.39 0.54 18 76 115 173 59 0 0 324 G4Z0L2 Kazal-like serine protease inhibitor domain-containing protein OS=Phytophthora sojae (strain P6497) GN=PHYSODRAFT_555498 PE=4 SV=1
44 : G3SR74_LOXAF 0.38 0.62 5 63 97 156 60 1 1 713 G3SR74 Uncharacterized protein OS=Loxodonta africana PE=4 SV=1
45 : G3TV16_LOXAF 0.38 0.62 5 63 97 156 60 1 1 604 G3TV16 Uncharacterized protein OS=Loxodonta africana PE=4 SV=1
46 : G3VDY0_SARHA 0.38 0.57 5 65 37 97 61 0 0 141 G3VDY0 Uncharacterized protein OS=Sarcophilus harrisii PE=4 SV=1
47 : M0RC67_RAT 0.38 0.62 5 61 4 61 58 1 1 795 M0RC67 Uncharacterized protein (Fragment) OS=Rattus norvegicus GN=LOC100910851 PE=4 SV=1
48 : M0RC68_RAT 0.38 0.62 5 61 99 156 58 1 1 680 M0RC68 Uncharacterized protein OS=Rattus norvegicus GN=LOC100911797 PE=4 SV=1
49 : Q3TRK5_MOUSE 0.38 0.59 5 61 98 155 58 1 1 600 Q3TRK5 Putative uncharacterized protein (Fragment) OS=Mus musculus GN=Spink5 PE=2 SV=1
50 : Q8BM18_MOUSE 0.38 0.59 5 61 98 155 58 1 1 601 Q8BM18 Putative uncharacterized protein (Fragment) OS=Mus musculus GN=Spink5 PE=2 SV=1
51 : Q8BM23_MOUSE 0.38 0.59 5 61 98 155 58 1 1 708 Q8BM23 Putative uncharacterized protein (Fragment) OS=Mus musculus GN=Spink5 PE=2 SV=1
52 : B4DRW4_HUMAN 0.37 0.56 5 65 78 139 62 1 1 801 B4DRW4 cDNA FLJ59287, highly similar to Serine protease inhibitor Kazal-type 5 (Fragment) OS=Homo sapiens PE=2 SV=1
53 : B4DWS3_HUMAN 0.37 0.56 5 65 78 139 62 1 1 876 B4DWS3 cDNA FLJ60407, highly similar to Serine protease inhibitor Kazal-type 5 (Fragment) OS=Homo sapiens PE=2 SV=1
54 : E7EWP9_HUMAN 0.37 0.56 5 65 78 139 62 1 1 869 E7EWP9 Hemofiltrate peptide HF6478 (Fragment) OS=Homo sapiens GN=SPINK5 PE=2 SV=1
55 : Q95LZ2_MACFA 0.37 0.57 5 63 61 120 60 1 1 419 Q95LZ2 Putative uncharacterized protein OS=Macaca fascicularis PE=2 SV=1
56 : IOVO_DRONO 0.36 0.58 18 76 45 103 59 0 0 207 P05560 Ovomucoid OS=Dromaius novaehollandiae PE=1 SV=3
57 : M7BIL2_CHEMY 0.36 0.49 5 62 30 88 59 1 1 167 M7BIL2 Serine protease inhibitor Kazal-type 6 OS=Chelonia mydas GN=UY3_05738 PE=4 SV=1
58 : F1QTU8_DANRE 0.35 0.56 2 58 31 87 57 0 0 87 F1QTU8 Uncharacterized protein (Fragment) OS=Danio rerio GN=LOC100537783 PE=3 SV=1
59 : E5RFU9_HUMAN 0.34 0.53 5 76 97 169 73 1 1 201 E5RFU9 Hemofiltrate peptide HF6478 OS=Homo sapiens GN=SPINK5 PE=2 SV=1
60 : M7B5Z7_CHEMY 0.32 0.54 5 76 194 264 72 1 1 427 M7B5Z7 Ovoinhibitor (Fragment) OS=Chelonia mydas GN=UY3_11953 PE=4 SV=1
61 : G3VPX1_SARHA 0.31 0.46 1 74 425 493 74 1 5 1537 G3VPX1 Uncharacterized protein (Fragment) OS=Sarcophilus harrisii GN=AGRN PE=4 SV=1
62 : G3VPX2_SARHA 0.31 0.46 1 74 451 519 74 1 5 1516 G3VPX2 Uncharacterized protein (Fragment) OS=Sarcophilus harrisii GN=AGRN PE=4 SV=1
63 : G3VPX3_SARHA 0.31 0.46 1 74 437 505 74 1 5 1512 G3VPX3 Uncharacterized protein (Fragment) OS=Sarcophilus harrisii GN=AGRN PE=4 SV=1
## ALIGNMENTS 1 - 63
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A D >> 0 0 107 43 9 DDDDDDDDDDNNDDDDDDDDDDNNDDDDDDDDDDDDDDE DDD
2 2 A S H >> + 0 0 25 44 7 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS A SSS
3 3 A E H 34 S+ 0 0 146 44 43 EEEEEEEEEGEEGEEEEEEEEEEEEEEEEEEEEHHDDHE D AAA
4 4 A M H X4 S+ 0 0 125 44 49 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMM D HHH
5 5 A a H X< S+ 0 0 27 61 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC C CCCCCCCCCCCC CCCCCCC
6 6 A K T 3< S+ 0 0 167 61 63 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKQS E DDSEEEEEDDDD TPDSEEE
7 7 A D T < S+ 0 0 136 61 70 DDDDDDDDDDDDDHHHHHHHHHHHQHHHHHQDHNNNNNKG D DDKNNSSSDDDD RTDECCC
8 8 A Y < - 0 0 86 61 30 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYF F FFYFFFFFFFFF YVFYPPP
9 9 A R - 0 0 212 61 51 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRQ K RRSKKKKKKKKK PPKHAAA
10 10 A V - 0 0 52 61 85 VVVVVVVVVVVVVVVVVVVVVVIIVVVVVVVVVIIIIIVK Q RRMQQQQQKKKN QNKRPPP
11 11 A L B > -A 15 0A 89 61 88 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLIG G GGVRRRRRGGGG ACGGVVV
12 12 A P T 4 S+ 0 0 123 61 71 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPE R EEQRRRRREEEE KAETCCC
13 13 A R T 4 S+ 0 0 239 61 45 RRRRRRRRRRRRRRKKKKKKKKRRKKKKKKRRRRRRRRRR K RRDKKKKKRRRR EQRVPPP
14 14 A I T 4 S+ 0 0 97 61 90 IIIIIIIIIIIIIIMMMIIIIMMMMMMMMMMIIVVMMVKD D DDNDDDDDNDDD QYDLEEE
15 15 A G B < -A 11 0A 26 61 16 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGg g ggGggggggggg gAgIDDD
16 16 A Y - 0 0 38 57 12 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYFYFYYYYYYf f ffLfffffffff fVf....
17 17 A L + 0 0 131 58 33 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL V IILIIIIIIIII FMIS...
18 18 A b - 0 0 57 61 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC...
19 19 A P - 0 0 72 61 20 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPNPTTTTPPPPPPPPPPPTPPP...
20 20 A K S S+ 0 0 200 61 59 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKPKKKKKKKLKSKFFRSSSSSDDDDKKRDR...
21 21 A D S S- 0 0 117 64 69 DDDDDDDDDDDDDDNNNNNNNNNNNDNNNNDNDNNNNNNDIDIEEFDDDDDYYYFIVNYINNN
22 22 A L + 0 0 92 64 65 LLLLLLLLLLLLLLLLLLLLLLLLLSLLLLLSLLLLLLLDLAYNNFAATTTYYYYLYYYLMMM
23 23 A K - 0 0 119 64 78 KKKKKKKKKKKKKQHQQQQQQQQQQEQQQQQQQNNNNNQTKPMAADSSSSSEEEENKEEAVVV
24 24 A P - 0 0 55 64 50 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPYPPAPAAPAASSSAAAAPPPAEKKK
25 25 A V E -BC 33 55B 6 64 3 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVLVVVVVVVVVIVVVVVVV
26 26 A c E -BC 32 54B 2 64 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
27 27 A G E > - C 0 52B 0 64 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
28 28 A D T 3 S+ 0 0 66 64 65 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDETSTSTTSTTTTTTTTTSTTTTSSS
29 29 A D T 3 S- 0 0 77 64 2 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDNDDDDDD
30 30 A G S < S+ 0 0 59 64 3 GGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGG
31 31 A Q - 0 0 71 64 70 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQQKQQQQQKKVKVKKNKKKKKKKKKVMKKVVVV
32 32 A T E -B 26 0B 38 64 3 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTDTTTTTTTTTTTTTTTTT
33 33 A Y E -B 25 0B 15 64 0 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
34 34 A N S S+ 0 0 94 64 71 NNNNNNNNNNNNNNNNNNNNNNNNNSNNNNNKSAASSANRPRGSSSPPRRRDDDGSGPDPGGG
35 35 A N S S- 0 0 9 64 32 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNHNNSNSSNSSSSSNNNNNNNNNDDD
36 36 A P S >> S+ 0 0 20 64 59 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPRERDRRERRRRRRRRRDKERDPPP
37 37 A b H 3> S+ 0 0 16 64 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
38 38 A M H 3> S+ 0 0 96 64 67 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMLTLEMAAMHHEEEAAAELLVAMQQQ
39 39 A L H X> S+ 0 0 1 64 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLFLLLLLLLLLLLLLLLLLLLL
40 40 A a H >X S+ 0 0 4 64 23 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCGCCCCCCCCCCCCCCCCCRRR
41 41 A H H >X S+ 0 0 81 64 80 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHAVAVAAAAAAAAAAAAASMAATTT
42 42 A E H - 0 0 12 64 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
59 59 A E G > S+ 0 0 135 63 60 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEEEEEEELGPEEVGGGGGKKKKKG KKHHH
60 60 A E G 3 S+ 0 0 148 63 52 EEEEEEEEEEEEEEEEEDDDDEEEEEEKKEEDDEEEEEDSTSENNQSSSSSSSSSEE SEEEE
61 61 A S G < S+ 0 0 94 63 52 SSSSSSSSSSSSSGNNNSSSSNNNNSNNNTSSSNNSSNEHESSHHCSSSSSSSSGAK SKSSS
62 62 A S S < S- 0 0 46 58 66 SSSSSSSSSSSSSSSIISSSSISSSSSSSSSSKSSSSSPGTSSNNP NNNNVG NTIII
63 63 A T - 0 0 105 55 65 TTTTTTTTTTTTTDTPPTTTTPIIITITTIITTNNNNN PT TPPK PPPPP PATTT
64 64 A P S S+ 0 0 139 52 76 PPPPPPPPPPPPPPPEEPPPPEEEPPPPPPPPPLLLLL KP S E EEE I EAHHH
65 65 A G S S- 0 0 50 52 59 GGGGGEEEEGEEGGGTTGGGGTEEEGEEKEEEEEEKKE ES S E QQQ D QPGGG
66 66 A T >> - 0 0 103 47 44 TTTTTTTTTTTTTATTTTTTTTTTTTTTTKTATAATTA S T C FETTT
67 67 A T H >> S+ 0 0 111 45 64 TTTTTTTTTTTTTTT TTTTSTTTATTTTPTKVVVVV T G S CCPPP
68 68 A A H >4 S+ 0 0 52 44 71 AAAAAAAAATAATPP VVVV PPPAPPPPVSPSSSSS D S K ETPPP
69 69 A A H <4 S+ 0 0 63 42 71 AAAAAAAAAAAAAVL PPPP LVLLLLDVGAATTA G T Y PSAAA
70 70 A S H << S+ 0 0 92 42 71 SSSSSSSSSSSSSSD SSSS NKDSSSAISGGGGG S G A VHQQQ
71 71 A M S << S+ 0 0 158 40 86 MMMMMKKKKMKKMLV VVVV VILVVLQTV TTT E T N MRPPP
72 72 A P S S- 0 0 65 39 48 PPPPPPPPPPPPPPP PPPP P PPPPAPR PPL E D A VRPPP
73 73 A P - 0 0 127 39 63 PPPPPSSSSTASTAA AAAA A AAAASTT AAA C C T GTTTT
74 74 A S - 0 0 94 38 55 SSSSSSSSSSSSSSS SSSS S SSSS SG SSS N P N ETAAA
75 75 A D 0 0 171 25 48 DDDDD D D DD GGGG DA V EEE D D E GT
76 76 A E 0 0 240 23 49 EEEEN E E NK KKKK K E KKK E E ED
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 88 43 0 0 0.418 13 0.90
2 2 A 0 0 0 0 0 0 0 0 2 0 98 0 0 0 0 0 0 0 0 0 44 0 0 0.108 3 0.92
3 3 A 0 0 0 0 0 0 0 5 7 0 0 0 0 7 0 0 0 75 0 7 44 0 0 0.906 30 0.56
4 4 A 0 0 0 91 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 2 44 0 0 0.356 11 0.50
5 5 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 61 0 0 0.000 0 1.00
6 6 A 0 0 0 0 0 0 0 0 0 2 5 2 0 0 0 64 2 15 0 11 61 0 0 1.167 38 0.37
7 7 A 0 0 0 0 0 0 0 2 0 0 5 2 5 28 2 3 3 2 11 38 61 0 0 1.762 58 0.29
8 8 A 2 0 0 0 23 0 70 0 0 5 0 0 0 0 0 0 0 0 0 0 61 0 0 0.800 26 0.69
9 9 A 0 0 0 0 0 0 0 0 5 3 2 0 0 2 69 18 2 0 0 0 61 0 0 1.028 34 0.49
10 10 A 54 0 11 2 0 0 0 0 0 5 0 0 0 0 5 8 11 0 3 0 61 0 0 1.510 50 0.14
11 11 A 7 64 2 0 0 0 0 16 2 0 0 0 2 0 8 0 0 0 0 0 61 0 0 1.168 38 0.12
12 12 A 0 0 0 0 0 0 0 0 2 66 0 2 5 0 10 2 2 13 0 0 61 0 0 1.189 39 0.29
13 13 A 2 0 0 0 0 0 0 0 0 5 0 0 0 0 56 33 2 2 0 2 61 0 0 1.109 37 0.54
14 14 A 5 2 34 25 0 0 2 0 0 0 0 0 0 0 0 2 2 5 3 21 61 0 0 1.719 57 0.09
15 15 A 0 0 2 0 0 0 0 92 2 0 0 0 0 0 0 0 0 0 0 5 61 4 15 0.361 12 0.84
16 16 A 2 2 0 0 30 0 67 0 0 0 0 0 0 0 0 0 0 0 0 0 57 0 0 0.773 25 0.87
17 17 A 2 72 21 2 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 58 0 0 0.840 28 0.67
18 18 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 61 0 0 0.000 0 1.00
19 19 A 0 0 0 0 0 0 0 0 0 90 0 8 0 0 0 0 0 0 2 0 61 0 0 0.366 12 0.79
20 20 A 0 2 0 0 3 0 0 0 0 2 10 0 0 0 5 70 0 0 0 8 61 0 0 1.075 35 0.40
21 21 A 2 0 6 0 3 0 6 0 0 0 0 0 0 0 0 0 0 3 41 39 64 0 0 1.361 45 0.31
22 22 A 0 64 0 5 2 0 13 0 5 0 3 5 0 0 0 0 0 0 3 2 64 0 0 1.322 44 0.35
23 23 A 5 0 0 2 0 0 0 0 5 2 8 2 0 2 0 25 30 11 9 2 64 0 0 1.982 66 0.21
24 24 A 0 0 0 0 0 0 2 0 16 72 5 0 0 0 0 5 0 2 0 0 64 0 0 0.944 31 0.50
25 25 A 97 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 64 0 0 0.161 5 0.97
26 26 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 64 0 0 0.000 0 1.00
27 27 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 64 0 0 0.000 0 1.00
28 28 A 0 0 0 0 0 0 0 0 0 0 11 27 0 0 0 0 0 2 0 61 64 0 0 0.961 32 0.34
29 29 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 98 64 0 0 0.080 2 0.98
30 30 A 0 0 0 0 0 0 0 97 0 0 0 0 0 0 0 0 0 0 0 3 64 0 0 0.139 4 0.96
31 31 A 11 0 0 2 0 0 0 0 0 0 0 0 0 0 2 27 58 0 2 0 64 0 0 1.106 36 0.30
32 32 A 0 0 0 0 0 0 0 0 0 0 0 98 0 0 0 0 0 0 0 2 64 0 0 0.080 2 0.96
33 33 A 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 64 0 0 0.000 0 1.00
34 34 A 0 0 0 0 0 0 0 9 5 8 13 0 0 0 8 2 0 0 50 6 64 0 0 1.608 53 0.29
35 35 A 0 0 0 0 0 0 0 0 0 0 13 0 0 2 0 0 0 0 81 5 64 0 0 0.637 21 0.68
36 36 A 0 0 0 0 0 0 0 0 0 67 0 0 0 0 22 2 0 5 0 5 64 0 0 0.952 31 0.40
37 37 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 64 0 0 0.000 0 1.00
38 38 A 2 6 0 66 0 0 0 0 9 0 0 2 0 3 0 0 5 8 0 0 64 0 0 1.253 41 0.33
39 39 A 0 98 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 64 0 0 0.080 2 0.99
40 40 A 0 0 0 0 0 0 0 3 0 0 0 0 92 0 5 0 0 0 0 0 64 0 0 0.327 10 0.76
41 41 A 3 0 0 2 0 0 0 0 27 0 2 5 0 63 0 0 0 0 0 0 64 0 0 1.028 34 0.19
42 42 A 0 0 5 0 0 0 2 2 5 0 2 0 0 2 0 2 0 83 0 0 64 0 0 0.768 25 0.59
43 43 A 0 0 3 0 0 0 0 0 5 0 0 0 0 0 0 0 2 0 89 2 64 0 0 0.485 16 0.73
44 44 A 0 67 2 0 0 2 0 0 19 0 2 0 8 0 0 0 0 2 0 0 64 0 0 1.040 34 0.19
45 45 A 0 2 44 17 0 0 0 0 0 0 0 0 0 0 5 23 0 9 0 0 64 0 0 1.435 47 0.14
46 46 A 0 0 0 0 0 0 2 0 0 0 11 14 2 6 56 3 5 0 2 0 64 0 0 1.462 48 0.21
47 47 A 0 0 0 0 0 0 0 17 0 0 2 0 0 2 6 3 70 0 0 0 64 0 0 0.962 32 0.45
48 48 A 0 0 2 2 0 0 0 2 2 0 17 61 0 0 5 0 2 0 6 3 64 0 0 1.354 45 0.30
49 49 A 0 2 2 0 0 0 0 0 0 0 2 6 0 8 0 0 13 0 67 2 64 0 0 1.160 38 0.41
50 50 A 17 0 23 0 0 0 0 0 0 0 0 59 0 0 0 0 0 0 0 0 64 0 0 0.952 31 0.40
51 51 A 0 2 0 0 0 0 0 14 0 0 2 8 0 55 9 0 0 3 0 8 64 0 0 1.464 48 0.18
52 52 A 22 0 67 3 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 64 0 0 0.907 30 0.62
53 53 A 3 3 0 0 0 0 0 0 2 0 2 0 0 8 55 25 2 0 0 2 64 0 0 1.352 45 0.42
54 54 A 0 0 0 0 0 0 2 0 0 0 77 0 0 11 0 9 0 0 2 0 64 0 0 0.798 26 0.49
55 55 A 0 2 0 0 5 0 0 0 0 3 2 19 0 0 0 13 6 44 0 8 64 0 0 1.690 56 0.30
56 56 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 64 0 0 0.000 0 1.00
57 57 A 0 0 0 0 0 0 0 0 3 3 0 6 0 0 16 42 6 23 0 0 64 0 0 1.557 51 0.33
58 58 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 64 0 0 0.000 0 1.00
59 59 A 2 2 0 0 0 0 0 11 0 2 0 0 0 5 0 13 0 67 0 0 63 0 0 1.119 37 0.40
60 60 A 0 0 0 0 0 0 0 0 0 0 19 2 0 0 0 3 2 60 3 11 63 0 0 1.215 40 0.47
61 61 A 0 0 0 0 0 0 0 3 2 0 60 2 2 5 0 3 0 3 21 0 63 0 0 1.301 43 0.47
62 62 A 2 0 10 0 0 0 0 3 0 3 64 3 0 0 0 2 0 0 12 0 58 0 0 1.265 42 0.33
63 63 A 0 0 11 0 0 0 0 0 2 22 0 53 0 0 0 2 0 0 9 2 55 0 0 1.348 44 0.35
64 64 A 0 10 2 0 0 0 0 0 2 58 2 0 0 6 0 2 0 19 0 0 52 0 0 1.328 44 0.24
65 65 A 0 0 0 0 0 0 0 35 0 2 4 6 0 0 0 6 8 38 0 2 52 0 0 1.538 51 0.41
66 66 A 0 0 0 0 2 0 0 0 11 0 2 79 2 0 0 2 0 2 0 0 47 0 0 0.836 27 0.56
67 67 A 11 0 0 0 0 0 0 2 2 9 4 64 4 0 0 2 0 0 0 0 45 0 0 1.273 42 0.35
68 68 A 11 0 0 0 0 0 0 0 30 30 16 7 0 0 0 2 0 2 0 2 44 0 0 1.701 56 0.29
69 69 A 7 14 0 0 0 0 2 5 48 12 2 7 0 0 0 0 0 0 0 2 42 0 0 1.674 55 0.29
70 70 A 2 0 2 0 0 0 0 14 5 0 57 0 0 2 0 2 7 0 2 5 42 0 0 1.521 50 0.28
71 71 A 22 8 3 22 0 0 0 0 0 8 0 13 0 0 3 15 3 3 3 0 40 0 0 2.065 68 0.13
72 72 A 3 3 0 0 0 0 0 0 5 79 0 0 0 0 5 0 0 3 0 3 39 0 0 0.863 28 0.52
73 73 A 0 0 0 0 0 0 0 3 38 15 15 23 5 0 0 0 0 0 0 0 39 0 0 1.528 51 0.37
74 74 A 0 0 0 0 0 0 0 3 8 3 76 3 0 0 0 0 0 3 5 0 38 0 0 0.945 31 0.45
75 75 A 4 0 0 0 0 0 0 20 4 0 0 4 0 0 0 0 0 16 0 52 25 0 0 1.341 44 0.52
76 76 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39 0 48 9 4 23 0 0 1.069 35 0.50
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
40 12 16 1 gDf
42 12 101 1 gGf
44 12 108 1 gDf
45 12 108 1 gDf
47 12 15 1 gDf
48 12 110 1 gDf
49 12 109 1 gDf
50 12 109 1 gDf
51 12 109 1 gDf
52 12 89 1 gDf
53 12 89 1 gDf
54 12 89 1 gDf
55 12 72 1 gDf
57 12 41 1 gPf
59 12 108 1 gDf
//