Complet list of 1uhz hssp file
Complete list of 1uhz.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1UHZ
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-10
HEADER RNA BINDING PROTEIN 14-JUL-03 1UHZ
COMPND MOL_ID: 1; MOLECULE: STAUFEN (RNA BINDING PROTEIN) HOMOLOG 2; CHAIN: A
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: MUS MUSCULUS; ORGANISM_COMMON: HOUSE M
AUTHOR F.HE,Y.MUTO,N.OBAYASHI,M.SHIROUZU,T.TERADA,T.KIGAWA,M.INOUE, T.YABUKI,
DBREF 1UHZ A 8 83 UNP Q8CJ67 STAU2_MOUSE 3 78
SEQLENGTH 89
NCHAIN 1 chain(s) in 1UHZ data set
NALIGN 301
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : F1LN29_RAT 0.99 1.00 8 83 120 195 76 0 0 324 F1LN29 Double-stranded RNA-binding protein Staufen homolog 2 (Fragment) OS=Rattus norvegicus GN=Stau2 PE=4 SV=2
2 : G5E523_BOVIN 0.97 1.00 8 83 172 247 76 0 0 251 G5E523 Uncharacterized protein (Fragment) OS=Bos taurus GN=STAU2 PE=4 SV=1
3 : H0WHW7_OTOGA 0.97 1.00 8 83 171 246 76 0 0 373 H0WHW7 Uncharacterized protein (Fragment) OS=Otolemur garnettii GN=STAU2 PE=4 SV=1
4 : E5RJN7_HUMAN 0.96 1.00 8 83 136 211 76 0 0 320 E5RJN7 Double-stranded RNA-binding protein Staufen homolog 2 (Fragment) OS=Homo sapiens GN=STAU2 PE=2 SV=1
5 : G3ID22_CRIGR 0.96 1.00 8 83 108 183 76 0 0 266 G3ID22 Double-stranded RNA-binding protein Staufen-like 2 OS=Cricetulus griseus GN=I79_021585 PE=4 SV=1
6 : G5EA18_HUMAN 0.96 1.00 8 83 88 163 76 0 0 291 G5EA18 Double-stranded RNA-binding protein Staufen homolog 2 OS=Homo sapiens GN=STAU2 PE=2 SV=1
7 : I3MGM8_SPETR 0.96 1.00 8 83 175 250 76 0 0 274 I3MGM8 Uncharacterized protein OS=Spermophilus tridecemlineatus GN=STAU2 PE=4 SV=1
8 : G9KRJ8_MUSPF 0.91 0.95 8 89 271 352 82 0 0 390 G9KRJ8 Staufen, RNA binding protein,-like protein 2 (Fragment) OS=Mustela putorius furo PE=2 SV=1
9 : M3W337_FELCA 0.91 0.95 8 89 176 257 82 0 0 417 M3W337 Uncharacterized protein OS=Felis catus GN=STAU2 PE=4 SV=1
10 : S9XYL3_9CETA 0.91 0.95 8 88 181 261 81 0 0 378 S9XYL3 Uncharacterized protein OS=Camelus ferus GN=CB1_000850021 PE=4 SV=1
11 : B7Z1P6_HUMAN 0.90 0.95 8 89 288 369 82 0 0 390 B7Z1P6 cDNA FLJ57953, highly similar to Double-stranded RNA-binding protein Staufen homolog 2 OS=Homo sapiens PE=2 SV=1
12 : E7EVI1_HUMAN 0.90 0.95 8 89 288 369 82 0 0 390 E7EVI1 Double-stranded RNA-binding protein Staufen homolog 2 OS=Homo sapiens GN=STAU2 PE=2 SV=1
13 : F1RWI7_PIG 0.90 0.95 8 89 172 253 82 0 0 375 F1RWI7 Uncharacterized protein (Fragment) OS=Sus scrofa GN=STAU2 PE=4 SV=2
14 : F7I4V6_CALJA 0.90 0.95 8 89 288 369 82 0 0 390 F7I4V6 Uncharacterized protein OS=Callithrix jacchus GN=STAU2 PE=4 SV=1
15 : G3RSD3_GORGO 0.90 0.95 8 89 308 389 82 0 0 413 G3RSD3 Uncharacterized protein OS=Gorilla gorilla gorilla GN=101154343 PE=4 SV=1
16 : D3Z6D2_MOUSE 0.89 0.93 3 89 303 389 87 0 0 511 D3Z6D2 Double-stranded RNA-binding protein Staufen homolog 2 OS=Mus musculus GN=Stau2 PE=4 SV=1
17 : E2QRQ3_MOUSE 0.89 0.93 3 89 265 351 87 0 0 473 E2QRQ3 Double-stranded RNA-binding protein Staufen homolog 2 OS=Mus musculus GN=Stau2 PE=2 SV=1
18 : STAU2_MOUSE 1UHZ 0.89 0.93 3 89 303 389 87 0 0 570 Q8CJ67 Double-stranded RNA-binding protein Staufen homolog 2 OS=Mus musculus GN=Stau2 PE=1 SV=1
19 : STAU2_RAT 0.87 0.92 3 89 303 389 87 0 0 571 Q68SB1 Double-stranded RNA-binding protein Staufen homolog 2 OS=Rattus norvegicus GN=Stau2 PE=1 SV=1
20 : A6QQT7_BOVIN 0.86 0.92 3 89 271 357 87 0 0 538 A6QQT7 STAU2 protein OS=Bos taurus GN=STAU2 PE=2 SV=1
21 : D2HVE1_AILME 0.86 0.92 3 89 303 389 87 0 0 510 D2HVE1 Putative uncharacterized protein (Fragment) OS=Ailuropoda melanoleuca GN=PANDA_016331 PE=4 SV=1
22 : F6Y2K0_CANFA 0.86 0.92 3 89 303 389 87 0 0 570 F6Y2K0 Uncharacterized protein OS=Canis familiaris GN=STAU2 PE=4 SV=1
23 : F6Y2K7_CANFA 0.86 0.92 3 89 319 405 87 0 0 624 F6Y2K7 Uncharacterized protein OS=Canis familiaris GN=STAU2 PE=4 SV=1
24 : F7CC90_HORSE 0.86 0.92 3 89 303 389 87 0 0 569 F7CC90 Uncharacterized protein OS=Equus caballus GN=STAU2 PE=4 SV=1
25 : G1L541_AILME 0.86 0.92 3 89 303 389 87 0 0 570 G1L541 Uncharacterized protein OS=Ailuropoda melanoleuca GN=STAU2 PE=4 SV=1
26 : G1L545_AILME 0.86 0.92 3 89 315 401 87 0 0 560 G1L545 Uncharacterized protein (Fragment) OS=Ailuropoda melanoleuca GN=STAU2 PE=4 SV=1
27 : G1NTN4_MYOLU 0.86 0.92 3 89 303 389 87 0 0 510 G1NTN4 Uncharacterized protein OS=Myotis lucifugus GN=STAU2 PE=4 SV=1
28 : G1T685_RABIT 0.86 0.92 3 89 303 389 87 0 0 608 G1T685 Uncharacterized protein OS=Oryctolagus cuniculus GN=STAU2 PE=4 SV=2
29 : G3TB40_LOXAF 0.86 0.92 3 89 303 389 87 0 0 570 G3TB40 Uncharacterized protein OS=Loxodonta africana GN=STAU2 PE=4 SV=1
30 : G5B5T5_HETGA 0.86 0.92 3 89 303 389 87 0 0 511 G5B5T5 Double-stranded RNA-binding protein Staufen-like protein 2 OS=Heterocephalus glaber GN=GW7_21392 PE=4 SV=1
31 : H0VSC1_CAVPO 0.86 0.92 3 89 303 389 87 0 0 570 H0VSC1 Uncharacterized protein OS=Cavia porcellus GN=STAU2 PE=4 SV=1
32 : K9KDF1_HORSE 0.86 0.92 3 89 146 232 87 0 0 450 K9KDF1 Double-stranded RNA-binding protein Staufen-like protein 2-like protein (Fragment) OS=Equus caballus PE=2 SV=1
33 : M3YFN9_MUSPF 0.86 0.92 3 89 303 389 87 0 0 608 M3YFN9 Uncharacterized protein OS=Mustela putorius furo GN=STAU2 PE=4 SV=1
34 : S7MTZ7_MYOBR 0.86 0.92 3 89 303 389 87 0 0 511 S7MTZ7 Double-stranded RNA-binding protein Staufen like protein 2 OS=Myotis brandtii GN=D623_10031672 PE=4 SV=1
35 : W5P7N6_SHEEP 0.86 0.92 3 89 322 408 87 0 0 627 W5P7N6 Uncharacterized protein OS=Ovis aries GN=STAU2 PE=4 SV=1
36 : E7EPX0_HUMAN 0.85 0.92 3 89 283 369 87 0 0 491 E7EPX0 Double-stranded RNA-binding protein Staufen homolog 2 OS=Homo sapiens GN=STAU2 PE=2 SV=1
37 : E7EVJ4_HUMAN 0.85 0.92 3 89 303 389 87 0 0 511 E7EVJ4 Double-stranded RNA-binding protein Staufen homolog 2 OS=Homo sapiens GN=STAU2 PE=2 SV=1
38 : E9PH62_HUMAN 0.85 0.92 3 89 271 357 87 0 0 538 E9PH62 Double-stranded RNA-binding protein Staufen homolog 2 OS=Homo sapiens GN=STAU2 PE=2 SV=1
39 : F7E8M3_MACMU 0.85 0.92 3 89 303 389 87 0 0 570 F7E8M3 Uncharacterized protein OS=Macaca mulatta GN=STAU2 PE=4 SV=1
40 : F7E8M9_MACMU 0.85 0.92 3 89 271 357 87 0 0 538 F7E8M9 Uncharacterized protein OS=Macaca mulatta GN=STAU2 PE=4 SV=1
41 : F7GYK9_CALJA 0.85 0.92 3 89 271 357 87 0 0 479 F7GYK9 Uncharacterized protein OS=Callithrix jacchus GN=STAU2 PE=4 SV=1
42 : F7I776_CALJA 0.85 0.92 3 89 303 389 87 0 0 570 F7I776 Uncharacterized protein OS=Callithrix jacchus GN=STAU2 PE=4 SV=1
43 : F7IBV9_CALJA 0.85 0.92 3 89 199 285 87 0 0 504 F7IBV9 Uncharacterized protein OS=Callithrix jacchus GN=STAU2 PE=4 SV=1
44 : F8VPI7_HUMAN 0.85 0.92 3 89 271 357 87 0 0 479 F8VPI7 Double-stranded RNA-binding protein Staufen homolog 2 OS=Homo sapiens GN=STAU2 PE=4 SV=1
45 : G1QLM7_NOMLE 0.85 0.92 3 89 303 389 87 0 0 608 G1QLM7 Uncharacterized protein OS=Nomascus leucogenys GN=STAU2 PE=4 SV=2
46 : G3RMH6_GORGO 0.85 0.92 3 89 303 389 87 0 0 570 G3RMH6 Uncharacterized protein OS=Gorilla gorilla gorilla GN=101154343 PE=4 SV=1
47 : G7MZK1_MACMU 0.85 0.92 3 89 267 353 87 0 0 534 G7MZK1 Double-stranded RNA-binding protein Staufen-like protein 2 (Fragment) OS=Macaca mulatta GN=EGK_19046 PE=4 SV=1
48 : G7PC15_MACFA 0.85 0.92 3 89 303 389 87 0 0 570 G7PC15 Double-stranded RNA-binding protein Staufen-like protein 2 OS=Macaca fascicularis GN=EGM_17409 PE=4 SV=1
49 : H9EM86_MACMU 0.85 0.92 3 89 271 357 87 0 0 479 H9EM86 Double-stranded RNA-binding protein Staufen homolog 2 isoform e OS=Macaca mulatta GN=STAU2 PE=2 SV=1
50 : H9EM87_MACMU 0.85 0.92 3 89 303 389 87 0 0 570 H9EM87 Double-stranded RNA-binding protein Staufen homolog 2 isoform a OS=Macaca mulatta GN=STAU2 PE=2 SV=1
51 : H9FSY8_MACMU 0.85 0.92 3 89 303 389 87 0 0 608 H9FSY8 Double-stranded RNA-binding protein Staufen homolog 2 isoform a OS=Macaca mulatta GN=STAU2 PE=2 SV=1
52 : I0FQV5_MACMU 0.85 0.92 3 89 271 357 87 0 0 538 I0FQV5 Double-stranded RNA-binding protein Staufen homolog 2 isoform b OS=Macaca mulatta GN=STAU2 PE=2 SV=1
53 : I0FQV7_MACMU 0.85 0.92 3 89 265 351 87 0 0 473 I0FQV7 Double-stranded RNA-binding protein Staufen homolog 2 isoform f OS=Macaca mulatta GN=STAU2 PE=2 SV=1
54 : K6ZDH7_PANTR 0.85 0.92 3 89 271 357 87 0 0 538 K6ZDH7 Staufen, RNA binding protein, homolog 2 OS=Pan troglodytes GN=STAU2 PE=2 SV=1
55 : K7AJ82_PANTR 0.85 0.92 3 89 303 389 87 0 0 570 K7AJ82 Staufen, RNA binding protein, homolog 2 OS=Pan troglodytes GN=STAU2 PE=2 SV=1
56 : K7ASD2_PANTR 0.85 0.92 3 89 271 357 87 0 0 479 K7ASD2 Staufen, RNA binding protein, homolog 2 OS=Pan troglodytes GN=STAU2 PE=2 SV=1
57 : K7DI45_PANTR 0.85 0.92 3 89 271 357 87 0 0 479 K7DI45 Staufen, RNA binding protein, homolog 2 OS=Pan troglodytes GN=STAU2 PE=2 SV=1
58 : K7DLV9_PANTR 0.85 0.92 3 89 271 357 87 0 0 538 K7DLV9 Staufen, RNA binding protein, homolog 2 OS=Pan troglodytes GN=STAU2 PE=2 SV=1
59 : L5LLZ6_MYODS 0.85 0.92 3 89 427 513 87 0 0 635 L5LLZ6 Double-stranded RNA-binding protein Staufen like protein 2 OS=Myotis davidii GN=MDA_GLEAN10021994 PE=4 SV=1
60 : Q2TBD5_HUMAN 0.85 0.92 3 89 271 357 87 0 0 479 Q2TBD5 Staufen, RNA binding protein, homolog 2 (Drosophila) OS=Homo sapiens GN=STAU2 PE=2 SV=1
61 : Q4LE57_HUMAN 0.85 0.92 3 89 282 368 87 0 0 490 Q4LE57 STAU2 variant protein (Fragment) OS=Homo sapiens GN=STAU2 variant protein PE=2 SV=1
62 : Q5R9S9_PONAB 0.85 0.92 3 89 271 357 87 0 0 479 Q5R9S9 Putative uncharacterized protein DKFZp469K0112 OS=Pongo abelii GN=DKFZp469K0112 PE=2 SV=1
63 : Q5RE97_PONAB 0.85 0.92 3 89 283 369 87 0 0 491 Q5RE97 Putative uncharacterized protein DKFZp459N0230 OS=Pongo abelii GN=DKFZp459N0230 PE=2 SV=1
64 : STAU2_HUMAN 0.85 0.92 3 89 303 389 87 0 0 570 Q9NUL3 Double-stranded RNA-binding protein Staufen homolog 2 OS=Homo sapiens GN=STAU2 PE=1 SV=1
65 : U3B6B9_CALJA 0.85 0.92 3 89 303 389 87 0 0 570 U3B6B9 Double-stranded RNA-binding protein Staufen homolog 2 isoform a OS=Callithrix jacchus GN=STAU2 PE=2 SV=1
66 : U3CU12_CALJA 0.85 0.92 3 89 303 389 87 0 0 570 U3CU12 Double-stranded RNA-binding protein Staufen homolog 2 isoform a OS=Callithrix jacchus GN=STAU2 PE=2 SV=1
67 : U3EBJ6_CALJA 0.85 0.92 3 89 271 357 87 0 0 479 U3EBJ6 Double-stranded RNA-binding protein Staufen homolog 2 isoform e OS=Callithrix jacchus GN=STAU2 PE=2 SV=1
68 : U3FWX0_CALJA 0.85 0.92 3 89 271 357 87 0 0 538 U3FWX0 Double-stranded RNA-binding protein Staufen homolog 2 isoform b OS=Callithrix jacchus GN=STAU2 PE=2 SV=1
69 : A8K276_HUMAN 0.84 0.91 3 89 271 357 87 0 0 479 A8K276 cDNA FLJ78317, highly similar to Homo sapiens staufen, RNA binding protein, homolog 2 (Drosophila) (STAU2), mRNA OS=Homo sapiens PE=2 SV=1
70 : H9KWL5_CALJA 0.84 0.92 3 89 282 368 87 0 0 491 H9KWL5 Uncharacterized protein (Fragment) OS=Callithrix jacchus GN=LOC100410699 PE=4 SV=1
71 : L5JV91_PTEAL 0.84 0.92 3 89 303 389 87 0 0 510 L5JV91 Double-stranded RNA-binding protein Staufen like protein 2 OS=Pteropus alecto GN=PAL_GLEAN10019349 PE=4 SV=1
72 : M4A7K9_XIPMA 0.84 0.94 3 79 303 379 77 0 0 645 M4A7K9 Uncharacterized protein OS=Xiphophorus maculatus PE=4 SV=1
73 : L8HV98_9CETA 0.83 0.90 3 89 303 389 87 0 0 510 L8HV98 Double-stranded RNA-binding protein Staufen-like protein 2 (Fragment) OS=Bos mutus GN=M91_05813 PE=4 SV=1
74 : G1NG85_MELGA 0.80 0.91 3 89 388 474 87 0 0 633 G1NG85 Uncharacterized protein OS=Meleagris gallopavo GN=STAU2 PE=4 SV=2
75 : Q5ZL48_CHICK 0.80 0.92 3 87 375 459 85 0 0 472 Q5ZL48 Uncharacterized protein OS=Gallus gallus GN=RCJMB04_7n10 PE=2 SV=1
76 : R0JSC8_ANAPL 0.80 0.91 3 89 309 395 87 0 0 554 R0JSC8 Double-stranded RNA-binding protein Staufen-like protein 2 (Fragment) OS=Anas platyrhynchos GN=Anapl_06198 PE=4 SV=1
77 : U3IC06_ANAPL 0.80 0.91 3 89 390 476 87 0 0 635 U3IC06 Uncharacterized protein OS=Anas platyrhynchos GN=STAU2 PE=4 SV=1
78 : E6ZIM4_DICLA 0.79 0.90 3 86 303 386 84 0 0 618 E6ZIM4 Double-stranded RNA-binding protein Staufen homolog 2 OS=Dicentrarchus labrax GN=STAU2 PE=4 SV=1
79 : F1NCF1_CHICK 0.79 0.91 3 89 375 461 87 0 0 680 F1NCF1 Uncharacterized protein OS=Gallus gallus GN=STAU2 PE=4 SV=2
80 : H0ZMT5_TAEGU 0.79 0.90 3 89 303 389 87 0 0 570 H0ZMT5 Uncharacterized protein OS=Taeniopygia guttata GN=STAU2 PE=4 SV=1
81 : H2RW61_TAKRU 0.79 0.90 3 86 324 407 84 0 0 644 H2RW61 Uncharacterized protein OS=Takifugu rubripes GN=LOC101067203 PE=4 SV=1
82 : H2RW63_TAKRU 0.79 0.90 3 86 303 386 84 0 0 537 H2RW63 Uncharacterized protein OS=Takifugu rubripes GN=LOC101067203 PE=4 SV=1
83 : H2RW64_TAKRU 0.79 0.90 3 86 281 364 84 0 0 507 H2RW64 Uncharacterized protein (Fragment) OS=Takifugu rubripes GN=LOC101067203 PE=4 SV=1
84 : H3ADN8_LATCH 0.79 0.92 3 89 387 473 87 0 0 689 H3ADN8 Uncharacterized protein OS=Latimeria chalumnae PE=4 SV=2
85 : H3ADN9_LATCH 0.79 0.92 3 89 165 251 87 0 0 391 H3ADN9 Uncharacterized protein (Fragment) OS=Latimeria chalumnae PE=4 SV=1
86 : I3KA32_ORENI 0.79 0.92 3 86 386 469 84 0 0 648 I3KA32 Uncharacterized protein OS=Oreochromis niloticus GN=LOC100706911 PE=4 SV=1
87 : U3K1L3_FICAL 0.79 0.91 3 89 375 461 87 0 0 680 U3K1L3 Uncharacterized protein OS=Ficedula albicollis GN=STAU2 PE=4 SV=1
88 : K7F790_PELSI 0.78 0.92 3 89 338 424 87 0 0 583 K7F790 Uncharacterized protein OS=Pelodiscus sinensis GN=STAU2 PE=4 SV=1
89 : W5JYQ3_ASTMX 0.78 0.91 1 79 371 449 79 0 0 674 W5JYQ3 Uncharacterized protein OS=Astyanax mexicanus PE=4 SV=1
90 : G3NE60_GASAC 0.77 0.91 3 88 303 388 86 0 0 615 G3NE60 Uncharacterized protein OS=Gasterosteus aculeatus PE=4 SV=1
91 : H2LV35_ORYLA 0.77 0.90 3 86 303 386 84 0 0 563 H2LV35 Uncharacterized protein OS=Oryzias latipes GN=LOC101169247 PE=4 SV=1
92 : H2LV39_ORYLA 0.77 0.90 3 86 283 366 84 0 0 502 H2LV39 Uncharacterized protein (Fragment) OS=Oryzias latipes GN=LOC101169247 PE=4 SV=1
93 : H2RW65_TAKRU 0.77 0.90 3 88 375 460 86 0 0 472 H2RW65 Uncharacterized protein OS=Takifugu rubripes GN=LOC101067203 PE=4 SV=1
94 : F1QJT6_DANRE 0.76 0.91 3 89 375 461 87 0 0 678 F1QJT6 Double-stranded RNA-binding protein Staufen homolog 2 OS=Danio rerio GN=stau2 PE=4 SV=1
95 : H2RW62_TAKRU 0.76 0.90 3 89 303 389 87 0 0 627 H2RW62 Uncharacterized protein OS=Takifugu rubripes GN=LOC101067203 PE=4 SV=1
96 : STAU2_DANRE 0.76 0.91 3 89 303 389 87 0 0 606 Q7ZW47 Double-stranded RNA-binding protein Staufen homolog 2 OS=Danio rerio GN=stau2 PE=2 SV=2
97 : H2LV37_ORYLA 0.75 0.89 3 89 393 479 87 0 0 653 H2LV37 Uncharacterized protein OS=Oryzias latipes GN=LOC101169247 PE=4 SV=1
98 : V9KAB4_CALMI 0.75 0.90 3 89 366 452 87 0 0 680 V9KAB4 Staufen-like 2 OS=Callorhynchus milii PE=2 SV=1
99 : V9KRX3_CALMI 0.75 0.90 3 89 174 260 87 0 0 488 V9KRX3 Staufen-like 2 (Fragment) OS=Callorhynchus milii PE=2 SV=1
100 : G1KN39_ANOCA 0.74 0.89 3 89 366 452 87 0 0 573 G1KN39 Uncharacterized protein OS=Anolis carolinensis GN=STAU2 PE=4 SV=2
101 : F6SB91_XENTR 0.72 0.86 3 89 171 257 87 0 0 474 F6SB91 Double-stranded RNA-binding protein Staufen homolog 2 OS=Xenopus tropicalis GN=stau2 PE=4 SV=1
102 : G3WFA2_SARHA 0.72 0.86 8 88 73 153 81 0 0 306 G3WFA2 Uncharacterized protein OS=Sarcophilus harrisii GN=STAU2 PE=4 SV=1
103 : G5B9N5_HETGA 0.72 0.87 3 78 282 357 76 0 0 573 G5B9N5 Double-stranded RNA-binding protein Staufen-like protein 1 OS=Heterocephalus glaber GN=GW7_08258 PE=4 SV=1
104 : G5DY85_9PIPI 0.72 0.89 8 89 137 218 82 0 0 288 G5DY85 Putative double-stranded rna-binding protein staufen 2 (Fragment) OS=Hymenochirus curtipes PE=2 SV=1
105 : STAU2_XENTR 0.72 0.86 3 89 321 407 87 0 0 624 Q5M7M7 Double-stranded RNA-binding protein Staufen homolog 2 OS=Xenopus tropicalis GN=stau2 PE=2 SV=1
106 : A8K622_HUMAN 0.71 0.86 3 78 282 357 76 0 0 577 A8K622 cDNA FLJ75871, highly similar to Homo sapiens staufen, RNA binding protein (STAU), transcript variant T3, mRNA OS=Homo sapiens PE=2 SV=1
107 : B3KRE0_HUMAN 0.71 0.86 3 78 70 145 76 0 0 365 B3KRE0 cDNA FLJ34086 fis, clone FCBBF3005320, highly similar to Double-stranded RNA-binding protein Staufen homolog 1 OS=Homo sapiens PE=2 SV=1
108 : F6SBA1_XENTR 0.71 0.84 1 89 383 471 89 0 0 688 F6SBA1 Double-stranded RNA-binding protein Staufen homolog 2 OS=Xenopus tropicalis GN=stau2 PE=4 SV=1
109 : F7I2K9_CALJA 0.71 0.87 3 78 282 357 76 0 0 577 F7I2K9 Double-stranded RNA-binding protein Staufen homolog 1 isoform b OS=Callithrix jacchus GN=STAU1 PE=2 SV=1
110 : G1M524_AILME 0.71 0.86 1 78 378 455 78 0 0 700 G1M524 Double-stranded RNA-binding protein Staufen homolog 1 (Fragment) OS=Ailuropoda melanoleuca GN=STAU1 PE=4 SV=1
111 : G1R5L0_NOMLE 0.71 0.86 3 78 282 357 76 0 0 577 G1R5L0 Uncharacterized protein OS=Nomascus leucogenys GN=STAU1 PE=4 SV=1
112 : H0V5R8_CAVPO 0.71 0.87 3 78 278 353 76 0 0 569 H0V5R8 Uncharacterized protein (Fragment) OS=Cavia porcellus GN=STAU1 PE=4 SV=1
113 : H2P286_PONAB 0.71 0.86 3 78 281 356 76 0 0 576 H2P286 Uncharacterized protein OS=Pongo abelii GN=STAU1 PE=4 SV=1
114 : H2R200_PANTR 0.71 0.86 3 78 282 357 76 0 0 577 H2R200 Staufen, RNA binding protein, homolog 1 OS=Pan troglodytes GN=STAU1 PE=2 SV=1
115 : M3VWN3_FELCA 0.71 0.87 3 78 70 145 76 0 0 365 M3VWN3 Uncharacterized protein OS=Felis catus GN=STAU1 PE=4 SV=1
116 : Q59F99_HUMAN 0.71 0.86 3 78 296 371 76 0 0 591 Q59F99 Staufen isoform b variant (Fragment) OS=Homo sapiens PE=2 SV=1
117 : Q5JW30_HUMAN 0.71 0.86 3 78 199 274 76 0 0 494 Q5JW30 Double-stranded RNA-binding protein Staufen homolog 1 OS=Homo sapiens GN=STAU1 PE=2 SV=1
118 : Q5R657_PONAB 0.71 0.86 3 78 200 275 76 0 0 495 Q5R657 Putative uncharacterized protein DKFZp459A0124 OS=Pongo abelii GN=DKFZp459A0124 PE=2 SV=1
119 : Q7ZWR9_XENLA 0.71 0.87 1 89 383 471 89 0 0 685 Q7ZWR9 Stau2-a protein OS=Xenopus laevis GN=stau2 PE=2 SV=1
120 : STAU1_AILME 0.71 0.86 1 78 287 364 78 0 0 580 D2GVP7 Double-stranded RNA-binding protein Staufen homolog 1 OS=Ailuropoda melanoleuca GN=STAU1 PE=3 SV=1
121 : STAU1_HUMAN 4DKK 0.71 0.86 3 78 282 357 76 0 0 577 O95793 Double-stranded RNA-binding protein Staufen homolog 1 OS=Homo sapiens GN=STAU1 PE=1 SV=2
122 : U3CPK8_CALJA 0.71 0.87 3 78 288 363 76 0 0 583 U3CPK8 Double-stranded RNA-binding protein Staufen homolog 1 isoform b OS=Callithrix jacchus GN=STAU1 PE=2 SV=1
123 : U6D3Y6_NEOVI 0.71 0.87 1 78 31 108 78 0 0 324 U6D3Y6 Staufen protein T4 variant (Fragment) OS=Neovison vison GN=Q5JW29 PE=2 SV=1
124 : F7AER2_MACMU 0.70 0.87 3 78 207 282 76 0 0 502 F7AER2 Uncharacterized protein OS=Macaca mulatta GN=STAU1 PE=4 SV=1
125 : F7AFD5_MACMU 0.70 0.87 3 78 201 276 76 0 0 496 F7AFD5 Double-stranded RNA-binding protein Staufen homolog 1 isoform b OS=Macaca mulatta GN=STAU1 PE=2 SV=1
126 : F7BJQ7_HORSE 0.70 0.87 3 78 296 371 76 0 0 591 F7BJQ7 Uncharacterized protein (Fragment) OS=Equus caballus GN=STAU1 PE=4 SV=1
127 : G1SQK0_RABIT 0.70 0.87 3 78 282 357 76 0 0 577 G1SQK0 Uncharacterized protein OS=Oryctolagus cuniculus GN=STAU1 PE=4 SV=2
128 : G7N4K9_MACMU 0.70 0.87 3 78 282 357 76 0 0 573 G7N4K9 Double-stranded RNA-binding protein Staufen-like protein 1 OS=Macaca mulatta GN=EGK_02313 PE=4 SV=1
129 : G7PG21_MACFA 0.70 0.87 3 78 282 357 76 0 0 573 G7PG21 Double-stranded RNA-binding protein Staufen-like protein 1 OS=Macaca fascicularis GN=EGM_01993 PE=4 SV=1
130 : H0WK35_OTOGA 0.70 0.87 3 78 296 371 76 0 0 591 H0WK35 Uncharacterized protein (Fragment) OS=Otolemur garnettii GN=STAU1 PE=4 SV=1
131 : H9F8B3_MACMU 0.70 0.87 3 78 95 170 76 0 0 390 H9F8B3 Double-stranded RNA-binding protein Staufen homolog 1 isoform c (Fragment) OS=Macaca mulatta GN=STAU1 PE=2 SV=1
132 : H9YVP3_MACMU 0.70 0.87 3 78 282 357 76 0 0 577 H9YVP3 Double-stranded RNA-binding protein Staufen homolog 1 isoform b OS=Macaca mulatta GN=STAU1 PE=2 SV=1
133 : I3L9H8_PIG 0.70 0.87 3 78 112 187 76 0 0 407 I3L9H8 Uncharacterized protein (Fragment) OS=Sus scrofa GN=STAU1 PE=4 SV=1
134 : I7G2S2_MACFA 0.70 0.87 3 78 207 282 76 0 0 502 I7G2S2 Macaca fascicularis brain cDNA clone: QmoA-12017, similar to human staufen, RNA binding protein (Drosophila) (STAU),transcript variant T1, mRNA, RefSeq: NM_017454.1 OS=Macaca fascicularis PE=2 SV=1
135 : Q2VPF5_XENLA 0.70 0.85 1 89 384 472 89 0 0 689 Q2VPF5 Stau2-b protein OS=Xenopus laevis GN=stau2 PE=2 SV=1
136 : Q6DD72_XENLA 0.70 0.85 1 89 339 427 89 0 0 644 Q6DD72 Stau2-B-prov protein OS=Xenopus laevis GN=stau2-B-prov PE=2 SV=1
137 : S9XDA4_9CETA 0.70 0.87 3 78 184 259 76 0 0 501 S9XDA4 Double-stranded RNA-binding protein Staufen 1-like protein OS=Camelus ferus GN=CB1_000178023 PE=4 SV=1
138 : W5PRK6_SHEEP 0.70 0.86 3 78 296 371 76 0 0 591 W5PRK6 Uncharacterized protein (Fragment) OS=Ovis aries GN=STAU1 PE=4 SV=1
139 : G3SRZ9_LOXAF 0.69 0.85 3 80 214 291 78 0 0 509 G3SRZ9 Uncharacterized protein (Fragment) OS=Loxodonta africana GN=STAU1 PE=4 SV=1
140 : G9KRJ7_MUSPF 0.69 0.87 1 78 77 154 78 0 0 373 G9KRJ7 Staufen, RNA binding protein,-like protein 1 (Fragment) OS=Mustela putorius furo PE=2 SV=1
141 : I3M2M9_SPETR 0.69 0.83 1 78 399 476 78 0 0 720 I3M2M9 Uncharacterized protein (Fragment) OS=Spermophilus tridecemlineatus GN=STAU1 PE=4 SV=1
142 : L5K0J5_PTEAL 0.69 0.81 1 80 374 453 80 0 0 750 L5K0J5 Double-stranded RNA-binding protein Staufen like protein 1 OS=Pteropus alecto GN=PAL_GLEAN10024452 PE=4 SV=1
143 : M3Z1K6_MUSPF 0.69 0.87 1 78 378 455 78 0 0 671 M3Z1K6 Uncharacterized protein (Fragment) OS=Mustela putorius furo GN=STAU1 PE=4 SV=1
144 : S7PI31_MYOBR 0.69 0.83 1 78 374 451 78 0 0 696 S7PI31 Double-stranded RNA-binding protein Staufen like protein 1 OS=Myotis brandtii GN=D623_10026390 PE=4 SV=1
145 : A2A5R8_MOUSE 0.68 0.86 3 78 194 269 76 0 0 485 A2A5R8 Double-stranded RNA-binding protein Staufen homolog 1 OS=Mus musculus GN=Stau1 PE=4 SV=1
146 : A2A5S3_MOUSE 0.68 0.86 3 78 200 275 76 0 0 495 A2A5S3 Double-stranded RNA-binding protein Staufen homolog 1 OS=Mus musculus GN=Stau1 PE=4 SV=1
147 : A6QNY4_BOVIN 0.68 0.85 1 78 234 311 78 0 0 531 A6QNY4 STAU1 protein (Fragment) OS=Bos taurus GN=STAU1 PE=2 SV=1
148 : F1MH34_BOVIN 0.68 0.85 1 78 378 455 78 0 0 699 F1MH34 Uncharacterized protein (Fragment) OS=Bos taurus GN=STAU1 PE=4 SV=2
149 : F1Q1C5_CANFA 0.68 0.86 1 78 294 371 78 0 0 591 F1Q1C5 Uncharacterized protein (Fragment) OS=Canis familiaris GN=STAU1 PE=4 SV=2
150 : G1PBF6_MYOLU 0.68 0.83 1 78 294 371 78 0 0 591 G1PBF6 Uncharacterized protein (Fragment) OS=Myotis lucifugus GN=STAU1 PE=4 SV=1
151 : G3HES5_CRIGR 0.68 0.86 3 78 194 269 76 0 0 489 G3HES5 Double-stranded RNA-binding protein Staufen-like 1 OS=Cricetulus griseus GN=I79_009069 PE=4 SV=1
152 : H3B8X3_LATCH 0.68 0.83 1 77 383 459 77 0 0 715 H3B8X3 Uncharacterized protein OS=Latimeria chalumnae PE=4 SV=1
153 : H3B8X4_LATCH 0.68 0.83 1 77 402 478 77 0 0 723 H3B8X4 Uncharacterized protein (Fragment) OS=Latimeria chalumnae PE=4 SV=1
154 : J9P393_CANFA 0.68 0.86 1 78 381 458 78 0 0 678 J9P393 Uncharacterized protein OS=Canis familiaris GN=STAU1 PE=4 SV=1
155 : L5M6R0_MYODS 0.68 0.83 1 78 374 451 78 0 0 731 L5M6R0 Double-stranded RNA-binding protein Staufen like protein 1 OS=Myotis davidii GN=MDA_GLEAN10010596 PE=4 SV=1
156 : L8I955_9CETA 0.68 0.85 1 78 294 371 78 0 0 587 L8I955 Double-stranded RNA-binding protein Staufen-like protein 1 (Fragment) OS=Bos mutus GN=M91_11031 PE=4 SV=1
157 : Q3TJ07_MOUSE 0.68 0.86 3 78 282 357 76 0 0 577 Q3TJ07 Putative uncharacterized protein (Fragment) OS=Mus musculus GN=Stau1 PE=2 SV=1
158 : Q3TU43_MOUSE 0.68 0.86 3 78 288 363 76 0 0 583 Q3TU43 Putative uncharacterized protein (Fragment) OS=Mus musculus GN=Stau1 PE=2 SV=1
159 : Q3TWA1_MOUSE 0.68 0.86 3 78 292 367 76 0 0 587 Q3TWA1 Putative uncharacterized protein (Fragment) OS=Mus musculus GN=Stau1 PE=2 SV=1
160 : Q3TWP5_MOUSE 0.68 0.86 3 78 280 355 76 0 0 575 Q3TWP5 Putative uncharacterized protein (Fragment) OS=Mus musculus GN=Stau1 PE=2 SV=1
161 : Q3U7A6_MOUSE 0.68 0.86 3 78 194 269 76 0 0 485 Q3U7A6 Putative uncharacterized protein OS=Mus musculus GN=Stau1 PE=2 SV=1
162 : Q3U8D3_MOUSE 0.68 0.86 3 78 194 269 76 0 0 489 Q3U8D3 Putative uncharacterized protein OS=Mus musculus GN=Stau1 PE=2 SV=1
163 : Q3UTC8_MOUSE 0.68 0.86 3 78 284 359 76 0 0 579 Q3UTC8 Putative uncharacterized protein (Fragment) OS=Mus musculus GN=Stau1 PE=2 SV=1
164 : Q641P2_MOUSE 0.68 0.86 3 78 281 356 76 0 0 576 Q641P2 Stau1 protein (Fragment) OS=Mus musculus GN=Stau1 PE=2 SV=1
165 : Q66HP4_RAT 0.68 0.87 3 78 259 334 76 0 0 554 Q66HP4 Stau1 protein (Fragment) OS=Rattus norvegicus GN=Stau1 PE=2 SV=1
166 : Q6TNG5_MOUSE 0.68 0.86 3 78 200 275 76 0 0 436 Q6TNG5 Staufen OS=Mus musculus GN=Stau1 PE=2 SV=1
167 : Q9DBE7_MOUSE 0.68 0.86 3 78 194 269 76 0 0 489 Q9DBE7 Double-stranded RNA-binding protein Staufen homolog 1 OS=Mus musculus GN=Stau1 PE=2 SV=1
168 : Q9ESY8_RAT 0.68 0.87 3 78 194 269 76 0 0 489 Q9ESY8 Stau1 protein OS=Rattus norvegicus GN=Stau1 PE=2 SV=1
169 : Q9ET50_RAT 0.68 0.87 3 78 200 275 76 0 0 495 Q9ET50 Protein Stau1 OS=Rattus norvegicus GN=Stau1 PE=2 SV=1
170 : STAU1_MOUSE 0.68 0.86 3 78 192 267 76 0 0 487 Q9Z108 Double-stranded RNA-binding protein Staufen homolog 1 OS=Mus musculus GN=Stau1 PE=2 SV=1
171 : V9GX87_MOUSE 0.68 0.86 3 78 200 275 76 0 0 436 V9GX87 Double-stranded RNA-binding protein Staufen homolog 1 OS=Mus musculus GN=Stau1 PE=4 SV=1
172 : W5PRK4_SHEEP 0.68 0.83 1 78 374 451 78 0 0 671 W5PRK4 Uncharacterized protein OS=Ovis aries GN=STAU1 PE=4 SV=1
173 : F6SHZ5_MONDO 0.67 0.85 5 88 106 189 84 0 0 311 F6SHZ5 Uncharacterized protein (Fragment) OS=Monodelphis domestica GN=STAU2 PE=4 SV=2
174 : L9LD94_TUPCH 0.67 0.85 1 78 201 278 78 0 0 632 L9LD94 Double-stranded RNA-binding protein Staufen like protein 1 OS=Tupaia chinensis GN=TREES_T100008565 PE=4 SV=1
175 : Q3UKX3_MOUSE 0.67 0.85 1 78 295 372 78 0 0 592 Q3UKX3 Putative uncharacterized protein (Fragment) OS=Mus musculus GN=Stau1 PE=2 SV=1
176 : F7INW0_CALJA 0.66 0.84 3 84 201 282 82 0 0 493 F7INW0 Uncharacterized protein OS=Callithrix jacchus GN=STAU1 PE=4 SV=1
177 : H3CRX3_TETNG 0.66 0.80 3 85 336 418 83 0 0 568 H3CRX3 Uncharacterized protein (Fragment) OS=Tetraodon nigroviridis PE=4 SV=1
178 : F7AUP1_MONDO 0.65 0.82 1 78 372 449 78 0 0 669 F7AUP1 Uncharacterized protein OS=Monodelphis domestica GN=STAU1 PE=4 SV=2
179 : G3W6G1_SARHA 0.65 0.82 1 78 372 449 78 0 0 669 G3W6G1 Uncharacterized protein OS=Sarcophilus harrisii GN=STAU1 PE=4 SV=1
180 : G3W6G2_SARHA 0.65 0.82 1 78 292 369 78 0 0 589 G3W6G2 Uncharacterized protein (Fragment) OS=Sarcophilus harrisii GN=STAU1 PE=4 SV=1
181 : F1NHD1_CHICK 0.64 0.81 1 80 337 416 80 0 0 657 F1NHD1 Uncharacterized protein OS=Gallus gallus GN=STAU1 PE=4 SV=2
182 : F1NHE0_CHICK 0.64 0.81 1 80 376 455 80 0 0 712 F1NHE0 Uncharacterized protein OS=Gallus gallus GN=STAU1 PE=4 SV=2
183 : G1KRV7_ANOCA 0.64 0.81 1 80 380 459 80 0 0 699 G1KRV7 Uncharacterized protein OS=Anolis carolinensis GN=STAU1 PE=4 SV=2
184 : G1MZS7_MELGA 0.64 0.81 1 80 376 455 80 0 0 712 G1MZS7 Uncharacterized protein OS=Meleagris gallopavo GN=STAU1 PE=4 SV=1
185 : K7FV25_PELSI 0.64 0.81 1 80 374 453 80 0 0 694 K7FV25 Uncharacterized protein OS=Pelodiscus sinensis GN=STAU1 PE=4 SV=1
186 : M7BUJ0_CHEMY 0.64 0.81 1 80 374 453 80 0 0 666 M7BUJ0 Double-stranded RNA-binding protein Staufen like protein 1 (Fragment) OS=Chelonia mydas GN=UY3_06985 PE=4 SV=1
187 : Q5ZHY4_CHICK 0.64 0.81 1 80 376 455 80 0 0 712 Q5ZHY4 Uncharacterized protein OS=Gallus gallus GN=RCJMB04_32c1 PE=2 SV=1
188 : R0K108_ANAPL 0.64 0.81 1 80 376 455 80 0 0 712 R0K108 Double-stranded RNA-binding protein Staufen-like protein 1 (Fragment) OS=Anas platyrhynchos GN=STAU1 PE=4 SV=1
189 : U3FBH5_MICFL 0.64 0.81 1 80 372 451 80 0 0 691 U3FBH5 Double-stranded RNA-binding protein OS=Micrurus fulvius PE=2 SV=1
190 : U3KEQ2_FICAL 0.64 0.81 1 80 370 449 80 0 0 690 U3KEQ2 Uncharacterized protein OS=Ficedula albicollis GN=STAU1 PE=4 SV=1
191 : V8NQL5_OPHHA 0.64 0.81 1 80 373 452 80 0 0 692 V8NQL5 Double-stranded RNA-binding protein Staufen-like 1 OS=Ophiophagus hannah GN=STAU1 PE=4 SV=1
192 : V9KI15_CALMI 0.64 0.81 1 80 365 444 80 0 0 695 V9KI15 Double-stranded RNA-binding protein Staufen-like 1-like protein OS=Callorhynchus milii PE=2 SV=1
193 : C0PUG3_SALSA 0.62 0.81 3 80 88 165 78 0 0 416 C0PUG3 Double-stranded RNA-binding protein Staufen homolog 1 (Fragment) OS=Salmo salar GN=STAU1 PE=2 SV=1
194 : R4WDR9_9HEMI 0.62 0.81 1 79 427 505 79 0 0 714 R4WDR9 Staufen OS=Riptortus pedestris PE=2 SV=1
195 : V5H8C5_IXORI 0.62 0.76 8 79 349 420 72 0 0 604 V5H8C5 Putative staufen rna binding protein (Fragment) OS=Ixodes ricinus PE=2 SV=1
196 : W5M5P3_LEPOC 0.62 0.82 1 80 375 454 80 0 0 694 W5M5P3 Uncharacterized protein (Fragment) OS=Lepisosteus oculatus PE=4 SV=1
197 : W5M5R2_LEPOC 0.62 0.82 1 80 371 450 80 0 0 690 W5M5R2 Uncharacterized protein OS=Lepisosteus oculatus PE=4 SV=1
198 : F1Q5V4_DANRE 0.61 0.80 1 80 369 448 80 0 0 690 F1Q5V4 Uncharacterized protein OS=Danio rerio GN=stau1 PE=4 SV=1
199 : F1QTC1_DANRE 0.61 0.80 1 80 315 394 80 0 0 636 F1QTC1 Uncharacterized protein OS=Danio rerio GN=stau1 PE=4 SV=1
200 : G3N8X1_GASAC 0.61 0.79 1 80 368 447 80 0 0 687 G3N8X1 Uncharacterized protein OS=Gasterosteus aculeatus PE=4 SV=1
201 : G3N8X4_GASAC 0.61 0.79 1 80 380 459 80 0 0 715 G3N8X4 Uncharacterized protein OS=Gasterosteus aculeatus PE=4 SV=1
202 : H2MXL0_ORYLA 0.61 0.79 1 80 316 395 80 0 0 607 H2MXL0 Uncharacterized protein OS=Oryzias latipes GN=LOC101155321 PE=4 SV=1
203 : H2MXL4_ORYLA 0.61 0.79 1 80 278 357 80 0 0 566 H2MXL4 Uncharacterized protein OS=Oryzias latipes GN=LOC101155321 PE=4 SV=1
204 : H2SP90_TAKRU 0.61 0.79 1 80 245 324 80 0 0 539 H2SP90 Uncharacterized protein (Fragment) OS=Takifugu rubripes GN=LOC101079391 PE=4 SV=1
205 : H2SP91_TAKRU 0.61 0.79 1 80 396 475 80 0 0 714 H2SP91 Uncharacterized protein OS=Takifugu rubripes GN=LOC101079391 PE=4 SV=1
206 : H2SP92_TAKRU 0.61 0.79 1 80 282 361 80 0 0 576 H2SP92 Uncharacterized protein OS=Takifugu rubripes GN=LOC101079391 PE=4 SV=1
207 : H2SP93_TAKRU 0.61 0.79 1 80 315 394 80 0 0 600 H2SP93 Uncharacterized protein OS=Takifugu rubripes GN=LOC101079391 PE=4 SV=1
208 : H2SP94_TAKRU 0.61 0.79 1 80 306 385 80 0 0 579 H2SP94 Uncharacterized protein OS=Takifugu rubripes GN=LOC101079391 PE=4 SV=1
209 : H3DB76_TETNG 0.61 0.79 1 80 357 436 80 0 0 676 H3DB76 Uncharacterized protein (Fragment) OS=Tetraodon nigroviridis PE=4 SV=1
210 : I3J8P0_ORENI 0.61 0.79 1 80 403 482 80 0 0 722 I3J8P0 Uncharacterized protein (Fragment) OS=Oreochromis niloticus GN=LOC100704167 PE=4 SV=1
211 : M4AP22_XIPMA 0.61 0.79 1 80 378 457 80 0 0 697 M4AP22 Uncharacterized protein OS=Xiphophorus maculatus PE=4 SV=1
212 : Q4RXD0_TETNG 0.61 0.79 1 80 375 454 80 0 0 665 Q4RXD0 Chromosome 11 SCAF14979, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00027465001 PE=4 SV=1
213 : Q6P114_DANRE 0.61 0.80 1 80 315 394 80 0 0 636 Q6P114 Staufen, RNA binding protein, homolog 1 (Drosophila) OS=Danio rerio GN=stau1 PE=2 SV=1
214 : S4RG62_PETMA 0.61 0.83 1 87 309 396 88 1 1 612 S4RG62 Uncharacterized protein (Fragment) OS=Petromyzon marinus PE=4 SV=1
215 : W5LBU5_ASTMX 0.61 0.80 1 80 376 455 80 0 0 693 W5LBU5 Uncharacterized protein OS=Astyanax mexicanus PE=4 SV=1
216 : F6XDZ1_ORNAN 0.60 0.82 1 80 380 459 80 0 0 701 F6XDZ1 Uncharacterized protein OS=Ornithorhynchus anatinus GN=STAU1 PE=4 SV=2
217 : K7J570_NASVI 0.60 0.77 1 80 298 377 80 0 0 587 K7J570 Uncharacterized protein OS=Nasonia vitripennis PE=4 SV=1
218 : L7LXA4_9ACAR 0.60 0.79 8 89 365 446 82 0 0 652 L7LXA4 Putative staufen rna binding protein log 2 OS=Rhipicephalus pulchellus PE=2 SV=1
219 : T1I149_RHOPR 0.60 0.79 1 80 303 382 80 0 0 572 T1I149 Uncharacterized protein (Fragment) OS=Rhodnius prolixus PE=4 SV=1
220 : B5X2Y1_SALSA 0.59 0.76 1 85 375 459 85 0 0 701 B5X2Y1 Double-stranded RNA-binding protein Staufen homolog 1 OS=Salmo salar GN=STAU1 PE=2 SV=1
221 : H0ZES0_TAEGU 0.59 0.77 1 80 376 456 81 1 1 714 H0ZES0 Uncharacterized protein OS=Taeniopygia guttata GN=STAU1 PE=4 SV=1
222 : K1RF87_CRAGI 0.59 0.81 1 80 455 534 80 0 0 695 K1RF87 Double-stranded RNA-binding protein Staufen-like protein 2 OS=Crassostrea gigas GN=CGI_10015882 PE=4 SV=1
223 : E9H109_DAPPU 0.58 0.75 7 74 457 525 69 1 1 694 E9H109 Putative uncharacterized protein OS=Daphnia pulex GN=DAPPUDRAFT_324210 PE=4 SV=1
224 : F6XG32_XENTR 0.58 0.78 1 89 375 463 89 0 0 696 F6XG32 Uncharacterized protein OS=Xenopus tropicalis GN=stau1 PE=4 SV=1
225 : F6XG62_XENTR 0.58 0.78 1 89 398 486 89 0 0 719 F6XG62 Uncharacterized protein OS=Xenopus tropicalis GN=stau1 PE=4 SV=1
226 : N6U8A9_DENPD 0.58 0.74 1 78 493 570 78 0 0 741 N6U8A9 Uncharacterized protein (Fragment) OS=Dendroctonus ponderosae GN=YQE_06727 PE=4 SV=1
227 : Q0IHZ5_XENTR 0.58 0.78 1 89 365 453 89 0 0 686 Q0IHZ5 Stau1 protein OS=Xenopus tropicalis GN=stau1 PE=2 SV=1
228 : Q28HT0_XENTR 0.58 0.78 1 89 375 463 89 0 0 696 Q28HT0 Novel protein similar to staufen OS=Xenopus tropicalis GN=stau1 PE=2 SV=1
229 : Q5MNU4_XENLA 0.58 0.78 1 89 398 486 89 0 0 718 Q5MNU4 Staufen 1 OS=Xenopus laevis GN=stau1 PE=2 SV=1
230 : Q6GM35_XENLA 0.58 0.78 1 89 388 476 89 0 0 708 Q6GM35 Stau1 protein OS=Xenopus laevis GN=stau1 PE=2 SV=1
231 : Q6JPI2_XENLA 0.58 0.78 1 89 392 480 89 0 0 712 Q6JPI2 Staufen OS=Xenopus laevis GN=Stau PE=2 SV=1
232 : U4UWF6_DENPD 0.58 0.74 1 78 462 539 78 0 0 710 U4UWF6 Uncharacterized protein OS=Dendroctonus ponderosae GN=D910_11901 PE=4 SV=1
233 : U4UWI0_DENPD 0.58 0.74 1 78 526 603 78 0 0 774 U4UWI0 Uncharacterized protein OS=Dendroctonus ponderosae GN=D910_11901 PE=4 SV=1
234 : C0H9Z4_SALSA 0.57 0.76 1 84 376 459 84 0 0 706 C0H9Z4 Double-stranded RNA-binding protein Staufen homolog 1 OS=Salmo salar GN=STAU1 PE=2 SV=1
235 : R7TS93_CAPTE 0.57 0.76 1 84 404 487 84 0 0 720 R7TS93 Uncharacterized protein OS=Capitella teleta GN=CAPTEDRAFT_152167 PE=4 SV=1
236 : U5ENL2_9DIPT 0.57 0.75 7 89 660 742 83 0 0 966 U5ENL2 Putative staufen (Fragment) OS=Corethrella appendiculata PE=2 SV=1
237 : E4YMN6_OIKDI 0.56 0.77 6 78 403 475 73 0 0 596 E4YMN6 Whole genome shotgun assembly, allelic scaffold set, scaffold scaffoldA_560 OS=Oikopleura dioica GN=GSOID_T00029780001 PE=4 SV=1
238 : E2A715_CAMFO 0.55 0.77 1 80 335 414 80 0 0 607 E2A715 Double-stranded RNA-binding protein Staufen-like protein 2 OS=Camponotus floridanus GN=EAG_04722 PE=4 SV=1
239 : E2B6M9_HARSA 0.55 0.77 1 80 524 603 80 0 0 797 E2B6M9 Double-stranded RNA-binding protein Staufen-like protein 2 OS=Harpegnathos saltator GN=EAI_10915 PE=4 SV=1
240 : E2QDA4_APLCA 0.55 0.74 1 80 352 431 80 0 0 618 E2QDA4 Staufen OS=Aplysia californica PE=2 SV=1
241 : E9IE48_SOLIN 0.55 0.77 1 80 530 609 80 0 0 804 E9IE48 Putative uncharacterized protein (Fragment) OS=Solenopsis invicta GN=SINV_10966 PE=4 SV=1
242 : F4W478_ACREC 0.55 0.77 1 80 530 609 80 0 0 804 F4W478 Double-stranded RNA-binding protein Staufen-like protein 2 OS=Acromyrmex echinatior GN=G5I_00183 PE=4 SV=1
243 : H6VUG7_9HEMI 0.55 0.76 1 80 469 548 80 0 0 743 H6VUG7 Stau OS=Laodelphax striatella PE=2 SV=1
244 : H9K9R8_APIME 0.55 0.77 1 80 507 586 80 0 0 780 H9K9R8 Uncharacterized protein OS=Apis mellifera GN=stau PE=4 SV=1
245 : Q3L1C9_APLCA 0.55 0.74 1 80 684 763 80 0 0 950 Q3L1C9 Neuron-specific staufen OS=Aplysia californica PE=2 SV=1
246 : V5GT21_ANOGL 0.55 0.73 1 84 475 558 84 0 0 753 V5GT21 Double-stranded RNA-binding protein OS=Anoplophora glabripennis GN=STAU2 PE=4 SV=1
247 : V9IDS9_APICE 0.55 0.77 1 80 506 585 80 0 0 758 V9IDS9 Double-stranded RNA-binding protein Staufen 2 OS=Apis cerana GN=ACCB01447.2 PE=2 SV=1
248 : V9IEC2_APICE 0.55 0.77 1 80 506 585 80 0 0 779 V9IEC2 Double-stranded RNA-binding protein Staufen 2 OS=Apis cerana GN=ACCB01447.1 PE=2 SV=1
249 : W4W270_ATTCE 0.55 0.77 1 80 510 589 80 0 0 784 W4W270 Uncharacterized protein OS=Atta cephalotes PE=4 SV=1
250 : D6W7Y5_TRICA 0.54 0.66 1 89 450 538 89 0 0 724 D6W7Y5 Staufen OS=Tribolium castaneum GN=stau PE=4 SV=1
251 : V4B744_LOTGI 0.54 0.78 3 78 310 385 76 0 0 385 V4B744 Uncharacterized protein (Fragment) OS=Lottia gigantea GN=LOTGIDRAFT_82984 PE=4 SV=1
252 : B7PFD0_IXOSC 0.53 0.68 1 87 365 451 87 0 0 651 B7PFD0 Staufen, putative (Fragment) OS=Ixodes scapularis GN=IscW_ISCW004051 PE=4 SV=1
253 : E0W4A3_PEDHC 0.49 0.74 3 84 443 524 82 0 0 767 E0W4A3 Staufen, putative OS=Pediculus humanus subsp. corporis GN=Phum_PHUM616960 PE=4 SV=1
254 : H2PQK3_PONAB 0.49 0.65 1 89 301 388 89 1 1 607 H2PQK3 Uncharacterized protein OS=Pongo abelii GN=STAU2 PE=4 SV=2
255 : Q7PT34_ANOGA 0.49 0.67 1 80 872 953 82 1 2 1149 Q7PT34 AGAP007478-PA OS=Anopheles gambiae GN=AGAP007478 PE=4 SV=4
256 : W5M7R9_LEPOC 0.49 0.66 4 88 377 462 86 1 1 620 W5M7R9 Uncharacterized protein OS=Lepisosteus oculatus PE=4 SV=1
257 : G6DTP8_DANPL 0.48 0.69 1 80 182 261 80 0 0 450 G6DTP8 Staufen OS=Danaus plexippus GN=KGM_12765 PE=4 SV=1
258 : H2VI67_CAEJA 0.47 0.76 1 75 319 393 75 0 0 607 H2VI67 Uncharacterized protein OS=Caenorhabditis japonica GN=WBGene00120122 PE=4 SV=2
259 : J9EDN5_WUCBA 0.47 0.71 1 75 260 335 76 1 1 465 J9EDN5 Double-stranded RNA binding protein (Fragment) OS=Wuchereria bancrofti GN=WUBG_08530 PE=4 SV=1
260 : W4Z4Z6_STRPU 0.47 0.63 5 79 564 646 83 1 8 879 W4Z4Z6 Uncharacterized protein OS=Strongylocentrotus purpuratus GN=Sp-Staufen1 PE=4 SV=1
261 : A7SHZ5_NEMVE 0.46 0.68 1 80 335 414 80 0 0 423 A7SHZ5 Predicted protein OS=Nematostella vectensis GN=v1g190042 PE=4 SV=1
262 : A8PS78_BRUMA 0.46 0.69 1 80 439 519 81 1 1 790 A8PS78 Double-stranded RNA binding motif family protein OS=Brugia malayi GN=Bm1_33085 PE=4 SV=1
263 : B4LJX4_DROVI 0.46 0.70 1 74 778 853 76 1 2 1100 B4LJX4 Stau OS=Drosophila virilis GN=stau PE=4 SV=1
264 : F1KSR8_ASCSU 0.46 0.70 1 80 467 547 81 1 1 906 F1KSR8 Double-stranded RNA-binding protein Staufen OS=Ascaris suum PE=2 SV=1
265 : Q9NHD3_DROVI 0.46 0.70 1 74 735 810 76 1 2 1062 Q9NHD3 Staufen OS=Drosophila virilis GN=stau PE=4 SV=1
266 : RNC_CHLAD 0.46 0.68 6 74 160 228 69 0 0 229 B8GAM6 Ribonuclease 3 OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=rnc PE=3 SV=1
267 : U6NW80_HAECO 0.46 0.72 2 80 480 558 79 0 0 839 U6NW80 Double-stranded RNA binding domain containing protein OS=Haemonchus contortus GN=HCOI_00569300 PE=4 SV=1
268 : W4Y2Y4_STRPU 0.46 0.63 5 79 411 493 83 1 8 727 W4Y2Y4 Uncharacterized protein OS=Strongylocentrotus purpuratus GN=Sp-Staufen2 PE=4 SV=1
269 : B4GBD9_DROPE 0.45 0.68 1 74 342 417 76 1 2 638 B4GBD9 GL10536 OS=Drosophila persimilis GN=Dper\GL10536 PE=4 SV=1
270 : B4HNC0_DROSE 0.45 0.70 1 74 707 782 76 1 2 1035 B4HNC0 GM19927 OS=Drosophila sechellia GN=Dsec\GM19927 PE=4 SV=1
271 : B4KNT3_DROMO 0.45 0.67 1 74 755 830 76 1 2 1100 B4KNT3 GI19273 OS=Drosophila mojavensis GN=Dmoj\GI19273 PE=4 SV=1
272 : B4MYL8_DROWI 0.45 0.67 1 74 777 852 76 1 2 1106 B4MYL8 GK22054 OS=Drosophila willistoni GN=Dwil\GK22054 PE=4 SV=1
273 : B4QBV2_DROSI 0.45 0.70 1 74 707 782 76 1 2 1035 B4QBV2 GD25416 OS=Drosophila simulans GN=Dsim\GD25416 PE=4 SV=1
274 : E1JGK6_DROME 0.45 0.70 1 74 705 780 76 1 2 1025 E1JGK6 Staufen, isoform C OS=Drosophila melanogaster GN=stau PE=4 SV=1
275 : Q290Q6_DROPS 0.45 0.68 1 74 712 787 76 1 2 1008 Q290Q6 GA19106 OS=Drosophila pseudoobscura pseudoobscura GN=Dpse\GA19106 PE=4 SV=2
276 : STAU_DROME 1EKZ 0.45 0.70 1 74 705 780 76 1 2 1026 P25159 Maternal effect protein staufen OS=Drosophila melanogaster GN=stau PE=1 SV=2
277 : V9HW54_HUMAN 0.45 0.70 1 74 705 780 76 1 2 1026 V9HW54 Epididymis luminal protein 123 OS=Homo sapiens GN=HEL-123 PE=2 SV=1
278 : W5JT98_ANODA 0.45 0.61 7 87 645 727 83 1 2 934 W5JT98 Uncharacterized protein OS=Anopheles darlingi GN=AND_002263 PE=4 SV=1
279 : J0XK69_LOALO 0.44 0.69 1 80 499 579 81 1 1 869 J0XK69 Double-stranded RNA binding domain-containing protein family protein OS=Loa loa GN=LOAG_16985 PE=4 SV=1
280 : J9K584_ACYPI 0.44 0.72 4 77 321 395 75 1 1 574 J9K584 Uncharacterized protein OS=Acyrthosiphon pisum PE=4 SV=1
281 : B4J9H0_DROGR 0.43 0.66 1 80 733 814 82 1 2 1053 B4J9H0 GH20445 OS=Drosophila grimshawi GN=Dgri\GH20445 PE=4 SV=1
282 : A8X5Q8_CAEBR 0.41 0.65 1 80 392 471 80 0 0 693 A8X5Q8 Protein CBG08071 OS=Caenorhabditis briggsae GN=CBG08071 PE=4 SV=2
283 : B3MHU6_DROAN 0.41 0.65 1 83 720 804 85 1 2 1036 B3MHU6 GF13203 OS=Drosophila ananassae GN=Dana\GF13203 PE=4 SV=1
284 : B3NLP2_DROER 0.41 0.68 1 83 706 790 85 1 2 1034 B3NLP2 GG20993 OS=Drosophila erecta GN=Dere\GG20993 PE=4 SV=1
285 : B4P4R9_DROYA 0.41 0.68 1 83 709 793 85 1 2 1037 B4P4R9 GE13936 OS=Drosophila yakuba GN=Dyak\GE13936 PE=4 SV=1
286 : Q94239_CAEEL 0.41 0.71 2 80 408 486 79 0 0 705 Q94239 Protein STAU-1 OS=Caenorhabditis elegans GN=stau-1 PE=4 SV=1
287 : E3MA22_CAERE 0.39 0.70 2 84 400 482 83 0 0 725 E3MA22 Putative uncharacterized protein OS=Caenorhabditis remanei GN=CRE_17085 PE=4 SV=1
288 : G0N7P1_CAEBE 0.39 0.70 2 80 389 467 79 0 0 713 G0N7P1 CBN-STAU-1 protein OS=Caenorhabditis brenneri GN=Cbn-stau-1 PE=4 SV=1
289 : Q9NHD2_MUSDO 0.39 0.65 4 80 721 800 80 1 3 985 Q9NHD2 Staufen OS=Musca domestica PE=4 SV=1
290 : J8TRN9_BACAO 0.37 0.70 10 79 193 263 71 1 1 263 J8TRN9 Ribonuclease 3 OS=Bacillus alcalophilus ATCC 27647 GN=rnc PE=3 SV=1
291 : B9VM95_FENCH 0.36 0.58 1 73 123 195 73 0 0 323 B9VM95 TAR RNA-binding protein 2 isoform 2 OS=Fenneropenaeus chinensis GN=TRBP2 PE=2 SV=1
292 : B9VM96_FENCH 0.36 0.58 1 73 123 195 73 0 0 296 B9VM96 TAR RNA-binding protein 2 isoform 3 OS=Fenneropenaeus chinensis GN=TRBP2 PE=2 SV=1
293 : C3S7J5_FENCH 0.36 0.58 1 73 123 195 73 0 0 343 C3S7J5 TAR RNA-binding protein 2 OS=Fenneropenaeus chinensis PE=2 SV=1
294 : F4YXI0_PENJP 0.36 0.58 1 73 123 195 73 0 0 343 F4YXI0 TAR RNA-binding protein isoform 1 OS=Penaeus japonicus PE=2 SV=1
295 : F4YXI1_PENJP 0.36 0.58 1 73 123 195 73 0 0 323 F4YXI1 TAR RNA-binding protein isoform 2 OS=Penaeus japonicus PE=2 SV=1
296 : F4YXI2_PENJP 0.36 0.58 1 73 123 195 73 0 0 296 F4YXI2 TAR RNA-binding protein isoform 3 OS=Penaeus japonicus PE=2 SV=1
297 : F5AW41_LITVA 0.36 0.58 1 73 123 195 73 0 0 343 F5AW41 TRBP1 OS=Litopenaeus vannamei PE=2 SV=1
298 : L7XFX3_PENMO 0.36 0.58 1 73 123 195 73 0 0 343 L7XFX3 TAR RNA-binding protein 1 OS=Penaeus monodon GN=TRBP1 PE=2 SV=1
299 : U1NF27_ASCSU 0.36 0.56 1 80 489 577 89 2 9 915 U1NF27 Double-stranded rna-binding protein staufen-like protein 2 OS=Ascaris suum GN=ASU_12251 PE=4 SV=1
300 : W5QM69_PENMO 0.36 0.58 1 73 123 195 73 0 0 323 W5QM69 Loquacious OS=Penaeus monodon GN=Loq PE=2 SV=1
301 : B8KFV6_9GAMM 0.33 0.58 8 74 154 222 69 1 2 224 B8KFV6 Ribonuclease 3 OS=gamma proteobacterium NOR5-3 GN=rnc PE=3 SV=1
## ALIGNMENTS 1 - 70
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A G 0 0 126 129 23
2 2 A S - 0 0 92 133 82
3 3 A S - 0 0 95 270 23 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
4 4 A G S S+ 0 0 65 273 48 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
5 5 A S S S- 0 0 121 276 45 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
6 6 A S S S+ 0 0 124 278 57 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMM
7 7 A G > - 0 0 21 281 6 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
8 8 A P H > S+ 0 0 27 301 1 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
9 9 A I H >> S+ 0 0 33 301 11 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
10 10 A S H 3> S+ 0 0 33 302 23 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
11 11 A R H 3X S+ 0 0 100 302 25 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
12 12 A L H XX S+ 0 0 0 302 1 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
13 13 A A H 3X S+ 0 0 21 302 60 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
14 14 A Q H 3X S+ 0 0 108 302 12 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
15 15 A I H S+ 0 0 1 302 41 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
17 17 A Q H ><5S+ 0 0 121 302 14 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
18 18 A A H 3<5S+ 0 0 79 302 20 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
19 19 A R T 3<5S- 0 0 123 302 28 RKKKRKKKKKKKKKKRRRRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
20 20 A K T < 5S+ 0 0 188 302 22 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
21 21 A E S S+ 0 0 95 302 37 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
36 36 A R T 3 S+ 0 0 194 302 17 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
37 37 A R T 3 S- 0 0 186 302 36 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
38 38 A R < - 0 0 101 302 12 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
39 39 A E E -A 32 0A 106 302 14 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
40 40 A F E -AB 31 55A 42 302 3 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
41 41 A V E -AB 30 54A 46 302 26 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVM
42 42 A M E -AB 28 53A 15 302 23 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMM
43 43 A Q E -AB 27 52A 49 302 36 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
44 44 A V E -AB 26 51A 0 302 20 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
45 45 A K E +AB 25 50A 110 302 61 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
46 46 A V E > - B 0 49A 5 302 39 VVVVVVIVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
47 47 A G T 3 S- 0 0 64 302 36 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
48 48 A N T 3 S+ 0 0 150 302 60 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
49 49 A E E < -B 46 0A 79 302 73 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
50 50 A V E +B 45 0A 61 301 76 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
51 51 A A E -B 44 0A 7 302 38 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
52 52 A T E -B 43 0A 69 302 75 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
53 53 A G E -B 42 0A 2 302 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
54 54 A T E +B 41 0A 63 302 62 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
55 55 A G E -B 40 0A 11 302 1 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
56 56 A P S S+ 0 0 52 302 59 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
57 57 A N S > S- 0 0 62 302 36 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
58 58 A K H > S+ 0 0 84 302 1 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
59 59 A K H >> S+ 0 0 133 302 3 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
60 60 A I H 3> S+ 0 0 53 302 46 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
61 61 A A H 3X S+ 0 0 0 302 1 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
62 62 A K H S+ 0 0 7 302 15 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
71 71 A L H <5S+ 0 0 55 302 81 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
72 72 A Q H <5S+ 0 0 91 302 81 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
73 73 A L H <5S- 0 0 42 302 7 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
74 74 A G T <5S+ 0 0 45 293 14 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
75 75 A Y S S+ 0 0 88 277 50 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
77 77 A A H > S+ 0 0 33 277 81 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
78 78 A S H > S+ 0 0 92 274 49 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
79 79 A T H > S+ 0 0 84 204 76 TTTTSTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
80 80 A S H X S+ 0 0 54 197 62 SSSNNNSSSSNNNNNSSSSSSSSSSSSSSSSSSSSNNNNNNNNNNNNNNNNNNNNNNNSNNNNNNNNNNN
81 81 A L H X S+ 0 0 117 134 83 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
82 82 A Q H < S+ 0 0 135 134 58 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
83 83 A D H < S+ 0 0 149 134 61 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
84 84 A S H < S- 0 0 114 124 65 QQQQQQQQPPPQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQP
85 85 A G < - 0 0 24 118 88 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
86 86 A P + 0 0 118 116 64 DDDEEDDEDDDDDDDDDDDDDDDDDDDDEEEEEDDDEEEEEEEEEEEEEEEDEEEEEDDDDED
87 87 A S - 0 0 112 109 18 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
88 88 A S 0 0 132 105 53 TTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTK
89 89 A G 0 0 123 99 35 GG GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
## ALIGNMENTS 71 - 140
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....8....:....9....:....0....:....1....:....2....:....3....:....4
1 1 A G 0 0 126 129 23 E E D ED D EE D
2 2 A S - 0 0 92 133 82 Y Y C YC S YY N
3 3 A S - 0 0 95 270 23 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG G GGGGGSGGGGGGGGGSGGGGGGGGGGGGGGGGGGGG
4 4 A G S S+ 0 0 65 273 48 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ Q QQQQQQQQQQQQQQQQQQPQQQQQQQQQQQQQQQQP
5 5 A S S S- 0 0 121 276 45 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG G GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
6 6 A S S S+ 0 0 124 278 57 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMM M MIIMIMIMIIMIIIMMIIMIIMMIIIIIMIMMMMMM
7 7 A G > - 0 0 21 281 6 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN N NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
8 8 A P H > S+ 0 0 27 301 1 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
9 9 A I H >> S+ 0 0 33 301 11 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIVIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
10 10 A S H 3> S+ 0 0 33 302 23 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
11 11 A R H 3X S+ 0 0 100 302 25 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRCRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
12 12 A L H XX S+ 0 0 0 302 1 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
13 13 A A H 3X S+ 0 0 21 302 60 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
14 14 A Q H 3X S+ 0 0 108 302 12 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
15 15 A I H S+ 0 0 1 302 41 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
17 17 A Q H ><5S+ 0 0 121 302 14 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
18 18 A A H 3<5S+ 0 0 79 302 20 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
19 19 A R T 3<5S- 0 0 123 302 28 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
20 20 A K T < 5S+ 0 0 188 302 22 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
21 21 A E S S+ 0 0 95 302 37 PPQPPPPPPPPPPPPPPPPPPPPPPPPPPPQSPQQPPQPPPPPPPPPPQPPPPPPPPPPPPPPPQQPPPP
36 36 A R T 3 S+ 0 0 194 302 17 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
37 37 A R T 3 S- 0 0 186 302 36 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
38 38 A R < - 0 0 101 302 12 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
39 39 A E E -A 32 0A 106 302 14 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
40 40 A F E -AB 31 55A 42 302 3 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
41 41 A V E -AB 30 54A 46 302 26 VVVVVVVIVVIIIVVIVVIIVVIIIIVLLVVLVIVVVVVVVVVVVVVVIVVVVVVVVVVVVVVVIIVVVV
42 42 A M E -AB 28 53A 15 302 23 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMM
43 43 A Q E -AB 27 52A 49 302 36 QQSQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
44 44 A V E -AB 26 51A 0 302 20 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
45 45 A K E +AB 25 50A 110 302 61 KKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
46 46 A V E > - B 0 49A 5 302 39 VVVVIVVVIVVVVVVVVIVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
47 47 A G T 3 S- 0 0 64 302 36 GNGGGGGNGGNNNGGNGGGNNNNGNGNGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
48 48 A N T 3 S+ 0 0 150 302 60 SNNNNNNNNNNNNSSNNSVNNNNTNTNMMNETNEENNENNNNNNNNNNENNNNNNNNNNNNNNNEENNNN
49 49 A E E < -B 46 0A 79 302 73 EEEEEEEEEDEEEEEEDEEEEEEEEEEDDYEAHEEHHEHHHHHHHHHHEHHHHHHHHHHHHHHHEEHHHH
50 50 A V E +B 45 0A 61 301 76 VVVIIIIVITVVVVVVIIVVVVVVVVVMMITVTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTT
51 51 A A E -B 44 0A 7 302 38 ATATTTTATTAAAAAATTTAAAATATAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
52 52 A T E -B 43 0A 69 302 75 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTETTEETEEEEEEEEEETEEEEEEEEEEEEEEETTEEEE
53 53 A G E -B 42 0A 2 302 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
54 54 A T E +B 41 0A 63 302 62 TTTTTTTTTTTTTTTTTTSTAATTTTATTITITTTTTTTTTTTTTTTTTTTTTAAATAASAASATTSSAT
55 55 A G E -B 40 0A 11 302 1 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
56 56 A P S S+ 0 0 52 302 59 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPLTPPTTPTTTTTTTTTTPTTTTTTTTTTTTTTTPPTTTT
57 57 A N S > S- 0 0 62 302 36 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
58 58 A K H > S+ 0 0 84 302 1 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
59 59 A K H >> S+ 0 0 133 302 3 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
60 60 A I H 3> S+ 0 0 53 302 46 IVIIIIIVIIVVVVVVIIVVVVVVVVVVVITIVTTVVTVVVVVVVVVVIVVVVVVVVVVVVVVVTTVAVV
61 61 A A H 3X S+ 0 0 0 302 1 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
62 62 A K H S+ 0 0 7 302 15 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
71 71 A L H <5S+ 0 0 55 302 81 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLELLEELEEEEEEEEEELEEEEEEEEEEEEEEELLEEEE
72 72 A Q H <5S+ 0 0 91 302 81 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHIHQIIQIIIIIIIIIIQIIIIIIIIIIIIIIIQQIIII
73 73 A L H <5S- 0 0 42 302 7 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
74 74 A G T <5S+ 0 0 45 293 14 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
75 75 A Y S S+ 0 0 88 277 50 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
77 77 A A H > S+ 0 0 33 277 81 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATVAAVVAVVVVVVVVVVAVVVVVVVVVVVVVVVAAVVVV
78 78 A S H > S+ 0 0 92 274 49 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSSPPSPPPPPPPPPPSPPPPPPPPPPPPPPPSSPPPP
79 79 A T H > S+ 0 0 84 204 76 TTTTTTTTTTTTTTTTTTTSTTTTTTTTTSST SS S S SS Q
80 80 A S H X S+ 0 0 54 197 62 S SPPPPVPPVVVPPVPP IAAVPVPAPPPPP PP P P PP S
81 81 A L H X S+ 0 0 117 134 83 L LLLLLPLLQQQVVPLL SPPQLQLPLLLVV VV V V VV
82 82 A Q H < S+ 0 0 135 134 58 Q QQQQQQQQQQQQQQQQ QQQQQQQQQQQVQ LV V V VV
83 83 A D H < S+ 0 0 149 134 61 D DDDDDNDDNNNNNNDD NNNNNNNNSCEEE EE E E EE
84 84 A S H < S- 0 0 114 124 65 Q QQQQQPQQAAAQQPQQ PPPATATPPPQKQ KK K K KK
85 85 A G < - 0 0 24 118 88 L LTTTTTTTTTTPPATP STTTPTPTQQPTL AT T S SS
86 86 A P + 0 0 118 116 64 D DEEEEEEEEEEEEEEE EEEEEEEEEEEGE GG G G GG
87 87 A S - 0 0 112 109 18 K KKKKK KK KK KK E KKNKKKKKKK KK K K KK
88 88 A S 0 0 132 105 53 T TL LL LL SS LP S NMMMRLLSRT RR R R RR
89 89 A G 0 0 123 99 35 G GG GG GG SS GG DDDAGGGG GG G G GG
## ALIGNMENTS 141 - 210
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....5....:....6....:....7....:....8....:....9....:....0....:....1
1 1 A G 0 0 126 129 23 EEDE EEDE EEDEE E ED EEEEEEEEEEEEEEE E EEEEEEEEEEEEEEE
2 2 A S - 0 0 92 133 82 YYNH CCCH YYCHC Y YY YYYYYYYYYYYYYYY S YYYYYYYYYYYYYYY
3 3 A S - 0 0 95 270 23 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG GGGGGGGGGGGGGGGGGGGGS GGGGGGGGGGGGGGG
4 4 A G S S+ 0 0 65 273 48 QQPQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ QQQQQQQQQQQQQQQQQQQQD QQQQQQQQQQQQQQQ
5 5 A S S S- 0 0 121 276 45 GVGVGGGGGVGGGGVGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGE GGGGGGGGGGGGGGG
6 6 A S S S+ 0 0 124 278 57 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMIMMMMMMMMMMMMMMMMMM MMMMMMMMMMMMMMM
7 7 A G > - 0 0 21 281 6 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNN
8 8 A P H > S+ 0 0 27 301 1 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
9 9 A I H >> S+ 0 0 33 301 11 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIVIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
10 10 A S H 3> S+ 0 0 33 302 23 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
11 11 A R H 3X S+ 0 0 100 302 25 RRRRRRRRRKRRRRKRRRRRRRRRRRRRRRRRCRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
12 12 A L H XX S+ 0 0 0 302 1 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
13 13 A A H 3X S+ 0 0 21 302 60 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAIIAAAAAAAAAAAAAAA
14 14 A Q H 3X S+ 0 0 108 302 12 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
15 15 A I H S+ 0 0 1 302 41 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
17 17 A Q H ><5S+ 0 0 121 302 14 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
18 18 A A H 3<5S+ 0 0 79 302 20 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
19 19 A R T 3<5S- 0 0 123 302 28 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
20 20 A K T < 5S+ 0 0 188 302 22 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
21 21 A E S S+ 0 0 95 302 37 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPSPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
36 36 A R T 3 S+ 0 0 194 302 17 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
37 37 A R T 3 S- 0 0 186 302 36 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRLRRQRRRRRRRRRRRRRRR
38 38 A R < - 0 0 101 302 12 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
39 39 A E E -A 32 0A 106 302 14 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
40 40 A F E -AB 31 55A 42 302 3 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
41 41 A V E -AB 30 54A 46 302 26 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVLVVVIVVVVVVVVVVVVVVVVIVVVVVVVVVVVVVVVV
42 42 A M E -AB 28 53A 15 302 23 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMLMMMMMMMMMMMMMMM
43 43 A Q E -AB 27 52A 49 302 36 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQEQQQQQQQQQQQQQQQQ
44 44 A V E -AB 26 51A 0 302 20 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVCVVVVVVVVVVVVVVV
45 45 A K E +AB 25 50A 110 302 61 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKTTVKKSSTTSSTTTTTTT
46 46 A V E > - B 0 49A 5 302 39 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVLVVVVVVVVVVVVVVV
47 47 A G T 3 S- 0 0 64 302 36 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGACGGGGAACCCCNNNNNNC
48 48 A N T 3 S+ 0 0 150 302 60 NNNNHHNNNNNTTNNNHHHHHHHHHHHHHHHNSNHNNGGGVVMVMMVVMVMNGKANNGGGGGGGGGGGGG
49 49 A E E < -B 46 0A 79 302 73 HHHHHHHHHHHQQHHHHHHHHHHHHHHHHHHHAHHHEHHHHHHHHHHHHHHQHHLQQQQQQQQQQQQQQQ
50 50 A V E +B 45 0A 61 301 76 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTVTTTVTTTTTTTTTTTTTTVCSTCCNNTTTTSSSSSSS
51 51 A A E -B 44 0A 7 302 38 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAASAFTSSAAAAAAAAAAAAA
52 52 A T E -B 43 0A 69 302 75 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEETEEETEEEEEEEEEEEEEEEEIQEEEEEEEEEEEEEEE
53 53 A G E -B 42 0A 2 302 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
54 54 A T E +B 41 0A 63 302 62 TTTTVVSSATAMMATSVVVVVVVVAVVAAVVSIAVTTMMMMMMMMMMMMMMMMSAMMMMMMMMMMMMMMM
55 55 A G E -B 40 0A 11 302 1 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
56 56 A P S S+ 0 0 52 302 59 TTTTTTTTTTTPPTTTTTTTTTTTTTTTTTTTLTTTPTTTTTTTTTTTTTTPPPPPPPPPPPPPPPPPPP
57 57 A N S > S- 0 0 62 302 36 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNNNNNNNNNNNNNNNNNNSNNSSSSSSSSSSSSSSS
58 58 A K H > S+ 0 0 84 302 1 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
59 59 A K H >> S+ 0 0 133 302 3 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
60 60 A I H 3> S+ 0 0 53 302 46 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVAIVVVVVVVVVVVVVVVVVVVVVTVVVVVVVVVVVVVVV
61 61 A A H 3X S+ 0 0 0 302 1 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
62 62 A K H S+ 0 0 7 302 15 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLTLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
71 71 A L H <5S+ 0 0 55 302 81 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEELEEEQEEEEEEEEEEEEEEEEQQEEEEEEEEEEEEEEE
72 72 A Q H <5S+ 0 0 91 302 81 IIIIIIIIIIILLIIIIIIIIIIIIIIIIIIIHIIIMIIIIILILLIILILLLQKLLLLLLLLLLLLLLL
73 73 A L H <5S- 0 0 42 302 7 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLTLLLLLLLLLLLLLLLLLLMMLLLLLLLLLLLLL
74 74 A G T <5S+ 0 0 45 293 14 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
75 75 A Y S S+ 0 0 88 277 50 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKQKKKKKKKKKKKKKKKKSSKKKKKKKKKKKKKKK
77 77 A A H > S+ 0 0 33 277 81 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVTVVVEVVVIIVIVVIIVVVVVSRVVVVVVVVVVVVVVV
78 78 A S H > S+ 0 0 92 274 49 PAPPPPPPPPP PPPPPPPPPPPPPPPPPPPSPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
79 79 A T H > S+ 0 0 84 204 76 Q T QT QQQQQQQQQQQQPTPQQQQQQQQQQQQQQQ
80 80 A S H X S+ 0 0 54 197 62 S P HS PPPPPPPPPPPPP PPPPPPPPPPPPPPP
81 81 A L H X S+ 0 0 117 134 83 I SL
82 82 A Q H < S+ 0 0 135 134 58 Q HL
83 83 A D H < S+ 0 0 149 134 61 E QP
84 84 A S H < S- 0 0 114 124 65 Q AP
85 85 A G < - 0 0 24 118 88 L L
86 86 A P + 0 0 118 116 64 E
87 87 A S - 0 0 112 109 18 K
88 88 A S 0 0 132 105 53 T
89 89 A G 0 0 123 99 35
## ALIGNMENTS 211 - 280
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....2....:....3....:....4....:....5....:....6....:....7....:....8
1 1 A G 0 0 126 129 23 EEEEEED EEEN EEEEEEEEEEED EENEEEDNEDDEE Q ED SDE DEEEE EDDQDDEDD E
2 2 A S - 0 0 92 133 82 YYYYYYS SYYY YYTYYYYYTTYY AAYAAVAYVTTAF N YV SYY IYLYL Y LMQLMMLMM Y
3 3 A S - 0 0 95 270 23 GGGSGGS VGGG GGTGGGGGTTGG AAGAAVAGTAAATGSDGA GGG DGDGD G DDDDDDDDD G
4 4 A G S S+ 0 0 65 273 48 QQQQQQE EQQV QQEQQQQQEEQV EEVEEDEVEEEEEVQDQENGHH PHDHD H DDDDDDDDD HE
5 5 A S S S- 0 0 121 276 45 GGGGGGE DGGG GGEGGGGGEEGG EEGEEEEGEEEEETGNGKGSQQGTQAQA QGAAAAAAAAA QD
6 6 A S S S+ 0 0 124 278 57 MMMMIMV MMMI MMIMMMMMIIMI LVVIVVIVIIVVVIIVMMEMDIILLIEIELILEDEEDDEDD IT
7 7 A G > - 0 0 21 281 6 NNNNNNN NNNNDNNNNNNNNNNNNNHNNNNNNNNNNNNNNNNNNMNNNHNNNNNDNHNNNNNNNNNNND
8 8 A P H > S+ 0 0 27 301 1 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPSPPPPPPPPPPPPPPPPPSPPPPPPPPPPPPPPPPPPP
9 9 A I H >> S+ 0 0 33 301 11 IIIIIIIIIIIIIIIIIIIIIIIIIIVVVIVVIVIIVVVIIIIIILIVVVIVIVITVVIIIIIIIIIIVV
10 10 A S H 3> S+ 0 0 33 302 23 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSSSTSTTSSTTTTTTTTTSSA
11 11 A R H 3X S+ 0 0 100 302 25 RRRRRRRRRRRRQRRRRRRRRRRRRRRRRRRRRRRRRRRRRRKRRGRRRRIRKRKRRRKKKKKKKKKRRK
12 12 A L H XX S+ 0 0 0 302 1 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLYLLLLLLLLLLLLLLLLLLLLLLLL
13 13 A A H 3X S+ 0 0 21 302 60 AAAAAAVIIAAIVAAIAAAAAIIAIIAVVIVVIDIIDDVIIIIAMRAMMVGMIMIQIVIIIIIIIIIMMY
14 14 A Q H 3X S+ 0 0 108 302 12 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQKQQHVQQQQQQQQEQQQQQQQQQQQQQK
15 15 A I H S+ 0 0 1 302 41 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQMQQQQMQQQQQTQQQQVRTMLLMQMQVLLQQQQQQQQQQMQ
17 17 A Q H ><5S+ 0 0 121 302 14 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSNQQQQQQQQQQQQQQQQQQQQQQA
18 18 A A H 3<5S+ 0 0 79 302 20 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAVAAAAAAARATATSAATTTNTTTTTAAT
19 19 A R T 3<5S- 0 0 123 302 28 KKKKKKKKKKKQRKKNKKKKKNNKKRAKKQKKKKQNKKKNEKKKRSARRKRRRRRRRKRRRRRRRRRRRK
20 20 A K T < 5S+ 0 0 188 302 22 KKKKKKRKKKKQKKKKKKKKKKKKKRKRRKRRKRKKRRRKKKKKKTRNKNHKKKKHCNKKKKKKKKKKKK
21 21 A E S S+ 0 0 95 302 37 PPPAPPPPPPPPPPPPPPPPPPPPPAQPPPPPPPPPPPPPYPSPGLASSIMSSSSDSISACSAASAAGST
36 36 A R T 3 S+ 0 0 194 302 17 RRRLRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRHRKRRRRKRRMRRRRHRRRRRRRRRRRRRN
37 37 A R T 3 S- 0 0 186 302 36 RRRrRRRQRRRRqRRRRRRRRRRRRRKRRRRRKRRRRRRRRQKRRrRYYRKYRYRQYRRRRRRRRRRRYr
38 38 A R < - 0 0 101 302 12 RRRrRRRRRRRRpRRRRRRRRRRRRRKRRRRRKKRRKKRRRRKRReRKKRKKRKRRKRRRRRRRRRRKKk
39 39 A E E -A 32 0A 106 302 14 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEQDEEEEEEEEEEEEEEEEEEEEEQEE
40 40 A F E -AB 31 55A 42 302 3 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFVFFFFFFFFFYFFFFFFFFFFFFFF
41 41 A V E -AB 30 54A 46 302 26 VVVIVVVVIVVVVVVVVVVVVVVVVIIVVIVVVVIVVVVVIVLVTLLIVTTVVVVVTTVVVVVVVVVTVI
42 42 A M E -AB 28 53A 15 302 23 MMMMMMMLMMMIVMMIMMMMMIIMIIMMMVMMIMVIMMMIMLMMIKVIMMLMMVMMVMMMMMMMMMMIMF
43 43 A Q E -AB 27 52A 49 302 36 QQQQQQEQEQQQEQQEQQQQQEEQQEQEEQEEEEQEEEEEQQEQEAQREQREEEEAQQEEEEEEEEEEEE
44 44 A V E -AB 26 51A 0 302 20 VVVVVVVCVVVVVVVAVVVVVAAVVVCVVVVVVVVAVVVAVCVDVVCVVVVVVVVVVVVVVVVVVVVVVV
45 45 A K E +AB 25 50A 110 302 61 TTSKSKSKKMGQAKKSKKKKKSSTASITTETTSTESTTTSQVSGSKDQISKISTSTSSSSSSSSSSSTVS
46 46 A V E > - B 0 49A 5 302 39 VVVVVIVLMVEVVVVVVVVVVVVVVVVMMVMMVMVVMMMVVLIVAVACCAVCACAVCAAAAAAAAAAACV
47 47 A G T 3 S- 0 0 64 302 36 CNAGAGGGGCSDGGGNGGGGGNNCGANGGEGGGGENGGGNDGSDGGPGDAGDSASEGASSSNSSSSSADG
48 48 A N T 3 S+ 0 0 150 302 60 GGGDGVQNEGGDSNNGNNNNNGGGEGDQQDQQEQDGQQQGEANIGSPKDSSDGDGGSSGGGGGGGGGGDQ
49 49 A E E < -B 46 0A 79 302 73 QQQDQHHLHQvQVHHHHHHHHHHHQKKHHKHHYHKHHHHHELLWREHEgKHgSgSHRKTSRSSSTSSKgN
50 50 A V E +B 45 0A 61 301 76 TSNCTTSTSCtTTSSSSSAAASSCSTVSSTSSSSTSSSSSKTK.QISVrTErIrIEITTTTTTTTTTRrS
51 51 A A E -B 44 0A 7 302 38 AAAAATAAFAACAAACAAAAACCACASAACAAFACCAAACCTAAAAAQCAACACAYCAAAAAAAAAAACA
52 52 A T E -B 43 0A 69 302 75 EEETEEQQIEETTEETEEEEETTETCQQQPQQNQPTQQQTTQTKTTTEETLERERTSSRRRRRRRRRVEL
53 53 A G E -B 42 0A 2 302 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
54 54 A T E +B 41 0A 63 302 62 LMMTMATVSLMVVMMVMMSSSVVMVTIIISIITISVIIIVVATKVTLKIKVITTTTSKTTTTTTTTTVIK
55 55 A G E -B 40 0A 11 302 1 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGLGGGGGGGGGGGGGGGGGGGGGGGGGG
56 56 A P S S+ 0 0 52 302 59 PPPPPTPPPPTPTTTPTTTTTPPPPPPPPPPPPPPPPPPPHPPGMPPPPKPPNPNPPKNNNNNNNNNMPP
57 57 A N S > S- 0 0 62 302 36 SSSSSNNNNSNNKNNNNNNNNNNSNNNNNNNNNNNNNNNNNNSETNNNNTNNSNSSNTSSSSSSSSSTNN
58 58 A K H > S+ 0 0 84 302 1 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKQKKKKKKKKKKKKKKKKKKKKKKKKKK
59 59 A K H >> S+ 0 0 133 302 3 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKKKKKKKKRKKKKKKKKKKKKK
60 60 A I H 3> S+ 0 0 53 302 46 VVVIVVLTLVVLDVVVVVVVVVVVLDTLLLLLLLLVLLLILTLIAVTLLDTLLLLALDLLQLLLLLLALD
61 61 A A H 3X S+ 0 0 0 302 1 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAKASAAAAAAAAAAAAAAAAAAAAAAAA
62 62 A K H S+ 0 0 7 302 15 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLPLLLLLLLLLLLLLLLFLLFFLFFLLL
71 71 A L H <5S+ 0 0 55 302 81 EEELEEAQQEETDEESEEEEESSEQNVAAQAAQAQAAAANHQSSILLQAKQAEAEAAKEEEEEEEEEIAV
72 72 A Q H <5S+ 0 0 91 302 81 LLLQLLTRQLILALLDLLIIIDDLLEIQQLQQEQLEQQQQHKLREQATRLLRLRLDELLLLLLLLLLERE
73 73 A L H <5S- 0 0 42 302 7 LLLLLLLLLLLLLLLLLLLLLLLLLLMLLLLLMLLLLLLLLLLLLLMIILMILILIILLLLLLLLLLLIM
74 74 A G T <5S+ 0 0 45 293 14 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGEGGGGGEGEDGGEEEEEEEEEGGG
75 75 A Y S S+ 0 0 88 277 50 KKKKKKSSSKKN KKTKKKKKTTKSTESSTSSSSTNSSSGNSGQTKS ARV V VA AVE
77 77 A A H > S+ 0 0 33 277 81 VVVPVVKRSVVK VVSVVVVVSSVRIPKKKKKTKKNKKKNQRKLPAA PLK K KP PKS
78 78 A S H > S+ 0 0 92 274 49 PPPSPPPPPPPP PPSPPPPPSSPPTSPPPPPPPPNPPPPSPPGSSS TTP P PT SP
79 79 A T H > S+ 0 0 84 204 76 QQQLQQQPTQQS PP PPPPP PST SSSSSTQSTQQSP PSGETG PEM M LP RM
80 80 A S H X S+ 0 0 54 197 62 PPPPPPPADPPP PP PPPPP PPP PPPPPTPPIPPPS QDNAPD GP P P AP
81 81 A L H X S+ 0 0 117 134 83 A G H PP PPPPP QQI T N VNI A T
82 82 A Q H < S+ 0 0 135 134 58 A N K PP PPPPP PPQ N P PHQ Q G
83 83 A D H < S+ 0 0 149 134 61 S Q P KK KKKKK HQS N K SHV S G
84 84 A S H < S- 0 0 114 124 65 P A A PP PPPPP KKE P P RHH Q P
85 85 A G < - 0 0 24 118 88 D A L AA AAAAA D V K R P V
86 86 A P + 0 0 118 116 64 D G LL LLLLL N L T P E N
87 87 A S - 0 0 112 109 18 K G KK KKKKK T K R R K K
88 88 A S 0 0 132 105 53 T TT TTTTT T T T T
89 89 A G 0 0 123 99 35 G EE EEEEE N E G
## ALIGNMENTS 281 - 301
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....9....:....0....:....1....:....2....:....3....:....4....:....5
1 1 A G 0 0 126 129 23 EHEDD DDDDDDDDED
2 2 A S - 0 0 92 133 82 LYLLLYYY DDDDDDDDYD
3 3 A S - 0 0 95 270 23 DGDDDGGG GGGGGGGGGG
4 4 A G S S+ 0 0 65 273 48 EHDDDHHHD IIIIIIIIHI
5 5 A S S S- 0 0 121 276 45 DQAAAQQQA PPPPPPPPQP
6 6 A S S S+ 0 0 124 278 57 EIEDDIIIS GGGGGGGGIG
7 7 A G > - 0 0 21 281 6 NNNNNNNNN NNNNNNNNNN
8 8 A P H > S+ 0 0 27 301 1 PPPPPPPPP PPPPPPPPPPP
9 9 A I H >> S+ 0 0 33 301 11 IVIIIVVVI VVVVVVVVVVK
10 10 A S H 3> S+ 0 0 33 302 23 TSTTTSSSTSGGGGGGGGSGT
11 11 A R H 3X S+ 0 0 100 302 25 KRKKKRRRKQSSSSSSSSRSR
12 12 A L H XX S+ 0 0 0 302 1 LLVLLLLLLLLLLLLLLLLLL
13 13 A A H 3X S+ 0 0 21 302 60 IIIIIIIIVQQQQQQQQQMQQ
14 14 A Q H 3X S+ 0 0 108 302 12 QQQQQQQQEEEEEEEEEEQEE
15 15 A I H S+ 0 0 1 302 41 QTQQQTITCICCCCCCCCMCL
17 17 A Q H ><5S+ 0 0 121 302 14 QQQQQQQQQQMMMMMMMMQMQ
18 18 A A H 3<5S+ 0 0 79 302 20 TAMTTASAHRAAAAAAAAAAG
19 19 A R T 3<5S- 0 0 123 302 28 RKRRRKKKNDRRRRRRRRRRR
20 20 A K T < 5S+ 0 0 188 302 22 KSKKKSNSKNRRRRRRRRKRG
21 21 A E S S+ 0 0 95 302 37 SSSAASSSAAPPPPPPPPEPD
36 36 A R T 3 S+ 0 0 194 302 17 RKRRRKKKRHHHHHHHHHGHH
37 37 A R T 3 S- 0 0 186 302 36 RYRRRYYYQNEEEEEEEEIEA
38 38 A R < - 0 0 101 302 12 RKRRRKKKRRRRRRRRRRVRK
39 39 A E E -A 32 0A 106 302 14 EEEEEEEEQETTTTTTTTSTI
40 40 A F E -AB 31 55A 42 302 3 FFFFFFFFFFFFFFFFFFDFF
41 41 A V E -AB 30 54A 46 302 26 VVVVVIVVVVSSSSSSSSDST
42 42 A M E -AB 28 53A 15 302 23 IIMMMIIIVSIIIIIIIIFIV
43 43 A Q E -AB 27 52A 49 302 36 EQEEEQRREEAAAAAAAAKAA
44 44 A V E -AB 26 51A 0 302 20 VAVVVVVVVVCCCCCCCCVCC
45 45 A K E +AB 25 50A 110 302 61 CKTSSKKQCQTTTTTTTTTTE
46 46 A V E > - B 0 49A 5 302 39 AYAAAYCYTLIIIIIIIICIL
47 47 A G T 3 S- 0 0 64 302 36 SGSSSGGGKNGGGGGGGGAGS
48 48 A N T 3 S+ 0 0 150 302 60 GEGGGDDDDTNNNNNNNNDND
49 49 A E E < -B 46 0A 79 302 73 NISSSDEELqTTTTTTTTgTg
50 50 A V E +B 45 0A 61 301 76 IVTTTVMTTlRRRRRRRRrRv
51 51 A A E -B 44 0A 7 302 38 ACAAAQRRVGEEEEEEEECEA
52 52 A T E -B 43 0A 69 302 75 RERRREEERVIIIIIIIIEIQ
53 53 A G E -B 42 0A 2 302 0 GGGGGGGGGGGGGGGGGGGGG
54 54 A T E +B 41 0A 63 302 62 TKTTTKRKVTTTTTTTTTTTV
55 55 A G E -B 40 0A 11 302 1 GGGGGGGGGGGGGGGGGGGGG
56 56 A P S S+ 0 0 52 302 59 NPNNNPPPNRKKKKKKKKPKE
57 57 A N S > S- 0 0 62 302 36 SNSSSNNNSSSSSSSSSSNSS
58 58 A K H > S+ 0 0 84 302 1 KKKKKKKKKKKKKKKKKKKKR
59 59 A K H >> S+ 0 0 133 302 3 KRKKKRRRKKKKKKKKKKKKR
60 60 A I H 3> S+ 0 0 53 302 46 LLLLLLLLSELLLLLLLLLLA
61 61 A A H 3X S+ 0 0 0 302 1 AAAAAAAAAAAAAAAAAAAAA
62 62 A K H S+ 0 0 7 302 15 LLLFFLLLLLTTTTTTTTLTL
71 71 A L H <5S+ 0 0 55 302 81 EDEEEEEELMQQQQQQQQAQA
72 72 A Q H <5S+ 0 0 91 302 81 LLLLLSTTAKLLLLLLLLRLQ
73 73 A L H <5S- 0 0 42 302 7 LILLLIIILLLLLLLLLLILL
74 74 A G T <5S+ 0 0 45 293 14 EGEEEGGGGS G G
75 75 A Y S S+ 0 0 88 277 50 SVAVVVVVDK V
77 77 A A H > S+ 0 0 33 277 81 DKDQQKKKTS K
78 78 A S H > S+ 0 0 92 274 49 PPHTTPPPTS P
79 79 A T H > S+ 0 0 84 204 76 KLTTTLLLTT M
80 80 A S H X S+ 0 0 54 197 62 SPPPPPPPS P
81 81 A L H X S+ 0 0 117 134 83 STT A
82 82 A Q H < S+ 0 0 135 134 58 NNN P
83 83 A D H < S+ 0 0 149 134 61 EEE G
84 84 A S H < S- 0 0 114 124 65 K
85 85 A G < - 0 0 24 118 88
86 86 A P + 0 0 118 116 64
87 87 A S - 0 0 112 109 18
88 88 A S 0 0 132 105 53
89 89 A G 0 0 123 99 35
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 2 68 2 26 129 0 0 0.875 29 0.76
2 2 A 2 7 1 4 1 0 56 0 5 0 5 4 5 2 0 0 1 0 2 7 133 0 0 1.739 58 0.17
3 3 A 1 0 0 0 0 0 0 85 3 0 3 2 0 0 0 0 0 0 0 6 270 0 0 0.629 20 0.76
4 4 A 2 0 3 0 0 0 0 1 0 1 0 0 0 4 0 0 75 7 0 7 273 0 0 1.007 33 0.52
5 5 A 1 0 0 0 0 0 0 76 6 3 1 1 0 0 0 0 4 6 0 1 276 0 0 0.998 33 0.55
6 6 A 4 2 15 69 0 0 0 3 0 0 1 0 0 0 0 0 0 3 0 3 278 0 0 1.118 37 0.42
7 7 A 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 97 1 281 0 0 0.165 5 0.94
8 8 A 0 0 0 0 0 0 0 0 0 99 1 0 0 0 0 0 0 0 0 0 301 0 0 0.040 1 0.98
9 9 A 11 0 88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 301 0 0 0.418 13 0.88
10 10 A 0 0 0 0 0 0 0 3 0 0 90 6 0 0 0 0 0 0 0 0 302 0 0 0.391 13 0.77
11 11 A 0 0 0 0 0 0 0 0 0 0 3 0 1 0 88 7 1 0 0 0 302 0 0 0.498 16 0.75
12 12 A 0 99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 302 0 0 0.044 1 0.99
13 13 A 3 0 13 3 0 0 0 0 75 0 0 0 0 0 0 0 4 0 0 1 302 0 0 0.913 30 0.39
14 14 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 94 4 0 0 302 0 0 0.261 8 0.88
15 15 A 3 9 87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 302 0 0 0.501 16 0.81
16 16 A 1 2 1 2 0 0 0 0 0 0 0 2 3 0 0 0 89 0 0 0 302 0 0 0.534 17 0.59
17 17 A 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 96 0 0 0 302 0 0 0.200 6 0.86
18 18 A 0 0 0 0 0 0 0 0 92 0 1 5 0 0 1 0 0 0 0 0 302 0 0 0.377 12 0.80
19 19 A 0 0 0 0 0 0 0 0 1 0 0 0 0 0 16 80 1 0 2 0 302 0 0 0.683 22 0.71
20 20 A 0 0 0 0 0 0 0 0 0 0 1 0 0 1 7 88 0 0 2 0 302 0 0 0.517 17 0.77
21 21 A 0 0 0 0 0 3 0 1 0 0 0 0 0 0 1 2 1 87 0 4 302 0 0 0.618 20 0.65
22 22 A 0 0 0 0 0 0 0 0 0 4 0 0 0 0 7 84 1 1 2 0 302 0 0 0.692 23 0.67
23 23 A 0 1 0 0 0 0 0 0 0 3 0 0 0 2 0 0 1 93 0 0 302 0 0 0.357 11 0.79
24 24 A 0 0 0 0 0 0 0 0 0 99 0 0 0 0 0 0 0 0 0 0 302 0 0 0.044 1 0.97
25 25 A 9 1 6 0 0 0 0 0 0 0 1 5 0 0 0 2 1 49 0 26 302 0 0 1.437 47 0.30
26 26 A 0 0 0 0 10 0 89 0 0 0 0 0 0 0 0 0 0 0 0 0 302 0 0 0.353 11 0.97
27 27 A 32 6 4 20 0 0 0 0 2 0 7 12 0 0 0 1 3 10 3 0 302 0 0 2.013 67 0.15
28 28 A 4 91 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 302 0 0 0.397 13 0.93
29 29 A 14 63 16 1 0 0 0 0 0 0 0 4 0 0 1 1 0 0 0 0 302 0 0 1.156 38 0.56
30 30 A 0 0 0 0 0 0 0 0 10 0 43 36 0 0 0 0 0 7 0 2 302 0 0 1.308 43 0.35
31 31 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 92 0 1 302 0 0 0.355 11 0.83
32 32 A 0 0 0 0 0 0 0 0 1 0 0 0 0 2 83 4 0 3 5 1 302 0 21 0.742 24 0.58
33 33 A 0 0 0 0 0 0 0 92 0 0 1 0 0 1 0 0 0 5 0 0 302 0 0 0.386 12 0.82
34 34 A 3 40 5 32 3 0 0 0 6 1 1 4 0 1 0 1 2 0 0 1 302 0 0 1.701 56 0.37
35 35 A 0 0 1 0 0 0 0 1 4 82 7 0 0 0 0 0 3 0 0 1 302 0 0 0.785 26 0.62
36 36 A 0 0 0 0 0 0 0 0 0 0 0 0 0 4 92 2 0 0 0 0 302 0 0 0.362 12 0.82
37 37 A 0 0 0 0 0 0 3 0 0 0 0 0 0 0 89 1 2 3 0 0 302 0 4 0.531 17 0.64
38 38 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 92 7 0 0 0 0 302 0 0 0.310 10 0.87
39 39 A 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 1 95 0 0 302 0 0 0.256 8 0.85
40 40 A 0 0 0 0 99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 302 0 0 0.067 2 0.97
41 41 A 83 2 9 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 302 0 0 0.689 23 0.73
42 42 A 3 1 9 86 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 302 0 0 0.565 18 0.76
43 43 A 0 0 0 0 0 0 0 0 4 0 0 0 0 0 2 0 79 15 0 0 302 0 0 0.700 23 0.64
44 44 A 93 0 0 0 0 0 0 0 2 0 0 0 5 0 0 0 0 0 0 0 302 0 0 0.316 10 0.80
45 45 A 1 0 1 0 0 0 0 1 1 0 11 12 1 0 0 69 2 1 0 0 302 0 0 1.123 37 0.39
46 46 A 79 2 5 3 0 0 1 0 7 0 0 0 3 0 0 0 0 0 0 0 302 0 0 0.864 28 0.61
47 47 A 0 0 0 0 0 0 0 75 4 0 6 0 3 0 0 0 0 1 9 2 302 0 0 0.986 32 0.63
48 48 A 3 0 0 2 0 0 0 16 1 0 4 2 0 6 0 1 3 4 53 5 302 0 0 1.672 55 0.40
49 49 A 1 2 0 0 0 0 1 2 1 0 4 4 0 36 1 2 9 36 1 2 302 1 8 1.715 57 0.27
50 50 A 33 0 4 1 0 0 0 0 2 0 11 40 2 0 5 1 0 1 1 0 301 0 0 1.599 53 0.23
51 51 A 0 0 0 0 1 0 0 0 81 0 1 5 6 0 1 0 1 3 0 0 302 0 0 0.816 27 0.61
52 52 A 1 1 4 0 0 0 0 0 0 1 1 42 0 0 5 0 5 41 0 0 302 0 0 1.338 44 0.25
53 53 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 302 0 0 0.000 0 1.00
54 54 A 10 1 5 14 0 0 0 0 7 0 6 54 0 0 0 3 0 0 0 0 302 0 0 1.498 50 0.37
55 55 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 302 0 0 0.022 0 0.99
56 56 A 0 1 0 1 0 0 0 0 0 59 0 29 0 0 0 4 0 0 5 0 302 0 0 1.090 36 0.40
57 57 A 0 0 0 0 0 0 0 0 0 0 18 1 0 0 0 0 0 0 80 0 302 0 0 0.580 19 0.63
58 58 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 99 0 0 0 0 302 0 0 0.044 1 0.99
59 59 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 98 0 0 0 0 302 0 0 0.110 3 0.96
60 60 A 45 17 29 0 0 0 0 0 2 0 0 4 0 0 0 0 0 0 0 2 302 0 0 1.349 45 0.53
61 61 A 0 0 0 0 0 0 0 0 99 0 0 0 0 0 0 0 0 0 0 0 302 0 0 0.044 1 0.98
62 62 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 99 0 1 0 0 302 0 0 0.084 2 0.96
63 63 A 0 0 0 0 0 1 0 0 0 0 0 0 0 0 72 27 1 0 0 0 302 0 0 0.678 22 0.78
64 64 A 0 1 1 0 0 0 0 0 9 0 1 1 0 1 0 0 4 0 83 0 302 0 0 0.707 23 0.59
65 65 A 0 0 0 0 0 0 0 0 99 0 0 0 0 0 0 0 0 0 0 0 302 0 0 0.044 1 0.98
66 66 A 0 0 0 0 0 0 0 0 99 0 0 0 0 0 0 0 0 0 0 0 302 0 0 0.044 1 0.98
67 67 A 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 6 88 0 1 302 0 0 0.544 18 0.69
68 68 A 0 0 0 0 0 0 0 1 53 0 0 0 0 0 0 12 1 0 31 0 302 0 0 1.126 37 0.40
69 69 A 1 13 1 84 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 302 0 0 0.562 18 0.88
70 70 A 0 94 0 0 2 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 302 0 0 0.277 9 0.84
71 71 A 1 38 1 0 0 0 0 0 6 0 2 0 0 0 0 1 7 43 1 1 302 0 0 1.374 45 0.19
72 72 A 0 23 26 0 0 0 0 0 1 0 0 1 0 1 2 1 40 2 0 1 302 0 0 1.529 51 0.18
73 73 A 0 93 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 302 0 0 0.298 9 0.92
74 74 A 0 0 0 0 0 0 0 94 0 0 0 0 0 0 0 0 0 5 0 0 293 0 0 0.280 9 0.85
75 75 A 0 1 0 0 38 0 58 0 1 0 0 0 0 0 0 0 0 0 0 0 279 0 0 0.860 28 0.82
76 76 A 4 0 0 0 0 0 0 1 1 0 6 3 0 0 0 82 1 1 1 0 277 0 0 0.822 27 0.49
77 77 A 39 1 2 0 0 0 0 0 40 2 3 1 0 0 1 8 1 0 1 1 277 0 0 1.493 49 0.18
78 78 A 0 0 0 0 0 0 0 0 0 52 44 3 0 0 0 0 0 0 0 0 274 0 0 0.877 29 0.50
79 79 A 0 3 0 2 0 0 0 1 0 7 10 55 0 0 0 0 20 1 0 0 204 0 0 1.395 46 0.24
80 80 A 4 0 1 0 0 0 0 1 3 48 19 1 0 1 0 0 1 0 22 2 197 0 0 1.441 48 0.38
81 81 A 8 65 2 0 0 0 0 1 2 9 2 3 0 1 0 0 5 0 1 0 134 0 0 1.352 45 0.16
82 82 A 4 1 0 0 0 0 0 1 1 9 0 0 0 1 0 1 78 0 4 0 134 0 0 0.910 30 0.42
83 83 A 1 0 0 0 0 0 0 1 0 1 4 0 1 1 0 6 2 10 12 60 134 0 0 1.422 47 0.39
84 84 A 0 0 0 0 0 0 0 0 6 19 1 2 0 2 1 8 60 1 0 0 124 0 0 1.252 41 0.35
85 85 A 2 58 0 0 0 0 0 1 8 6 3 16 0 0 1 1 2 0 0 2 118 0 0 1.428 47 0.11
86 86 A 0 7 0 0 0 0 0 7 0 2 0 1 0 0 0 0 0 50 2 32 116 0 0 1.261 42 0.36
87 87 A 0 0 0 0 0 0 0 1 0 0 1 1 0 0 2 94 0 1 1 0 109 0 0 0.351 11 0.82
88 88 A 0 8 0 3 0 0 0 1 0 1 5 73 0 0 8 1 0 0 1 0 105 0 0 1.044 34 0.47
89 89 A 0 0 0 0 0 0 0 85 1 0 2 0 0 0 0 0 0 8 1 3 99 0 0 0.620 20 0.65
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
214 38 346 1 rRr
221 50 425 1 vHt
223 32 488 1 qSp
255 33 904 2 dRPa
256 35 411 1 rKe
259 50 309 1 gLr
260 29 592 8 rPLMERAGAh
262 50 488 1 gLr
263 33 810 2 nGNe
264 50 516 1 gLr
265 33 767 2 nGNe
268 29 439 8 rPLMERAGAh
269 33 374 2 nGNe
270 33 739 2 nGNe
271 33 787 2 nGNe
272 33 809 2 nGNd
273 33 739 2 nGNe
274 33 737 2 nGNe
275 33 744 2 nGNe
276 33 737 2 nGNe
277 33 737 2 nGNe
278 27 671 2 dRPt
279 50 548 1 gLr
280 35 355 1 rKk
281 33 765 2 nGNe
283 33 752 2 nGNe
284 33 738 2 nGNe
285 33 741 2 nGNe
289 30 750 3 aGGKe
290 41 233 1 qAl
299 33 521 8 hGQSRYKEFv
299 50 546 1 gLr
301 43 196 2 gDEv
//