Complet list of 1uhs hssp file
Complete list of 1uhs.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1UHS
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-10
HEADER TRANSCRIPTION 10-JUL-03 1UHS
COMPND MOL_ID: 1; MOLECULE: HOMEODOMAIN ONLY PROTEIN; CHAIN: A; SYNONYM: HOP;
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: MUS MUSCULUS; ORGANISM_COMMON: HOUSE M
AUTHOR K.SAITO,S.KOSHIBA,M.INOUE,M.SHIROUZU,T.TERADA,T.YABUKI, M.AOKI,T.MATSU
DBREF 1UHS A 9 72 UNP Q8R1H0 HOP_MOUSE 10 73
SEQLENGTH 72
NCHAIN 1 chain(s) in 1UHS data set
NALIGN 58
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : HOP_MOUSE 1UHS 0.90 0.96 1 72 2 73 72 0 0 73 Q8R1H0 Homeodomain-only protein OS=Mus musculus GN=Hopx PE=1 SV=1
2 : HOP_RAT 0.90 0.96 1 72 2 73 72 0 0 73 Q78ZR5 Homeodomain-only protein OS=Rattus norvegicus GN=Hopx PE=3 SV=1
3 : G1SN79_RABIT 0.88 0.96 1 72 2 73 72 0 0 73 G1SN79 Uncharacterized protein OS=Oryctolagus cuniculus GN=HOP PE=3 SV=1
4 : HOP_BOVIN 0.88 0.96 1 72 2 73 72 0 0 73 Q8MJD5 Homeodomain-only protein OS=Bos taurus GN=HOP PE=3 SV=1
5 : L8IER9_9CETA 0.88 0.96 1 72 2 73 72 0 0 73 L8IER9 Homeodomain-only protein OS=Bos mutus GN=M91_21396 PE=3 SV=1
6 : G1LPJ4_AILME 0.86 0.96 1 72 2 73 72 0 0 73 G1LPJ4 Uncharacterized protein OS=Ailuropoda melanoleuca GN=HOPX PE=3 SV=1
7 : HOP_PIG 0.86 0.94 1 72 2 73 72 0 0 73 Q8MJD6 Homeodomain-only protein OS=Sus scrofa GN=HOPX PE=3 SV=1
8 : I3M9J4_SPETR 0.86 0.96 1 72 2 73 72 0 0 73 I3M9J4 Uncharacterized protein OS=Spermophilus tridecemlineatus GN=HOPX PE=3 SV=1
9 : K9IQ67_DESRO 0.86 0.96 1 72 29 100 72 0 0 100 K9IQ67 Putative homeodomain-only protein (Fragment) OS=Desmodus rotundus PE=2 SV=1
10 : F7EU22_MACMU 0.85 0.94 1 72 2 73 72 0 0 73 F7EU22 Uncharacterized protein OS=Macaca mulatta GN=HOPX PE=3 SV=1
11 : G1RC03_NOMLE 0.85 0.94 1 72 15 86 72 0 0 86 G1RC03 Uncharacterized protein (Fragment) OS=Nomascus leucogenys GN=HOPX PE=3 SV=1
12 : G3RUB5_GORGO 0.85 0.94 1 72 2 73 72 0 0 73 G3RUB5 Uncharacterized protein OS=Gorilla gorilla gorilla GN=101134903 PE=3 SV=1
13 : H0W113_CAVPO 0.85 0.94 1 72 2 73 72 0 0 73 H0W113 Uncharacterized protein OS=Cavia porcellus GN=HOPX PE=3 SV=1
14 : H2PDC4_PONAB 0.85 0.94 1 72 16 87 72 0 0 87 H2PDC4 Uncharacterized protein OS=Pongo abelii GN=HOPX PE=3 SV=1
15 : HOP_HUMAN 0.85 0.94 1 72 2 73 72 0 0 73 Q9BPY8 Homeodomain-only protein OS=Homo sapiens GN=HOPX PE=1 SV=1
16 : I7GIM6_MACFA 0.85 0.94 1 72 2 73 72 0 0 73 I7GIM6 Macaca fascicularis brain cDNA clone: QflA-21116, similar to human homeodomain-only protein (HOP), transcript variant 1, mRNA, RefSeq: NM_032495.3 OS=Macaca fascicularis PE=3 SV=1
17 : J9NZB1_CANFA 0.85 0.96 1 72 2 73 72 0 0 73 J9NZB1 Uncharacterized protein OS=Canis familiaris GN=HOPX PE=3 SV=1
18 : L5JYU8_PTEAL 0.85 0.96 1 72 2 73 72 0 0 73 L5JYU8 Homeodomain-only protein OS=Pteropus alecto GN=PAL_GLEAN10016131 PE=3 SV=1
19 : W5P457_SHEEP 0.83 0.94 1 65 2 66 65 0 0 73 W5P457 Uncharacterized protein OS=Ovis aries GN=HOPX PE=4 SV=1
20 : L5M7X0_MYODS 0.82 0.93 1 72 2 73 72 0 0 73 L5M7X0 Homeodomain-only protein OS=Myotis davidii GN=MDA_GLEAN10015812 PE=3 SV=1
21 : F7ISK8_CALJA 0.79 0.90 1 72 2 72 72 1 1 72 F7ISK8 Uncharacterized protein OS=Callithrix jacchus GN=HOPX PE=3 SV=1
22 : G1N8X9_MELGA 0.79 0.90 1 72 2 73 72 0 0 73 G1N8X9 Uncharacterized protein OS=Meleagris gallopavo GN=HOPX PE=3 SV=1
23 : HOP_CHICK 0.79 0.90 1 72 2 73 72 0 0 73 Q8JHU0 Homeodomain-only protein OS=Gallus gallus GN=HOPX PE=3 SV=1
24 : S7PXP8_MYOBR 0.79 0.91 3 72 4 73 70 0 0 73 S7PXP8 Homeodomain-only protein OS=Myotis brandtii GN=D623_10009825 PE=3 SV=1
25 : H9G6E0_ANOCA 0.78 0.90 1 72 2 73 72 0 0 73 H9G6E0 Uncharacterized protein OS=Anolis carolinensis GN=HOPX PE=3 SV=1
26 : F6QDJ5_ORNAN 0.77 0.89 2 72 2 72 71 0 0 72 F6QDJ5 Uncharacterized protein OS=Ornithorhynchus anatinus GN=HOPX PE=3 SV=1
27 : U3JW75_FICAL 0.77 0.87 3 72 4 73 70 0 0 73 U3JW75 Uncharacterized protein OS=Ficedula albicollis GN=HOPX PE=3 SV=1
28 : R0JBX5_ANAPL 0.76 0.89 1 72 2 73 72 0 0 73 R0JBX5 Homeodomain-only protein (Fragment) OS=Anas platyrhynchos GN=Anapl_13328 PE=3 SV=1
29 : U3IMB9_ANAPL 0.76 0.89 1 72 2 73 72 0 0 73 U3IMB9 Uncharacterized protein OS=Anas platyrhynchos GN=HOPX PE=3 SV=1
30 : G3U7B2_LOXAF 0.73 0.90 2 72 2 72 71 0 0 72 G3U7B2 Uncharacterized protein OS=Loxodonta africana GN=HOPX PE=3 SV=1
31 : F7D1F4_MONDO 0.72 0.82 1 72 97 168 72 0 0 168 F7D1F4 Uncharacterized protein (Fragment) OS=Monodelphis domestica GN=HOPX PE=3 SV=2
32 : I3IZ20_ORENI 0.70 0.83 10 72 13 75 63 0 0 75 I3IZ20 Uncharacterized protein OS=Oreochromis niloticus GN=LOC100698211 PE=3 SV=1
33 : K7F5M1_PELSI 0.69 0.88 1 72 2 73 72 0 0 73 K7F5M1 Uncharacterized protein OS=Pelodiscus sinensis GN=HOPX PE=3 SV=1
34 : W5K924_ASTMX 0.69 0.83 9 72 84 147 64 0 0 147 W5K924 Uncharacterized protein OS=Astyanax mexicanus PE=4 SV=1
35 : HOP_DANRE 0.67 0.79 10 72 15 77 63 0 0 77 Q8AYB8 Homeodomain-only protein OS=Danio rerio GN=hopx PE=3 SV=1
36 : B5XBT5_SALSA 0.63 0.81 10 72 13 75 63 0 0 75 B5XBT5 Homeodomain-only protein OS=Salmo salar GN=HOP PE=3 SV=1
37 : W5MTE7_LEPOC 0.63 0.76 10 72 18 80 63 0 0 80 W5MTE7 Uncharacterized protein OS=Lepisosteus oculatus PE=4 SV=1
38 : F7EU10_MACMU 0.61 0.80 1 64 2 65 64 0 0 93 F7EU10 Uncharacterized protein OS=Macaca mulatta GN=HOPX PE=4 SV=1
39 : G3QPN6_GORGO 0.60 0.75 1 66 20 86 67 1 1 112 G3QPN6 Uncharacterized protein OS=Gorilla gorilla gorilla GN=101134903 PE=4 SV=1
40 : G3SAU5_GORGO 0.60 0.75 1 66 15 81 67 1 1 107 G3SAU5 Uncharacterized protein (Fragment) OS=Gorilla gorilla gorilla GN=101134903 PE=4 SV=1
41 : H2QPI5_PANTR 0.60 0.75 1 66 20 86 67 1 1 112 H2QPI5 Uncharacterized protein (Fragment) OS=Pan troglodytes GN=HOPX PE=4 SV=1
42 : H3A2H1_LATCH 0.60 0.82 11 72 19 80 62 0 0 80 H3A2H1 Uncharacterized protein OS=Latimeria chalumnae PE=3 SV=1
43 : H3C8B2_TETNG 0.60 0.77 11 72 16 77 62 0 0 77 H3C8B2 Uncharacterized protein (Fragment) OS=Tetraodon nigroviridis PE=3 SV=1
44 : G3PWY0_GASAC 0.59 0.76 10 72 99 161 63 0 0 161 G3PWY0 Uncharacterized protein (Fragment) OS=Gasterosteus aculeatus PE=3 SV=1
45 : Q0V9C1_XENTR 0.59 0.87 2 72 10 80 71 0 0 80 Q0V9C1 Hopx protein OS=Xenopus tropicalis GN=hopx PE=3 SV=1
46 : M7B0H6_CHEMY 0.56 0.71 1 63 116 169 63 1 9 194 M7B0H6 Homeodomain-only protein OS=Chelonia mydas GN=UY3_17348 PE=4 SV=1
47 : W5U6C1_ICTPU 0.55 0.79 11 72 18 79 62 0 0 79 W5U6C1 Homeodomain-only protein OS=Ictalurus punctatus GN=hopx PE=4 SV=1
48 : F7HNP0_CALJA 0.51 0.62 1 70 2 71 71 2 2 90 F7HNP0 Uncharacterized protein OS=Callithrix jacchus GN=HOPX PE=4 SV=1
49 : L9KP70_TUPCH 0.46 0.63 1 67 51 113 67 1 4 157 L9KP70 Homeodomain-only protein OS=Tupaia chinensis GN=TREES_T100001523 PE=4 SV=1
50 : Q4S3T0_TETNG 0.43 0.62 9 71 1066 1124 63 1 4 1175 Q4S3T0 Chromosome 20 SCAF14744, whole genome shotgun sequence OS=Tetraodon nigroviridis GN=GSTENG00024513001 PE=4 SV=1
51 : E9GY16_DAPPU 0.42 0.62 11 65 23 76 55 1 1 83 E9GY16 Putative uncharacterized protein OS=Daphnia pulex GN=DAPPUDRAFT_323148 PE=3 SV=1
52 : K7IPG4_NASVI 0.40 0.73 11 65 119 173 55 0 0 180 K7IPG4 Uncharacterized protein OS=Nasonia vitripennis PE=3 SV=1
53 : E2A7S6_CAMFO 0.38 0.71 9 66 1010 1067 58 0 0 1071 E2A7S6 Uncharacterized protein C20orf26 OS=Camponotus floridanus GN=EAG_05615 PE=3 SV=1
54 : E2BP72_HARSA 0.38 0.71 11 66 24 79 56 0 0 83 E2BP72 Homeodomain-only protein OS=Harpegnathos saltator GN=EAI_00197 PE=3 SV=1
55 : F4WRC1_ACREC 0.38 0.71 11 66 26 81 56 0 0 85 F4WRC1 Homeodomain-only protein OS=Acromyrmex echinatior GN=G5I_08367 PE=3 SV=1
56 : H9KHM0_APIME 0.38 0.71 11 66 53 108 56 0 0 112 H9KHM0 Uncharacterized protein (Fragment) OS=Apis mellifera PE=3 SV=2
57 : J9LXD3_ACYPI 0.38 0.73 1 64 14 76 64 1 1 82 J9LXD3 Uncharacterized protein OS=Acyrthosiphon pisum GN=LOC100570516 PE=3 SV=1
58 : V9IIH8_APICE 0.38 0.71 11 66 67 122 56 0 0 126 V9IIH8 Homeobox only domain OS=Apis cerana GN=ACCB10610 PE=2 SV=1
## ALIGNMENTS 1 - 58
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A G 0 0 138 37 44 SSSSSSSSSSSSSSSSSSSSSAA S DD S A SSSS A ST A
2 2 A S + 0 0 131 40 42 AAATTTAAAAAAAAAAAATAATT TA AAST T AAAA GT AS A
3 3 A E - 0 0 154 42 40 QQEEEEEEEEEEEEEEEDEEKEEEETEEEAE E EEEE SE KH N
4 4 A G + 0 0 85 42 68 TTPTTTPTTTTTPTTTTTTTTKKTKEKKKEE Q TTTT DQ TR N
5 5 A A - 0 0 70 42 54 AAAAAAAAAAAATAAAAAAAASSAASPPPTV P AAAA SP AD N
6 6 A A - 0 0 90 42 80 SSSSSSNSSTSSSSSTSSSSNVVSVAVVVAN R TSSS TM NR I
7 7 A T - 0 0 136 42 43 GGGGGGGGGGGGGGGGGGGGGTTGSGITTNG G GGGG GG GV P
8 8 A M - 0 0 66 42 44 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPVL P PPPP LP PG L
9 9 A T > - 0 0 78 45 29 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTPT TA TTTT TT TQS T S
10 10 A E H > S+ 0 0 118 50 37 EEEEEEEEEEEEEEEEEEEQEEEQEAEEETQQAEEEEEEEE ENE EDK V D
11 11 A D H > S+ 0 0 110 59 18 DDDDDDDDDDDDDDDDDDDDDEEDEDEEEEDDEEDDDDDDDEEEQEDDQEDDDDDDED
12 12 A Q H > S+ 0 0 35 59 10 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQDQQQQQQQQQQQQQQQQQQEQQQQQQQVQ
13 13 A V H X S+ 0 0 38 59 57 VVVVVVVVVVVVVVVVVVVVVLLVVLLLLLVILVVIIVVVVLIVILLVLIEEEEEELE
14 14 A E H X S+ 0 0 111 59 51 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAERKKKEEEEQAKEEREEASAAAAAEA
15 15 A I H X S+ 0 0 43 59 29 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIITIIVVISIIIILVVVIVITVAVVVVVVV
16 16 A L H < S+ 0 0 0 59 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
17 17 A E H >X S+ 0 0 74 59 17 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDQQQQQEQ
18 18 A Y H 3X S+ 0 0 135 59 82 YYYYYYYYYYYYYYYYYYYYYYYYYHYYYYLEHEEEEYYYYEDDYYEYYDMEEEEESE
19 19 A N H 3< S+ 0 0 19 59 33 NNNNNNNNNNNNNNNNNNNNNNNNNNHNNNNNNNNNNNNNNNNSNNNNNNHQQQQQQQ
20 20 A F H <4 S+ 0 0 7 59 0 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
21 21 A N H < S+ 0 0 98 59 47 NNNNNNNNNNNNNNNNSNNNNCCNNNCCCNNNSTTTLNNNNKNKNSSNYNNNNNNNNN
22 22 A K S < S+ 0 0 132 59 24 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKKRKKRKKKKKRKKNKRKKKRRRRRRKR
23 23 A V S S- 0 0 66 59 62 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVLGVVVVVGVVVVVIVVVGVVINWWWWWVW
24 24 A N - 0 0 47 58 68 NNNNNNNNNDDDNDDDNNNNHNNNNNNNNNNSNTSSSDDDDSSTSNG.NSKPPPPPKP
25 25 A K S S+ 0 0 61 59 27 KKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKKRHKKTKRRRRTR
26 26 A H S S+ 0 0 139 59 53 HHHHHHHHHHHHHHHHHHHHRHHHHHHHHHYHHHHHHHHHHQHHQHNKHHMNAAAALA
27 27 A P - 0 0 17 58 8 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPRPPHPPPPP.P
28 28 A D >> - 0 0 78 58 37 DDDDDDDDDDDDDDDDDDDD.DDDDDDDDDDDDDDDDDDDDEDEHDDPDDAHHHHHHH
29 29 A P H 3> S+ 0 0 91 59 66 PPPPPPPPPSSSPSSSPPPPTPPSPPPPPPPGPQEEQSSSSQGGNPGTPGSKTTTTST
30 30 A T H 3> S+ 0 0 101 59 50 TTTTTTTTTTTTTTTTTTTTTTTTASTTTLTTTTTSATTTTAMMTTATTMDAAAAATA
31 31 A T H <> S+ 0 0 38 59 43 TTTTTTTTTTTTPTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTSTTTMTVDDDDDDD
32 32 A L H X S+ 0 0 9 59 21 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLILLLLLAVIVVILI
33 33 A C H X S+ 0 0 59 59 76 CCCCCCCCCCCCCCCCCCCLCCCLCCCCCCLMCMMMMCCCCIMMMCACCMIVVVVVEV
34 34 A L H X S+ 0 0 112 59 4 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLILLLLLLLLLLLLLLLLLLLLLLLLLLIL
35 35 A I H X S+ 0 0 1 59 21 IIIIIIIIIIIIIIIIIIIIIIIIIVIIIIIIVIIIIIIIIIIIIIIIIISLLLLLIL
36 36 A A H X>S+ 0 0 6 58 5 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAMA.AAAAAAA
37 37 A A H <5S+ 0 0 85 59 6 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAAAAATAAAAAAAA
38 38 A E H <5S+ 0 0 129 59 4 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEETEEEEEEEEE
39 39 A A H <5S- 0 0 22 59 58 AAAAAAAAAAAAAAAAAAAAATTAAATTTAVCAACSCAAAACCCTACAACTTTTTTLT
40 40 A G T <5S+ 0 0 56 59 1 GGGGGGGGGGGGGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
41 41 A L < - 0 0 22 59 3 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLFLLLLLLLVL
42 42 A T > - 0 0 80 59 32 TTSSSSSSSSSSSSSSSSSSSSSSTTSSSSTSSTSTSSSSSSTTTSSSSTSSSSSSRS
43 43 A E H > S+ 0 0 83 59 6 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEEEEDE
44 44 A E H > S+ 0 0 137 59 24 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAAANA
45 45 A Q H > S+ 0 0 89 59 26 QQEEEEEEEEEEEEEEEEEEEQQEEEQQQEQEEEQEDEEEEEEEEEEEEEQDDDDDDD
46 46 A T H X S+ 0 0 0 59 37 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTITVVVVVVVV
47 47 A Q H X S+ 0 0 110 59 69 QQQQQQQQQQQQQQQQQQQQQLLQLLLLLLEQLAAAAQQQQVLLKLLQQLQQEEEEKE
48 48 A K H X S+ 0 0 111 59 63 KKKKKKKKKKKKKKKKKKKKKKKKRKKKKKKKKKVKKTGGGKEKKPKGKVQDGGGAMA
49 49 A W H X S+ 0 0 26 59 16 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWLsssWWWWYWrWSWWWWWWWW
50 50 A F H X S+ 0 0 7 56 13 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFVlllFFFF.Fm..FYYYYYYY
51 51 A K H X S+ 0 0 147 56 71 KKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKQRRRQVIIIKKNK.RI..LSAAASTS
52 52 A Q H >X S+ 0 0 136 56 85 QQQQQQQQQQQQQQQQQQQQEQQQKKQQQQQLQKMLLISSSQLIE.MT..FLIIIINI
53 53 A R H >X S+ 0 0 109 56 7 RRRRRRRRRRRRRRRRRRRRRRRHRRRRRRRRRRRRRPRRRRRRR.RR..RKRRRRRR
54 54 A L H 3X S+ 0 0 9 58 60 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLNLNNNNRSSSYNNL.NSLTLLLLLLLL
55 55 A A H << S+ 0 0 68 58 28 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAASKKKSAQA.AKMAAAAAAAAA
56 56 A E H XX S+ 0 0 143 58 56 EEQQQQQQQKKKQKKKQQQQEEEQEQEQQQQQEQQRKKIIIKQQK.QIQDSQQQQQAQ
57 57 A W H 3X S+ 0 0 57 58 20 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWIWWWWWWW.WWHTWLWWWWWW
58 58 A R H 3X S+ 0 0 107 58 20 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRWHHHRRRR.RYQHRRRRRRRR
59 59 A R H <4 S+ 0 0 219 59 61 RRRRRQRQQRRRRRRRQQRKRKKKKRKKKQQQRQKQQHPPPEQQESQPAGKKKKKKRK
60 60 A S H < S+ 0 0 102 59 55 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSASAASPEEESAESPAEGEEEEEEESE
61 61 A E H < S- 0 0 134 59 38 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEESSSEEEEDESGDQQQQQQQQ
62 62 A G < - 0 0 47 59 13 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGSSSSGGGGPGAGGGGGGGGGG
63 63 A L - 0 0 99 59 25 LLLLLLLLLLLLLLLLLLPLLLLLLLLLLLLLLLLLLSPPPLLLLLLLLTLLLLLLLL
64 64 A P - 0 0 124 58 48 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPQQQPPPP PKRGGGGGGGSG
65 65 A S - 0 0 95 56 63 SSSSSSSSSSSSSSSSSSPSSSSSSSSSSSSAAAAAA RRRPAAR AGINPGGGGG G
66 66 A E + 0 0 209 53 46 EEEEEEEEEEEEEEEEEE EEEEEEEEEEEKKEEEQE EEEEKEH QPAG NNNN N
67 67 A C - 0 0 79 45 74 CCCCCCCCCCCCCCCCCC VCCCSSCSSSCCQCLLLL SLLC PHCS
68 68 A R + 0 0 242 44 76 RRRRRRRRRRRRRRRRRR RRGGRGGGGGRGGGGGGG GGGG GD S
69 69 A S - 0 0 65 44 4 SSSSSSSSSSSSSSSSSS SSSSSSSSSSSSSSSSSS SSSS SS C
70 70 A V S S+ 0 0 153 44 3 VVVVVVVVVVVVVVVVVV VVVVVVVVVVVVVVVVVV VVVV VL V
71 71 A T 0 0 126 43 74 TTTTTTTTTTTTTTTTTT TTRRPRTRRRTRLRKKKK KLLM K T
72 72 A D 0 0 187 42 0 DDDDDDDDDDDDDDDDDD DDDDDDDDDDDDDDDDDD DDDD D
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 3 14 0 76 3 0 0 0 0 0 0 0 5 37 0 0 0.834 27 0.56
2 2 A 0 0 0 0 0 0 0 3 65 0 8 25 0 0 0 0 0 0 0 0 40 0 0 0.913 30 0.57
3 3 A 0 0 0 0 0 0 0 0 2 0 2 2 0 2 0 5 5 76 2 2 42 0 0 1.031 34 0.59
4 4 A 0 0 0 0 0 0 0 2 0 7 0 57 0 0 2 14 5 7 2 2 42 0 0 1.476 49 0.31
5 5 A 2 0 0 0 0 0 0 0 67 12 10 5 0 0 0 0 0 0 2 2 42 0 0 1.160 38 0.46
6 6 A 14 0 2 2 0 0 0 0 7 0 50 10 0 0 5 0 0 0 10 0 42 0 0 1.584 52 0.20
7 7 A 2 0 2 0 0 0 0 76 0 2 2 12 0 0 0 0 0 0 2 0 42 0 0 0.906 30 0.56
8 8 A 2 7 0 2 0 0 0 2 0 86 0 0 0 0 0 0 0 0 0 0 42 0 0 0.588 19 0.56
9 9 A 0 0 0 0 0 0 0 0 2 2 4 89 0 0 0 0 2 0 0 0 45 0 0 0.497 16 0.70
10 10 A 2 0 0 0 0 0 0 0 4 0 0 2 0 0 0 2 8 76 2 4 50 0 0 0.981 32 0.62
11 11 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 25 0 71 59 0 0 0.705 23 0.82
12 12 A 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 95 2 0 2 59 0 0 0.257 8 0.89
13 13 A 56 22 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 59 0 0 1.144 38 0.43
14 14 A 0 0 0 0 0 0 0 0 15 0 2 0 0 0 3 7 2 71 0 0 59 0 0 0.964 32 0.48
15 15 A 24 2 68 0 0 0 0 0 2 0 2 3 0 0 0 0 0 0 0 0 59 0 0 0.927 30 0.70
16 16 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59 0 0 0.000 0 1.00
17 17 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 88 0 2 59 0 0 0.413 13 0.82
18 18 A 0 2 0 2 0 0 64 0 0 0 2 0 0 3 0 0 0 22 0 5 59 0 0 1.090 36 0.17
19 19 A 0 0 0 0 0 0 0 0 0 0 2 0 0 3 0 0 12 0 83 0 59 0 0 0.591 19 0.67
20 20 A 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59 0 0 0.000 0 1.00
21 21 A 0 2 0 0 0 0 2 0 0 0 7 5 8 0 0 3 0 0 73 0 59 0 0 1.027 34 0.53
22 22 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 78 0 0 2 0 59 0 0 0.587 19 0.76
23 23 A 78 2 3 0 0 10 0 5 0 0 0 0 0 0 0 0 0 0 2 0 59 1 0 0.831 27 0.37
24 24 A 0 0 0 0 0 0 0 2 0 10 14 3 0 2 0 3 0 0 48 17 58 0 0 1.535 51 0.32
25 25 A 0 0 0 0 0 0 0 0 0 0 0 3 0 2 14 81 0 0 0 0 59 0 0 0.623 20 0.72
26 26 A 0 2 0 2 0 0 2 0 8 0 0 0 0 76 2 2 3 0 3 0 59 1 0 0.991 33 0.46
27 27 A 0 0 0 0 0 0 0 0 0 97 0 0 0 2 2 0 0 0 0 0 58 1 0 0.174 5 0.92
28 28 A 0 0 0 0 0 0 0 0 2 2 0 0 0 14 0 0 0 3 0 79 58 0 0 0.713 23 0.62
29 29 A 0 0 0 0 0 0 0 8 0 46 22 12 0 0 0 2 5 3 2 0 59 0 0 1.557 51 0.33
30 30 A 0 2 0 5 0 0 0 0 17 0 3 71 0 0 0 0 0 0 0 2 59 0 0 0.947 31 0.50
31 31 A 2 0 0 2 0 0 0 0 0 2 2 81 0 0 0 0 0 0 0 12 59 0 0 0.697 23 0.57
32 32 A 5 86 7 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 59 0 0 0.529 17 0.79
33 33 A 10 5 3 15 0 0 0 0 2 0 0 0 63 0 0 0 0 2 0 0 59 0 0 1.216 40 0.24
34 34 A 0 97 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59 0 0 0.148 4 0.96
35 35 A 3 10 85 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 59 1 0 0.557 18 0.79
36 36 A 0 0 0 2 0 0 0 0 98 0 0 0 0 0 0 0 0 0 0 0 58 0 0 0.087 2 0.95
37 37 A 0 0 0 0 0 0 0 0 97 0 0 3 0 0 0 0 0 0 0 0 59 0 0 0.148 4 0.93
38 38 A 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 98 0 0 59 0 0 0.086 2 0.95
39 39 A 2 2 0 0 0 0 0 0 59 0 2 22 14 0 0 0 0 0 0 0 59 0 0 1.121 37 0.42
40 40 A 0 0 0 0 0 0 0 98 0 0 2 0 0 0 0 0 0 0 0 0 59 0 0 0.086 2 0.98
41 41 A 2 97 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59 0 0 0.172 5 0.96
42 42 A 0 0 0 0 0 0 0 0 0 0 78 20 0 0 2 0 0 0 0 0 59 0 0 0.587 19 0.68
43 43 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 97 0 2 59 0 0 0.172 5 0.94
44 44 A 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 90 2 0 59 0 0 0.375 12 0.76
45 45 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 68 0 14 59 0 0 0.848 28 0.74
46 46 A 14 0 2 0 0 0 0 0 0 0 0 85 0 0 0 0 0 0 0 0 59 0 0 0.480 16 0.63
47 47 A 2 24 0 0 0 0 0 0 7 0 0 0 0 0 0 3 54 10 0 0 59 0 0 1.272 42 0.31
48 48 A 3 0 0 2 0 0 0 12 3 2 0 2 0 0 2 69 2 2 0 2 59 0 0 1.219 40 0.37
49 49 A 0 2 0 0 0 88 2 0 0 0 7 0 0 0 2 0 0 0 0 0 59 3 4 0.501 16 0.83
50 50 A 2 5 0 2 79 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 56 0 0 0.750 25 0.87
51 51 A 2 2 7 0 0 0 0 0 5 0 5 2 0 0 7 63 4 0 4 0 56 0 0 1.438 48 0.29
52 52 A 0 9 13 4 2 0 0 0 0 0 5 2 0 0 0 5 55 4 2 0 56 0 0 1.570 52 0.15
53 53 A 0 0 0 0 0 0 0 0 0 2 0 0 0 2 95 2 0 0 0 0 56 0 0 0.268 8 0.92
54 54 A 0 74 0 0 0 0 2 0 0 0 7 2 0 0 2 0 0 0 14 0 58 0 0 0.890 29 0.40
55 55 A 0 0 0 2 0 0 0 0 86 0 3 0 0 0 0 7 2 0 0 0 58 0 0 0.569 18 0.71
56 56 A 0 0 7 0 0 0 0 0 2 0 2 0 0 0 2 17 53 16 0 2 58 0 0 1.391 46 0.43
57 57 A 0 2 2 0 0 93 0 0 0 0 0 2 0 2 0 0 0 0 0 0 58 0 0 0.347 11 0.79
58 58 A 0 0 0 0 0 2 2 0 0 0 0 0 0 7 88 0 2 0 0 0 58 0 0 0.508 16 0.79
59 59 A 0 0 0 0 0 0 0 2 2 7 2 0 0 2 32 27 24 3 0 0 59 0 0 1.634 54 0.38
60 60 A 0 0 0 0 0 0 0 2 8 3 64 0 0 0 0 0 0 22 0 0 59 0 0 1.010 33 0.44
61 61 A 0 0 0 0 0 0 0 2 0 0 7 0 0 0 0 0 14 75 0 3 59 0 0 0.856 28 0.62
62 62 A 0 0 0 0 0 0 0 90 2 2 7 0 0 0 0 0 0 0 0 0 59 0 0 0.417 13 0.86
63 63 A 0 90 0 0 0 0 0 0 0 7 2 2 0 0 0 0 0 0 0 0 59 0 0 0.417 13 0.74
64 64 A 0 0 0 0 0 0 0 14 0 76 2 0 0 0 2 2 5 0 0 0 58 0 0 0.846 28 0.51
65 65 A 0 0 2 0 0 0 0 13 16 5 55 0 0 0 7 0 0 0 2 0 56 0 0 1.370 45 0.36
66 66 A 0 0 0 0 0 0 0 2 2 2 0 0 0 2 0 6 4 74 9 0 53 0 0 1.034 34 0.54
67 67 A 2 13 0 0 0 0 0 0 0 2 16 0 62 2 0 0 2 0 0 0 45 0 0 1.192 39 0.25
68 68 A 0 0 0 0 0 0 0 43 0 0 2 0 0 0 52 0 0 0 0 2 44 0 0 0.874 29 0.24
69 69 A 0 0 0 0 0 0 0 0 0 0 98 0 2 0 0 0 0 0 0 0 44 0 0 0.108 3 0.95
70 70 A 98 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44 0 0 0.108 3 0.96
71 71 A 0 7 0 2 0 0 0 0 0 2 0 56 0 0 19 14 0 0 0 0 43 0 0 1.274 42 0.25
72 72 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 42 0 0 0.000 0 1.00
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
39 50 69 1 sDl
40 50 64 1 sDl
41 50 69 1 sDl
48 49 50 1 rLm
//