Complet list of 1ueo hssp file
Complete list of 1ueo.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1UEO
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-10
HEADER ANTIBIOTIC 20-MAY-03 1UEO
COMPND MOL_ID: 1; MOLECULE: PENAEIDIN-3A; CHAIN: A; SYNONYM: PENAEIDIN-3; ENG
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: LITOPENAEUS VANNAMEI; ORGANISM_COMMON:
AUTHOR Y.YANG,J.PONCET,J.GARNIER,C.ZATYLNY,E.BACHERE,A.AUMELAS
DBREF 1UEO A 1 63 UNP P81058 PEN3A_PENVA 20 82
SEQLENGTH 63
NCHAIN 1 chain(s) in 1UEO data set
NALIGN 40
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : PEN3A_LITVA 1UEO 0.98 1.00 1 63 20 82 63 0 0 82 P81058 Penaeidin-3a OS=Litopenaeus vannamei PE=1 SV=1
2 : PEN3E_LITVA 0.98 1.00 1 63 20 82 63 0 0 82 Q963C9 Penaeidin-3e OS=Litopenaeus vannamei PE=3 SV=1
3 : Q3HNH3_LITVA 0.98 1.00 1 63 20 82 63 0 0 82 Q3HNH3 PEN3-1 OS=Litopenaeus vannamei GN=PEN3-1 PE=4 SV=1
4 : B0FLD5_FENPE 0.97 0.98 1 63 20 82 63 0 0 82 B0FLD5 Pen3-p OS=Fenneropenaeus penicillatus PE=4 SV=1
5 : PEN3B_LITVA 0.97 1.00 1 63 20 82 63 0 0 82 P81059 Penaeidin-3b OS=Litopenaeus vannamei PE=1 SV=1
6 : PEN3D_LITVA 0.97 1.00 1 63 20 82 63 0 0 82 Q963D0 Penaeidin-3d OS=Litopenaeus vannamei PE=3 SV=1
7 : PEN3F_LITVA 0.97 1.00 1 63 20 82 63 0 0 82 Q963C8 Penaeidin-3f OS=Litopenaeus vannamei PE=3 SV=1
8 : PEN3G_LITVA 0.97 1.00 1 63 20 82 63 0 0 82 Q963C7 Penaeidin-3g OS=Litopenaeus vannamei PE=3 SV=1
9 : PEN3I_LITVA 0.97 0.98 1 63 20 82 63 0 0 82 Q963C5 Penaeidin-3i OS=Litopenaeus vannamei PE=3 SV=1
10 : B0FLD4_FENPE 0.95 1.00 1 63 20 82 63 0 0 82 B0FLD4 Pen3-o OS=Fenneropenaeus penicillatus PE=4 SV=1
11 : PEN3C_LITVA 0.95 0.98 1 63 20 81 63 1 1 81 P81060 Penaeidin-3c OS=Litopenaeus vannamei PE=1 SV=1
12 : PEN3H_LITVA 0.95 0.98 1 63 20 82 63 0 0 82 Q963C6 Penaeidin-3h OS=Litopenaeus vannamei PE=3 SV=1
13 : PEN3J_LITVA 0.95 0.98 1 63 20 81 63 1 1 81 Q963D9 Penaeidin-3j OS=Litopenaeus vannamei PE=3 SV=1
14 : Q3HM09_LITVA 0.94 0.98 1 63 20 81 63 1 1 81 Q3HM09 Antimicrobial peptide PEN3-11 OS=Litopenaeus vannamei GN=PEN3-11 PE=4 SV=1
15 : Q4U5R1_LITST 0.67 0.81 1 63 20 79 63 2 3 79 Q4U5R1 PEN 3-2 OS=Litopenaeus stylirostris PE=4 SV=1
16 : PEN3K_LITSE 0.63 0.79 1 63 20 75 63 2 7 75 Q962B2 Penaeidin-3k OS=Litopenaeus setiferus PE=3 SV=1
17 : B8Y3W2_LITSH 0.62 0.78 1 63 20 75 63 2 7 75 B8Y3W2 Penaeidin 3-1 OS=Litopenaeus schmitti GN=PEN3-1 PE=4 SV=1
18 : Q6V4W4_LITST 0.59 0.72 1 63 20 87 68 2 5 87 Q6V4W4 Antimicrobial peptide penaeidin 3 OS=Litopenaeus stylirostris GN=pen3 PE=4 SV=1
19 : Q7Z286_FENCH 0.49 0.62 1 63 18 71 63 2 9 71 Q7Z286 Penaeidin 3-1 OS=Fenneropenaeus chinensis GN=PEN3-1 PE=4 SV=1
20 : A0SE30_FENCH 0.48 0.62 1 63 18 71 63 2 9 71 A0SE30 Penaeidin 3-2 OS=Fenneropenaeus chinensis GN=PEN 3-2 PE=4 SV=1
21 : Q6V4W5_LITST 0.48 0.67 1 60 20 72 60 1 7 72 Q6V4W5 Antimicrobial peptide penaeidin 2 OS=Litopenaeus stylirostris GN=pen2 PE=4 SV=1
22 : Q3HM10_LITVA 0.47 0.63 1 60 20 72 60 1 7 72 Q3HM10 Antimicrobial peptide PEN2-4 OS=Litopenaeus vannamei GN=PEN2-4 PE=4 SV=1
23 : Q56H83_FARPA 0.47 0.67 1 60 20 73 60 2 6 73 Q56H83 Antimicrobial peptide PEN2-2 OS=Farfantepenaeus paulensis GN=PEN2-2 PE=4 SV=1
24 : PEN2D_LITSE 0.46 0.61 4 60 23 72 57 1 7 72 Q962A9 Penaeidin-2d OS=Litopenaeus setiferus PE=3 SV=1
25 : Q56H81_LITSH 0.46 0.61 4 60 23 72 57 1 7 72 Q56H81 Antimicrobial peptide PEN2-2 OS=Litopenaeus schmitti GN=PEN2-2 PE=4 SV=1
26 : K7W919_FENIN 0.45 0.62 1 60 18 71 60 2 6 71 K7W919 Penaeidin OS=Fenneropenaeus indicus PE=4 SV=1
27 : PEN2A_LITVA 0.45 0.65 1 60 20 72 60 1 7 72 P81057 Penaeidin-2a OS=Litopenaeus vannamei PE=1 SV=1
28 : PEN2B_LITVA 0.45 0.63 1 60 20 72 60 1 7 72 Q963C4 Penaeidin-2b OS=Litopenaeus vannamei PE=3 SV=1
29 : Q3HNH5_LITVA 0.45 0.65 1 60 20 72 60 1 7 72 Q3HNH5 PEN2-1 OS=Litopenaeus vannamei GN=PEN2-1 PE=4 SV=1
30 : Q56H80_LITSH 0.45 0.57 1 58 18 67 60 3 12 67 Q56H80 Antimicrobial peptide PEN4-1 OS=Litopenaeus schmitti GN=PEN4-1 PE=4 SV=1
31 : Q56H84_FARPA 0.45 0.65 1 60 20 73 60 2 6 73 Q56H84 Antimicrobial peptide PEN2-1 OS=Farfantepenaeus paulensis GN=PEN2-1 PE=4 SV=1
32 : U3PU76_9EUCA 0.45 0.62 1 60 18 71 60 2 6 71 U3PU76 Penaeidin OS=Metapenaeus monoceros PE=4 SV=1
33 : Q56H82_LITSH 0.44 0.59 2 60 21 72 59 1 7 72 Q56H82 Antimicrobial peptide PEN2-1 OS=Litopenaeus schmitti GN=PEN2-1 PE=4 SV=1
34 : PEN4C_LITVA 0.43 0.53 1 58 18 67 60 2 12 67 Q963C3 Penaeidin-4c OS=Litopenaeus vannamei PE=3 SV=1
35 : PEN4A_LITVA 0.42 0.52 1 58 18 67 60 2 12 67 Q95NT0 Penaeidin-4a OS=Litopenaeus vannamei PE=3 SV=1
36 : Q3HNH4_LITVA 0.42 0.52 1 58 18 67 60 2 12 67 Q3HNH4 PEN4-1 OS=Litopenaeus vannamei GN=PEN4-1 PE=4 SV=1
37 : A4UMS2_FARSU 0.40 0.62 1 60 20 73 60 2 6 73 A4UMS2 Penaeidin OS=Farfantepenaeus subtilis PE=4 SV=1
38 : PEN4D_LITSE 1XV3 0.40 0.52 1 58 18 67 60 2 12 67 Q962A7 Penaeidin-4d OS=Litopenaeus setiferus PE=1 SV=1
39 : Q6H2Z5_PENMO 0.40 0.58 1 62 20 74 62 2 7 74 Q6H2Z5 Penaeidin OS=Penaeus monodon GN=PEN3a PE=4 SV=1
40 : A4UMS5_FARBR 0.38 0.58 1 60 18 71 60 2 6 71 A4UMS5 Penaeidin OS=Farfantepenaeus brasiliensis PE=4 SV=1
## ALIGNMENTS 1 - 40
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A Q 0 0 209 38 24 QQQQQQQQQQQQQQQQQQQQEEH QEEEQHQ QQQHQQQ
2 2 A V - 0 0 107 39 57 VVVVVVVVVVVVVVGGGGGGAAG GAAAGGGAGGGGGGG
3 3 A Y - 0 0 230 39 39 YYYYYYYYYYYYYYYYYYQQYYY YYYYHYYHYHHYHYH
4 4 A K - 0 0 161 41 45 KKKKKKKKKKKKKKKKKKKKRRKRRKRRRSKKRSSSKSQR
5 5 A G S S+ 0 0 74 41 21 GGGGGGGGGGGGGGGGGGGSGGGGGGGGGSGGGSSSSSGG
6 6 A G - 0 0 34 41 16 GGGGGGGGGGGGGGGPPGGGGGGGGTGGGGGTGGGGGGGG
7 7 A Y S S- 0 0 202 41 1 YYYYYYYYYYYYYYYYYYYYYYYFFYYYYYYYFYYYYYYY
8 8 A A S S+ 0 0 98 41 2 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
9 9 A R S S- 0 0 165 41 54 RRRRRRRRRRRRRRGRRGRRGGRGGRGGGRRRGRRRRRRR
10 10 A P S S- 0 0 98 40 0 PPPPPPPPPPPPPPPP.PPPPPPPPPPPPPPPPPPPPPPP
11 11 A I S S- 0 0 140 40 34 IIIIVIIIIVIIVVVI.VIIIIFIIFIIILFFILLLFLFF
12 12 A P - 0 0 53 41 43 PPPPPPPPPPPPPPVLPVSSPPSPPSPPPPSSPPPPSRPP
13 13 A R - 0 0 191 41 19 RRRRRRRRRRRRRRRRIRRRRRRRRRRRRKRRRKKKRKRR
14 14 A P - 0 0 88 36 7 PPPPPPPPPP.P....LpPPPPPPPPPPPpPPPpppPpPP
15 15 A P - 0 0 107 30 13 PPPPPPPPPPPPPP..Rr..PP.PP.PPPp..Pppp.p..
16 16 A P - 0 0 103 41 40 PPPPPPPPPPPPPPPPPPPPPPPPPTPPPIPTPIIIPIPP
17 17 A F - 0 0 177 41 47 FFFFFFFFFFFFFFFYYIYYYIFHHGIIIFFGHFFFFFYY
18 18 A V - 0 0 105 41 66 VVVVVVVVVVVVVVVVVGGGGGGGGTGGGIGTGIIIGIGG
19 19 A R - 0 0 208 41 44 RRRRRRRRRRRRRRRRRRGGRRGRRRRRRRGRRRRRGRGL
20 20 A P - 0 0 86 40 37 PPPPPPPPPPPPPPP.PpGGPPIPPPPPPPIPPPPPIPGQ
21 21 A L - 0 0 160 18 60 LLLLLLLLLVVLLLI.Vp......................
22 22 A P - 0 0 118 16 71 PPPPPPPPPPPPPP...I......................
23 23 A G - 0 0 81 17 0 GGGGGGGGGGGGGGG..G......................
24 24 A G - 0 0 62 17 90 GGGGGGGGGGGGGGR..R......................
25 25 A P - 0 0 120 18 0 PPPPPPPPPPPPPPPP.P......................
26 26 A I S S+ 0 0 165 24 64 IIIIIIIIIIIIIIVV.V....Y..F....YF....Y..Y
27 27 A G + 0 0 38 26 91 GGGGGGGSGGGGGDVVVV....G..S....RS....R.YR
28 28 A P + 0 0 107 34 25 PPPPPPPPPPPPPPSSSS..PPPPPPPPP.PPP...P.HP
29 29 A Y + 0 0 112 36 77 YYYYYYYYYYYYYYYYYGYYLLVLLSFLF.VSL...V.PV
30 30 A N S S+ 0 0 137 37 83 NNNNNNNNNNNNNNNNNNGGGRRGGVRRRIRVG...R.VR
31 31 A G S S+ 0 0 68 41 78 GGGGGGGGGGGGGGVAAVNNPPPPPTPPPGPTPIIIPIPP
32 32 A a - 0 0 14 41 73 CCCCCCCCRCCCCCCCCCVVVVAIIGVVVCAGIGGGVGVA
33 33 A P > - 0 0 53 41 65 PPPLPPPPPPPPPPPTPPCCCCCCCCCCCDCCCCCCCCCC
34 34 A V T 3 S+ 0 0 87 40 93 VVVVVIIVVVVIVVLLLLTTNNNNNSNNN.NSNDDDNDTN
35 35 A S T 3 S- 0 0 92 41 63 SSSSSSSSSSSSSSSSSSSSHAAAASAAAVASAVVVAVSA
36 36 A b < + 0 0 31 41 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
37 37 A R + 0 0 192 41 88 RRRRRRRRRRRRRRRRRRHHYYYYYHYYYYYHYYYYYYHY
38 38 A G S S+ 0 0 82 41 83 GGGGGGGGGGGGGGGGGGVVRRSRRLRRRGSLRGGGRGRR
39 39 A I S S- 0 0 41 41 26 IIIIIIIIIIIIIIIIIILLLLILLILLLIIILIIILILL
40 40 A S > - 0 0 64 41 50 SSSSSSSSSSSSSSTTTTTTASSSSNSSSPSNSPPPSPSS
41 41 A F H > S+ 0 0 117 41 76 FFFFFFFFFFFFFFTTTTTTFVFFFFVVVSFFFSSSYSPY
42 42 A S H > S+ 0 0 91 41 40 SSSSSSSSSSSSSSLTTLSSPSSSSNSSSSSNSSSSSSLS
43 43 A Q H > S+ 0 0 115 41 55 QQQQQQQQQQQQQQQQQQQQDDDDDDDDDTDDDTTTDTQA
44 44 A A H X S+ 0 0 1 41 14 AAAAAAAAAAAAAAAAAAAAAAAVVAAAAAAAVAAAAAAA
45 45 A R H X S+ 0 0 161 41 40 RRRRRRRRRRRRRRRRRRRRRRLRRVRRRRLVRRRRLRRL
46 46 A S H X S+ 0 0 45 41 82 SSSSSSSSSSSSSSSSSSSSNNNIIANNNLNAILLLNLAN
47 47 A a H X S+ 0 0 13 41 1 CCCCCCCCCCCYCCCCCCCCCCCCCCCCCCCCCCCCCCCC
48 48 A c H X S+ 0 0 37 41 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
49 49 A S H < S+ 0 0 114 41 84 SSSSSSSSSSSSSSSTTSSSSITNNWIIIFTWNFFFTFRT
50 50 A R H < S- 0 0 188 41 35 RRRRRRRRRRRRRRRRRRRRRRRFFRKKKRRRFRRRRRQK
51 51 A L H < S- 0 0 98 41 23 LLLLLLLLLLLLLLLLLLFFFFFLLLFFFYFLLYYYFYLF
52 52 A G S < S+ 0 0 43 41 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
53 53 A R + 0 0 86 41 57 RRRRRRRRRRRRRRRRRRRRRSRKKRSSSDRRKDDDSDRS
54 54 A b S S+ 0 0 11 41 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
55 55 A c + 0 0 72 41 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
56 56 A H S S+ 0 0 149 41 41 HHHHHHHHHHHHHHRHHRVVHHQHHSHHHHQSHHHHHHDH
57 57 A V + 0 0 46 41 71 VVVVVVVVVVVVVVEVVEPPLLILLALLLLIALRRRILAI
58 58 A G + 0 0 64 41 79 GGGGGGGGGGGGGGAAAARRVVRVVVVVVGRVVGGGRGKR
59 59 A K + 0 0 166 36 11 KKKKKKKKKKKKKKKKKKRRKKKKKKKKK KKK K QK
60 60 A G S S- 0 0 68 36 5 GGGGGGGGGGGGGGGGGGGGGGGGGGGGG GGG G TG
61 61 A Y - 0 0 201 22 0 YYYYYYYYYYYYYYYYYYYY Y
62 62 A S 0 0 98 22 13 SSSSSSSSSSSSSSSSSSSS G
63 63 A G 0 0 124 21 0 GGGGGGGGGGGGGGGGGGGG
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 79 13 0 0 38 0 0 0.654 21 0.75
2 2 A 38 0 0 0 0 0 0 46 15 0 0 0 0 0 0 0 0 0 0 0 39 0 0 1.012 33 0.43
3 3 A 0 0 0 0 0 0 79 0 0 0 0 0 0 15 0 0 5 0 0 0 39 0 0 0.623 20 0.60
4 4 A 0 0 0 0 0 0 0 0 0 0 12 0 0 0 22 63 2 0 0 0 41 0 0 0.969 32 0.54
5 5 A 0 0 0 0 0 0 0 83 0 0 17 0 0 0 0 0 0 0 0 0 41 0 0 0.457 15 0.78
6 6 A 0 0 0 0 0 0 0 90 0 5 0 5 0 0 0 0 0 0 0 0 41 0 0 0.387 12 0.83
7 7 A 0 0 0 0 7 0 93 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.262 8 0.99
8 8 A 0 0 0 0 0 0 0 0 2 0 0 98 0 0 0 0 0 0 0 0 41 0 0 0.115 3 0.97
9 9 A 0 0 0 0 0 0 0 24 0 0 0 0 0 0 76 0 0 0 0 0 41 1 0 0.556 18 0.46
10 10 A 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 40 0 0 0.000 0 1.00
11 11 A 15 13 55 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40 0 0 1.178 39 0.66
12 12 A 5 2 0 0 0 0 0 0 0 73 17 0 0 0 2 0 0 0 0 0 41 0 0 0.859 28 0.56
13 13 A 0 0 2 0 0 0 0 0 0 0 0 0 0 0 85 12 0 0 0 0 41 5 0 0.482 16 0.81
14 14 A 0 3 0 0 0 0 0 0 0 97 0 0 0 0 0 0 0 0 0 0 36 9 6 0.127 4 0.92
15 15 A 0 0 0 0 0 0 0 0 0 93 0 0 0 0 7 0 0 0 0 0 30 0 0 0.245 8 0.86
16 16 A 0 0 12 0 0 0 0 0 0 83 0 5 0 0 0 0 0 0 0 0 41 0 0 0.559 18 0.60
17 17 A 0 0 12 0 59 0 17 5 0 0 0 0 0 7 0 0 0 0 0 0 41 0 0 1.211 40 0.52
18 18 A 44 0 12 0 0 0 0 39 0 0 0 5 0 0 0 0 0 0 0 0 41 0 0 1.133 37 0.33
19 19 A 0 2 0 0 0 0 0 15 0 0 0 0 0 0 83 0 0 0 0 0 41 1 0 0.527 17 0.55
20 20 A 0 0 8 0 0 0 0 8 0 82 0 0 0 0 0 0 3 0 0 0 40 22 1 0.639 21 0.63
21 21 A 17 72 6 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 18 2 0 0.855 28 0.39
22 22 A 0 0 6 0 0 0 0 0 0 94 0 0 0 0 0 0 0 0 0 0 16 0 0 0.234 7 0.28
23 23 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0.000 0 1.00
24 24 A 0 0 0 0 0 0 0 88 0 0 0 0 0 0 12 0 0 0 0 0 17 0 0 0.362 12 0.09
25 25 A 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 18 0 0 0.000 0 1.00
26 26 A 13 0 63 0 8 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 1.059 35 0.35
27 27 A 15 0 0 0 0 0 4 54 0 0 12 0 0 0 12 0 0 0 0 4 26 0 0 1.370 45 0.09
28 28 A 0 0 0 0 0 0 0 0 0 85 12 0 0 3 0 0 0 0 0 0 34 0 0 0.491 16 0.74
29 29 A 11 17 0 0 6 0 56 3 0 3 6 0 0 0 0 0 0 0 0 0 36 0 0 1.390 46 0.22
30 30 A 8 0 3 0 0 0 0 16 0 0 0 0 0 0 22 0 0 0 51 0 37 0 0 1.270 42 0.16
31 31 A 5 0 10 0 0 0 0 39 5 32 0 5 0 0 0 0 0 0 5 0 41 0 0 1.548 51 0.22
32 32 A 22 0 7 0 0 0 0 15 7 0 0 0 46 0 2 0 0 0 0 0 41 0 0 1.444 48 0.26
33 33 A 0 2 0 0 0 0 0 0 0 41 0 2 51 0 0 0 0 0 0 2 41 1 0 0.979 32 0.35
34 34 A 30 10 8 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 30 10 40 0 0 1.721 57 0.07
35 35 A 12 0 0 0 0 0 0 0 27 0 59 0 0 2 0 0 0 0 0 0 41 0 0 1.014 33 0.36
36 36 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
37 37 A 0 0 0 0 0 0 41 0 0 0 0 0 0 12 46 0 0 0 0 0 41 0 0 0.978 32 0.12
38 38 A 5 5 0 0 0 0 0 59 0 0 5 0 0 0 27 0 0 0 0 0 41 0 0 1.108 37 0.17
39 39 A 0 32 68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.625 20 0.74
40 40 A 0 0 0 0 0 0 0 0 2 12 66 15 0 0 0 0 0 0 5 0 41 0 0 1.051 35 0.50
41 41 A 10 0 0 0 56 0 5 0 0 2 12 15 0 0 0 0 0 0 0 0 41 0 0 1.327 44 0.23
42 42 A 0 7 0 0 0 0 0 0 0 2 80 5 0 0 0 0 0 0 5 0 41 0 0 0.751 25 0.60
43 43 A 0 0 0 0 0 0 0 0 2 0 0 12 0 0 0 0 54 0 0 32 41 0 0 1.045 34 0.45
44 44 A 7 0 0 0 0 0 0 0 93 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.262 8 0.86
45 45 A 5 10 0 0 0 0 0 0 0 0 0 0 0 0 85 0 0 0 0 0 41 0 0 0.509 17 0.59
46 46 A 0 12 7 0 0 0 0 0 7 0 51 0 0 0 0 0 0 0 22 0 41 0 0 1.315 43 0.18
47 47 A 0 0 0 0 0 0 2 0 0 0 0 0 98 0 0 0 0 0 0 0 41 0 0 0.115 3 0.99
48 48 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
49 49 A 0 0 10 0 12 5 0 0 0 0 49 15 0 0 2 0 0 0 7 0 41 0 0 1.544 51 0.16
50 50 A 0 0 0 0 7 0 0 0 0 0 0 0 0 0 80 10 2 0 0 0 41 0 0 0.684 22 0.64
51 51 A 0 61 0 0 27 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.911 30 0.76
52 52 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
53 53 A 0 0 0 0 0 0 0 0 0 0 15 0 0 0 66 7 0 0 0 12 41 0 0 1.004 33 0.43
54 54 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
55 55 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
56 56 A 5 0 0 0 0 0 0 0 0 0 5 0 0 78 5 0 5 0 0 2 41 0 0 0.873 29 0.58
57 57 A 41 24 10 0 0 0 0 0 7 5 0 0 0 0 7 0 0 5 0 0 41 0 0 1.614 53 0.28
58 58 A 24 0 0 0 0 0 0 49 10 0 0 0 0 0 15 2 0 0 0 0 41 0 0 1.293 43 0.20
59 59 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 92 3 0 0 0 36 0 0 0.340 11 0.88
60 60 A 0 0 0 0 0 0 0 97 0 0 0 3 0 0 0 0 0 0 0 0 36 0 0 0.127 4 0.94
61 61 A 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0.000 0 1.00
62 62 A 0 0 0 0 0 0 0 5 0 0 95 0 0 0 0 0 0 0 0 0 22 0 0 0.185 6 0.87
63 63 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0.000 0 1.00
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
18 15 34 2 pFVr
18 21 42 3 pFVTp
30 15 32 2 pSRp
34 15 32 2 pSRp
35 15 32 2 pSRp
36 15 32 2 pSRp
38 15 32 2 pSRp
//