Complet list of 1u7j hssp file
Complete list of 1u7j.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1U7J
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-10
HEADER DE NOVO PROTEIN 04-AUG-04 1U7J
COMPND MOL_ID: 1; MOLECULE: FOUR-HELIX BUNDLE MODEL; CHAIN: A, B; ENGINEERED:
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; ORGANISM_TAXID: 562;
AUTHOR O.MAGLIO,F.NASTRI,J.R.CALHOUN,S.LAHR,V.PAVONE,W.F.DEGRADO, A.LOMBARDI
DBREF 1U7J A 1 49 PDB 1U7J 1U7J 1 49
DBREF 1U7J B 1 49 PDB 1U7J 1U7J 1 49
SEQLENGTH 49
NCHAIN 2 chain(s) in 1U7J data set
KCHAIN 1 chain(s) used here ; chains(s) : A
NALIGN 43
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : W6LYQ5_9GAMM 0.48 0.52 2 46 85 136 52 2 7 154 W6LYQ5 Bacterioferritin, iron storage and detoxification protein OS=Candidatus Contendobacter odensis Run_B_J11 GN=bfr PE=4 SV=1
2 : Q5SJM6_THET8 0.46 0.63 8 46 66 111 46 2 7 134 Q5SJM6 Bacterioferritin OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=TTHA0982 PE=3 SV=1
3 : Q72K00_THET2 0.46 0.63 8 46 66 111 46 2 7 134 Q72K00 Bacterioferritin OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=TT_C0618 PE=3 SV=1
4 : Q60AT2_METCA 0.44 0.58 2 46 85 136 52 2 7 154 Q60AT2 Bacterioferritin OS=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) GN=bfr-1 PE=3 SV=1
5 : S6AMI5_PSERE 0.44 0.53 2 49 85 139 55 2 7 156 S6AMI5 Bacterioferritin OS=Pseudomonas resinovorans NBRC 106553 GN=bfrB PE=3 SV=1
6 : A9FHZ1_SORC5 0.42 0.53 2 49 85 139 55 2 7 156 A9FHZ1 Bacterioferritin OS=Sorangium cellulosum (strain So ce56) GN=sce1648 PE=3 SV=1
7 : B7A736_THEAQ 0.42 0.60 2 46 85 136 52 2 7 158 B7A736 Bacterioferritin OS=Thermus aquaticus Y51MC23 GN=TaqDRAFT_5239 PE=3 SV=1
8 : B9Z700_9NEIS 0.42 0.56 2 46 85 136 52 2 7 156 B9Z700 Bacterioferritin OS=Pseudogulbenkiania ferrooxidans 2002 GN=FuraDRAFT_3136 PE=3 SV=1
9 : F6DGQ8_THETG 0.42 0.60 2 46 85 136 52 2 7 159 F6DGQ8 Bacterioferritin OS=Thermus thermophilus (strain SG0.5JP17-16) GN=Ththe16_1000 PE=3 SV=1
10 : G2J0W7_PSEUL 0.42 0.56 2 46 85 136 52 2 7 156 G2J0W7 Bacterioferritin OS=Pseudogulbenkiania sp. (strain NH8B) GN=bfr PE=3 SV=1
11 : K8BN32_9ENTR 0.42 0.58 2 46 85 136 52 2 7 158 K8BN32 Bacterioferritin OS=Cronobacter malonaticus 681 GN=BN131_2079 PE=3 SV=1
12 : K8CH15_9ENTR 0.42 0.58 2 46 48 99 52 2 7 121 K8CH15 Bacterioferritin OS=Cronobacter malonaticus 507 GN=BN130_2529 PE=3 SV=1
13 : S4XNX9_SORCE 0.42 0.53 2 49 85 139 55 2 7 156 S4XNX9 Bacterioferritin OS=Sorangium cellulosum So0157-2 GN=SCE1572_10440 PE=3 SV=1
14 : V5TVJ5_CROSK 0.42 0.58 2 46 92 143 52 2 7 165 V5TVJ5 Bacterioferritin OS=Cronobacter sakazakii CMCC 45402 GN=P262_00480 PE=3 SV=1
15 : A7MKI7_CROS8 0.40 0.56 2 49 85 139 55 2 7 158 A7MKI7 Bacterioferritin OS=Cronobacter sakazakii (strain ATCC BAA-894) GN=ESA_04406 PE=3 SV=1
16 : C9Y225_CROTZ 0.40 0.55 2 49 92 146 55 2 7 165 C9Y225 Bacterioferritin OS=Cronobacter turicensis (strain DSM 18703 / LMG 23827 / z3032) GN=bfr PE=3 SV=1
17 : F0BBG3_9XANT 0.40 0.56 2 46 85 136 52 2 7 156 F0BBG3 Bacterioferritin OS=Xanthomonas vesicatoria ATCC 35937 GN=XVE_1435 PE=3 SV=1
18 : F0C736_9XANT 0.40 0.56 2 46 85 136 52 2 7 156 F0C736 Bacterioferritin OS=Xanthomonas gardneri ATCC 19865 GN=XGA_2718 PE=3 SV=1
19 : F5VPG2_CROSK 0.40 0.56 2 49 85 139 55 2 7 158 F5VPG2 Bacterioferritin OS=Cronobacter sakazakii E899 GN=CSE899_15970 PE=3 SV=1
20 : G4T0X7_META2 0.40 0.53 2 49 106 160 55 2 7 175 G4T0X7 Bacterioferritin OS=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) GN=bfr PE=3 SV=1
21 : H8GL55_METAL 0.40 0.51 2 47 85 137 53 2 7 154 H8GL55 Bacterioferritin OS=Methylomicrobium album BG8 GN=Metal_2847 PE=3 SV=1
22 : I2EE00_CROSK 0.40 0.56 2 49 85 139 55 2 7 158 I2EE00 Bacterioferritin OS=Cronobacter sakazakii ES15 GN=ES15_0329 PE=3 SV=1
23 : K7QUP4_THEOS 0.40 0.57 2 47 85 137 53 2 7 159 K7QUP4 Bacterioferritin OS=Thermus oshimai JL-2 GN=Theos_1013 PE=3 SV=1
24 : K8AA69_9ENTR 0.40 0.55 2 49 85 139 55 2 7 158 K8AA69 Bacterioferritin OS=Cronobacter muytjensii 530 GN=BN135_2114 PE=3 SV=1
25 : K8B0H3_9ENTR 0.40 0.55 2 49 85 139 55 2 7 158 K8B0H3 Bacterioferritin OS=Cronobacter dublinensis 582 GN=BN133_2843 PE=3 SV=1
26 : K8B0Z0_9ENTR 0.40 0.55 2 49 85 139 55 2 7 158 K8B0Z0 Bacterioferritin OS=Cronobacter dublinensis 1210 GN=BN134_2696 PE=3 SV=1
27 : K8BB80_9ENTR 0.40 0.55 2 49 85 139 55 2 7 158 K8BB80 Bacterioferritin OS=Cronobacter turicensis 564 GN=BN132_2102 PE=3 SV=1
28 : K8CH09_CROSK 0.40 0.56 2 49 85 139 55 2 7 158 K8CH09 Bacterioferritin OS=Cronobacter sakazakii 701 GN=BN129_2881 PE=3 SV=1
29 : K8CUE1_CROSK 0.40 0.56 2 49 85 139 55 2 7 158 K8CUE1 Bacterioferritin OS=Cronobacter sakazakii 696 GN=BN128_2855 PE=3 SV=1
30 : K8DN90_CROSK 0.40 0.56 2 49 85 139 55 2 7 158 K8DN90 Bacterioferritin OS=Cronobacter sakazakii 680 GN=BN126_3090 PE=3 SV=1
31 : K8DPN6_9ENTR 0.40 0.55 2 49 85 139 55 2 7 158 K8DPN6 Bacterioferritin OS=Cronobacter universalis NCTC 9529 GN=BN136_2247 PE=3 SV=1
32 : M1JQ29_CROSK 0.40 0.56 2 49 85 139 55 2 7 158 M1JQ29 Bacterioferritin OS=Cronobacter sakazakii SP291 GN=CSSP291_20290 PE=3 SV=1
33 : Q7NSM2_CHRVO 0.40 0.51 2 49 85 139 55 2 7 158 Q7NSM2 Bacterioferritin OS=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) GN=bfr PE=3 SV=1
34 : U1A861_9NEIS 0.40 0.51 2 49 85 139 55 2 7 158 U1A861 Bacterioferritin OS=Pseudogulbenkiania ferrooxidans EGD-HP2 GN=O166_02180 PE=3 SV=1
35 : V7ZHC7_9XANT 0.40 0.56 2 46 85 136 52 2 7 156 V7ZHC7 Bacterioferritin OS=Xanthomonas hortorum pv. carotae str. M081 GN=XHC_0510 PE=3 SV=1
36 : W4S5D4_9XANT 0.40 0.56 2 46 85 136 52 2 7 156 W4S5D4 Bacterioferritin OS=Xanthomonas arboricola pv. pruni str. MAFF 311562 GN=bfr2 PE=3 SV=1
37 : W4SHX6_9XANT 0.40 0.56 2 46 85 136 52 2 7 156 W4SHX6 Bacterioferritin OS=Xanthomonas arboricola pv. pruni MAFF 301420 GN=bfr PE=3 SV=1
38 : W4SXS4_9XANT 0.40 0.56 2 46 85 136 52 2 7 156 W4SXS4 Bacterioferritin OS=Xanthomonas arboricola pv. pruni MAFF 301427 GN=bfr PE=3 SV=1
39 : G0ADS2_COLFT 0.38 0.56 2 46 85 136 52 2 7 156 G0ADS2 Bacterioferritin OS=Collimonas fungivorans (strain Ter331) GN=bfr PE=3 SV=1
40 : G8NDD6_9DEIN 0.38 0.57 2 47 85 137 53 2 7 158 G8NDD6 Bacterioferritin OS=Thermus sp. CCB_US3_UF1 GN=TCCBUS3UF1_12230 PE=3 SV=1
41 : B5YGJ5_THEYD 0.37 0.63 1 47 1 51 51 1 4 161 B5YGJ5 Rubrerythrin subfamily OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=THEYE_A1598 PE=4 SV=1
42 : D5C362_NITHN 0.37 0.56 2 46 85 136 52 2 7 154 D5C362 Bacterioferritin OS=Nitrosococcus halophilus (strain Nc4) GN=Nhal_1833 PE=3 SV=1
43 : C6XM81_HIRBI 0.36 0.62 2 49 85 139 55 2 7 158 C6XM81 Bacterioferritin OS=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) GN=Hbal_0322 PE=3 SV=1
## ALIGNMENTS 1 - 43
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A M > 0 0 199 2 0 M
2 2 A D T 3 + 0 0 160 42 9 E EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEE
3 3 A Y T > S+ 0 0 70 42 48 I MMQIMIMMMQMMMMMMMMMIMMMMMMMMMMMMMMMMISVI
4 4 A L T X> S+ 0 0 10 42 9 L LLLLLLLLLLLLLFFLLLLLLLLLLLLLLLLFFFFLLILL
5 5 A R H 3> S+ 0 0 173 42 81 R RAKFEFERRKRRRRRRAERFRRRRRRRRREERRRRQFEEE
6 6 A E H <4 S+ 0 0 110 42 75 G CSSKLKLSSSSSSCCSCCSKSSSSSSSSSCCCCCCCKICA
7 7 A L H X> S+ 0 0 3 42 15 D DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDADD
8 8 A Y H 3X S+ 0 0 73 44 32 LYYLLLYLYLLLLLLLLLLLLLYLLLLLLLLLLLLLLLLYLLL
9 9 A K H 3< S+ 0 0 97 44 72 KEEQKDEKEKNNENNTAANKKNETTTTNNNTNKKAAAAKEKKK
10 10 A L H <> S+ 0 0 18 44 48 LGGLLLGLGLLLLLLLLLLLLLGLLLLLLLLLLLLLLLLGMLL
11 11 A E H X S+ 0 0 2 44 0 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
12 12 A Q H X S+ 0 0 86 44 77 LVVQQYLLILMMYMMMRRMQQMLMMMMMMMMMMMRRRRQLTKH
13 13 A Q H > S+ 0 0 111 44 45 LQQQQHQEQEEENEEEEEEQAEQEEEEEEEEEDEEEEEGQDED
14 14 A A H >X S+ 0 0 1 44 33 AAAAAAAAAAGGAGGGAAGAAGAGGGGGGGGGAAAAAAAAAIA
15 15 A M H 3X S+ 0 0 26 44 67 HVVLVVVLVLAAVAAAVVAVIAVAAAAAAAAALLVVVVQVVLI
16 16 A K H 3< S+ 0 0 131 44 58 PKKPPKKPKPKKKKKKAAKPPKKKKKKKKKKKPPAAAAKKKPP
17 17 A L H XX S+ 0 0 60 44 94 LGGLDRGLGLDDRDDDVVDVLDGDDDDDDDDDLLVVVVTGFLL
18 18 A Y H 3X S+ 0 0 4 44 41 YYYLLLYLYLLLLLLLLLLLLLYLLLLLLLLLLLLLLLVYYLL
19 19 A R H 3< S+ 0 0 145 44 50 RNNRKNNRNRRRNRRRRRRRRRNRRRRRRRRRRRRRRRKNTRR
20 20 A E H <4 S+ 0 0 115 44 17 EEEDTSEEEEEETEEEEEEEEEEEEEEEEEEEEEEEEEDEEED
21 21 A A H X S+ 0 0 14 44 28 ATTAAATATAAAAAAAAAAAAATAAAAAAAAAAAAAAAGTAAA
22 22 A S H X S+ 0 0 26 44 40 VMMIIIMIMIIIIIIIVVIIIIMIIIIIIIIIIIVVVVIMSII
23 23 A E H 4 S+ 0 0 194 44 49 gnnaaantntaaaaaaaaaaaanaaaaaaaaaaaaaaaanEae
24 24 A R H 4 S+ 0 0 187 44 65 srresdssrsssdsssttstssssssssssssttttttksKks
25 25 A V H < S- 0 0 42 44 62 CLLRVKLVLVIIKIIIVVIVTILIIIIIIIIISSVVVVALVQI
26 26 A G < + 0 0 60 44 82 GGGGGGGSGSHHGHHHNNHQQHGHHHHHHHHHKKNNNNGGSSR
27 27 A D > - 0 0 58 44 5 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDHDD
28 28 A P H > S+ 0 0 105 44 67 ynnyyrnynyyyryyyyyyfyynyyyyyyyyyyyyyyyynpyy
29 29 A V H > S+ 0 0 33 44 32 lmmlllmlmliiliiilliilimiiiiiiiiilmllllllmll
30 30 A L H > S+ 0 0 5 44 34 LIILLLVLILMMLMMMLLMFFMVMMMMMMMMMLLLLLLFVFFF
31 31 A A H X S+ 0 0 45 44 83 AAAEEAAEAEIIAIIIVVIEEIAIIIIIIIIIEEVVVVKALEN
32 32 A K H X S+ 0 0 101 44 63 AEEDEKADEDKKKKKKDDKHDKEKKKKKKKKKDDDDDDEETEK
33 33 A I H X S+ 0 0 5 44 0 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
34 34 A L H < S+ 0 0 45 44 8 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLALL
35 35 A E H >X S+ 0 0 110 44 30 AKKEEEEEKEEEEEEEEEEDEEKEEEEEEEEEEEEEEEEKEDE
36 36 A D H >X S+ 0 0 36 44 52 SDDSSSDSDSDDSDDDSSDSSDDDDDDDDDDDSSSSSSDDDSN
37 37 A E H 3< S+ 0 0 1 44 4 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEETEEEE
38 38 A E H X> S+ 0 0 108 44 6 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEE
39 39 A K H S+ 0 0 25 44 15 IVVVIIVVVVIIIIIIIIIILIVIIIIIIIIIVVIIIIIVIIV
42 42 A E H X S+ 0 0 122 44 11 GDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDKDD
43 43 A W H X S+ 0 0 50 44 9 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWMWW
44 44 A L H 4 S+ 0 0 6 44 6 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLILI
45 45 A E H >< S+ 0 0 120 44 0 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
46 46 A T H >< S+ 0 0 91 44 11 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTSETT
47 47 A I T 3< S+ 0 0 54 25 59 QQ Q EE EQQEQEEEEEEEEEQQ QV Q
48 48 A N T < 0 0 81 21 50 LI I LL LL L LLLLLLLLLLL Q
49 49 A G < 0 0 130 21 49 GG G DD DE D DDDDDDDDDGG S
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0.000 0 1.00
2 2 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 95 0 2 42 0 0 0.224 7 0.91
3 3 A 2 0 14 74 0 0 2 0 0 0 2 0 0 0 0 0 5 0 0 0 42 0 0 0.914 30 0.51
4 4 A 0 83 2 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42 0 0 0.519 17 0.91
5 5 A 0 0 0 0 10 0 0 0 5 0 0 0 0 0 60 5 2 19 0 0 42 0 0 1.228 40 0.19
6 6 A 0 5 2 0 0 0 0 2 2 0 45 0 31 0 0 10 0 2 0 0 42 0 0 1.447 48 0.24
7 7 A 0 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 95 42 0 0 0.224 7 0.84
8 8 A 0 84 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 44 0 0 0.438 14 0.68
9 9 A 0 0 0 0 0 0 0 0 14 0 0 14 0 0 0 30 2 16 23 2 44 0 0 1.705 56 0.28
10 10 A 0 84 0 2 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 44 0 0 0.503 16 0.51
11 11 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 44 0 0 0.000 0 1.00
12 12 A 5 14 2 41 0 0 5 0 0 0 0 2 0 2 14 2 14 0 0 0 44 0 0 1.806 60 0.22
13 13 A 0 2 0 0 0 0 0 2 2 0 0 0 0 2 0 0 23 59 2 7 44 0 0 1.261 42 0.55
14 14 A 0 0 2 0 0 0 0 36 61 0 0 0 0 0 0 0 0 0 0 0 44 0 0 0.754 25 0.66
15 15 A 39 14 5 2 0 0 0 0 36 0 0 0 0 2 0 0 2 0 0 0 44 0 0 1.405 46 0.32
16 16 A 0 0 0 0 0 0 0 0 14 25 0 0 0 0 0 61 0 0 0 0 44 0 0 0.918 30 0.42
17 17 A 16 23 0 0 2 0 0 14 0 0 0 2 0 0 5 0 0 0 0 39 44 0 0 1.581 52 0.06
18 18 A 2 77 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 44 0 0 0.610 20 0.59
19 19 A 0 0 0 0 0 0 0 0 0 0 0 2 0 0 75 5 0 0 18 0 44 0 0 0.752 25 0.50
20 20 A 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 86 0 7 44 0 0 0.536 17 0.82
21 21 A 0 0 0 0 0 0 0 2 84 0 0 14 0 0 0 0 0 0 0 0 44 0 0 0.503 16 0.71
22 22 A 16 0 66 14 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 44 0 0 0.979 32 0.59
23 23 A 0 0 0 0 0 0 0 2 73 0 0 5 0 0 0 0 0 7 14 0 44 0 42 0.913 30 0.50
24 24 A 0 0 0 0 0 0 0 0 0 0 57 20 0 0 9 7 0 2 0 5 44 0 0 1.273 42 0.35
25 25 A 27 14 39 0 0 0 0 0 2 0 5 2 2 0 2 5 2 0 0 0 44 0 0 1.704 56 0.37
26 26 A 0 0 0 0 0 0 0 30 0 0 9 0 0 36 2 5 5 0 14 0 44 0 0 1.585 52 0.18
27 27 A 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 98 44 0 0 0.108 3 0.94
28 28 A 0 0 0 0 2 0 75 0 0 5 0 0 0 0 5 0 0 0 14 0 44 0 43 0.854 28 0.32
29 29 A 2 43 39 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44 0 0 1.109 37 0.67
30 30 A 7 36 7 36 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44 0 0 1.374 45 0.66
31 31 A 14 2 36 0 0 0 0 0 23 0 0 0 0 0 0 2 0 20 2 0 44 0 0 1.559 52 0.16
32 32 A 0 0 0 0 0 0 0 0 5 0 0 2 0 2 0 45 0 18 0 27 44 0 0 1.335 44 0.37
33 33 A 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44 0 0 0.000 0 1.00
34 34 A 0 98 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 44 0 0 0.108 3 0.91
35 35 A 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 11 0 82 0 5 44 0 0 0.638 21 0.69
36 36 A 0 0 0 0 0 0 0 0 0 0 41 0 0 0 0 0 0 0 2 57 44 0 0 0.773 25 0.48
37 37 A 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 98 0 0 44 0 0 0.108 3 0.95
38 38 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 98 0 0 44 0 0 0.108 3 0.93
39 39 A 0 0 0 0 0 0 0 0 14 0 0 0 0 36 0 2 0 43 2 2 44 0 0 1.260 42 0.32
40 40 A 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 44 0 0 0.000 0 1.00
41 41 A 27 2 70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44 0 0 0.687 22 0.85
42 42 A 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 2 0 2 0 93 44 0 0 0.324 10 0.89
43 43 A 0 0 0 2 0 98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44 0 0 0.108 3 0.90
44 44 A 0 95 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44 0 0 0.185 6 0.94
45 45 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 44 0 0 0.000 0 1.00
46 46 A 0 0 0 0 0 0 0 0 0 0 2 95 0 0 0 0 0 2 0 0 44 0 0 0.216 7 0.88
47 47 A 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 40 52 0 0 25 0 0 0.964 32 0.40
48 48 A 0 81 10 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 5 0 21 0 0 0.685 22 0.49
49 49 A 0 0 0 0 0 0 0 29 0 0 5 0 0 0 0 0 0 5 0 62 21 0 0 0.945 31 0.50
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
1 23 107 3 gYCEs
1 28 115 4 yVTRDl
2 17 82 3 nLAQr
2 22 90 4 nGTREm
3 17 82 3 nLAQr
3 22 90 4 nGTREm
4 23 107 3 aFCEe
4 28 115 4 yVSREl
5 23 107 3 aYCEs
5 28 115 4 yGSREl
6 23 107 3 aLCRd
6 28 115 4 rTSEDl
7 23 107 3 nLAQs
7 28 115 4 nGTRDm
8 23 107 3 tHCEs
8 28 115 4 yVTRDl
9 23 107 3 nLAQr
9 28 115 4 nGTREm
10 23 107 3 tHCEs
10 28 115 4 yVTRDl
11 23 107 3 aYADs
11 28 115 4 yVSRDi
12 23 70 3 aYADs
12 28 78 4 yVSRDi
13 23 107 3 aLCRd
13 28 115 4 rTSEEl
14 23 114 3 aYADs
14 28 122 4 yVSRDi
15 23 107 3 aYADs
15 28 115 4 yVSRDi
16 23 114 3 aYADs
16 28 122 4 yVSRDi
17 23 107 3 aYAEt
17 28 115 4 yVSRQl
18 23 107 3 aYAEt
18 28 115 4 yVSRQl
19 23 107 3 aYADs
19 28 115 4 yVSRDi
20 23 128 3 aYCEt
20 28 136 4 fVSREi
21 23 107 3 aYCEs
21 28 115 4 yVSRDl
22 23 107 3 aYADs
22 28 115 4 yVSRDi
23 23 107 3 nLAQs
23 28 115 4 nGTRDm
24 23 107 3 aYADs
24 28 115 4 yVSRDi
25 23 107 3 aYADs
25 28 115 4 yVSRDi
26 23 107 3 aYADs
26 28 115 4 yVSRDi
27 23 107 3 aYADs
27 28 115 4 yVSRDi
28 23 107 3 aYADs
28 28 115 4 yVSRDi
29 23 107 3 aYADs
29 28 115 4 yVSRDi
30 23 107 3 aYADs
30 28 115 4 yVSRDi
31 23 107 3 aYADs
31 28 115 4 yVSRDi
32 23 107 3 aYADs
32 28 115 4 yVSRDi
33 23 107 3 aYCEt
33 28 115 4 yVSRDl
34 23 107 3 aYCEt
34 28 115 4 yVSRDm
35 23 107 3 aYAEt
35 28 115 4 yVSRQl
36 23 107 3 aYAEt
36 28 115 4 yVSRQl
37 23 107 3 aYAEt
37 28 115 4 yVSRQl
38 23 107 3 aYAEt
38 28 115 4 yVSRQl
39 23 107 3 aACEk
39 28 115 4 yVSREl
40 23 107 3 nLAQs
40 28 115 4 nGTRDl
41 29 29 4 pVGKKm
42 23 107 3 aYCEk
42 28 115 4 yVSREl
43 23 107 3 eYSDs
43 28 115 4 yVSRDl
//