Complet list of 1u6f hssp file
Complete list of 1u6f.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1U6F
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-10
HEADER RNA BINDING PROTEIN 29-JUL-04 1U6F
COMPND MOL_ID: 1; MOLECULE: RNA-BINDING PROTEIN UBP1; CHAIN: A; FRAGMENT: RES
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: TRYPANOSOMA CRUZI; ORGANISM_TAXID: 569
AUTHOR L.VOLPON,I.D'ORSO,A.FRASCH,K.GEHRING
DBREF 1U6F A 1 139 UNP Q967R0 Q967R0_TRYCR 1 139
SEQLENGTH 139
NCHAIN 1 chain(s) in 1U6F data set
NALIGN 92
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : Q967R0_TRYCR1U6F 1.00 1.00 1 139 1 139 139 0 0 224 Q967R0 RNA-binding protein UBP-1 OS=Trypanosoma cruzi PE=1 SV=1
2 : K2NSZ1_TRYCR 0.99 1.00 1 139 1 139 139 0 0 224 K2NSZ1 RNA-binding protein 6, putative OS=Trypanosoma cruzi marinkellei GN=MOQ_004095 PE=4 SV=1
3 : Q4E1N5_TRYCC 0.99 1.00 1 139 1 139 139 0 0 224 Q4E1N5 RNA-binding protein, putative OS=Trypanosoma cruzi (strain CL Brener) GN=Tc00.1047053507093.220 PE=4 SV=1
4 : V5BSU3_TRYCR 0.99 1.00 1 139 1 139 139 0 0 224 V5BSU3 RNA-binding protein OS=Trypanosoma cruzi Dm28c GN=TCDM_02013 PE=4 SV=1
5 : Q8MV46_TRYCR 0.80 0.87 16 138 2 126 125 1 2 166 Q8MV46 U-rich RNA-binding protein UBP-2 OS=Trypanosoma cruzi PE=2 SV=1
6 : V5BNA6_TRYCR 0.80 0.87 16 138 2 126 125 1 2 166 V5BNA6 U-rich RNA-binding protein UBP-2 OS=Trypanosoma cruzi Dm28c GN=TCDM_14059 PE=4 SV=1
7 : Q7Z1G9_TRYCR 0.79 0.87 16 138 2 126 125 1 2 166 Q7Z1G9 RNA-binding protein UBP-2 OS=Trypanosoma cruzi PE=4 SV=1
8 : A4HDZ1_LEIBR 0.76 0.84 24 131 9 117 109 1 1 168 A4HDZ1 RNA-binding protein, putative, UPB2 OS=Leishmania braziliensis GN=LBRM_25_0440 PE=4 SV=1
9 : Q4QA46_LEIMA 0.75 0.84 20 130 16 127 112 1 1 177 Q4QA46 Putative RNA-binding protein, UPB1 OS=Leishmania major GN=LMJF_25_0490 PE=4 SV=1
10 : D0A5I2_TRYB9 0.72 0.79 13 138 8 134 127 1 1 175 D0A5I2 RNA-binding protein, putative OS=Trypanosoma brucei gambiense (strain MHOM/CI/86/DAL972) GN=TbgDal_XI480 PE=4 SV=1
11 : Q387K0_TRYB2 0.72 0.79 13 138 8 134 127 1 1 175 Q387K0 RNA-binding protein, putative OS=Trypanosoma brucei brucei (strain 927/4 GUTat10.1) GN=Tb11.03.0580 PE=4 SV=1
12 : Q4QA45_LEIMA 0.72 0.83 16 130 2 117 116 1 1 167 Q4QA45 Putative RNA-binding protein, UPB2 OS=Leishmania major GN=LMJF_25_0500 PE=4 SV=1
13 : A4HDZ2_LEIBR 0.71 0.81 16 131 2 118 117 1 1 169 A4HDZ2 RNA-binding protein, putative, UPB1 OS=Leishmania braziliensis GN=LBRM_25_0450 PE=4 SV=1
14 : A4I191_LEIIN 0.71 0.81 16 130 2 117 116 1 1 167 A4I191 RNA-binding protein, putative, UPB2 OS=Leishmania infantum GN=LINJ_25_0510 PE=4 SV=1
15 : E9BHF5_LEIDB 0.71 0.81 16 130 2 117 116 1 1 167 E9BHF5 RNA-binding protein, putative, UPB2 OS=Leishmania donovani (strain BPK282A1) GN=LDBPK_250510 PE=4 SV=1
16 : G0UZ48_TRYCI 0.68 0.74 1 138 1 152 152 2 14 210 G0UZ48 Putative RNA-binding protein OS=Trypanosoma congolense (strain IL3000) GN=TCIL3000_11_470 PE=4 SV=1
17 : D0A5H9_TRYB9 0.66 0.71 1 138 1 156 156 2 18 218 D0A5H9 RNA-binding protein, putative OS=Trypanosoma brucei gambiense (strain MHOM/CI/86/DAL972) GN=TbgDal_XI450 PE=4 SV=1
18 : Q387K1_TRYB2 0.66 0.71 1 138 1 157 157 3 19 219 Q387K1 RNA-binding protein, putative OS=Trypanosoma brucei brucei (strain 927/4 GUTat10.1) GN=Tb11.03.0620 PE=4 SV=1
19 : S9VAM3_9TRYP 0.50 0.68 17 138 2 119 122 2 4 184 S9VAM3 RNA-binding protein, , UPB1 OS=Angomonas deanei GN=AGDE_12541 PE=4 SV=1
20 : E9AXC9_LEIMU 0.35 0.57 12 133 2 130 133 3 15 240 E9AXC9 Putative RNA-binding protein OS=Leishmania mexicana (strain MHOM/GT/2001/U1103) GN=LMXM_25_0520 PE=4 SV=1
21 : V9I7L1_APICE 0.35 0.58 15 139 4 121 125 2 7 229 V9I7L1 Protein sex-lethal OS=Apis cerana GN=ACCB00126.3 PE=2 SV=1
22 : V9I8Y5_APICE 0.35 0.58 15 139 4 121 125 2 7 302 V9I8Y5 Sex-lethal OS=Apis cerana GN=ACCB00126.2 PE=2 SV=1
23 : V9I9F3_APICE 0.35 0.58 15 139 4 121 125 2 7 297 V9I9F3 Sex-lethal OS=Apis cerana GN=ACCB00126.1 PE=2 SV=1
24 : V9I9W8_APICE 0.35 0.58 15 139 4 121 125 2 7 219 V9I9W8 Sex-lethal OS=Apis cerana GN=ACCB00126.4 PE=2 SV=1
25 : H9GNS6_ANOCA 0.33 0.48 13 138 236 366 142 3 27 366 H9GNS6 Uncharacterized protein (Fragment) OS=Anolis carolinensis GN=CELF5 PE=4 SV=1
26 : Q16ZL1_AEDAE 0.33 0.58 18 139 11 131 129 3 15 363 Q16ZL1 AAEL008164-PA OS=Aedes aegypti GN=AAEL008164 PE=4 SV=1
27 : Q54D57_DICDI 0.33 0.48 37 139 76 201 132 2 35 550 Q54D57 Putative uncharacterized protein OS=Dictyostelium discoideum GN=DDB_0184418 PE=4 SV=1
28 : T1DJT4_9DIPT 0.33 0.57 18 139 11 131 129 3 15 243 T1DJT4 Putative rna-binding protein elav/hu rrm superfamily (Fragment) OS=Psorophora albipes PE=2 SV=1
29 : H2MDZ1_ORYLA 0.32 0.46 5 138 226 355 142 3 20 355 H2MDZ1 Uncharacterized protein (Fragment) OS=Oryzias latipes GN=LOC101171151 PE=4 SV=1
30 : I3J3L3_ORENI 0.32 0.46 5 138 363 492 142 3 20 492 I3J3L3 Uncharacterized protein OS=Oreochromis niloticus GN=LOC100710449 PE=4 SV=1
31 : I3J3L4_ORENI 0.32 0.46 5 138 261 392 142 2 18 392 I3J3L4 Uncharacterized protein (Fragment) OS=Oreochromis niloticus GN=LOC100710449 PE=4 SV=1
32 : K7EJD7_HUMAN 0.32 0.49 5 114 64 181 120 2 12 181 K7EJD7 CUGBP Elav-like family member 4 (Fragment) OS=Homo sapiens GN=CELF4 PE=2 SV=2
33 : W8B190_CERCA 0.32 0.54 17 139 65 194 136 2 19 425 W8B190 Protein elav OS=Ceratitis capitata GN=ELAV PE=2 SV=1
34 : A3F289_9MUSC 0.31 0.50 17 139 74 202 136 3 20 401 A3F289 Elav (Fragment) OS=Drosophila recens GN=elav PE=4 SV=1
35 : A3F290_9MUSC 0.31 0.50 15 139 60 190 138 3 20 389 A3F290 Elav (Fragment) OS=Drosophila recens GN=elav PE=4 SV=1
36 : A3F291_9MUSC 0.31 0.50 16 139 72 201 137 3 20 400 A3F291 Elav (Fragment) OS=Drosophila recens GN=elav PE=4 SV=1
37 : A3F293_9MUSC 0.31 0.50 17 139 70 198 136 3 20 397 A3F293 Elav (Fragment) OS=Drosophila recens GN=elav PE=4 SV=1
38 : A3F294_9MUSC 0.31 0.50 15 139 74 204 138 3 20 403 A3F294 Elav (Fragment) OS=Drosophila recens GN=elav PE=4 SV=1
39 : A3F296_9MUSC 0.31 0.50 17 139 73 201 136 3 20 400 A3F296 Elav (Fragment) OS=Drosophila recens GN=elav PE=4 SV=1
40 : A3F297_9MUSC 0.31 0.50 17 139 73 201 136 3 20 400 A3F297 Elav (Fragment) OS=Drosophila recens GN=elav PE=4 SV=1
41 : A3F299_9MUSC 0.31 0.50 17 139 72 200 136 3 20 399 A3F299 Elav (Fragment) OS=Drosophila recens GN=elav PE=4 SV=1
42 : A3F2A0_9MUSC 0.31 0.50 16 139 74 203 137 3 20 402 A3F2A0 Elav (Fragment) OS=Drosophila recens GN=elav PE=4 SV=1
43 : A3F2A5_9MUSC 0.31 0.50 15 139 72 202 138 3 20 401 A3F2A5 Elav (Fragment) OS=Drosophila recens GN=elav PE=4 SV=1
44 : A3F2A7_9MUSC 0.31 0.50 15 139 75 205 138 3 20 404 A3F2A7 Elav (Fragment) OS=Drosophila recens GN=elav PE=4 SV=1
45 : A3F2A8_9MUSC 0.31 0.50 17 139 74 202 136 3 20 401 A3F2A8 Elav (Fragment) OS=Drosophila recens GN=elav PE=4 SV=1
46 : A3F2A9_9MUSC 0.31 0.50 15 139 73 203 138 3 20 402 A3F2A9 Elav (Fragment) OS=Drosophila recens GN=elav PE=4 SV=1
47 : A3F2B3_9MUSC 0.31 0.50 15 139 74 204 138 3 20 403 A3F2B3 Elav (Fragment) OS=Drosophila recens GN=elav PE=4 SV=1
48 : A3F2B4_9MUSC 0.31 0.50 15 139 74 204 138 3 20 403 A3F2B4 Elav (Fragment) OS=Drosophila recens GN=elav PE=4 SV=1
49 : A5A2G4_CHICK 0.31 0.46 5 138 317 445 141 3 19 445 A5A2G4 CUG-BP and ETR-3-like factor 6 (Fragment) OS=Gallus gallus PE=2 SV=1
50 : B4JK70_DROGR 0.31 0.53 18 139 152 280 135 2 19 511 B4JK70 GH12602 OS=Drosophila grimshawi GN=Dgri\GH12602 PE=4 SV=1
51 : B4L2T2_DROMO 0.31 0.52 19 139 117 244 134 2 19 475 B4L2T2 GI15436 OS=Drosophila mojavensis GN=Dmoj\GI15436 PE=4 SV=1
52 : B4MER1_DROVI 0.31 0.53 18 139 157 285 135 2 19 516 B4MER1 Embryonic lethal, abnormal vision OS=Drosophila virilis GN=elav PE=4 SV=1
53 : CELF6_MOUSE 0.31 0.47 12 138 341 460 132 3 17 460 Q7TN33 CUGBP Elav-like family member 6 OS=Mus musculus GN=Celf6 PE=2 SV=1
54 : D1LWX5_SACKO 0.31 0.46 5 138 355 485 142 3 19 485 D1LWX5 Bruno-like protein OS=Saccoglossus kowalevskii PE=2 SV=1
55 : D3YX51_MOUSE 0.31 0.47 12 138 226 344 131 3 16 344 D3YX51 CUGBP Elav-like family member 6 OS=Mus musculus GN=Celf6 PE=4 SV=1
56 : D4ABS9_RAT 0.31 0.48 12 138 341 459 131 3 16 459 D4ABS9 Bruno-like 6, RNA binding protein (Drosophila) (Predicted) OS=Rattus norvegicus GN=Celf6 PE=4 SV=2
57 : F1NXF6_CHICK 0.31 0.46 5 138 358 487 142 3 20 487 F1NXF6 Uncharacterized protein OS=Gallus gallus GN=BRUNOL6 PE=4 SV=2
58 : F7AV17_CALJA 0.31 0.48 12 138 225 344 132 3 17 344 F7AV17 Uncharacterized protein OS=Callithrix jacchus GN=CELF6 PE=4 SV=1
59 : G5BZ33_HETGA 0.31 0.48 5 138 540 681 144 2 12 702 G5BZ33 CUG-BP-and ETR-3-like factor 4 OS=Heterocephalus glaber GN=GW7_05381 PE=4 SV=1
60 : H0VVV3_CAVPO 0.31 0.48 12 138 254 373 132 3 17 373 H0VVV3 Uncharacterized protein (Fragment) OS=Cavia porcellus GN=Celf6 PE=4 SV=1
61 : Q55D63_DICDI 0.31 0.52 1 123 239 367 132 2 12 368 Q55D63 RNA-binding region RNP-1 domain-containing protein OS=Dictyostelium discoideum GN=DDB_G0270634 PE=4 SV=1
62 : Q5I4W5_DROAE 0.31 0.52 20 139 87 213 133 2 19 337 Q5I4W5 Embryonic lethal abnormal vision protein (Fragment) OS=Drosophila americana GN=elav PE=4 SV=1
63 : R7TIA4_CAPTE 0.31 0.47 5 138 328 462 145 3 21 462 R7TIA4 Uncharacterized protein OS=Capitella teleta GN=CAPTEDRAFT_183838 PE=4 SV=1
64 : R7VPK1_COLLI 0.31 0.46 5 138 320 449 142 3 20 449 R7VPK1 CUG-BP-and ETR-3-like factor 3 (Fragment) OS=Columba livia GN=A306_12206 PE=4 SV=1
65 : U3J9V4_ANAPL 0.31 0.46 5 138 268 397 142 3 20 397 U3J9V4 Uncharacterized protein (Fragment) OS=Anas platyrhynchos PE=4 SV=1
66 : U3K4Q6_FICAL 0.31 0.46 5 138 352 481 142 3 20 481 U3K4Q6 Uncharacterized protein (Fragment) OS=Ficedula albicollis PE=4 SV=1
67 : W4WS99_ATTCE 0.31 0.53 1 139 39 186 154 2 21 282 W4WS99 Uncharacterized protein OS=Atta cephalotes PE=4 SV=1
68 : W5NDC6_LEPOC 0.31 0.45 5 138 250 380 143 3 21 380 W5NDC6 Uncharacterized protein OS=Lepisosteus oculatus PE=4 SV=1
69 : A5A2G2_CHICK 0.30 0.45 5 138 241 371 143 3 21 371 A5A2G2 CUG-BP and ETR-3-like factor 4 isoform 2 (Fragment) OS=Gallus gallus PE=2 SV=1
70 : A9PG08_POPTR 0.30 0.52 1 127 55 184 130 2 3 276 A9PG08 Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s35830g PE=2 SV=1
71 : A9UXQ5_MONBE 0.30 0.54 1 128 252 381 130 2 2 389 A9UXQ5 Predicted protein OS=Monosiga brevicollis GN=16599 PE=4 SV=1
72 : B3MYX8_DROAN 0.30 0.51 18 139 131 259 135 2 19 490 B3MYX8 GF22224 OS=Drosophila ananassae GN=Dana\GF22224 PE=4 SV=1
73 : B4N2I1_DROWI 0.30 0.50 20 139 153 278 133 3 20 509 B4N2I1 GK16120 OS=Drosophila willistoni GN=Dwil\GK16120 PE=4 SV=1
74 : ELAV_DROME 0.30 0.50 15 139 121 252 138 2 19 483 P16914 Protein elav OS=Drosophila melanogaster GN=elav PE=2 SV=1
75 : F1NYP4_CHICK 0.30 0.45 5 138 217 347 143 3 21 347 F1NYP4 Uncharacterized protein OS=Gallus gallus GN=CELF4 PE=4 SV=2
76 : F7DKA5_XENTR 0.30 0.45 5 138 244 374 143 3 21 374 F7DKA5 CUGBP Elav-like family member 4 (Fragment) OS=Xenopus tropicalis GN=celf4 PE=4 SV=1
77 : G3TPY8_LOXAF 0.30 0.45 5 138 374 504 143 3 21 504 G3TPY8 Uncharacterized protein OS=Loxodonta africana GN=CELF4 PE=4 SV=1
78 : H0X1R3_OTOGA 0.30 0.46 5 138 295 424 142 3 20 424 H0X1R3 Uncharacterized protein OS=Otolemur garnettii GN=CELF4 PE=4 SV=1
79 : H0YTT4_TAEGU 0.30 0.46 5 138 232 361 142 3 20 361 H0YTT4 Uncharacterized protein (Fragment) OS=Taeniopygia guttata GN=BRUNOL4 PE=4 SV=1
80 : H2URM2_TAKRU 0.30 0.46 5 138 396 524 141 3 19 524 H2URM2 Uncharacterized protein OS=Takifugu rubripes GN=LOC101062199 PE=4 SV=1
81 : H9GIW8_ANOCA 0.30 0.45 5 138 120 250 143 3 21 250 H9GIW8 Uncharacterized protein OS=Anolis carolinensis GN=LOC100563749 PE=4 SV=2
82 : K7FVY3_PELSI 0.30 0.46 5 138 234 362 141 3 19 362 K7FVY3 Uncharacterized protein OS=Pelodiscus sinensis PE=4 SV=1
83 : K7GB34_PELSI 0.30 0.46 5 138 232 361 142 3 20 361 K7GB34 Uncharacterized protein (Fragment) OS=Pelodiscus sinensis PE=4 SV=1
84 : L5MGR2_MYODS 0.30 0.49 1 138 298 426 140 3 13 426 L5MGR2 CUGBP Elav-like family member 5 OS=Myotis davidii GN=MDA_GLEAN10011142 PE=4 SV=1
85 : M4AUS7_XIPMA 0.30 0.46 5 138 278 406 141 3 19 406 M4AUS7 Uncharacterized protein OS=Xiphophorus maculatus PE=4 SV=1
86 : M9NFP7_DROME 0.30 0.50 15 139 121 252 138 2 19 483 M9NFP7 Embryonic lethal abnormal vision, isoform D OS=Drosophila melanogaster GN=elav PE=4 SV=1
87 : R0LMG3_ANAPL 0.30 0.46 5 138 249 378 142 3 20 378 R0LMG3 CUG-BP-and ETR-3-like factor 4 (Fragment) OS=Anas platyrhynchos GN=Anapl_17719 PE=4 SV=1
88 : U3K3H9_FICAL 0.30 0.46 5 138 232 361 142 3 20 361 U3K3H9 Uncharacterized protein (Fragment) OS=Ficedula albicollis PE=4 SV=1
89 : V4AID2_LOTGI 0.30 0.46 6 138 349 477 142 3 22 477 V4AID2 Uncharacterized protein OS=Lottia gigantea GN=LOTGIDRAFT_119400 PE=4 SV=1
90 : W5KKQ7_ASTMX 0.30 0.45 5 138 276 406 142 3 19 406 W5KKQ7 Uncharacterized protein OS=Astyanax mexicanus PE=4 SV=1
91 : W5MBJ5_LEPOC 0.30 0.46 5 138 282 411 142 3 20 411 W5MBJ5 Uncharacterized protein (Fragment) OS=Lepisosteus oculatus PE=4 SV=1
92 : W5P5G1_SHEEP 0.30 0.48 5 138 183 313 143 3 21 313 W5P5G1 Uncharacterized protein (Fragment) OS=Ovis aries GN=CELF4 PE=4 SV=1
## ALIGNMENTS 1 - 70
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A M 0 0 230 13 29 MMMM MMM M L F
2 2 A S - 0 0 103 13 55 SSSS SSS S N N
3 3 A Q - 0 0 123 13 53 QQQQ QQQ Q Q T
4 4 A I - 0 0 110 13 46 IIII VVV A I I
5 5 A P - 0 0 70 42 22 PPPP PPP PPPP P P P P M PPPPVPPP
6 6 A L S S+ 0 0 151 43 19 LLLL LLL LLLL L L L L G LLLLALLL
7 7 A V S S+ 0 0 127 43 88 VVVV PAA QQQQ Q Q Q Q N TQQQSQQV
8 8 A S - 0 0 69 43 83 SSSS SSS QQQQ Q Q Q Q N QQQQNQQA
9 9 A Q S S- 0 0 163 43 65 QQQQ QPP AAAA A A A A G AAAAQAAQ
10 10 A Y + 0 0 123 43 37 YYYY CCC YYYY Y Y Y Y Y YYYYIYYT
11 11 A D + 0 0 134 43 72 DDDD DDD AAAA A T A A R SAAASAAS
12 12 A P S S- 0 0 95 49 59 PPPP PPP S GGGG G PGPPGPGPG GGGGSGGD
13 13 A Y + 0 0 197 52 78 YYYY YY YYY F Y VVVV M YMYYMYVYY VMMMSVVW
14 14 A G + 0 0 68 52 71 GGGG TT nnn a a qqqq q pqppqpqpq qqqqgqqA
15 15 A Q + 0 0 179 65 68 QQQQ TT qqq qQQQQq aaaa Q Q QQ QQQa aaaaaaaam aaaaqaaQ
16 16 A T S S+ 0 0 138 74 110 TTTTSSS QQAAAAQQQ QRRRRP YYYY QQ Q QQQ QQQY YYYYYYYYQ YYYYQYYQ
17 17 A A + 0 0 89 82 67 AAAAQQQ QQQQQQTQQQSEEEEL AAAGQQQQQQQQQQQQQQQQA AGAAAAGAG GAAAQAGD
18 18 A Q - 0 0 77 87 39 QQQQQQQ QQHHHHQQQQKQQQQPD DPPPQQQQQQQQQQQQQQQQQPQ QPQPPPPQPN QPPPQPQE
19 19 A L + 0 0 168 88 65 LLLLMMM PPMMMMPQQMPQQQQIL LIIIILLLLLLLLLLLLLLLLIVVVALAVIMIVQ FIIIQIIE
20 20 A Q S S- 0 0 168 91 77 QQQQQQQ QPPAAAATQQQEPPPPIQ QSSSSQQQQQQQQQQQQQQQQSQQQSTSSSSSSAQQSSSQSSD
21 21 A Q S S- 0 0 157 91 68 QQQQYYY PQQPPPPQQQQPQQQQQK KQQQQQSSSSSSSSSSSSSSSQQQQTQTTQTQTFQQQQQQQQT
22 22 A L + 0 0 101 91 80 LLLLYYY QQQQPQQQQQDIPPPPQQ QAAAAQNNNNNNNNNNNNNNNAAAAAAAAAAATDAAAAAPAAV
23 23 A Q S S- 0 0 95 91 110 QQQQAAA QQQQPQQQQQPAQQQQQN NFFFFNTTTTTTTTTTTTTTTFNNNFFFFFFFFYNLFFFQFFT
24 24 A Q S S- 0 0 146 92 80 QQQQPPPQQQQQQQQQQQQTQQQQQG GPPPPGNNNNNNNNNNNNNNNPTTTSTSPPPPPNTAPPPSPPL
25 25 A Q S S- 0 0 147 92 58 QQQQQQRQPQQPQPPQQQQPQQQQQE EQQQQNGGGGGGGGGGGGGGGQNNNQQQQQQQQQNQQQQQQQG
26 26 A Q > - 0 0 114 92 69 QQQQQQQQPQQPQPPQAQQVQQQQQS SQQQPGNNNNNNNNNNNNNNNQGGGQQQQQQPQQGHQQQFQPE
27 27 A Q T 3 S- 0 0 88 92 73 QQQQQQQQQAAQQQQPPAYSQQQQQQ QPPPPNSSSSSSSSSSSSSSSANNNPSPPAPPSQNAAAAQPPE
28 28 A Q T 3 S- 0 0 81 92 76 QQQQLLLMQPPQMQQAPPNGAAAAQN NTTTPAGGGGGGGGGGGGGGGPTSSSNSSPSPSQSAPPPQAPS
29 29 A H < - 0 0 160 92 97 HHHHQQQPQPPQPPPPPPPEQQQQQT TIIIMNGGGGGGGGGGGGGGGIGGGAVAAIAMTQGTIILQIMF
30 30 A I + 0 0 122 92 90 IIIIQQQSPPPPSPPQQPQGQQQQPA AIIIIGAAAAAAAAAAAAAAAIGGGLTLLILILQGIIIIQIIG
31 31 A P - 0 0 56 92 63 PPPPAAAQPSSPQQQPPQQSQQQQQA APPPPQQQQQQQQQQQQQQQQPAAAPMPPPPPPQAIPPPQPPD
32 32 A P S S- 0 0 96 92 58 PPPPPPPQQMMQQQQLLpQtQQQQQA AQQQQQNNNNNNNNNNNNNNNQQQQQPQQQQQQQQpQQQQQQg
33 33 A T S S+ 0 0 127 33 73 TAAAAAAQQGGQQQQGGg.g...... ...Q.N................NNN.........Nt...Q..e
34 34 A Q + 0 0 143 58 74 QQQQQQQVVAAVVMMTQQQGQQQQQ. ...Q.GGGGGGGGGGGGGGGG.GGG.T.......GT...Q..E
35 35 A M S S- 0 0 131 90 101 MMMMMMMYYMMYYYYLVVEYTTTTQA SQQRQNSSSSSSSSSSSSSSSQSSSQQQQQQQQ.SAQQQIQQT
36 36 A N S S+ 0 0 130 92 61 NNNNNNNNNNNNNNNNNNGAKKKKQS SQQEQNNNNNNNNNNNNNNNNQNNNQQQQQQQQQNQQQQKQQF
37 37 A P - 0 0 71 93 88 PPPPPPPPPQQPPPPQQQLFGGGGRGPGRRARGGGGGGGGGGGGGGGGRGGGRRRRRRRRQGKRRRGRRP
38 38 A E > - 0 0 89 93 56 EEEEEEEEEDDEEEEEEEEDNNNNESDSEEPESSSSSSSSSSSSSSSSESSSEEEEEEEEQSEEEENEEE
39 39 A P T 3 S+ 0 0 87 93 73 PPPPPPPPPLLPPPPPPPPPEEEEGELEGGGGSTTTTTTTTTTTTTTTGTTTGGGGGGGGPTGGGGEGGP
40 40 A D T > S+ 0 0 114 93 67 DDDDDDDEEDDEEEEDDDDDEEEEPTDNPPPPEEEEEEEEEEEEEEEEPEEEPPPPPPPPNEPPPPEPPP
41 41 A V T < + 0 0 46 93 85 VVVVLLLAALLAAAAFFFAAPPPPEAAAEEEETTTTTTTTTTTTTTTTETTTEEEEEEEEETEEEEPEEE
42 42 A L T 3 + 0 0 58 93 108 LLLLLLLLLLLLLLLLLLLLRRRRGRLRGGGGRRRRRRRRRRRRRRRRGRRRGGGGGGGGSRGGGGRGGE
43 43 A R S < S+ 0 0 57 93 88 RRRRRRRRRRRRRRRRRRRRTTTTCTTTCCCCTTTTTTTTTTTTTTTTCTTTCCCCCCCCNTCCCCTCCA
44 44 A N E -A 90 0A 38 93 3 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNDNNNNNNNNK
45 45 A L E -AB 89 118A 0 93 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
46 46 A M E -AB 88 117A 57 93 50 MMMMMMMMMMMMMMMMMMIIIIIIFIIIFFFFIIIIIIIIIIIIIIIIFIIIFFFFFFFFFIFFFFIFFY
47 47 A V E +AB 87 116A 0 93 17 VVVVVVVVVVVVVVVVVVVVIIIIIVVVIIIIVVVVVVVVVVVVVVVVIVVVIIIIIIIIIVIIIIIIIV
48 48 A N E + B 0 115A 45 93 72 NNNNNNNNNNNNNNNNNNNNNNNNYNNNYYYYNNNNNNNNNNNNNNNNYNNNYYYYYYYYYNYYYYNYYG
49 49 A Y S S+ 0 0 97 93 55 YYYYYYYYYYYYYYYYYYYYYYYYHYNYHHHHYYYYYYYYYYYYYYYYHYYYHHHHHHHHYYHHHHYHHN
50 50 A I - 0 0 41 93 20 IIIIIIIIIIIIIIIIIIILLLLLLLILLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
51 51 A P S > S+ 0 0 56 93 0 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
52 52 A T T 3 S+ 0 0 97 93 55 TTTTTTTTTTTTTTTTTTIPQQQQQQKQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQFQQQQQQQQY
53 53 A T T 3 S+ 0 0 73 93 65 TTTTTTTTTTTTTTTTTTDLSSSSETSTEEEETTTTTTTTTTTTTTTTETTTEEEEEEEETTEEEENEED
54 54 A V < - 0 0 5 93 59 VVVVVVVVVVVVVVVVVVLMMMMMFMMMFFFFMMMMMMMMMMMMMMMMFMMMFFFFFFFFYMFFFFMFFV
55 55 A D > - 0 0 74 93 62 DDDDDDDDDDDDDDDDDDDNTTTTGTDTGGGGTTTTTTTTTTTTTTTTGTTTGGGGGGGGGTGGGGNGGN
56 56 A E H > S+ 0 0 95 93 26 EEEEEEEEEEEEEEEEEEEEEEEEDESEDDDDEEEEEEEEEEEEEEEEDEEEDDDDDDDDDEDDDDEDDS
57 57 A V H > S+ 0 0 91 93 83 VVVVVVVMVVVVMVVVVVSAKKKKNENEAAAADDDDDDDDDDDDDDDDADDDAAAAAAAAEDAAAAKAAE
58 58 A Q H > S+ 0 0 106 93 29 QQQQQQQQQQQQQQQQQQNQDDDDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEN
59 59 A L H X>S+ 0 0 18 93 26 LLLLLLLLLLLLLLLLLLVVLLLLLILILLLLIIIIIIIIIIIIIIIILIIILLLLLLLLLILLLLLLLL
60 60 A R H X5S+ 0 0 115 93 81 RRRRRRRRRRRRRRRRRRSYYYYYMRKRMMMMRRRRRRRRRRRRRRRRTRRRIMIITIMIKRATTTYMMA
61 61 A Q H X5S+ 0 0 127 93 66 QQQQQQQQQQQQQQQQQQSESSSSQSSSQQQQSSSSSSSSSSSSSSSSQSSSQQQQQQQQQSQQQQSQQQ
62 62 A L H X5S+ 0 0 26 93 21 LLLLLLLLLLLLLLLLLLILLLLLMLLLMMMMLLLLLLLLLLLLLLLLMLLLTMTTMTMTLLMMMMLMML
63 63 A F H >X5S+ 0 0 1 93 0 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
64 64 A E H 3<> -C 82 0A 35 93 3 DDDDDDDDDDDDDDDDDDDDDDDDDDNDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDN
78 78 A R T 45S+ 0 0 200 93 41 RRRRRRRRRRRRRRRRRRRKYYYYRKRKRRRRKKKKKKKKKKKKKKKKRKKKRRRRRRRRKKRRRRYRRR
79 79 A E T 45S+ 0 0 158 93 76 EEEEEEEEEEEEEEEEEESIKKKKAnknAAAAssssssssssssssssAsssAAAAAAAANsAAAAKAAE
80 80 A T T 45S- 0 0 100 93 47 TTTTTTTTTTTTTTTTTTTTTTTTTknkTTTTkkkkkkkkkkkkkkkkTkkkTTTTTTTTTkTTTTTTTT
81 81 A R T <5 + 0 0 201 93 75 RRRRRRRRRRRRRRRRRRGGGGGGNGNGNNNNGGGGGGGGGGGGGGGGNGGGNNNNNNSNQGNNNNGNND
82 82 A Q E < - C 0 77A 129 93 23 QQQQQQQQQQQQQQQQQQQEYYYYQQSQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQYQQQ
83 83 A S E S+ 0 0A 68 93 0 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
84 84 A R E + 0 0A 99 93 90 RRRRRRRRRRRRRRRRRRRRYYYYKLLLKKKKLLLLLLLLLLLLLLLLKLLLKKKKKKKKKLKKKKYKKR
85 85 A G E S- 0 0A 24 93 57 GGGGGGGGGGGGGGGGGGGGGGGGCGGGCCCCGGGGGGGGGGGGGGGGCGGGCCCCCCCCCGCCCCGCCG
86 86 A Y E - C 0 75A 85 93 4 YYYYYYYYYYYYYYYYYYYYFFFFFYYYFFFFYYYYYYYYYYYYYYYYFYYYFFFFFFFFFYFFFFFFFF
87 87 A G E -AC 47 74A 0 93 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
88 88 A F E -AC 46 73A 40 93 0 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFLFFFFFFFFFFF
89 89 A V E -AC 45 72A 1 93 0 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
90 90 A K E -AC 44 71A 63 93 70 KKKKKKKKKKKKKKKKKKKKNNNNSNKNSSSSNNNNNNNNNNNNNNNNSNNNSSSSSSSSSNSSSSNSST
91 91 A F E - C 0 69A 0 93 6 FFFFFFFYYFFYYYYFFFYYYYYYFFFFFFFFYYYYYYYYYYYYYYYYFYYYFFFFFFFFYYFFFFYFFM
92 92 A Q S S+ 0 0 102 93 87 QQQQQQQCHQQHCHHQQQKQAAAADHSLDDDDVVVVVVVVVVVVVVVVDVVVDDDDDDDDDVDDDDADDS
93 93 A S S >> S- 0 0 71 93 80 SSSSSSSSSSSSSSSSSSQFKKKKNRKRNNNNRRRRRRRRRRRRRRRRNRRRNNNNNNTNNRNNNNKNNT
94 94 A G H >> S+ 0 0 16 93 48 GGGGGGGAAAAAAAAAAASFAAAAPSKSPPPPAPPPPPPPPPPPPPPPPPPPPPPPPPPPTPPPPPAPPV
95 95 A S H 3> S+ 0 0 100 93 78 SSSSSSSAASSAAAAASSAFEEEESQDQSSSAQQQQQQQQQQQQQQQQTQQQTATTTTATQQATTTESAD
96 96 A S H X> S+ 0 0 17 93 53 SSSSSSSSSSSSSSSSSSSSDDDDSDEDSSSSDDDDDDDDDDDDDDDDSDDDSSSSSSSSSDSSSSDSSE
97 97 A A H S+ 0 0 0 93 0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
101 101 A I H <5S+ 0 0 57 93 15 IIIIIIIVVIIVVVVIIIIVIIIIIVIVIIIIVVVVVVVVVVVVVVVVIVVVIIIIIIIIIVIIIIIIII
102 102 A A H <5S+ 0 0 83 93 70 AAAAAAANNAANNNNAAAQSSSSSQNENQQQQNNNNNNNNNNNNNNNNQNNNQQQQQQQQQNQQQQSQQE
103 103 A G H <5S+ 0 0 22 93 79 GGGGGGGEESSEEEESSSKCTTTTAVQVAAAAVVVVVVVVVVVVVVVVAVVVAAAAAAAAEVAAAATAAK
104 104 A L T ><5S+ 0 0 0 93 9 LLLLLLLLLLLLLLLLLLLLLLLLMLLLMMMMLLLLLLLLLLLLLLLLMLLLMMMMMMMMLLMMMMLMMF
105 105 A N T 3 - 0 0 114 92 69 GGNNPPPPPPPQPPPNPPNPPP
27 27 A Q T 3 S- 0 0 88 92 73 QSAAPPPPPPPAPPPAPPSPPP
28 28 A Q T 3 S- 0 0 81 92 76 PGGGPPPPPPPPPPPGPPSPPP
29 29 A H < - 0 0 160 92 97 MGGSMMMMMIMIMLISMMPILM
30 30 A I + 0 0 122 92 90 AAAGIIIIIIIMILIGIIIIII
31 31 A P - 0 0 56 92 63 PSQSPPPPPPPPPQPSPPGPPP
32 32 A P S S- 0 0 96 92 58 rQNQQQQQQQQQQQQQQQKQQQ
33 33 A T S S+ 0 0 127 33 73 sN.N...........N......
34 34 A Q + 0 0 143 58 74 SGGG.........Q.G...Q..
35 35 A M S S- 0 0 131 90 101 QSSSQQQQQQQQQQQSQQ.QQQ
36 36 A N S S+ 0 0 130 92 61 QNNNQQQQQQQQQQQNQQQRQQ
37 37 A P - 0 0 71 93 88 PGGGRRRRRRRRRRRGRRSERR
38 38 A E > - 0 0 89 93 56 ESSSEEEEEEEEEEESEEEAEE
39 39 A P T 3 S+ 0 0 87 93 73 GSTTGGGGGGGGGGGTGGGGGV
40 40 A D T > S+ 0 0 114 93 67 PEEEPPPPPPPKPPPEPPPPPE
41 41 A V T < + 0 0 46 93 85 DTTTEEEEEEEEEEETEEDEEM
42 42 A L T 3 + 0 0 58 93 108 GRRRGGGGGGGGGGGRGGGGGG
43 43 A R S < S+ 0 0 57 93 88 STTTCCCCCCCCCCCTCCACCC
44 44 A N E -A 90 0A 38 93 3 NNNNNNNNNNNNNNNNNNNNNN
45 45 A L E -AB 89 118A 0 93 0 LLLLLLLLLLLLLLLLLLLLLL
46 46 A M E -AB 88 117A 57 93 50 FIIIFFFFFFFFFFFIFFFFFF
47 47 A V E +AB 87 116A 0 93 17 IVVVIIIIIIIIIIIVIIIIII
48 48 A N E + B 0 115A 45 93 72 YNNNYYYYYYYYYYYNYYYYYY
49 49 A Y S S+ 0 0 97 93 55 HYYYHHHHHHHHHHHYHHHHHH
50 50 A I - 0 0 41 93 20 LLLLLLLLLLLLLLLLLLLLLL
51 51 A P S > S+ 0 0 56 93 0 PPPPPPPPPPPPPPPPPPPPPP
52 52 A T T 3 S+ 0 0 97 93 55 QQQQQQQQQQQQQQQQQQQQQQ
53 53 A T T 3 S+ 0 0 73 93 65 ETTTEEEEEEEEEEETEEEEEE
54 54 A V < - 0 0 5 93 59 FMMMFFFFFFFFFFFMFFFFFL
55 55 A D > - 0 0 74 93 62 NTTTGGGGGGGGGGGTGGTGGG
56 56 A E H > S+ 0 0 95 93 26 DEEEDDDDDDDDDDDEDDDDDD
57 57 A V H > S+ 0 0 91 93 83 QDDDAAAAAGAAATGDAAPGSA
58 58 A Q H > S+ 0 0 106 93 29 AEEEEEEEEEEEEEEEEEDEEE
59 59 A L H X>S+ 0 0 18 93 26 LIIILLLLLLLLLLLILLLLLL
60 60 A R H X5S+ 0 0 115 93 81 ARRRMMMMMMMMMTMRMMSMMM
61 61 A Q H X5S+ 0 0 127 93 66 ASSSQQQQQQQQQQQSQQQQQQ
62 62 A L H X5S+ 0 0 26 93 21 TLLLMMMMMMMMMMMLVMMMMM
63 63 A F H >X5S+ 0 0 1 93 0 FFFFFFFFFFFFFFFFFFFFFF
64 64 A E H 3<> -C 82 0A 35 93 3 DDDDDDDDDDDDDDDDDDDDDD
78 78 A R T 45S+ 0 0 200 93 41 KKKKRRRRRRRRRRRKRRKRRR
79 79 A E T 45S+ 0 0 158 93 76 MsssAAAAAAAAAAAsAAQAAA
80 80 A T T 45S- 0 0 100 93 47 TkkkTTTTTTTTTTTkTTTTTT
81 81 A R T <5 + 0 0 201 93 75 GGGGNNNNNNNNNNNGNNNNNN
82 82 A Q E < - C 0 77A 129 93 23 QQQQQQQQQQQQQQQQQQLQQQ
83 83 A S E S+ 0 0A 68 93 0 SSSSSSSSSSSSSSSSSSSSSS
84 84 A R E + 0 0A 99 93 90 KLLLKKKKKKKKKKKLKKKKKK
85 85 A G E S- 0 0A 24 93 57 CGGGCCCCCCCCCCCGCCCCCC
86 86 A Y E - C 0 75A 85 93 4 FYYYFFFFFFFFFFFYFFFFFF
87 87 A G E -AC 47 74A 0 93 0 GGGGGGGGGGGGGGGGGGGGGG
88 88 A F E -AC 46 73A 40 93 0 FFFFFFFFFFFFFFFFFFFFFF
89 89 A V E -AC 45 72A 1 93 0 VVVVVVVVVVVVVVVVVVVVVV
90 90 A K E -AC 44 71A 63 93 70 SNNNSSSSSSSSSSSNSSSSSS
91 91 A F E - C 0 69A 0 93 6 YYYYFFFFFFFFFFFYFFYFFF
92 92 A Q S S+ 0 0 102 93 87 DVVVDDDDDDDDDDDVDDDDDD
93 93 A S S >> S- 0 0 71 93 80 NRRRNNNNNNNNNNNRNNSNNN
94 94 A G H >> S+ 0 0 16 93 48 PPPPPPPPPPPPPPPPPPPPPP
95 95 A S H 3> S+ 0 0 100 93 78 AQQQAAAAAGAAAAGQAASGAA
96 96 A S H X> S+ 0 0 17 93 53 SDDDSSSSSSSSSSSDSSSSSS
97 97 A A H S+ 0 0 0 93 0 AAAAAAAAAAAAAAAAAAAAAA
101 101 A I H <5S+ 0 0 57 93 15 IVVVIIIIIIIIIIIVIIIIII
102 102 A A H <5S+ 0 0 83 93 70 TNNNQQQQQQQQQQQNQQQQQQ
103 103 A G H <5S+ 0 0 22 93 79 AVVVAAAAASAAAASVAAASSA
104 104 A L T ><5S+ 0 0 0 93 9 MLLLMMMMMMMMMMMLMMMMMM
105 105 A N T 3